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Lysine biosynthesis VI

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compartment	[Compartment:1141] plastid stroma
created	[InstanceEdit:1164949] Wu, Guanming, 2010-12-11
crossReference	[DatabaseIdentifier:1148285] RiceCyc:PWY-5097
dbId	1119419
displayName	Lysine biosynthesis VI
edited	[InstanceEdit:2881393] Amoss, Kindra, 2012-12-20 [InstanceEdit:2881395] Dharmawardhana, DP, 2012-12-20
eventOf	[Pathway:R-OSA-5655122] Amino acid biosynthesis - Oryza sativa
goBiologicalProcess	[GO_BiologicalProcess:14633] lysine biosynthetic process via diaminopimelate
hasDiagram	true
hasEvent	[Reaction:R-OSA-5606509] aspartate kinase plastidic - Oryza sativa [Reaction:R-OSA-5606504] aspartate-semialdehyde dehydrogenase plastidic - Oryza sativa [Reaction:R-OSA-5606488] dihydrodipicolinate synthase plastidic - Oryza sativa [Reaction:R-OSA-5606507] dihydrodipicolinate reductase plastidic - Oryza sativa [Reaction:R-OSA-5606520] diaminopimelate aminotransferase plastidic - Oryza sativa [Reaction:R-OSA-5606486] diaminopimelate epimerase plastidic - Oryza sativa [Reaction:R-OSA-5606481] diaminopimelate decarboxylase plastidic - Oryza sativa
isInDisease	false
isInferred	false
modified	[InstanceEdit:11540225] Elser, Justin, 2025-03-27
name	Lysine biosynthesis VI pathway101921
orthologousEvent	[Pathway:R-ACH-1119419] Lysine biosynthesis VI - Actinidia chinensis [Pathway:R-OLO-1119419] Lysine biosynthesis VI - Oryza longistaminata [Pathway:R-SLY-1119419] Lysine biosynthesis VI - Solanum lycopersicum [Pathway:R-ECG-1119419] Lysine biosynthesis VI - Echinochloa crus-galli [Pathway:R-BOL-1119419] Lysine biosynthesis VI - Brassica oleracea [Pathway:R-ATR-1119419] Lysine biosynthesis VI - Amborella trichopoda [Pathway:R-OKA-1119419] Lysine biosynthesis VI - Oryza sativa aus subgroup [Pathway:R-DEX-1119419] Lysine biosynthesis VI - Digitaria exilis [Pathway:R-ORU-1119419] Lysine biosynthesis VI - Oryza rufipogon [Pathway:R-CST-1119419] Lysine biosynthesis VI - Camelina sativa [Pathway:R-TUR-1119419] Lysine biosynthesis VI - Triticum urartu [Pathway:R-SIN-1119419] Lysine biosynthesis VI - Sesamum indicum [Pathway:R-BVU-1119419] Lysine biosynthesis VI - Beta vulgaris [Pathway:R-CBA-1119419] Lysine biosynthesis VI - Chara braunii [Pathway:R-ACO-1119419] Lysine biosynthesis VI - Ananas comosus [Pathway:R-PHH-1119419] Lysine biosynthesis VI - Panicum hallii var. hallii ("HAL2") [Pathway:R-TAE-1119419] Lysine biosynthesis VI - Triticum aestivum [Pathway:R-SHI-1119419] Lysine biosynthesis VI - Salvia hispanica [Pathway:R-VUN-1119419] Lysine biosynthesis VI - Vigna unguiculata [Pathway:R-OAU-1119419] Lysine biosynthesis VI - Oryza australiensis [Pathway:R-QSU-1119419] Lysine biosynthesis VI - Quercus suber [Pathway:R-PHA-1119419] Lysine biosynthesis VI - Panicum hallii ("FIL2") [Pathway:R-MGU-1119419] Lysine biosynthesis VI - Erythranthe guttata [Pathway:R-ASA-1119419] Lysine biosynthesis VI - Avena sativa [Pathway:R-SCR-1119419] Lysine biosynthesis VI - Secale cereale [Pathway:R-SMO-1119419] Lysine biosynthesis VI - Selaginella moellendorffii [Pathway:R-CSC-1119419] Lysine biosynthesis VI - Cannabis sativa [Pathway:R-CAN-1119419] Lysine biosynthesis VI - Capsicum annuum [Pathway:R-PPA-1119419] Lysine biosynthesis VI - Physcomitrella patens [Pathway:R-GMA-1119419] Lysine biosynthesis VI - Glycine max [Pathway:R-VFA-1119419] Lysine biosynthesis VI - Vicia faba var. faba [Pathway:R-OMI-1119419] Lysine biosynthesis VI - Oryza minuta [Pathway:R-STU-1119419] Lysine biosynthesis VI - Solanum tuberosum [Pathway:R-CCA-1119419] Lysine biosynthesis VI - Cajanus cajan [Pathway:R-LPR-1119419] Lysine biosynthesis VI - Lolium perenne [Pathway:R-GSO-1119419] Lysine biosynthesis VI - Glycine soja [Pathway:R-OGR-1119419] Lysine biosynthesis VI - Oryza meyeriana var. granulata [Pathway:R-MPO-1119419] Lysine biosynthesis VI - Marchantia polymorpha [Pathway:R-CCD-1119419] Lysine biosynthesis VI - Cynara cardunculus var. scolymus [Pathway:R-TPR-1119419] Lysine biosynthesis VI - Trifolium pratense [Pathway:R-PVU-1119419] Lysine biosynthesis VI - Phaseolus vulgaris [Pathway:R-CQI-1119419] Lysine biosynthesis VI - Chenopodium quinoa [Pathway:R-TTU-1119419] Lysine biosynthesis VI - Triticum turgidum [Pathway:R-HLH-1119419] Lysine biosynthesis VI - Humulus lupulus [Pathway:R-AHA-1119419] Lysine biosynthesis VI - Arabidopsis halleri [Pathway:R-VRA-1119419] Lysine biosynthesis VI - Vigna radiata [Pathway:R-TDI-1119419] Lysine biosynthesis VI - Triticum dicoccoides [Pathway:R-OOF-1119419] Lysine biosynthesis VI - Oryza officinalis [Pathway:R-CAR-1119419] Lysine biosynthesis VI - Cicer arietinum [Pathway:R-PED-1119419] Lysine biosynthesis VI - Phyllostachys edulis [Pathway:R-RCH-1119419] Lysine biosynthesis VI - Rosa chinensis [Pathway:R-SBI-1119419] Lysine biosynthesis VI - Sorghum bicolor [Pathway:R-TSP-1119419] Lysine biosynthesis VI - Triticum spelta subsp. spelta [Pathway:R-COL-1119419] Lysine biosynthesis VI - Corchorus olitorius [Pathway:R-MDO-1119419] Lysine biosynthesis VI - Malus domestica [Pathway:R-OSI-1119419] Lysine biosynthesis VI - Oryza sativa Indica Group [Pathway:R-CCL-1119419] Lysine biosynthesis VI - Citrus clementina [Pathway:R-LST-1119419] Lysine biosynthesis VI - Lathyrus sativus [Pathway:R-FVE-1119419] Lysine biosynthesis VI - Fragaria vesca [Pathway:R-MAC-1119419] Lysine biosynthesis VI - Musa acuminata [Pathway:R-BJU-1119419] Lysine biosynthesis VI - Brassica juncea [Pathway:R-ALY-1119419] Lysine biosynthesis VI - Arabidopsis lyrata [Pathway:R-SIT-1119419] Lysine biosynthesis VI - Setaria italica [Pathway:R-VVN-1119419] Lysine biosynthesis VI - Vitis vinifera [Pathway:R-OES-1119419] Lysine biosynthesis VI - Olea europaea var. sylvestris [Pathway:R-PVE-1119419] Lysine biosynthesis VI - Pistacia vera [Pathway:R-AOF-1119419] Lysine biosynthesis VI - Asparagus officinalis [Pathway:R-MTR-1119419] Lysine biosynthesis VI - Medicago truncatula [Pathway:R-BNA-1119419] Lysine biosynthesis VI - Brassica napus [Pathway:R-TCA-1119419] Lysine biosynthesis VI - Theobroma cacao [Pathway:R-PSO-1119419] Lysine biosynthesis VI - Papaver somniferum [Pathway:R-OEU-1119419] Lysine biosynthesis VI - Olea europaea [Pathway:R-NAT-1119419] Lysine biosynthesis VI - Nicotiana attenuata [Pathway:R-FEX-1119419] Lysine biosynthesis VI - Fraxinus excelsior (European ash) [Pathway:R-OME-1119419] Lysine biosynthesis VI - Oryza meridionalis [Pathway:R-ZJA-1119419] Lysine biosynthesis VI - Zoysia japonica [Pathway:R-PTI-1119419] Lysine biosynthesis VI - Populus trichocarpa [Pathway:R-AUM-1119419] Lysine biosynthesis VI - Aegilops umbellulata [Pathway:R-SSP-1119419] Lysine biosynthesis VI - Saccharum spontaneum [Pathway:R-CLA-1119419] Lysine biosynthesis VI - Citrullus lanatus [Pathway:R-DCA-1119419] Lysine biosynthesis VI - Daucus carota [Pathway:R-ATA-1119419] Lysine biosynthesis VI - Aegilops tauschii [Pathway:R-CME-1119419] Lysine biosynthesis VI - Cyanidioschyzon merolae [Pathway:R-OBA-1119419] Lysine biosynthesis VI - Oryza barthii [Pathway:R-LSA-1119419] Lysine biosynthesis VI - Lactuca sativa [Pathway:R-GRA-1119419] Lysine biosynthesis VI - Gossypium raimondii [Pathway:R-DRO-1119419] Lysine biosynthesis VI - Dioscorea rotundata [Pathway:R-ATH-1119419] Lysine biosynthesis VI - Arabidopsis thaliana [Pathway:R-PPE-1119419] Lysine biosynthesis VI - Prunus persica [Pathway:R-ECU-1119419] Lysine biosynthesis VI - Eragrostis curvula [Pathway:R-OGU-1119419] Lysine biosynthesis VI - Oryza glumaepatula [Pathway:R-CCR-1119419] Lysine biosynthesis VI - Chondrus crispus [Pathway:R-LPE-1119419] Lysine biosynthesis VI - Leersia perrieri [Pathway:R-OLU-1119419] Lysine biosynthesis VI - Ostreococcus lucimarinus [Pathway:R-AHY-1119419] Lysine biosynthesis VI - Arachis hypogaea [Pathway:R-QLO-1119419] Lysine biosynthesis VI - Quercus lobata [Pathway:R-ITR-1119419] Lysine biosynthesis VI - Ipomoea triloba [Pathway:R-OBR-1119419] Lysine biosynthesis VI - Oryza brachyantha [Pathway:R-MES-1119419] Lysine biosynthesis VI - Manihot esculenta [Pathway:R-VAN-1119419] Lysine biosynthesis VI - Vigna angularis [Pathway:R-CSA-1119419] Lysine biosynthesis VI - Cucumis sativus [Pathway:R-OGL-1119419] Lysine biosynthesis VI - Oryza glaberrima [Pathway:R-JRE-1119419] Lysine biosynthesis VI - Juglans regia [Pathway:R-ADU-1119419] Lysine biosynthesis VI - Arachis duranensis [Pathway:R-EGR-1119419] Lysine biosynthesis VI - Eucalyptus grandis [Pathway:R-CSI-1119419] Lysine biosynthesis VI - Citrus sinensis [Pathway:R-CML-1119419] Lysine biosynthesis VI - Cucumis melo [Pathway:R-BDI-1119419] Lysine biosynthesis VI - Brachypodium distachyon [Pathway:R-CCN-1119419] Lysine biosynthesis VI - Coffea canephora [Pathway:R-ZMA-1119419] Lysine biosynthesis VI - Zea mays [Pathway:R-PDA-1119419] Lysine biosynthesis VI - Phoenix dactylifera [Pathway:R-GSU-1119419] Lysine biosynthesis VI - Galdieria sulphuraria [Pathway:R-HAN-1119419] Lysine biosynthesis VI - Helianthus annuus [Pathway:R-CCI-1119419] Lysine biosynthesis VI - Corymbia citriodora [Pathway:R-CRE-1119419] Lysine biosynthesis VI - Chlamydomonas reinhardtii [Pathway:R-LAN-1119419] Lysine biosynthesis VI - Lupinus angustifolius [Pathway:R-FCR-1119419] Lysine biosynthesis VI - Ficus carica [Pathway:R-NCO-1119419] Lysine biosynthesis VI - Nymphaea colorata [Pathway:R-PAB-1119419] Lysine biosynthesis VI - Picea abies [Pathway:R-TTI-1119419] Lysine biosynthesis VI - Triticum timopheevii subsp. timopheevii [Pathway:R-PSA-1119419] Lysine biosynthesis VI - Pisum sativum [Pathway:R-ZMY-1119419] Lysine biosynthesis VI - Zea mays ver5 [Pathway:R-NNU-1119419] Lysine biosynthesis VI - Nelumbo nucifera [Pathway:R-OPU-1119419] Lysine biosynthesis VI - Oryza punctata [Pathway:R-SVI-1119419] Lysine biosynthesis VI - Setaria viridis [Pathway:R-HVU-1119419] Lysine biosynthesis VI - Hordeum vulgare [Pathway:R-AIP-1119419] Lysine biosynthesis VI - Arachis ipaensis [Pathway:R-HLP-1119419] Lysine biosynthesis VI - Humulus lupulus var. lupulus [Pathway:R-PTA-1119419] Lysine biosynthesis VI - Pinus taeda [Pathway:R-CCP-1119419] Lysine biosynthesis VI - Corchorus capsularis [Pathway:R-CRU-1119419] Lysine biosynthesis VI - Capsella rubella [Pathway:R-JCU-1119419] Lysine biosynthesis VI - Jatropha curcas [Pathway:R-SPC-1119419] Lysine biosynthesis VI - Synechocystis sp. PCC 6803 [Pathway:R-BRA-1119419] Lysine biosynthesis VI - Brassica rapa [Pathway:R-ETE-1119419] Lysine biosynthesis VI - Eragrostis tef [Pathway:R-ONI-1119419] Lysine biosynthesis VI - Oryza nivara [Pathway:R-PAV-1119419] Lysine biosynthesis VI - Prunus avium [Pathway:R-CSK-1119419] Lysine biosynthesis VI - Cannabis sativa subsp. indica
revised	[InstanceEdit:2881395] Dharmawardhana, DP, 2012-12-20 [InstanceEdit:5606499] Amarasinghe, Vindhya, 2014-07-01 [InstanceEdit:5606515] Amarasinghe, Vindhya, 2014-07-02
schemaClass	Pathway
species	[Species:186860] Oryza sativa
stId	R-OSA-1119419
summation	[Summation:2881397] lysine biosynthesis VI: In this pathway aspartate kinase (A... [Summation:2850146] Developed by Gramene.org

Referrals

(hasEvent)

[Pathway:R-OSA-5655122] Amino acid biosynthesis - Oryza sativa