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TCA cycle (plant)

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compartment	[Compartment:70616] mitochondrial inner membrane [Compartment:5460] mitochondrial matrix
created	[InstanceEdit:1164949] Wu, Guanming, 2010-12-11
crossReference	[DatabaseIdentifier:1146327] RiceCyc:TCA
dbId	1119533
displayName	TCA cycle (plant)
eventOf	[Pathway:R-OSA-2961031] Generation of precursor metabolites and energy - Oryza sativa
goBiologicalProcess	[GO_BiologicalProcess:12759] tricarboxylic acid cycle
hasDiagram	true
hasEvent	[Reaction:R-OSA-1120092] oxaloacetate + acetyl-CoA + H2O => citrate + CoA-SH - Oryza sativa [Reaction:R-OSA-1119632] citrate <=> isocitrate - Oryza sativa [Reaction:R-OSA-1120194] isocitrate + NAD+ => 2-oxoglutarate + CO2 + NADH + H+ - Oryza sativa [Reaction:R-OSA-1120492] 2-oxoglutarate + coA-SH + NAD+ => succinyl-CoA + CO2 + NADH + H+ - Oryza sativa [Reaction:R-OSA-1121627] succinyl-CoA + ADP + orthophosphate => succinate + ATP + CoA-SH - Oryza sativa [Reaction:R-OSA-1120286] succinate + ubiquinone => fumarate + ubiquinol - Oryza sativa [Reaction:R-OSA-1121548] fumarate + H2O <=> malate - Oryza sativa [Reaction:R-OSA-1120787] malate + NAD+ <=> oxaloacetate + NADH + H+ - Oryza sativa [Reaction:R-OSA-5146775] MAL [mitochondrial matrix]->PYR [mitochondrial matrix] - Oryza sativa [Reaction:R-OSA-5146774] PYR [mitochondrial matrix]->Ac-CoA [mitochondrial matrix] - Oryza sativa
isInDisease	false
isInferred	false
literatureReference	[LiteratureReference:5146800] Pyruvate and malate transport and oxidation in corn mitochondria [LiteratureReference:5146801] Metabolic control and regulation of the tricarboxylic acid cycle in photosynthetic and heterotrophic plant tissues [LiteratureReference:5146802] Purification of NAD malic enzyme from potato and investigation of some physical and kinetic properties [LiteratureReference:5146795] Organization and regulation of mitochondrial respiration in plants [LiteratureReference:1173241] Not just a circle: flux modes in the plant TCA cycle [LiteratureReference:1419470] NAD-malic enzymes of Arabidopsis thaliana display distinct kinetic mechanisms that support differences in physiological control [LiteratureReference:1419471] Three different and tissue-specific NAD-malic enzymes generated by alternative subunit association in Arabidopsis thaliana
modified	[InstanceEdit:11540225] Elser, Justin, 2025-03-27
name	TCA cycle (plant)
orthologousEvent	[Pathway:R-MAC-1119533] TCA cycle (plant) - Musa acuminata [Pathway:R-OMI-1119533] TCA cycle (plant) - Oryza minuta [Pathway:R-CRU-1119533] TCA cycle (plant) - Capsella rubella [Pathway:R-CSK-1119533] TCA cycle (plant) - Cannabis sativa subsp. indica [Pathway:R-BNA-1119533] TCA cycle (plant) - Brassica napus [Pathway:R-OGR-1119533] TCA cycle (plant) - Oryza meyeriana var. granulata [Pathway:R-PVU-1119533] TCA cycle (plant) - Phaseolus vulgaris [Pathway:R-VRA-1119533] TCA cycle (plant) - Vigna radiata [Pathway:R-LAN-1119533] TCA cycle (plant) - Lupinus angustifolius [Pathway:R-OBR-1119533] TCA cycle (plant) - Oryza brachyantha [Pathway:R-JRE-1119533] TCA cycle (plant) - Juglans regia [Pathway:R-PVE-1119533] TCA cycle (plant) - Pistacia vera [Pathway:R-VAN-1119533] TCA cycle (plant) - Vigna angularis [Pathway:R-GMA-1119533] TCA cycle (plant) - Glycine max [Pathway:R-MPO-1119533] TCA cycle (plant) - Marchantia polymorpha [Pathway:R-CCD-1119533] TCA cycle (plant) - Cynara cardunculus var. scolymus [Pathway:R-ZMA-1119533] TCA cycle (plant) - Zea mays [Pathway:R-OSI-1119533] TCA cycle (plant) - Oryza sativa Indica Group [Pathway:R-NNU-1119533] TCA cycle (plant) - Nelumbo nucifera [Pathway:R-TSP-1119533] TCA cycle (plant) - Triticum spelta subsp. spelta [Pathway:R-TTI-1119533] TCA cycle (plant) - Triticum timopheevii subsp. timopheevii [Pathway:R-TDI-1119533] TCA cycle (plant) - Triticum dicoccoides [Pathway:R-VVN-1119533] TCA cycle (plant) - Vitis vinifera [Pathway:R-SHI-1119533] TCA cycle (plant) - Salvia hispanica [Pathway:R-ALY-1119533] TCA cycle (plant) - Arabidopsis lyrata [Pathway:R-CCP-1119533] TCA cycle (plant) - Corchorus capsularis [Pathway:R-PAB-1119533] TCA cycle (plant) - Picea abies [Pathway:R-ATH-1119533] TCA cycle (plant) - Arabidopsis thaliana [Pathway:R-FVE-1119533] TCA cycle (plant) - Fragaria vesca [Pathway:R-TAE-1119533] TCA cycle (plant) - Triticum aestivum [Pathway:R-PPE-1119533] TCA cycle (plant) - Prunus persica [Pathway:R-CCL-1119533] TCA cycle (plant) - Citrus clementina [Pathway:R-OKA-1119533] TCA cycle (plant) - Oryza sativa aus subgroup [Pathway:R-ZMY-1119533] TCA cycle (plant) - Zea mays ver5 [Pathway:R-JCU-1119533] TCA cycle (plant) - Jatropha curcas [Pathway:R-MDO-1119533] TCA cycle (plant) - Malus domestica [Pathway:R-CLA-1119533] TCA cycle (plant) - Citrullus lanatus [Pathway:R-LST-1119533] TCA cycle (plant) - Lathyrus sativus [Pathway:R-CCA-1119533] TCA cycle (plant) - Cajanus cajan [Pathway:R-TCA-1119533] TCA cycle (plant) - Theobroma cacao [Pathway:R-DEX-1119533] TCA cycle (plant) - Digitaria exilis [Pathway:R-PSO-1119533] TCA cycle (plant) - Papaver somniferum [Pathway:R-MTR-1119533] TCA cycle (plant) - Medicago truncatula [Pathway:R-OGL-1119533] TCA cycle (plant) - Oryza glaberrima [Pathway:R-ORU-1119533] TCA cycle (plant) - Oryza rufipogon [Pathway:R-SMO-1119533] TCA cycle (plant) - Selaginella moellendorffii [Pathway:R-SSP-1119533] TCA cycle (plant) - Saccharum spontaneum [Pathway:R-AUM-1119533] TCA cycle (plant) - Aegilops umbellulata [Pathway:R-SCR-1119533] TCA cycle (plant) - Secale cereale [Pathway:R-CST-1119533] TCA cycle (plant) - Camelina sativa [Pathway:R-SVI-1119533] TCA cycle (plant) - Setaria viridis [Pathway:R-ACO-1119533] TCA cycle (plant) - Ananas comosus [Pathway:R-COL-1119533] TCA cycle (plant) - Corchorus olitorius [Pathway:R-OES-1119533] TCA cycle (plant) - Olea europaea var. sylvestris [Pathway:R-ZJA-1119533] TCA cycle (plant) - Zoysia japonica [Pathway:R-CME-1119533] TCA cycle (plant) - Cyanidioschyzon merolae [Pathway:R-BDI-1119533] TCA cycle (plant) - Brachypodium distachyon [Pathway:R-AHA-1119533] TCA cycle (plant) - Arabidopsis halleri [Pathway:R-PSA-1119533] TCA cycle (plant) - Pisum sativum [Pathway:R-PTI-1119533] TCA cycle (plant) - Populus trichocarpa [Pathway:R-SPC-1119533] TCA cycle (plant) - Synechocystis sp. PCC 6803 [Pathway:R-ASA-1119533] TCA cycle (plant) - Avena sativa [Pathway:R-ECU-1119533] TCA cycle (plant) - Eragrostis curvula [Pathway:R-VUN-1119533] TCA cycle (plant) - Vigna unguiculata [Pathway:R-CCI-1119533] TCA cycle (plant) - Corymbia citriodora [Pathway:R-CML-1119533] TCA cycle (plant) - Cucumis melo [Pathway:R-QLO-1119533] TCA cycle (plant) - Quercus lobata [Pathway:R-CAR-1119533] TCA cycle (plant) - Cicer arietinum [Pathway:R-AHY-1119533] TCA cycle (plant) - Arachis hypogaea [Pathway:R-BOL-1119533] TCA cycle (plant) - Brassica oleracea [Pathway:R-EGR-1119533] TCA cycle (plant) - Eucalyptus grandis [Pathway:R-PED-1119533] TCA cycle (plant) - Phyllostachys edulis [Pathway:R-VFA-1119533] TCA cycle (plant) - Vicia faba var. faba [Pathway:R-NCO-1119533] TCA cycle (plant) - Nymphaea colorata [Pathway:R-DCA-1119533] TCA cycle (plant) - Daucus carota [Pathway:R-BRA-1119533] TCA cycle (plant) - Brassica rapa [Pathway:R-CBA-1119533] TCA cycle (plant) - Chara braunii [Pathway:R-CSI-1119533] TCA cycle (plant) - Citrus sinensis [Pathway:R-AIP-1119533] TCA cycle (plant) - Arachis ipaensis [Pathway:R-OEU-1119533] TCA cycle (plant) - Olea europaea [Pathway:R-SBI-1119533] TCA cycle (plant) - Sorghum bicolor [Pathway:R-PPA-1119533] TCA cycle (plant) - Physcomitrella patens [Pathway:R-SIT-1119533] TCA cycle (plant) - Setaria italica [Pathway:R-MES-1119533] TCA cycle (plant) - Manihot esculenta [Pathway:R-GSO-1119533] TCA cycle (plant) - Glycine soja [Pathway:R-HLP-1119533] TCA cycle (plant) - Humulus lupulus var. lupulus [Pathway:R-TTU-1119533] TCA cycle (plant) - Triticum turgidum [Pathway:R-ACH-1119533] TCA cycle (plant) - Actinidia chinensis [Pathway:R-GSU-1119533] TCA cycle (plant) - Galdieria sulphuraria [Pathway:R-CAN-1119533] TCA cycle (plant) - Capsicum annuum [Pathway:R-ETE-1119533] TCA cycle (plant) - Eragrostis tef [Pathway:R-FCR-1119533] TCA cycle (plant) - Ficus carica [Pathway:R-CRE-1119533] TCA cycle (plant) - Chlamydomonas reinhardtii [Pathway:R-OGU-1119533] TCA cycle (plant) - Oryza glumaepatula [Pathway:R-PTA-1119533] TCA cycle (plant) - Pinus taeda [Pathway:R-LPR-1119533] TCA cycle (plant) - Lolium perenne [Pathway:R-FEX-1119533] TCA cycle (plant) - Fraxinus excelsior (European ash) [Pathway:R-RCH-1119533] TCA cycle (plant) - Rosa chinensis [Pathway:R-ONI-1119533] TCA cycle (plant) - Oryza nivara [Pathway:R-LPE-1119533] TCA cycle (plant) - Leersia perrieri [Pathway:R-ADU-1119533] TCA cycle (plant) - Arachis duranensis [Pathway:R-CQI-1119533] TCA cycle (plant) - Chenopodium quinoa [Pathway:R-OBA-1119533] TCA cycle (plant) - Oryza barthii [Pathway:R-AOF-1119533] TCA cycle (plant) - Asparagus officinalis [Pathway:R-GRA-1119533] TCA cycle (plant) - Gossypium raimondii [Pathway:R-PAV-1119533] TCA cycle (plant) - Prunus avium [Pathway:R-PDA-1119533] TCA cycle (plant) - Phoenix dactylifera [Pathway:R-OLO-1119533] TCA cycle (plant) - Oryza longistaminata [Pathway:R-OME-1119533] TCA cycle (plant) - Oryza meridionalis [Pathway:R-TPR-1119533] TCA cycle (plant) - Trifolium pratense [Pathway:R-BJU-1119533] TCA cycle (plant) - Brassica juncea [Pathway:R-ITR-1119533] TCA cycle (plant) - Ipomoea triloba [Pathway:R-ATR-1119533] TCA cycle (plant) - Amborella trichopoda [Pathway:R-QSU-1119533] TCA cycle (plant) - Quercus suber [Pathway:R-HAN-1119533] TCA cycle (plant) - Helianthus annuus [Pathway:R-HVU-1119533] TCA cycle (plant) - Hordeum vulgare [Pathway:R-CCN-1119533] TCA cycle (plant) - Coffea canephora [Pathway:R-ECG-1119533] TCA cycle (plant) - Echinochloa crus-galli [Pathway:R-CSA-1119533] TCA cycle (plant) - Cucumis sativus [Pathway:R-CCR-1119533] TCA cycle (plant) - Chondrus crispus [Pathway:R-LSA-1119533] TCA cycle (plant) - Lactuca sativa [Pathway:R-OPU-1119533] TCA cycle (plant) - Oryza punctata [Pathway:R-TUR-1119533] TCA cycle (plant) - Triticum urartu [Pathway:R-PHH-1119533] TCA cycle (plant) - Panicum hallii var. hallii ("HAL2") [Pathway:R-STU-1119533] TCA cycle (plant) - Solanum tuberosum [Pathway:R-NAT-1119533] TCA cycle (plant) - Nicotiana attenuata [Pathway:R-DRO-1119533] TCA cycle (plant) - Dioscorea rotundata [Pathway:R-OOF-1119533] TCA cycle (plant) - Oryza officinalis [Pathway:R-OAU-1119533] TCA cycle (plant) - Oryza australiensis [Pathway:R-HLH-1119533] TCA cycle (plant) - Humulus lupulus [Pathway:R-BVU-1119533] TCA cycle (plant) - Beta vulgaris [Pathway:R-MGU-1119533] TCA cycle (plant) - Erythranthe guttata [Pathway:R-CSC-1119533] TCA cycle (plant) - Cannabis sativa [Pathway:R-SLY-1119533] TCA cycle (plant) - Solanum lycopersicum [Pathway:R-PHA-1119533] TCA cycle (plant) - Panicum hallii ("FIL2") [Pathway:R-SIN-1119533] TCA cycle (plant) - Sesamum indicum [Pathway:R-ATA-1119533] TCA cycle (plant) - Aegilops tauschii [Pathway:R-OLU-1119533] TCA cycle (plant) - Ostreococcus lucimarinus
schemaClass	Pathway
species	[Species:186860] Oryza sativa
stId	R-OSA-1119533
summation	[Summation:1173250] The TCA cycle mediates the catabolism of acetyl-CoA to yield... [Summation:2850146] Developed by Gramene.org

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(hasEvent)

[Pathway:R-OSA-2961031] Generation of precursor metabolites and energy - Oryza sativa

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