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Amino acid biosynthesis

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created	[InstanceEdit:5655123] Amarasinghe, Vindhya, 2014-12-04
dbId	5655122
displayName	Amino acid biosynthesis
eventOf	[Pathway:R-OSA-2744343] Amino acid metabolism - Oryza sativa
goBiologicalProcess	[GO_BiologicalProcess:8832] amino acid biosynthetic process
hasDiagram	true
hasEvent	[Pathway:R-OSA-1119330] Alanine biosynthesis II - Oryza sativa [Pathway:R-OSA-1119319] Alanine biosynthesis III - Oryza sativa [Pathway:R-OSA-1119567] Beta-alanine biosynthesis I - Oryza sativa [Pathway:R-OSA-1119445] Beta-alanine biosynthesis II - Oryza sativa [Pathway:R-OSA-1119297] Beta-alanine biosynthesis III - Oryza sativa [Pathway:R-OSA-1119528] Beta-alanine betaine biosynthesis - Oryza sativa [Pathway:R-OSA-1119263] Arginine biosynthesis - Oryza sativa [Pathway:R-OSA-1119622] Arginine biosynthesis II (acetyl cycle) - Oryza sativa [Pathway:R-OSA-1119289] Arginine degradation - Oryza sativa [Pathway:R-OSA-1119553] Asparagine biosynthesis - Oryza sativa [Pathway:R-OSA-1119354] Asparagine biosynthesis III - Oryza sativa [Pathway:R-OSA-1119281] Aspartate biosynthesis I - Oryza sativa [Pathway:R-OSA-1119444] Canavanine biosynthesis - Oryza sativa [Pathway:R-OSA-1119495] Citrulline biosynthesis - Oryza sativa [Pathway:R-OSA-1119331] Cysteine biosynthesis I - Oryza sativa [Pathway:R-OSA-1119596] Glutamate biosynthesis I - Oryza sativa [Pathway:R-OSA-1119535] Glutamate biosynthesis IV - Oryza sativa [Pathway:R-OSA-1119420] Glutamate biosynthesis V - Oryza sativa [Pathway:R-OSA-1119293] Glutamine biosynthesis I - Oryza sativa [Pathway:R-OSA-1119311] Glycine biosynthesis I - Oryza sativa [Pathway:R-OSA-1119509] Histidine biosynthesis I - Oryza sativa [Pathway:R-OSA-1119450] Homocysteine biosynthesis - Oryza sativa [Pathway:R-OSA-1119524] Homomethionine biosynthesis - Oryza sativa [Pathway:R-OSA-1119295] Homoserine biosynthesis - Oryza sativa [Pathway:R-OSA-1119460] Isoleucine biosynthesis from threonine - Oryza sativa [Pathway:R-OSA-1119540] Leucine biosynthesis - Oryza sativa [Pathway:R-OSA-1119273] Lysine biosynthesis I - Oryza sativa [Pathway:R-OSA-1119283] Lysine biosynthesis II - Oryza sativa [Pathway:R-OSA-1119419] Lysine biosynthesis VI - Oryza sativa [Pathway:R-OSA-1119400] Methionine biosynthesis II - Oryza sativa [Pathway:R-OSA-1119539] Ornithine biosynthesis - Oryza sativa [Pathway:R-OSA-1119389] Phenylalanine biosynthesis I - Oryza sativa [Pathway:R-OSA-1119494] Tryptophan biosynthesis - Oryza sativa [Pathway:R-OSA-1119631] Proline biosynthesis I - Oryza sativa [Pathway:R-OSA-1119318] Proline biosynthesis V (from arginine) - Oryza sativa [Pathway:R-OSA-1119262] Threonine biosynthesis from homoserine - Oryza sativa [Pathway:R-OSA-1119600] Valine biosynthesis - Oryza sativa [Pathway:R-OSA-1119430] Chorismate biosynthesis - Oryza sativa [Pathway:R-OSA-1119579] Glycine betaine biosynthesis III - Oryza sativa
isInDisease	false
isInferred	false
modified	[InstanceEdit:11540225] Elser, Justin, 2025-03-27
name	Amino acid biosynthesis
orthologousEvent	[Pathway:R-AUM-5655122] Amino acid biosynthesis - Aegilops umbellulata [Pathway:R-OPU-5655122] Amino acid biosynthesis - Oryza punctata [Pathway:R-PSO-5655122] Amino acid biosynthesis - Papaver somniferum [Pathway:R-OBA-5655122] Amino acid biosynthesis - Oryza barthii [Pathway:R-HLH-5655122] Amino acid biosynthesis - Humulus lupulus [Pathway:R-PTI-5655122] Amino acid biosynthesis - Populus trichocarpa [Pathway:R-ECU-5655122] Amino acid biosynthesis - Eragrostis curvula [Pathway:R-CAN-5655122] Amino acid biosynthesis - Capsicum annuum [Pathway:R-ATR-5655122] Amino acid biosynthesis - Amborella trichopoda [Pathway:R-BNA-5655122] Amino acid biosynthesis - Brassica napus [Pathway:R-OAU-5655122] Amino acid biosynthesis - Oryza australiensis [Pathway:R-NNU-5655122] Amino acid biosynthesis - Nelumbo nucifera [Pathway:R-SIN-5655122] Amino acid biosynthesis - Sesamum indicum [Pathway:R-BOL-5655122] Amino acid biosynthesis - Brassica oleracea [Pathway:R-ATA-5655122] Amino acid biosynthesis - Aegilops tauschii [Pathway:R-OLO-5655122] Amino acid biosynthesis - Oryza longistaminata [Pathway:R-GRA-5655122] Amino acid biosynthesis - Gossypium raimondii [Pathway:R-DEX-5655122] Amino acid biosynthesis - Digitaria exilis [Pathway:R-OME-5655122] Amino acid biosynthesis - Oryza meridionalis [Pathway:R-TPR-5655122] Amino acid biosynthesis - Trifolium pratense [Pathway:R-OGR-5655122] Amino acid biosynthesis - Oryza meyeriana var. granulata [Pathway:R-SVI-5655122] Amino acid biosynthesis - Setaria viridis [Pathway:R-LPR-5655122] Amino acid biosynthesis - Lolium perenne [Pathway:R-OMI-5655122] Amino acid biosynthesis - Oryza minuta [Pathway:R-CCL-5655122] Amino acid biosynthesis - Citrus clementina [Pathway:R-SIT-5655122] Amino acid biosynthesis - Setaria italica [Pathway:R-DRO-5655122] Amino acid biosynthesis - Dioscorea rotundata [Pathway:R-OSI-5655122] Amino acid biosynthesis - Oryza sativa Indica Group [Pathway:R-PSA-5655122] Amino acid biosynthesis - Pisum sativum [Pathway:R-TSP-5655122] Amino acid biosynthesis - Triticum spelta subsp. spelta [Pathway:R-VVN-5655122] Amino acid biosynthesis - Vitis vinifera [Pathway:R-ALY-5655122] Amino acid biosynthesis - Arabidopsis lyrata [Pathway:R-ACO-5655122] Amino acid biosynthesis - Ananas comosus [Pathway:R-CCD-5655122] Amino acid biosynthesis - Cynara cardunculus var. scolymus [Pathway:R-CRU-5655122] Amino acid biosynthesis - Capsella rubella [Pathway:R-OKA-5655122] Amino acid biosynthesis - Oryza sativa aus subgroup [Pathway:R-MTR-5655122] Amino acid biosynthesis - Medicago truncatula [Pathway:R-CRE-5655122] Amino acid biosynthesis - Chlamydomonas reinhardtii [Pathway:R-CCI-5655122] Amino acid biosynthesis - Corymbia citriodora [Pathway:R-PPA-5655122] Amino acid biosynthesis - Physcomitrella patens [Pathway:R-PVE-5655122] Amino acid biosynthesis - Pistacia vera [Pathway:R-CQI-5655122] Amino acid biosynthesis - Chenopodium quinoa [Pathway:R-MDO-5655122] Amino acid biosynthesis - Malus domestica [Pathway:R-PVU-5655122] Amino acid biosynthesis - Phaseolus vulgaris [Pathway:R-JCU-5655122] Amino acid biosynthesis - Jatropha curcas [Pathway:R-PAB-5655122] Amino acid biosynthesis - Picea abies [Pathway:R-OBR-5655122] Amino acid biosynthesis - Oryza brachyantha [Pathway:R-JRE-5655122] Amino acid biosynthesis - Juglans regia [Pathway:R-BRA-5655122] Amino acid biosynthesis - Brassica rapa [Pathway:R-CSK-5655122] Amino acid biosynthesis - Cannabis sativa subsp. indica [Pathway:R-VFA-5655122] Amino acid biosynthesis - Vicia faba var. faba [Pathway:R-PHA-5655122] Amino acid biosynthesis - Panicum hallii ("FIL2") [Pathway:R-PAV-5655122] Amino acid biosynthesis - Prunus avium [Pathway:R-LST-5655122] Amino acid biosynthesis - Lathyrus sativus [Pathway:R-CSC-5655122] Amino acid biosynthesis - Cannabis sativa [Pathway:R-PED-5655122] Amino acid biosynthesis - Phyllostachys edulis [Pathway:R-EGR-5655122] Amino acid biosynthesis - Eucalyptus grandis [Pathway:R-BJU-5655122] Amino acid biosynthesis - Brassica juncea [Pathway:R-MAC-5655122] Amino acid biosynthesis - Musa acuminata [Pathway:R-CCN-5655122] Amino acid biosynthesis - Coffea canephora [Pathway:R-CAR-5655122] Amino acid biosynthesis - Cicer arietinum [Pathway:R-CLA-5655122] Amino acid biosynthesis - Citrullus lanatus [Pathway:R-AHY-5655122] Amino acid biosynthesis - Arachis hypogaea [Pathway:R-QLO-5655122] Amino acid biosynthesis - Quercus lobata [Pathway:R-CME-5655122] Amino acid biosynthesis - Cyanidioschyzon merolae [Pathway:R-MES-5655122] Amino acid biosynthesis - Manihot esculenta [Pathway:R-ECG-5655122] Amino acid biosynthesis - Echinochloa crus-galli [Pathway:R-ASA-5655122] Amino acid biosynthesis - Avena sativa [Pathway:R-ITR-5655122] Amino acid biosynthesis - Ipomoea triloba [Pathway:R-LSA-5655122] Amino acid biosynthesis - Lactuca sativa [Pathway:R-ORU-5655122] Amino acid biosynthesis - Oryza rufipogon [Pathway:R-LPE-5655122] Amino acid biosynthesis - Leersia perrieri [Pathway:R-SPC-5655122] Amino acid biosynthesis - Synechocystis sp. PCC 6803 [Pathway:R-SLY-5655122] Amino acid biosynthesis - Solanum lycopersicum [Pathway:R-SHI-5655122] Amino acid biosynthesis - Salvia hispanica [Pathway:R-PHH-5655122] Amino acid biosynthesis - Panicum hallii var. hallii ("HAL2") [Pathway:R-OGU-5655122] Amino acid biosynthesis - Oryza glumaepatula [Pathway:R-VAN-5655122] Amino acid biosynthesis - Vigna angularis [Pathway:R-CCR-5655122] Amino acid biosynthesis - Chondrus crispus [Pathway:R-ZJA-5655122] Amino acid biosynthesis - Zoysia japonica [Pathway:R-ZMY-5655122] Amino acid biosynthesis - Zea mays ver5 [Pathway:R-NAT-5655122] Amino acid biosynthesis - Nicotiana attenuata [Pathway:R-FEX-5655122] Amino acid biosynthesis - Fraxinus excelsior (European ash) [Pathway:R-BVU-5655122] Amino acid biosynthesis - Beta vulgaris [Pathway:R-ACH-5655122] Amino acid biosynthesis - Actinidia chinensis [Pathway:R-BDI-5655122] Amino acid biosynthesis - Brachypodium distachyon [Pathway:R-SMO-5655122] Amino acid biosynthesis - Selaginella moellendorffii [Pathway:R-SSP-5655122] Amino acid biosynthesis - Saccharum spontaneum [Pathway:R-TDI-5655122] Amino acid biosynthesis - Triticum dicoccoides [Pathway:R-OEU-5655122] Amino acid biosynthesis - Olea europaea [Pathway:R-RCH-5655122] Amino acid biosynthesis - Rosa chinensis [Pathway:R-CCP-5655122] Amino acid biosynthesis - Corchorus capsularis [Pathway:R-QSU-5655122] Amino acid biosynthesis - Quercus suber [Pathway:R-AOF-5655122] Amino acid biosynthesis - Asparagus officinalis [Pathway:R-HAN-5655122] Amino acid biosynthesis - Helianthus annuus [Pathway:R-TCA-5655122] Amino acid biosynthesis - Theobroma cacao [Pathway:R-GSU-5655122] Amino acid biosynthesis - Galdieria sulphuraria [Pathway:R-CST-5655122] Amino acid biosynthesis - Camelina sativa [Pathway:R-HLP-5655122] Amino acid biosynthesis - Humulus lupulus var. lupulus [Pathway:R-TUR-5655122] Amino acid biosynthesis - Triticum urartu [Pathway:R-FVE-5655122] Amino acid biosynthesis - Fragaria vesca [Pathway:R-AIP-5655122] Amino acid biosynthesis - Arachis ipaensis [Pathway:R-PTA-5655122] Amino acid biosynthesis - Pinus taeda [Pathway:R-AHA-5655122] Amino acid biosynthesis - Arabidopsis halleri [Pathway:R-TTI-5655122] Amino acid biosynthesis - Triticum timopheevii subsp. timopheevii [Pathway:R-COL-5655122] Amino acid biosynthesis - Corchorus olitorius [Pathway:R-HVU-5655122] Amino acid biosynthesis - Hordeum vulgare [Pathway:R-GMA-5655122] Amino acid biosynthesis - Glycine max [Pathway:R-OES-5655122] Amino acid biosynthesis - Olea europaea var. sylvestris [Pathway:R-ZMA-5655122] Amino acid biosynthesis - Zea mays [Pathway:R-FCR-5655122] Amino acid biosynthesis - Ficus carica [Pathway:R-GSO-5655122] Amino acid biosynthesis - Glycine soja [Pathway:R-LAN-5655122] Amino acid biosynthesis - Lupinus angustifolius [Pathway:R-MGU-5655122] Amino acid biosynthesis - Erythranthe guttata [Pathway:R-ONI-5655122] Amino acid biosynthesis - Oryza nivara [Pathway:R-OLU-5655122] Amino acid biosynthesis - Ostreococcus lucimarinus [Pathway:R-SBI-5655122] Amino acid biosynthesis - Sorghum bicolor [Pathway:R-TAE-5655122] Amino acid biosynthesis - Triticum aestivum [Pathway:R-NCO-5655122] Amino acid biosynthesis - Nymphaea colorata [Pathway:R-ETE-5655122] Amino acid biosynthesis - Eragrostis tef [Pathway:R-OOF-5655122] Amino acid biosynthesis - Oryza officinalis [Pathway:R-CCA-5655122] Amino acid biosynthesis - Cajanus cajan [Pathway:R-ADU-5655122] Amino acid biosynthesis - Arachis duranensis [Pathway:R-STU-5655122] Amino acid biosynthesis - Solanum tuberosum [Pathway:R-SCR-5655122] Amino acid biosynthesis - Secale cereale [Pathway:R-CML-5655122] Amino acid biosynthesis - Cucumis melo [Pathway:R-PDA-5655122] Amino acid biosynthesis - Phoenix dactylifera [Pathway:R-MPO-5655122] Amino acid biosynthesis - Marchantia polymorpha [Pathway:R-DCA-5655122] Amino acid biosynthesis - Daucus carota [Pathway:R-CSI-5655122] Amino acid biosynthesis - Citrus sinensis [Pathway:R-CSA-5655122] Amino acid biosynthesis - Cucumis sativus [Pathway:R-ATH-5655122] Amino acid biosynthesis - Arabidopsis thaliana [Pathway:R-VRA-5655122] Amino acid biosynthesis - Vigna radiata [Pathway:R-VUN-5655122] Amino acid biosynthesis - Vigna unguiculata [Pathway:R-PPE-5655122] Amino acid biosynthesis - Prunus persica [Pathway:R-OGL-5655122] Amino acid biosynthesis - Oryza glaberrima [Pathway:R-CBA-5655122] Amino acid biosynthesis - Chara braunii [Pathway:R-TTU-5655122] Amino acid biosynthesis - Triticum turgidum
schemaClass	Pathway
species	[Species:186860] Oryza sativa
stId	R-OSA-5655122

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(hasEvent)

[Pathway:R-OSA-2744343] Amino acid metabolism - Oryza sativa

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