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diaminopimelate decarboxylase plastidic

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catalystActivity	[CatalystActivity:5606497] diaminopimelate decarboxylase activity of pyridoxal-dependent decarboxylase protein (LOC_OS02G24354.1) [plastid stroma]
compartment	[Compartment:1141] plastid stroma
created	[InstanceEdit:5606474] Amarasinghe, Vindhya, 2014-07-07
crossReference	[DatabaseIdentifier:27864] EC:4.1.1.20 [DatabaseIdentifier:1144812] RiceCyc:DIAMINOPIMDECARB-RXN
dbId	5606481
displayName	diaminopimelate decarboxylase plastidic
eventOf	[Pathway:R-OSA-1119419] Lysine biosynthesis VI - Oryza sativa
input	[SimpleEntity:R-ALL-1168751] H+ [plastid stroma] [SimpleEntity:R-ALL-5606487] meso-diaminopimelate [plastid stroma]
isInDisease	false
isInferred	false
modified	[InstanceEdit:11540225] Elser, Justin, 2025-03-27
name	diaminopimelate decarboxylase plastidic DAP decarboxylase biochemicalReaction14760
orthologousEvent	[Reaction:R-CME-5606481] diaminopimelate decarboxylase plastidic - Cyanidioschyzon merolae [Reaction:R-TSP-5606481] diaminopimelate decarboxylase plastidic - Triticum spelta subsp. spelta [Reaction:R-CQI-5606481] diaminopimelate decarboxylase plastidic - Chenopodium quinoa [Reaction:R-LPR-5606481] diaminopimelate decarboxylase plastidic - Lolium perenne [Reaction:R-NAT-5606481] diaminopimelate decarboxylase plastidic - Nicotiana attenuata [Reaction:R-SCR-5606481] diaminopimelate decarboxylase plastidic - Secale cereale [Reaction:R-SVI-5606481] diaminopimelate decarboxylase plastidic - Setaria viridis [Reaction:R-VVN-5606481] diaminopimelate decarboxylase plastidic - Vitis vinifera [Reaction:R-MTR-5606481] diaminopimelate decarboxylase plastidic - Medicago truncatula [Reaction:R-MPO-5606481] diaminopimelate decarboxylase plastidic - Marchantia polymorpha [Reaction:R-BJU-5606481] diaminopimelate decarboxylase plastidic - Brassica juncea [Reaction:R-CAN-5606481] diaminopimelate decarboxylase plastidic - Capsicum annuum [Reaction:R-AHY-5606481] diaminopimelate decarboxylase plastidic - Arachis hypogaea [Reaction:R-TTI-5606481] diaminopimelate decarboxylase plastidic - Triticum timopheevii subsp. timopheevii [Reaction:R-ACH-5606481] diaminopimelate decarboxylase plastidic - Actinidia chinensis [Reaction:R-JRE-5606481] diaminopimelate decarboxylase plastidic - Juglans regia [Reaction:R-SPC-5606481] diaminopimelate decarboxylase plastidic - Synechocystis sp. PCC 6803 [Reaction:R-CST-5606481] diaminopimelate decarboxylase plastidic - Camelina sativa [Reaction:R-OOF-5606481] diaminopimelate decarboxylase plastidic - Oryza officinalis [Reaction:R-PAB-5606481] diaminopimelate decarboxylase plastidic - Picea abies [Reaction:R-ETE-5606481] diaminopimelate decarboxylase plastidic - Eragrostis tef [Reaction:R-CCN-5606481] diaminopimelate decarboxylase plastidic - Coffea canephora [Reaction:R-JCU-5606481] diaminopimelate decarboxylase plastidic - Jatropha curcas [Reaction:R-ACO-5606481] diaminopimelate decarboxylase plastidic - Ananas comosus [Reaction:R-OEU-5606481] diaminopimelate decarboxylase plastidic - Olea europaea [Reaction:R-PVE-5606481] diaminopimelate decarboxylase plastidic - Pistacia vera [Reaction:R-CSK-5606481] diaminopimelate decarboxylase plastidic - Cannabis sativa subsp. indica [Reaction:R-ZMA-5606481] diaminopimelate decarboxylase plastidic - Zea mays [Reaction:R-PTA-5606481] diaminopimelate decarboxylase plastidic - Pinus taeda [Reaction:R-PED-5606481] diaminopimelate decarboxylase plastidic - Phyllostachys edulis [Reaction:R-CSI-5606481] diaminopimelate decarboxylase plastidic - Citrus sinensis [Reaction:R-HLP-5606481] diaminopimelate decarboxylase plastidic - Humulus lupulus var. lupulus [Reaction:R-CSC-5606481] diaminopimelate decarboxylase plastidic - Cannabis sativa [Reaction:R-STU-5606481] diaminopimelate decarboxylase plastidic - Solanum tuberosum [Reaction:R-MAC-5606481] diaminopimelate decarboxylase plastidic - Musa acuminata [Reaction:R-EGR-5606481] diaminopimelate decarboxylase plastidic - Eucalyptus grandis [Reaction:R-ATH-5606481] diaminopimelate decarboxylase plastidic - Arabidopsis thaliana [Reaction:R-COL-5606481] diaminopimelate decarboxylase plastidic - Corchorus olitorius [Reaction:R-PDA-5606481] diaminopimelate decarboxylase plastidic - Phoenix dactylifera [Reaction:R-GMA-5606481] diaminopimelate decarboxylase plastidic - Glycine max [Reaction:R-FEX-5606481] diaminopimelate decarboxylase plastidic - Fraxinus excelsior (European ash) [Reaction:R-TUR-5606481] diaminopimelate decarboxylase plastidic - Triticum urartu [Reaction:R-VFA-5606481] diaminopimelate decarboxylase plastidic - Vicia faba var. faba [Reaction:R-SSP-5606481] diaminopimelate decarboxylase plastidic - Saccharum spontaneum [Reaction:R-SIT-5606481] diaminopimelate decarboxylase plastidic - Setaria italica [Reaction:R-ORU-5606481] diaminopimelate decarboxylase plastidic - Oryza rufipogon [Reaction:R-OBR-5606481] diaminopimelate decarboxylase plastidic - Oryza brachyantha [Reaction:R-PPE-5606481] diaminopimelate decarboxylase plastidic - Prunus persica [Reaction:R-CRU-5606481] diaminopimelate decarboxylase plastidic - Capsella rubella [Reaction:R-LST-5606481] diaminopimelate decarboxylase plastidic - Lathyrus sativus [Reaction:R-CLA-5606481] diaminopimelate decarboxylase plastidic - Citrullus lanatus [Reaction:R-ECU-5606481] diaminopimelate decarboxylase plastidic - Eragrostis curvula [Reaction:R-SIN-5606481] diaminopimelate decarboxylase plastidic - Sesamum indicum [Reaction:R-ALY-5606481] diaminopimelate decarboxylase plastidic - Arabidopsis lyrata [Reaction:R-CCL-5606481] diaminopimelate decarboxylase plastidic - Citrus clementina [Reaction:R-CCI-5606481] diaminopimelate decarboxylase plastidic - Corymbia citriodora [Reaction:R-CAR-5606481] diaminopimelate decarboxylase plastidic - Cicer arietinum [Reaction:R-VUN-5606481] diaminopimelate decarboxylase plastidic - Vigna unguiculata [Reaction:R-ECG-5606481] diaminopimelate decarboxylase plastidic - Echinochloa crus-galli [Reaction:R-LSA-5606481] diaminopimelate decarboxylase plastidic - Lactuca sativa [Reaction:R-LAN-5606481] diaminopimelate decarboxylase plastidic - Lupinus angustifolius [Reaction:R-HVU-5606481] diaminopimelate decarboxylase plastidic - Hordeum vulgare [Reaction:R-BVU-5606481] diaminopimelate decarboxylase plastidic - Beta vulgaris [Reaction:R-OGU-5606481] diaminopimelate decarboxylase plastidic - Oryza glumaepatula [Reaction:R-LPE-5606481] diaminopimelate decarboxylase plastidic - Leersia perrieri [Reaction:R-TTU-5606481] diaminopimelate decarboxylase plastidic - Triticum turgidum [Reaction:R-CBA-5606481] diaminopimelate decarboxylase plastidic - Chara braunii [Reaction:R-OLO-5606481] diaminopimelate decarboxylase plastidic - Oryza longistaminata [Reaction:R-CRE-5606481] diaminopimelate decarboxylase plastidic - Chlamydomonas reinhardtii [Reaction:R-GRA-5606481] diaminopimelate decarboxylase plastidic - Gossypium raimondii [Reaction:R-CCA-5606481] diaminopimelate decarboxylase plastidic - Cajanus cajan [Reaction:R-AIP-5606481] diaminopimelate decarboxylase plastidic - Arachis ipaensis [Reaction:R-BDI-5606481] diaminopimelate decarboxylase plastidic - Brachypodium distachyon [Reaction:R-DEX-5606481] diaminopimelate decarboxylase plastidic - Digitaria exilis [Reaction:R-NNU-5606481] diaminopimelate decarboxylase plastidic - Nelumbo nucifera [Reaction:R-TDI-5606481] diaminopimelate decarboxylase plastidic - Triticum dicoccoides [Reaction:R-ASA-5606481] diaminopimelate decarboxylase plastidic - Avena sativa [Reaction:R-ATR-5606481] diaminopimelate decarboxylase plastidic - Amborella trichopoda [Reaction:R-PHA-5606481] diaminopimelate decarboxylase plastidic - Panicum hallii ("FIL2") [Reaction:R-OAU-5606481] diaminopimelate decarboxylase plastidic - Oryza australiensis [Reaction:R-AUM-5606481] diaminopimelate decarboxylase plastidic - Aegilops umbellulata [Reaction:R-OPU-5606481] diaminopimelate decarboxylase plastidic - Oryza punctata [Reaction:R-OGR-5606481] diaminopimelate decarboxylase plastidic - Oryza meyeriana var. granulata [Reaction:R-OKA-5606481] diaminopimelate decarboxylase plastidic - Oryza sativa aus subgroup [Reaction:R-PTI-5606481] diaminopimelate decarboxylase plastidic - Populus trichocarpa [Reaction:R-PAV-5606481] diaminopimelate decarboxylase plastidic - Prunus avium [Reaction:R-OMI-5606481] diaminopimelate decarboxylase plastidic - Oryza minuta [Reaction:R-GSO-5606481] diaminopimelate decarboxylase plastidic - Glycine soja [Reaction:R-SMO-5606481] diaminopimelate decarboxylase plastidic - Selaginella moellendorffii [Reaction:R-MES-5606481] diaminopimelate decarboxylase plastidic - Manihot esculenta [Reaction:R-TCA-5606481] diaminopimelate decarboxylase plastidic - Theobroma cacao [Reaction:R-TPR-5606481] diaminopimelate decarboxylase plastidic - Trifolium pratense [Reaction:R-BOL-5606481] diaminopimelate decarboxylase plastidic - Brassica oleracea [Reaction:R-ZJA-5606481] diaminopimelate decarboxylase plastidic - Zoysia japonica [Reaction:R-FVE-5606481] diaminopimelate decarboxylase plastidic - Fragaria vesca [Reaction:R-CML-5606481] diaminopimelate decarboxylase plastidic - Cucumis melo [Reaction:R-GSU-5606481] diaminopimelate decarboxylase plastidic - Galdieria sulphuraria [Reaction:R-PSO-5606481] diaminopimelate decarboxylase plastidic - Papaver somniferum [Reaction:R-VRA-5606481] diaminopimelate decarboxylase plastidic - Vigna radiata [Reaction:R-PPA-5606481] diaminopimelate decarboxylase plastidic - Physcomitrella patens [Reaction:R-OGL-5606481] diaminopimelate decarboxylase plastidic - Oryza glaberrima [Reaction:R-ITR-5606481] diaminopimelate decarboxylase plastidic - Ipomoea triloba [Reaction:R-MDO-5606481] diaminopimelate decarboxylase plastidic - Malus domestica [Reaction:R-OBA-5606481] diaminopimelate decarboxylase plastidic - Oryza barthii [Reaction:R-CCR-5606481] diaminopimelate decarboxylase plastidic - Chondrus crispus [Reaction:R-VAN-5606481] diaminopimelate decarboxylase plastidic - Vigna angularis [Reaction:R-PHH-5606481] diaminopimelate decarboxylase plastidic - Panicum hallii var. hallii ("HAL2") [Reaction:R-AOF-5606481] diaminopimelate decarboxylase plastidic - Asparagus officinalis [Reaction:R-CCD-5606481] diaminopimelate decarboxylase plastidic - Cynara cardunculus var. scolymus [Reaction:R-SHI-5606481] diaminopimelate decarboxylase plastidic - Salvia hispanica [Reaction:R-HAN-5606481] diaminopimelate decarboxylase plastidic - Helianthus annuus [Reaction:R-ZMY-5606481] diaminopimelate decarboxylase plastidic - Zea mays ver5 [Reaction:R-DCA-5606481] diaminopimelate decarboxylase plastidic - Daucus carota [Reaction:R-ATA-5606481] diaminopimelate decarboxylase plastidic - Aegilops tauschii [Reaction:R-TAE-5606481] diaminopimelate decarboxylase plastidic - Triticum aestivum [Reaction:R-QLO-5606481] diaminopimelate decarboxylase plastidic - Quercus lobata [Reaction:R-ADU-5606481] diaminopimelate decarboxylase plastidic - Arachis duranensis [Reaction:R-OSI-5606481] diaminopimelate decarboxylase plastidic - Oryza sativa Indica Group [Reaction:R-PSA-5606481] diaminopimelate decarboxylase plastidic - Pisum sativum [Reaction:R-CSA-5606481] diaminopimelate decarboxylase plastidic - Cucumis sativus [Reaction:R-OES-5606481] diaminopimelate decarboxylase plastidic - Olea europaea var. sylvestris [Reaction:R-PVU-5606481] diaminopimelate decarboxylase plastidic - Phaseolus vulgaris [Reaction:R-RCH-5606481] diaminopimelate decarboxylase plastidic - Rosa chinensis [Reaction:R-QSU-5606481] diaminopimelate decarboxylase plastidic - Quercus suber [Reaction:R-SBI-5606481] diaminopimelate decarboxylase plastidic - Sorghum bicolor [Reaction:R-BNA-5606481] diaminopimelate decarboxylase plastidic - Brassica napus [Reaction:R-ONI-5606481] diaminopimelate decarboxylase plastidic - Oryza nivara [Reaction:R-FCR-5606481] diaminopimelate decarboxylase plastidic - Ficus carica [Reaction:R-BRA-5606481] diaminopimelate decarboxylase plastidic - Brassica rapa [Reaction:R-AHA-5606481] diaminopimelate decarboxylase plastidic - Arabidopsis halleri [Reaction:R-DRO-5606481] diaminopimelate decarboxylase plastidic - Dioscorea rotundata [Reaction:R-CCP-5606481] diaminopimelate decarboxylase plastidic - Corchorus capsularis [Reaction:R-MGU-5606481] diaminopimelate decarboxylase plastidic - Erythranthe guttata [Reaction:R-NCO-5606481] diaminopimelate decarboxylase plastidic - Nymphaea colorata [Reaction:R-OME-5606481] diaminopimelate decarboxylase plastidic - Oryza meridionalis
output	[SimpleEntity:R-ALL-4723658] CO2 [plastid stroma] [SimpleEntity:R-ALL-5606490] L-Lys [plastid stroma]
precedingEvent	[Reaction:R-OSA-1120389] diaminopimelate epimerase - Oryza sativa
schemaClass	Reaction
species	[Species:186860] Oryza sativa
stId	R-OSA-5606481
summation	[Summation:2879975] Meso-diaminopimelate is converted to L-lysine by enzymatic a...

Referrals

(hasEvent)

[Pathway:R-OSA-1119419] Lysine biosynthesis VI - Oryza sativa

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