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 Plant Reactome Pathway Database

  • About
    • What is Plant Reactome ?
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  • Content
    • Data Schema
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Schema > Pathway > Entries

Lysine degradation II

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created [InstanceEdit:10465988] Elser, Justin, 2025-03-25
dbId 10468046
displayName Lysine degradation II
eventOf
  • [Pathway:R-SPC-5655124] Amino acid catabolism - Synechocystis sp. PCC 6803
evidenceType [EvidenceType:9939645] inferred by electronic annotation
hasDiagram true
hasEvent
  • [Reaction:R-SPC-1121690] NADPH + L-Lys + alpha-ketoglutarate-----> SACN + H2O + NADP+ - Synechocystis sp. PCC 6803
inferredFrom
  • [Pathway:R-OSA-1119365] Lysine degradation II - Oryza sativa
isInDisease false
isInferred true
name
  • Lysine degradation II
  • pathway99564
releaseDate 2025-02-15
schemaClass Pathway
species
  • [Species:9030252] Synechocystis sp. PCC 6803
stId R-SPC-1119365
summation
  • [Summation:9939644] This event has been computationally inferred from an event that has been demonstrated in another species.

    The inference is based on the homology mappings from Ensembl Compara. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 1% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.

    More details and caveats of the event inference in Reactome.

Referrals

(hasEvent)
  • [Pathway:R-SPC-5655124] Amino acid catabolism - Synechocystis sp. PCC 6803
(inferredTo)
  • [Pathway:R-OSA-1119365] Lysine degradation II - Oryza sativa
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