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Lysine biosynthesis II

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created	[InstanceEdit:1164949] Wu, Guanming, 2010-12-11
crossReference	[DatabaseIdentifier:1143185] RiceCyc:PWY-2941
dbId	1119283
displayName	Lysine biosynthesis II
edited	[InstanceEdit:2880688] Amoss, Kindra, 2012-12-20 [InstanceEdit:2880691] Dharmawardhana, DP, 2012-12-20
eventOf	[Pathway:R-OSA-5655122] Amino acid biosynthesis - Oryza sativa
goBiologicalProcess	[GO_BiologicalProcess:259887] lysine biosynthetic process via diaminopimelate and L-2-acetamido-6-oxoheptanedioate
hasDiagram	true
hasEvent	[Reaction:R-OSA-1120000] aspartate kinase - Oryza sativa [Reaction:R-OSA-1121609] aspartate-semialdehyde dehydrogenase - Oryza sativa [Reaction:R-OSA-1121629] dihydrodipicolinate synthase - Oryza sativa [Reaction:R-OSA-1120601] dihydrodipicolinate reductase - Oryza sativa [Reaction:R-OSA-1120089] tetrahydrodipicolinate N-acetyltransferase - Oryza sativa [Reaction:R-OSA-1120889] L-2-acetamido-6-oxoheptanedioate+L-glutamate->N-acetyl-L,L-2,6-diaminopimelate+alpha-ketoglutarate - Oryza sativa [Reaction:R-OSA-1120828] N-acetyldiaminopimelate deacetylase - Oryza sativa [Reaction:R-OSA-1120389] diaminopimelate epimerase - Oryza sativa [Reaction:R-OSA-1120622] diaminopimelate decarboxylase - Oryza sativa [Reaction:R-OSA-1121473] dipicolinate synthase - Oryza sativa
isInDisease	false
isInferred	false
modified	[InstanceEdit:11540225] Elser, Justin, 2025-03-27
name	Lysine biosynthesis II pathway101930
orthologousEvent	[Pathway:R-ITR-1119283] Lysine biosynthesis II - Ipomoea triloba [Pathway:R-CML-1119283] Lysine biosynthesis II - Cucumis melo [Pathway:R-VUN-1119283] Lysine biosynthesis II - Vigna unguiculata [Pathway:R-OMI-1119283] Lysine biosynthesis II - Oryza minuta [Pathway:R-SIT-1119283] Lysine biosynthesis II - Setaria italica [Pathway:R-MPO-1119283] Lysine biosynthesis II - Marchantia polymorpha [Pathway:R-AIP-1119283] Lysine biosynthesis II - Arachis ipaensis [Pathway:R-OBR-1119283] Lysine biosynthesis II - Oryza brachyantha [Pathway:R-GMA-1119283] Lysine biosynthesis II - Glycine max [Pathway:R-PVE-1119283] Lysine biosynthesis II - Pistacia vera [Pathway:R-CCD-1119283] Lysine biosynthesis II - Cynara cardunculus var. scolymus [Pathway:R-SBI-1119283] Lysine biosynthesis II - Sorghum bicolor [Pathway:R-STU-1119283] Lysine biosynthesis II - Solanum tuberosum [Pathway:R-GSO-1119283] Lysine biosynthesis II - Glycine soja [Pathway:R-HLP-1119283] Lysine biosynthesis II - Humulus lupulus var. lupulus [Pathway:R-CCN-1119283] Lysine biosynthesis II - Coffea canephora [Pathway:R-OGU-1119283] Lysine biosynthesis II - Oryza glumaepatula [Pathway:R-ZMA-1119283] Lysine biosynthesis II - Zea mays [Pathway:R-CRU-1119283] Lysine biosynthesis II - Capsella rubella [Pathway:R-GRA-1119283] Lysine biosynthesis II - Gossypium raimondii [Pathway:R-OSI-1119283] Lysine biosynthesis II - Oryza sativa Indica Group [Pathway:R-VVN-1119283] Lysine biosynthesis II - Vitis vinifera [Pathway:R-ONI-1119283] Lysine biosynthesis II - Oryza nivara [Pathway:R-PAB-1119283] Lysine biosynthesis II - Picea abies [Pathway:R-CCR-1119283] Lysine biosynthesis II - Chondrus crispus [Pathway:R-JCU-1119283] Lysine biosynthesis II - Jatropha curcas [Pathway:R-CME-1119283] Lysine biosynthesis II - Cyanidioschyzon merolae [Pathway:R-LPE-1119283] Lysine biosynthesis II - Leersia perrieri [Pathway:R-ATH-1119283] Lysine biosynthesis II - Arabidopsis thaliana [Pathway:R-CCL-1119283] Lysine biosynthesis II - Citrus clementina [Pathway:R-TSP-1119283] Lysine biosynthesis II - Triticum spelta subsp. spelta [Pathway:R-NAT-1119283] Lysine biosynthesis II - Nicotiana attenuata [Pathway:R-SIN-1119283] Lysine biosynthesis II - Sesamum indicum [Pathway:R-LST-1119283] Lysine biosynthesis II - Lathyrus sativus [Pathway:R-BJU-1119283] Lysine biosynthesis II - Brassica juncea [Pathway:R-OBA-1119283] Lysine biosynthesis II - Oryza barthii [Pathway:R-TDI-1119283] Lysine biosynthesis II - Triticum dicoccoides [Pathway:R-TCA-1119283] Lysine biosynthesis II - Theobroma cacao [Pathway:R-CSK-1119283] Lysine biosynthesis II - Cannabis sativa subsp. indica [Pathway:R-PAV-1119283] Lysine biosynthesis II - Prunus avium [Pathway:R-PVU-1119283] Lysine biosynthesis II - Phaseolus vulgaris [Pathway:R-MAC-1119283] Lysine biosynthesis II - Musa acuminata [Pathway:R-NNU-1119283] Lysine biosynthesis II - Nelumbo nucifera [Pathway:R-ADU-1119283] Lysine biosynthesis II - Arachis duranensis [Pathway:R-BRA-1119283] Lysine biosynthesis II - Brassica rapa [Pathway:R-CBA-1119283] Lysine biosynthesis II - Chara braunii [Pathway:R-CCA-1119283] Lysine biosynthesis II - Cajanus cajan [Pathway:R-DEX-1119283] Lysine biosynthesis II - Digitaria exilis [Pathway:R-LSA-1119283] Lysine biosynthesis II - Lactuca sativa [Pathway:R-SVI-1119283] Lysine biosynthesis II - Setaria viridis [Pathway:R-ATR-1119283] Lysine biosynthesis II - Amborella trichopoda [Pathway:R-DCA-1119283] Lysine biosynthesis II - Daucus carota [Pathway:R-OEU-1119283] Lysine biosynthesis II - Olea europaea [Pathway:R-CLA-1119283] Lysine biosynthesis II - Citrullus lanatus [Pathway:R-SLY-1119283] Lysine biosynthesis II - Solanum lycopersicum [Pathway:R-CAN-1119283] Lysine biosynthesis II - Capsicum annuum [Pathway:R-HVU-1119283] Lysine biosynthesis II - Hordeum vulgare [Pathway:R-OPU-1119283] Lysine biosynthesis II - Oryza punctata [Pathway:R-AUM-1119283] Lysine biosynthesis II - Aegilops umbellulata [Pathway:R-MTR-1119283] Lysine biosynthesis II - Medicago truncatula [Pathway:R-TUR-1119283] Lysine biosynthesis II - Triticum urartu [Pathway:R-PHH-1119283] Lysine biosynthesis II - Panicum hallii var. hallii ("HAL2") [Pathway:R-FCR-1119283] Lysine biosynthesis II - Ficus carica [Pathway:R-PTA-1119283] Lysine biosynthesis II - Pinus taeda [Pathway:R-GSU-1119283] Lysine biosynthesis II - Galdieria sulphuraria [Pathway:R-LAN-1119283] Lysine biosynthesis II - Lupinus angustifolius [Pathway:R-ACH-1119283] Lysine biosynthesis II - Actinidia chinensis [Pathway:R-PSO-1119283] Lysine biosynthesis II - Papaver somniferum [Pathway:R-NCO-1119283] Lysine biosynthesis II - Nymphaea colorata [Pathway:R-OAU-1119283] Lysine biosynthesis II - Oryza australiensis [Pathway:R-PPA-1119283] Lysine biosynthesis II - Physcomitrella patens [Pathway:R-BVU-1119283] Lysine biosynthesis II - Beta vulgaris [Pathway:R-CCI-1119283] Lysine biosynthesis II - Corymbia citriodora [Pathway:R-CAR-1119283] Lysine biosynthesis II - Cicer arietinum [Pathway:R-EGR-1119283] Lysine biosynthesis II - Eucalyptus grandis [Pathway:R-CSI-1119283] Lysine biosynthesis II - Citrus sinensis [Pathway:R-HLH-1119283] Lysine biosynthesis II - Humulus lupulus [Pathway:R-OGR-1119283] Lysine biosynthesis II - Oryza meyeriana var. granulata [Pathway:R-JRE-1119283] Lysine biosynthesis II - Juglans regia [Pathway:R-CCP-1119283] Lysine biosynthesis II - Corchorus capsularis [Pathway:R-MES-1119283] Lysine biosynthesis II - Manihot esculenta [Pathway:R-LPR-1119283] Lysine biosynthesis II - Lolium perenne [Pathway:R-VRA-1119283] Lysine biosynthesis II - Vigna radiata [Pathway:R-TTU-1119283] Lysine biosynthesis II - Triticum turgidum [Pathway:R-SPC-1119283] Lysine biosynthesis II - Synechocystis sp. PCC 6803 [Pathway:R-VAN-1119283] Lysine biosynthesis II - Vigna angularis [Pathway:R-PSA-1119283] Lysine biosynthesis II - Pisum sativum [Pathway:R-MDO-1119283] Lysine biosynthesis II - Malus domestica [Pathway:R-ETE-1119283] Lysine biosynthesis II - Eragrostis tef [Pathway:R-CQI-1119283] Lysine biosynthesis II - Chenopodium quinoa [Pathway:R-TAE-1119283] Lysine biosynthesis II - Triticum aestivum [Pathway:R-TTI-1119283] Lysine biosynthesis II - Triticum timopheevii subsp. timopheevii [Pathway:R-SHI-1119283] Lysine biosynthesis II - Salvia hispanica [Pathway:R-OES-1119283] Lysine biosynthesis II - Olea europaea var. sylvestris [Pathway:R-ALY-1119283] Lysine biosynthesis II - Arabidopsis lyrata [Pathway:R-PPE-1119283] Lysine biosynthesis II - Prunus persica [Pathway:R-AOF-1119283] Lysine biosynthesis II - Asparagus officinalis [Pathway:R-RCH-1119283] Lysine biosynthesis II - Rosa chinensis [Pathway:R-FVE-1119283] Lysine biosynthesis II - Fragaria vesca [Pathway:R-SSP-1119283] Lysine biosynthesis II - Saccharum spontaneum [Pathway:R-OLU-1119283] Lysine biosynthesis II - Ostreococcus lucimarinus [Pathway:R-HAN-1119283] Lysine biosynthesis II - Helianthus annuus [Pathway:R-TPR-1119283] Lysine biosynthesis II - Trifolium pratense [Pathway:R-OME-1119283] Lysine biosynthesis II - Oryza meridionalis [Pathway:R-BNA-1119283] Lysine biosynthesis II - Brassica napus [Pathway:R-PDA-1119283] Lysine biosynthesis II - Phoenix dactylifera [Pathway:R-OLO-1119283] Lysine biosynthesis II - Oryza longistaminata [Pathway:R-ZMY-1119283] Lysine biosynthesis II - Zea mays ver5 [Pathway:R-OGL-1119283] Lysine biosynthesis II - Oryza glaberrima [Pathway:R-ECG-1119283] Lysine biosynthesis II - Echinochloa crus-galli [Pathway:R-CSA-1119283] Lysine biosynthesis II - Cucumis sativus [Pathway:R-BOL-1119283] Lysine biosynthesis II - Brassica oleracea [Pathway:R-DRO-1119283] Lysine biosynthesis II - Dioscorea rotundata [Pathway:R-CSC-1119283] Lysine biosynthesis II - Cannabis sativa [Pathway:R-SCR-1119283] Lysine biosynthesis II - Secale cereale [Pathway:R-QSU-1119283] Lysine biosynthesis II - Quercus suber [Pathway:R-CST-1119283] Lysine biosynthesis II - Camelina sativa [Pathway:R-ZJA-1119283] Lysine biosynthesis II - Zoysia japonica [Pathway:R-COL-1119283] Lysine biosynthesis II - Corchorus olitorius [Pathway:R-OKA-1119283] Lysine biosynthesis II - Oryza sativa aus subgroup [Pathway:R-ACO-1119283] Lysine biosynthesis II - Ananas comosus [Pathway:R-PTI-1119283] Lysine biosynthesis II - Populus trichocarpa [Pathway:R-CRE-1119283] Lysine biosynthesis II - Chlamydomonas reinhardtii [Pathway:R-MGU-1119283] Lysine biosynthesis II - Erythranthe guttata [Pathway:R-OOF-1119283] Lysine biosynthesis II - Oryza officinalis [Pathway:R-AHA-1119283] Lysine biosynthesis II - Arabidopsis halleri [Pathway:R-ECU-1119283] Lysine biosynthesis II - Eragrostis curvula [Pathway:R-BDI-1119283] Lysine biosynthesis II - Brachypodium distachyon [Pathway:R-ASA-1119283] Lysine biosynthesis II - Avena sativa [Pathway:R-AHY-1119283] Lysine biosynthesis II - Arachis hypogaea [Pathway:R-PHA-1119283] Lysine biosynthesis II - Panicum hallii ("FIL2") [Pathway:R-PED-1119283] Lysine biosynthesis II - Phyllostachys edulis [Pathway:R-QLO-1119283] Lysine biosynthesis II - Quercus lobata [Pathway:R-SMO-1119283] Lysine biosynthesis II - Selaginella moellendorffii [Pathway:R-FEX-1119283] Lysine biosynthesis II - Fraxinus excelsior (European ash) [Pathway:R-ATA-1119283] Lysine biosynthesis II - Aegilops tauschii [Pathway:R-VFA-1119283] Lysine biosynthesis II - Vicia faba var. faba [Pathway:R-ORU-1119283] Lysine biosynthesis II - Oryza rufipogon
schemaClass	Pathway
species	[Species:186860] Oryza sativa
stId	R-OSA-1119283
summation	[Summation:2880692] lysine biosynthesis II [Summation:2850146] Developed by Gramene.org

Referrals

(hasEvent)

[Pathway:R-OSA-5655122] Amino acid biosynthesis - Oryza sativa

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