Graph Database :: Data Schema

Graph Database :: Data Schema

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Entries: Summation
Identifier Name
9627500 The transcription of SNAC1 is upregulated by SERF1 transcri...
8934210 The transition of the shoot apical meristem (SAM) from veget...
6787906 The two Oryza sativa genes (OS01G0164900 , OS01G0164800 ) ar...
6787881 There are multiple Oryza sativa orthologs of A.thaliana PR1 ...
8879074 There are number of COR set of genes known in Arabidopsis. H...
6787132 These WRKY like genes are reported to interact with JAV1 lik...
2875024 Thiamin is converted to thiamine-phosphate by enzymatic acti...
2875028 Thiamine-phosphate is converted to thiamine-diphosphate by e...
5368066 Thiosulfate disproportionation plays a role in the cyanide d...
1112909 This complex/polymer has been computationally inferred (base...
9939646 This complex/polymer has been computationally inferred (based on PANTHER) from a complex/polymer involved in an event that has been demonstrated in another species.
1112910 This event has been computationally inferred from an event t...
9939644 This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on the homology mappings from Ensembl Compara. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 1% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.

More details and caveats of the event inference in Reactome.

9026141 This gene is a homolog of Arabidopsis Succinic-semialdehyde...
8868938 This gene is a homolog of Arabidopsis thaliana WALL ARE THIN...
9924317 This gene is also known as D17 and HDT1
9766855 This gene is known to be induced by dehyydration, and locate...
8868902 This is a homolog of Arabidopsis WAT1 (AT1G75500), that play...
5654783 This is a postulated event, carlactone or an intermediate is...
178797 This is the final step of tyrosine degradation. Fumarylaceto...
9826601 This is transcription factor ETHYLENE RESPONSE FACTOR 104 (O...
9029395 This reaction is spontaneous reaction.
8858144 This reaction occurrs under pH 5.0 in the extracellular spac...
8858113 This reaction occurrs under pH 7.0 in the cytosol.
2851770 This set of four gene products converts 2-hydroxyformononeti...
3239611 This set of four geneproducts converts 2'-hydroxypseudobapti...
9826595 This transcription factor is involved in tolerance to multip...
9025837 Three rice NA synthase genes (OsNAS1, OsNAS2, OsNAS3) are ex...
9029393 Threonine serves as precursor for isoleucine biosynthesis, h...
9924460 Tillers are specialized panicle-bearing branches of cereal c...
9611517 To resist pathogen invasion, plants have evolved several mec...
9930178 To survive under salt-stress conditions, plants use a variet...
6787140 Topless transcription repressor orthologs
3900256 Trans, trans,farnesyl diphosphate is converted into presqual...
3319245 Trans, trans-farnesyl diphosphate is converted into (E)-alph...
3319242 Trans, trans-farnesyl diphosphate is converted into (E)-beta...
3319244 Trans, trans-farnesyl diphosphate is converted into alpha-lo...
3319247 Trans, trans-farnesyl diphosphate is converted into delta-se...
3319241 Trans, trans-farnesyl diphosphate is converted into gamma-hu...
3319243 Trans, trans-farnesyl diphosphate is converted into longifol...
2850739 Trans, trans-farnesyl diphosphate is converted to 5-epi-aris...
3319492 Trans,trans-farnesyl diphosphate is converted to 2-cis,6-tra...
4789524 Trans,trans-farnesyl diphosphate is converted to geranylgera...
3240303 Trans-cinnamate is converted into (E)-cinnamoyl-CoA by enzym...
2850153 Trans-cinnamate is converted into 2-coumarate by enzymatic a...
2882016 Trans-cinnamate is converted into 4-coumarate by enzymatic a...
3308529 Trans-lycopene is converted into delta-carotene by enzymatic...
3308517 Trans-lycopene is converted into gamma-carotene by enzymatic...
2730810 Trans-zeatin is converted into trans-zeatin-7-N-glucoside by...
2750215 Trans-zeatin is converted into trans-zeatin-9-N-glucoside by...
2730818 Trans-zeatin is converted into trans-zeatin-O-glucoside by e...
2730806 Trans-zeatin-O-glucoside is converted into trans-zeatin-O-gl...
9826701 Transcription factor ETHYLENE RESPONSE FACTOR 29 (ERF29)/dro...
5632092 Transcription of DLT is repressed by BZR
5632259 Transcription of WRKY 11, 15, 18, 40, 60, which are negative...