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Arginine degradation

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compartment	[Compartment:70101] cytosol [Compartment:5460] mitochondrial matrix
created	[InstanceEdit:1164949] Wu, Guanming, 2010-12-11
crossReference	[DatabaseIdentifier:1148360] RiceCyc:ARG-PRO-PWY
dbId	1119289
displayName	Arginine degradation
edited	[InstanceEdit:5631949] Amarasinghe, Vindhya, 2014-09-23 [InstanceEdit:8986575] Gupta, Parul, 2017-04-28
eventOf	[Pathway:R-OSA-5655122] Amino acid biosynthesis - Oryza sativa
goBiologicalProcess	[GO_BiologicalProcess:78126] arginine catabolic process to proline via ornithine
hasDiagram	true
hasEvent	[Reaction:R-OSA-5631974] Conversion of arginine to ornithine - Oryza sativa [Reaction:R-OSA-5631977] Conversion of ornithine to glutamate g-semialdehyde - Oryza sativa [Reaction:R-OSA-5631967] Conversion of glutamate g-semialdehyde to P5C - Oryza sativa [Reaction:R-OSA-5631956] Conversion of P5C to L-Pro - Oryza sativa [Reaction:R-OSA-9031496] Conversion of P5C to glutamate - Oryza sativa [BlackBoxEvent:R-OSA-9031495] P5C transport - Oryza sativa
isInDisease	false
isInferred	false
literatureReference	[LiteratureReference:9031502] Pretreatment optimization of Sorghum pioneer biomass for bioethanol production and its scale-up [LiteratureReference:9026258] Functional characterization and expression analysis of rice ?(1)-pyrroline-5-carboxylate dehydrogenase provide new insight into the regulation of proline and arginine catabolism [LiteratureReference:9031507] Physiological implications of arginine metabolism in plants [LiteratureReference:9026256] Role of proline and pyrroline-5-carboxylate metabolism in plant defense against invading pathogens [LiteratureReference:5307559] The role of [Delta]1-pyrroline-5-carboxylate dehydrogenase in proline degradation
modified	[InstanceEdit:11540225] Elser, Justin, 2025-03-27
name	Arginine degradation proline biosynthesis from arginine pathway101835
orthologousEvent	[Pathway:R-PED-1119289] Arginine degradation - Phyllostachys edulis [Pathway:R-CCA-1119289] Arginine degradation - Cajanus cajan [Pathway:R-SIT-1119289] Arginine degradation - Setaria italica [Pathway:R-NCO-1119289] Arginine degradation - Nymphaea colorata [Pathway:R-OMI-1119289] Arginine degradation - Oryza minuta [Pathway:R-GMA-1119289] Arginine degradation - Glycine max [Pathway:R-CRU-1119289] Arginine degradation - Capsella rubella [Pathway:R-BRA-1119289] Arginine degradation - Brassica rapa [Pathway:R-HLP-1119289] Arginine degradation - Humulus lupulus var. lupulus [Pathway:R-ALY-1119289] Arginine degradation - Arabidopsis lyrata [Pathway:R-CCD-1119289] Arginine degradation - Cynara cardunculus var. scolymus [Pathway:R-CCN-1119289] Arginine degradation - Coffea canephora [Pathway:R-COL-1119289] Arginine degradation - Corchorus olitorius [Pathway:R-SHI-1119289] Arginine degradation - Salvia hispanica [Pathway:R-LPE-1119289] Arginine degradation - Leersia perrieri [Pathway:R-TDI-1119289] Arginine degradation - Triticum dicoccoides [Pathway:R-CCP-1119289] Arginine degradation - Corchorus capsularis [Pathway:R-ZMY-1119289] Arginine degradation - Zea mays ver5 [Pathway:R-ONI-1119289] Arginine degradation - Oryza nivara [Pathway:R-MDO-1119289] Arginine degradation - Malus domestica [Pathway:R-ETE-1119289] Arginine degradation - Eragrostis tef [Pathway:R-TAE-1119289] Arginine degradation - Triticum aestivum [Pathway:R-PAB-1119289] Arginine degradation - Picea abies [Pathway:R-CRE-1119289] Arginine degradation - Chlamydomonas reinhardtii [Pathway:R-OBA-1119289] Arginine degradation - Oryza barthii [Pathway:R-NNU-1119289] Arginine degradation - Nelumbo nucifera [Pathway:R-SPC-1119289] Arginine degradation - Synechocystis sp. PCC 6803 [Pathway:R-OSI-1119289] Arginine degradation - Oryza sativa Indica Group [Pathway:R-AIP-1119289] Arginine degradation - Arachis ipaensis [Pathway:R-MAC-1119289] Arginine degradation - Musa acuminata [Pathway:R-HAN-1119289] Arginine degradation - Helianthus annuus [Pathway:R-MPO-1119289] Arginine degradation - Marchantia polymorpha [Pathway:R-SSP-1119289] Arginine degradation - Saccharum spontaneum [Pathway:R-CCL-1119289] Arginine degradation - Citrus clementina [Pathway:R-PSO-1119289] Arginine degradation - Papaver somniferum [Pathway:R-SLY-1119289] Arginine degradation - Solanum lycopersicum [Pathway:R-TUR-1119289] Arginine degradation - Triticum urartu [Pathway:R-ATR-1119289] Arginine degradation - Amborella trichopoda [Pathway:R-ACH-1119289] Arginine degradation - Actinidia chinensis [Pathway:R-MTR-1119289] Arginine degradation - Medicago truncatula [Pathway:R-BNA-1119289] Arginine degradation - Brassica napus [Pathway:R-PAV-1119289] Arginine degradation - Prunus avium [Pathway:R-OPU-1119289] Arginine degradation - Oryza punctata [Pathway:R-PPA-1119289] Arginine degradation - Physcomitrella patens [Pathway:R-SVI-1119289] Arginine degradation - Setaria viridis [Pathway:R-SIN-1119289] Arginine degradation - Sesamum indicum [Pathway:R-HVU-1119289] Arginine degradation - Hordeum vulgare [Pathway:R-PSA-1119289] Arginine degradation - Pisum sativum [Pathway:R-OAU-1119289] Arginine degradation - Oryza australiensis [Pathway:R-ECU-1119289] Arginine degradation - Eragrostis curvula [Pathway:R-CSC-1119289] Arginine degradation - Cannabis sativa [Pathway:R-ASA-1119289] Arginine degradation - Avena sativa [Pathway:R-OLU-1119289] Arginine degradation - Ostreococcus lucimarinus [Pathway:R-CBA-1119289] Arginine degradation - Chara braunii [Pathway:R-OME-1119289] Arginine degradation - Oryza meridionalis [Pathway:R-CML-1119289] Arginine degradation - Cucumis melo [Pathway:R-GSU-1119289] Arginine degradation - Galdieria sulphuraria [Pathway:R-EGR-1119289] Arginine degradation - Eucalyptus grandis [Pathway:R-CSI-1119289] Arginine degradation - Citrus sinensis [Pathway:R-ATA-1119289] Arginine degradation - Aegilops tauschii [Pathway:R-QLO-1119289] Arginine degradation - Quercus lobata [Pathway:R-BDI-1119289] Arginine degradation - Brachypodium distachyon [Pathway:R-PVU-1119289] Arginine degradation - Phaseolus vulgaris [Pathway:R-JRE-1119289] Arginine degradation - Juglans regia [Pathway:R-VFA-1119289] Arginine degradation - Vicia faba var. faba [Pathway:R-CCI-1119289] Arginine degradation - Corymbia citriodora [Pathway:R-VRA-1119289] Arginine degradation - Vigna radiata [Pathway:R-STU-1119289] Arginine degradation - Solanum tuberosum [Pathway:R-ADU-1119289] Arginine degradation - Arachis duranensis [Pathway:R-OBR-1119289] Arginine degradation - Oryza brachyantha [Pathway:R-JCU-1119289] Arginine degradation - Jatropha curcas [Pathway:R-OES-1119289] Arginine degradation - Olea europaea var. sylvestris [Pathway:R-CSK-1119289] Arginine degradation - Cannabis sativa subsp. indica [Pathway:R-FCR-1119289] Arginine degradation - Ficus carica [Pathway:R-LAN-1119289] Arginine degradation - Lupinus angustifolius [Pathway:R-PVE-1119289] Arginine degradation - Pistacia vera [Pathway:R-LPR-1119289] Arginine degradation - Lolium perenne [Pathway:R-TTU-1119289] Arginine degradation - Triticum turgidum [Pathway:R-OGR-1119289] Arginine degradation - Oryza meyeriana var. granulata [Pathway:R-OGU-1119289] Arginine degradation - Oryza glumaepatula [Pathway:R-ZMA-1119289] Arginine degradation - Zea mays [Pathway:R-GSO-1119289] Arginine degradation - Glycine soja [Pathway:R-LST-1119289] Arginine degradation - Lathyrus sativus [Pathway:R-TSP-1119289] Arginine degradation - Triticum spelta subsp. spelta [Pathway:R-TTI-1119289] Arginine degradation - Triticum timopheevii subsp. timopheevii [Pathway:R-PPE-1119289] Arginine degradation - Prunus persica [Pathway:R-PHH-1119289] Arginine degradation - Panicum hallii var. hallii ("HAL2") [Pathway:R-PTA-1119289] Arginine degradation - Pinus taeda [Pathway:R-DCA-1119289] Arginine degradation - Daucus carota [Pathway:R-ATH-1119289] Arginine degradation - Arabidopsis thaliana [Pathway:R-RCH-1119289] Arginine degradation - Rosa chinensis [Pathway:R-CLA-1119289] Arginine degradation - Citrullus lanatus [Pathway:R-VVN-1119289] Arginine degradation - Vitis vinifera [Pathway:R-TPR-1119289] Arginine degradation - Trifolium pratense [Pathway:R-SBI-1119289] Arginine degradation - Sorghum bicolor [Pathway:R-BJU-1119289] Arginine degradation - Brassica juncea [Pathway:R-CQI-1119289] Arginine degradation - Chenopodium quinoa [Pathway:R-PDA-1119289] Arginine degradation - Phoenix dactylifera [Pathway:R-CAN-1119289] Arginine degradation - Capsicum annuum [Pathway:R-TCA-1119289] Arginine degradation - Theobroma cacao [Pathway:R-DEX-1119289] Arginine degradation - Digitaria exilis [Pathway:R-OLO-1119289] Arginine degradation - Oryza longistaminata [Pathway:R-BOL-1119289] Arginine degradation - Brassica oleracea [Pathway:R-ORU-1119289] Arginine degradation - Oryza rufipogon [Pathway:R-AOF-1119289] Arginine degradation - Asparagus officinalis [Pathway:R-ECG-1119289] Arginine degradation - Echinochloa crus-galli [Pathway:R-LSA-1119289] Arginine degradation - Lactuca sativa [Pathway:R-GRA-1119289] Arginine degradation - Gossypium raimondii [Pathway:R-CME-1119289] Arginine degradation - Cyanidioschyzon merolae [Pathway:R-FVE-1119289] Arginine degradation - Fragaria vesca [Pathway:R-AUM-1119289] Arginine degradation - Aegilops umbellulata [Pathway:R-SCR-1119289] Arginine degradation - Secale cereale [Pathway:R-OGL-1119289] Arginine degradation - Oryza glaberrima [Pathway:R-OEU-1119289] Arginine degradation - Olea europaea [Pathway:R-ZJA-1119289] Arginine degradation - Zoysia japonica [Pathway:R-CST-1119289] Arginine degradation - Camelina sativa [Pathway:R-NAT-1119289] Arginine degradation - Nicotiana attenuata [Pathway:R-CCR-1119289] Arginine degradation - Chondrus crispus [Pathway:R-VUN-1119289] Arginine degradation - Vigna unguiculata [Pathway:R-CAR-1119289] Arginine degradation - Cicer arietinum [Pathway:R-VAN-1119289] Arginine degradation - Vigna angularis [Pathway:R-MES-1119289] Arginine degradation - Manihot esculenta [Pathway:R-OOF-1119289] Arginine degradation - Oryza officinalis [Pathway:R-CSA-1119289] Arginine degradation - Cucumis sativus [Pathway:R-ACO-1119289] Arginine degradation - Ananas comosus [Pathway:R-BVU-1119289] Arginine degradation - Beta vulgaris [Pathway:R-MGU-1119289] Arginine degradation - Erythranthe guttata [Pathway:R-DRO-1119289] Arginine degradation - Dioscorea rotundata [Pathway:R-QSU-1119289] Arginine degradation - Quercus suber [Pathway:R-SMO-1119289] Arginine degradation - Selaginella moellendorffii [Pathway:R-ITR-1119289] Arginine degradation - Ipomoea triloba [Pathway:R-PHA-1119289] Arginine degradation - Panicum hallii ("FIL2") [Pathway:R-AHA-1119289] Arginine degradation - Arabidopsis halleri [Pathway:R-FEX-1119289] Arginine degradation - Fraxinus excelsior (European ash) [Pathway:R-PTI-1119289] Arginine degradation - Populus trichocarpa [Pathway:R-AHY-1119289] Arginine degradation - Arachis hypogaea
schemaClass	Pathway
species	[Species:186860] Oryza sativa
stId	R-OSA-1119289
summation	[Summation:5631962] L-arginine is catabolized to L-proline via several enzymatic... [Summation:1119236] Data source: RiceCyc

Referrals

(hasEvent)

[Pathway:R-OSA-5655122] Amino acid biosynthesis - Oryza sativa