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Homocysteine biosynthesis

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created	[InstanceEdit:1164949] Wu, Guanming, 2010-12-11
crossReference	[DatabaseIdentifier:1145047] RiceCyc:PWY-5344
dbId	1119450
displayName	Homocysteine biosynthesis
edited	[InstanceEdit:2878894] Amoss, Kindra, 2012-12-20 [InstanceEdit:2878890] Dharmawardhana, DP, 2012-12-20
eventOf	[Pathway:R-OSA-5655122] Amino acid biosynthesis - Oryza sativa
goBiologicalProcess	[GO_BiologicalProcess:528454] homocysteine biosynthetic process
hasDiagram	true
hasEvent	[Reaction:R-OSA-1121345] Homoserine O-acetyltransferase - Oryza sativa [Reaction:R-OSA-1120775] O-acetyl-L-homoserine+hydrogen sulfide->L-homocysteine+acetate - Oryza sativa
isInDisease	false
isInferred	false
modified	[InstanceEdit:11540225] Elser, Justin, 2025-03-27
name	Homocysteine biosynthesis pathway101856
orthologousEvent	[Pathway:R-HAN-1119450] Homocysteine biosynthesis - Helianthus annuus [Pathway:R-ASA-1119450] Homocysteine biosynthesis - Avena sativa [Pathway:R-CAR-1119450] Homocysteine biosynthesis - Cicer arietinum [Pathway:R-ALY-1119450] Homocysteine biosynthesis - Arabidopsis lyrata [Pathway:R-TDI-1119450] Homocysteine biosynthesis - Triticum dicoccoides [Pathway:R-LPR-1119450] Homocysteine biosynthesis - Lolium perenne [Pathway:R-VUN-1119450] Homocysteine biosynthesis - Vigna unguiculata [Pathway:R-PSA-1119450] Homocysteine biosynthesis - Pisum sativum [Pathway:R-HLP-1119450] Homocysteine biosynthesis - Humulus lupulus var. lupulus [Pathway:R-STU-1119450] Homocysteine biosynthesis - Solanum tuberosum [Pathway:R-SIT-1119450] Homocysteine biosynthesis - Setaria italica [Pathway:R-VVN-1119450] Homocysteine biosynthesis - Vitis vinifera [Pathway:R-PVE-1119450] Homocysteine biosynthesis - Pistacia vera [Pathway:R-CQI-1119450] Homocysteine biosynthesis - Chenopodium quinoa [Pathway:R-BJU-1119450] Homocysteine biosynthesis - Brassica juncea [Pathway:R-HLH-1119450] Homocysteine biosynthesis - Humulus lupulus [Pathway:R-OBA-1119450] Homocysteine biosynthesis - Oryza barthii [Pathway:R-NAT-1119450] Homocysteine biosynthesis - Nicotiana attenuata [Pathway:R-GSO-1119450] Homocysteine biosynthesis - Glycine soja [Pathway:R-PVU-1119450] Homocysteine biosynthesis - Phaseolus vulgaris [Pathway:R-TCA-1119450] Homocysteine biosynthesis - Theobroma cacao [Pathway:R-LPE-1119450] Homocysteine biosynthesis - Leersia perrieri [Pathway:R-CCA-1119450] Homocysteine biosynthesis - Cajanus cajan [Pathway:R-PAB-1119450] Homocysteine biosynthesis - Picea abies [Pathway:R-SHI-1119450] Homocysteine biosynthesis - Salvia hispanica [Pathway:R-CLA-1119450] Homocysteine biosynthesis - Citrullus lanatus [Pathway:R-TTU-1119450] Homocysteine biosynthesis - Triticum turgidum [Pathway:R-SLY-1119450] Homocysteine biosynthesis - Solanum lycopersicum [Pathway:R-SBI-1119450] Homocysteine biosynthesis - Sorghum bicolor [Pathway:R-TAE-1119450] Homocysteine biosynthesis - Triticum aestivum [Pathway:R-ETE-1119450] Homocysteine biosynthesis - Eragrostis tef [Pathway:R-CSA-1119450] Homocysteine biosynthesis - Cucumis sativus [Pathway:R-QLO-1119450] Homocysteine biosynthesis - Quercus lobata [Pathway:R-ORU-1119450] Homocysteine biosynthesis - Oryza rufipogon [Pathway:R-BNA-1119450] Homocysteine biosynthesis - Brassica napus [Pathway:R-OLO-1119450] Homocysteine biosynthesis - Oryza longistaminata [Pathway:R-BOL-1119450] Homocysteine biosynthesis - Brassica oleracea [Pathway:R-CAN-1119450] Homocysteine biosynthesis - Capsicum annuum [Pathway:R-ECG-1119450] Homocysteine biosynthesis - Echinochloa crus-galli [Pathway:R-FVE-1119450] Homocysteine biosynthesis - Fragaria vesca [Pathway:R-DEX-1119450] Homocysteine biosynthesis - Digitaria exilis [Pathway:R-CSC-1119450] Homocysteine biosynthesis - Cannabis sativa [Pathway:R-ONI-1119450] Homocysteine biosynthesis - Oryza nivara [Pathway:R-AOF-1119450] Homocysteine biosynthesis - Asparagus officinalis [Pathway:R-BVU-1119450] Homocysteine biosynthesis - Beta vulgaris [Pathway:R-CCD-1119450] Homocysteine biosynthesis - Cynara cardunculus var. scolymus [Pathway:R-BRA-1119450] Homocysteine biosynthesis - Brassica rapa [Pathway:R-AUM-1119450] Homocysteine biosynthesis - Aegilops umbellulata [Pathway:R-QSU-1119450] Homocysteine biosynthesis - Quercus suber [Pathway:R-OPU-1119450] Homocysteine biosynthesis - Oryza punctata [Pathway:R-HVU-1119450] Homocysteine biosynthesis - Hordeum vulgare [Pathway:R-PTI-1119450] Homocysteine biosynthesis - Populus trichocarpa [Pathway:R-LAN-1119450] Homocysteine biosynthesis - Lupinus angustifolius [Pathway:R-PSO-1119450] Homocysteine biosynthesis - Papaver somniferum [Pathway:R-FCR-1119450] Homocysteine biosynthesis - Ficus carica [Pathway:R-ITR-1119450] Homocysteine biosynthesis - Ipomoea triloba [Pathway:R-PTA-1119450] Homocysteine biosynthesis - Pinus taeda [Pathway:R-VAN-1119450] Homocysteine biosynthesis - Vigna angularis [Pathway:R-MES-1119450] Homocysteine biosynthesis - Manihot esculenta [Pathway:R-CCP-1119450] Homocysteine biosynthesis - Corchorus capsularis [Pathway:R-CRU-1119450] Homocysteine biosynthesis - Capsella rubella [Pathway:R-BDI-1119450] Homocysteine biosynthesis - Brachypodium distachyon [Pathway:R-CCN-1119450] Homocysteine biosynthesis - Coffea canephora [Pathway:R-TPR-1119450] Homocysteine biosynthesis - Trifolium pratense [Pathway:R-CML-1119450] Homocysteine biosynthesis - Cucumis melo [Pathway:R-GMA-1119450] Homocysteine biosynthesis - Glycine max [Pathway:R-JRE-1119450] Homocysteine biosynthesis - Juglans regia [Pathway:R-ZMY-1119450] Homocysteine biosynthesis - Zea mays ver5 [Pathway:R-TTI-1119450] Homocysteine biosynthesis - Triticum timopheevii subsp. timopheevii [Pathway:R-VFA-1119450] Homocysteine biosynthesis - Vicia faba var. faba [Pathway:R-CSI-1119450] Homocysteine biosynthesis - Citrus sinensis [Pathway:R-AIP-1119450] Homocysteine biosynthesis - Arachis ipaensis [Pathway:R-OES-1119450] Homocysteine biosynthesis - Olea europaea var. sylvestris [Pathway:R-OBR-1119450] Homocysteine biosynthesis - Oryza brachyantha [Pathway:R-JCU-1119450] Homocysteine biosynthesis - Jatropha curcas [Pathway:R-SSP-1119450] Homocysteine biosynthesis - Saccharum spontaneum [Pathway:R-VRA-1119450] Homocysteine biosynthesis - Vigna radiata [Pathway:R-ZJA-1119450] Homocysteine biosynthesis - Zoysia japonica [Pathway:R-OME-1119450] Homocysteine biosynthesis - Oryza meridionalis [Pathway:R-OSI-1119450] Homocysteine biosynthesis - Oryza sativa Indica Group [Pathway:R-MAC-1119450] Homocysteine biosynthesis - Musa acuminata [Pathway:R-ADU-1119450] Homocysteine biosynthesis - Arachis duranensis [Pathway:R-CCL-1119450] Homocysteine biosynthesis - Citrus clementina [Pathway:R-NNU-1119450] Homocysteine biosynthesis - Nelumbo nucifera [Pathway:R-PHH-1119450] Homocysteine biosynthesis - Panicum hallii var. hallii ("HAL2") [Pathway:R-PPE-1119450] Homocysteine biosynthesis - Prunus persica [Pathway:R-RCH-1119450] Homocysteine biosynthesis - Rosa chinensis [Pathway:R-LST-1119450] Homocysteine biosynthesis - Lathyrus sativus [Pathway:R-OGU-1119450] Homocysteine biosynthesis - Oryza glumaepatula [Pathway:R-ATH-1119450] Homocysteine biosynthesis - Arabidopsis thaliana [Pathway:R-GRA-1119450] Homocysteine biosynthesis - Gossypium raimondii [Pathway:R-LSA-1119450] Homocysteine biosynthesis - Lactuca sativa [Pathway:R-SVI-1119450] Homocysteine biosynthesis - Setaria viridis [Pathway:R-DCA-1119450] Homocysteine biosynthesis - Daucus carota [Pathway:R-CST-1119450] Homocysteine biosynthesis - Camelina sativa [Pathway:R-COL-1119450] Homocysteine biosynthesis - Corchorus olitorius [Pathway:R-AHY-1119450] Homocysteine biosynthesis - Arachis hypogaea [Pathway:R-OEU-1119450] Homocysteine biosynthesis - Olea europaea [Pathway:R-SCR-1119450] Homocysteine biosynthesis - Secale cereale [Pathway:R-ATR-1119450] Homocysteine biosynthesis - Amborella trichopoda [Pathway:R-ACH-1119450] Homocysteine biosynthesis - Actinidia chinensis [Pathway:R-TSP-1119450] Homocysteine biosynthesis - Triticum spelta subsp. spelta [Pathway:R-MDO-1119450] Homocysteine biosynthesis - Malus domestica [Pathway:R-MTR-1119450] Homocysteine biosynthesis - Medicago truncatula [Pathway:R-PAV-1119450] Homocysteine biosynthesis - Prunus avium [Pathway:R-ZMA-1119450] Homocysteine biosynthesis - Zea mays [Pathway:R-PHA-1119450] Homocysteine biosynthesis - Panicum hallii ("FIL2") [Pathway:R-CSK-1119450] Homocysteine biosynthesis - Cannabis sativa subsp. indica [Pathway:R-PED-1119450] Homocysteine biosynthesis - Phyllostachys edulis [Pathway:R-CCI-1119450] Homocysteine biosynthesis - Corymbia citriodora [Pathway:R-FEX-1119450] Homocysteine biosynthesis - Fraxinus excelsior (European ash) [Pathway:R-TUR-1119450] Homocysteine biosynthesis - Triticum urartu [Pathway:R-ATA-1119450] Homocysteine biosynthesis - Aegilops tauschii [Pathway:R-ECU-1119450] Homocysteine biosynthesis - Eragrostis curvula [Pathway:R-EGR-1119450] Homocysteine biosynthesis - Eucalyptus grandis [Pathway:R-AHA-1119450] Homocysteine biosynthesis - Arabidopsis halleri [Pathway:R-NCO-1119450] Homocysteine biosynthesis - Nymphaea colorata [Pathway:R-DRO-1119450] Homocysteine biosynthesis - Dioscorea rotundata
revised	[InstanceEdit:2878890] Dharmawardhana, DP, 2012-12-20
schemaClass	Pathway
species	[Species:186860] Oryza sativa
stId	R-OSA-1119450
summation	[Summation:2878892] homocysteine biosynthesis [Summation:2850146] Developed by Gramene.org

Referrals

(hasEvent)

[Pathway:R-OSA-5655122] Amino acid biosynthesis - Oryza sativa

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