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TF network involved in salinity response

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authored	[InstanceEdit:9766791] Naithani, Sushma, 2022-02-07 [InstanceEdit:9766788] El-Husseini, Sarah, 2022-02-07
compartment	[Compartment:7660] nucleoplasm
created	[InstanceEdit:9766846] Naithani, Sushma, 2022-02-24
dbId	9766881
displayName	TF network involved in salinity response
eventOf	[Pathway:R-OSA-9638808] Response to salinity - Oryza sativa
hasDiagram	true
hasEvent	[BlackBoxEvent:R-OSA-9766880] Expression of OsLEA17 - Oryza sativa [BlackBoxEvent:R-OSA-9766828] Expression of OsSAPK1 - Oryza sativa [BlackBoxEvent:R-OSA-9766844] Expression of OsbZIP46 - Oryza sativa [BlackBoxEvent:R-OSA-9766864] Expression of ASR5 - Oryza sativa [BlackBoxEvent:R-OSA-9766816] Expression of DI19-6 - Oryza sativa [BlackBoxEvent:R-OSA-9766847] Expression of DREB1A - Oryza sativa [BlackBoxEvent:R-OSA-9766877] Expression of DREB1C - Oryza sativa [BlackBoxEvent:R-OSA-9766821] Expression of DREB1G - Oryza sativa [BlackBoxEvent:R-OSA-9766882] Expression of DREB2B - Oryza sativa [BlackBoxEvent:R-OSA-9766862] Expression of LEA19 - Oryza sativa [BlackBoxEvent:R-OSA-9766812] Expression of MYB110 - Oryza sativa [BlackBoxEvent:R-OSA-9766856] Expression of Os02g0831300 - Oryza sativa [BlackBoxEvent:R-OSA-9766822] Expression of OsSAP1 - Oryza sativa [BlackBoxEvent:R-OSA-9766850] Expression of OsWRKY116 - Oryza sativa [BlackBoxEvent:R-OSA-9766875] Expression of OsWRKY17 - Oryza sativa [BlackBoxEvent:R-OSA-9766865] Expression of OsWRKY21 - Oryza sativa [BlackBoxEvent:R-OSA-9766866] Expression of OsWRKY42 - Oryza sativa [BlackBoxEvent:R-OSA-9766832] Expression of OsWRKY8 - Oryza sativa [BlackBoxEvent:R-OSA-9766874] Expression of OsbZIP72 - Oryza sativa [BlackBoxEvent:R-OSA-9766840] Expression of PP2C 30 - Oryza sativa [BlackBoxEvent:R-OSA-9766884] Expression of OsNAC2 - Oryza sativa [BlackBoxEvent:R-OSA-9930311] Expression of OsDREB2A - Oryza sativa [BlackBoxEvent:R-OSA-9629751] Expression of SNAC1 in response to drought and salinity - Oryza sativa [BlackBoxEvent:R-OSA-9930283] Expression of MPK5 - Oryza sativa [BlackBoxEvent:R-OSA-9930157] Expression of MPK8 - Oryza sativa [BlackBoxEvent:R-OSA-9930277] Expression of MPK15 - Oryza sativa [BlackBoxEvent:R-OSA-9930221] Expression of ZFP179 - Oryza sativa [BlackBoxEvent:R-OSA-9930211] Expression of ZFP182 - Oryza sativa [BlackBoxEvent:R-OSA-9930261] Expression of OsNAC3 in response to drought and salinity - Oryza sativa [BlackBoxEvent:R-OSA-9930245] Expression of RH1 - Oryza sativa [BlackBoxEvent:R-OSA-9930263] Expression of RH2 - Oryza sativa [BlackBoxEvent:R-OSA-9930234] Expression of Os12g0169300 (OsGST-3) - Oryza sativa [BlackBoxEvent:R-OSA-9930227] Expression of OsERF096 - Oryza sativa [BlackBoxEvent:R-OSA-9930288] Expression of OsRPR1 - Oryza sativa [BlackBoxEvent:R-OSA-9930146] Expression of OsOFP14 - Oryza sativa [BlackBoxEvent:R-OSA-9930186] Expression of OsERF101 (OsRAP2.6) - Oryza sativa [BlackBoxEvent:R-OSA-9930166] Expression of SNAC2 (OsNAC6) - Oryza sativa [BlackBoxEvent:R-OSA-9930219] Transcription of OsAP37 in response to salt stress - Oryza sativa [BlackBoxEvent:R-OSA-9930285] Prevention of water loss and stomata closure in response to salinity - Oryza sativa [BlackBoxEvent:R-OSA-9930266] Expression of OsAB15 - Oryza sativa [BlackBoxEvent:R-OSA-9930250] Expression of OsWRKY13 - Oryza sativa [BlackBoxEvent:R-OSA-9930199] Expression of ACA7 - Oryza sativa [BlackBoxEvent:R-OSA-9930303] Transcription of OsNAC1/OMTN1 in response to salinity - Oryza sativa [BlackBoxEvent:R-OSA-9930173] Transcription of OsNAC10 in response to salinity - Oryza sativa [BlackBoxEvent:R-OSA-9930220] Transcription of ONAC131 in response to salinity - Oryza sativa [BlackBoxEvent:R-OSA-9930153] Expression of NAC39 in response to drought and salinity - Oryza sativa
isInDisease	false
isInferred	false
literatureReference	[LiteratureReference:9930274] A NAC transcription factor OsNAC3 positively regulates ABA response and salt tolerance in rice [LiteratureReference:9766799] Identification of OsbZIP72 as a positive regulator of ABA response and drought tolerance in rice [LiteratureReference:9930272] A bZIP transcription factor, OsABI5, is involved in rice fertility and stress tolerance [LiteratureReference:4415071] A rice orthologue of the ABA receptor, OsPYL/RCAR5, is a positive regulator of the ABA signal transduction pathway in seed germination and early seedling growth [LiteratureReference:6788173] A rice transient assay system identifies a novel domain in NRR required for interaction with NH1/OsNPR1 and inhibition of NH1-mediated transcriptional activation [LiteratureReference:9640984] Characterization of transcription factor gene SNAC2 conferring cold and salt tolerance in rice [LiteratureReference:9930202] Comparative transcriptome and metabolome profiling reveal molecular mechanisms underlying OsDRAP1-mediated salt tolerance in rice [LiteratureReference:9930253] Comparative transcriptomics of three Poaceae species reveals patterns of gene expression evolution [LiteratureReference:5632108] DWARF AND LOW-TILLERING acts as a direct downstream target of a GSK3/SHAGGY-like kinase to mediate brassinosteroid responses in rice [LiteratureReference:8986681] EAT1 promotes tapetal cell death by regulating aspartic proteases during male reproductive development in rice [LiteratureReference:9930269] GS9 acts as a transcriptional activator to regulate rice grain shape and appearance quality [LiteratureReference:9639169] New insights into aluminum tolerance in rice: the ASR5 protein binds the STAR1 promoter and other aluminum-responsive genes [LiteratureReference:9930182] OsNAC2 encoding a NAC transcription factor that affects plant height through mediating the gibberellic acid pathway in rice [LiteratureReference:9930203] OsNAC2 positively affects salt-induced cell death and binds to the OsAP37 and OsCOX11 promoters [LiteratureReference:9930158] Osa-miR1320 targets the ERF transcription factor OsERF096 to regulate cold tolerance via JA-mediated signaling [LiteratureReference:9627502] Overexpressing a NAM, ATAF, and CUC (NAC) transcription factor enhances drought resistance and salt tolerance in rice [LiteratureReference:9930238] Overexpression of a NAC-domain protein promotes shoot branching in rice [LiteratureReference:9930229] Overexpression of the Transcription Factor Gene OsSTAP1 Increases Salt Tolerance in Rice [LiteratureReference:9930228] Retrogenes in rice (Oryza sativa L. ssp. japonica) exhibit correlated expression with their source genes [LiteratureReference:9639187] Rice ASR1 and ASR5 are complementary transcription factors regulating aluminium responsive genes [LiteratureReference:9930210] Rice proteomics: recent developments and analysis of nuclear proteins [LiteratureReference:9636731] Root-specific expression of OsNAC10 improves drought tolerance and grain yield in rice under field drought conditions [LiteratureReference:9930159] Salt-responsive ERF1 regulates reactive oxygen species-dependent signaling during the initial response to salt stress in rice [LiteratureReference:9766790] The NAC-type transcription factor OsNAC2 regulates ABA-dependent genes and abiotic stress tolerance in rice
modified	[InstanceEdit:11540225] Elser, Justin, 2025-03-27
name	TF network involved in salinity response
orthologousEvent	[Pathway:R-BNA-9766881] TF network involved in salinity response - Brassica napus [Pathway:R-CST-9766881] TF network involved in salinity response - Camelina sativa [Pathway:R-FEX-9766881] TF network involved in salinity response - Fraxinus excelsior (European ash) [Pathway:R-OGL-9766881] TF network involved in salinity response - Oryza glaberrima [Pathway:R-HVU-9766881] TF network involved in salinity response - Hordeum vulgare [Pathway:R-TCA-9766881] TF network involved in salinity response - Theobroma cacao [Pathway:R-PTI-9766881] TF network involved in salinity response - Populus trichocarpa [Pathway:R-AHY-9766881] TF network involved in salinity response - Arachis hypogaea [Pathway:R-CSC-9766881] TF network involved in salinity response - Cannabis sativa [Pathway:R-ORU-9766881] TF network involved in salinity response - Oryza rufipogon [Pathway:R-CCL-9766881] TF network involved in salinity response - Citrus clementina [Pathway:R-QLO-9766881] TF network involved in salinity response - Quercus lobata [Pathway:R-BOL-9766881] TF network involved in salinity response - Brassica oleracea [Pathway:R-OLO-9766881] TF network involved in salinity response - Oryza longistaminata [Pathway:R-ECG-9766881] TF network involved in salinity response - Echinochloa crus-galli [Pathway:R-CLA-9766881] TF network involved in salinity response - Citrullus lanatus [Pathway:R-PPE-9766881] TF network involved in salinity response - Prunus persica [Pathway:R-SHI-9766881] TF network involved in salinity response - Salvia hispanica [Pathway:R-LST-9766881] TF network involved in salinity response - Lathyrus sativus [Pathway:R-RCH-9766881] TF network involved in salinity response - Rosa chinensis [Pathway:R-SMO-9766881] TF network involved in salinity response - Selaginella moellendorffii [Pathway:R-TDI-9766881] TF network involved in salinity response - Triticum dicoccoides [Pathway:R-CCP-9766881] TF network involved in salinity response - Corchorus capsularis [Pathway:R-SBI-9766881] TF network involved in salinity response - Sorghum bicolor [Pathway:R-ADU-9766881] TF network involved in salinity response - Arachis duranensis [Pathway:R-GRA-9766881] TF network involved in salinity response - Gossypium raimondii [Pathway:R-NNU-9766881] TF network involved in salinity response - Nelumbo nucifera [Pathway:R-NAT-9766881] TF network involved in salinity response - Nicotiana attenuata [Pathway:R-DCA-9766881] TF network involved in salinity response - Daucus carota [Pathway:R-PHH-9766881] TF network involved in salinity response - Panicum hallii var. hallii ("HAL2") [Pathway:R-TTU-9766881] TF network involved in salinity response - Triticum turgidum [Pathway:R-JCU-9766881] TF network involved in salinity response - Jatropha curcas [Pathway:R-PVU-9766881] TF network involved in salinity response - Phaseolus vulgaris [Pathway:R-MPO-9766881] TF network involved in salinity response - Marchantia polymorpha [Pathway:R-PAB-9766881] TF network involved in salinity response - Picea abies [Pathway:R-GMA-9766881] TF network involved in salinity response - Glycine max [Pathway:R-CCI-9766881] TF network involved in salinity response - Corymbia citriodora [Pathway:R-ZMA-9766881] TF network involved in salinity response - Zea mays [Pathway:R-CCA-9766881] TF network involved in salinity response - Cajanus cajan [Pathway:R-LPR-9766881] TF network involved in salinity response - Lolium perenne [Pathway:R-COL-9766881] TF network involved in salinity response - Corchorus olitorius [Pathway:R-BDI-9766881] TF network involved in salinity response - Brachypodium distachyon [Pathway:R-HAN-9766881] TF network involved in salinity response - Helianthus annuus [Pathway:R-MDO-9766881] TF network involved in salinity response - Malus domestica [Pathway:R-BRA-9766881] TF network involved in salinity response - Brassica rapa [Pathway:R-CRU-9766881] TF network involved in salinity response - Capsella rubella [Pathway:R-VUN-9766881] TF network involved in salinity response - Vigna unguiculata [Pathway:R-MES-9766881] TF network involved in salinity response - Manihot esculenta [Pathway:R-ITR-9766881] TF network involved in salinity response - Ipomoea triloba [Pathway:R-CCR-9766881] TF network involved in salinity response - Chondrus crispus [Pathway:R-CBA-9766881] TF network involved in salinity response - Chara braunii [Pathway:R-TTI-9766881] TF network involved in salinity response - Triticum timopheevii subsp. timopheevii [Pathway:R-AHA-9766881] TF network involved in salinity response - Arabidopsis halleri [Pathway:R-ECU-9766881] TF network involved in salinity response - Eragrostis curvula [Pathway:R-OMI-9766881] TF network involved in salinity response - Oryza minuta [Pathway:R-OPU-9766881] TF network involved in salinity response - Oryza punctata [Pathway:R-CCD-9766881] TF network involved in salinity response - Cynara cardunculus var. scolymus [Pathway:R-PSA-9766881] TF network involved in salinity response - Pisum sativum [Pathway:R-PPA-9766881] TF network involved in salinity response - Physcomitrella patens [Pathway:R-PSO-9766881] TF network involved in salinity response - Papaver somniferum [Pathway:R-ACH-9766881] TF network involved in salinity response - Actinidia chinensis [Pathway:R-LSA-9766881] TF network involved in salinity response - Lactuca sativa [Pathway:R-ATR-9766881] TF network involved in salinity response - Amborella trichopoda [Pathway:R-TUR-9766881] TF network involved in salinity response - Triticum urartu [Pathway:R-DEX-9766881] TF network involved in salinity response - Digitaria exilis [Pathway:R-ZJA-9766881] TF network involved in salinity response - Zoysia japonica [Pathway:R-CAN-9766881] TF network involved in salinity response - Capsicum annuum [Pathway:R-SLY-9766881] TF network involved in salinity response - Solanum lycopersicum [Pathway:R-QSU-9766881] TF network involved in salinity response - Quercus suber [Pathway:R-OBA-9766881] TF network involved in salinity response - Oryza barthii [Pathway:R-SSP-9766881] TF network involved in salinity response - Saccharum spontaneum [Pathway:R-SCR-9766881] TF network involved in salinity response - Secale cereale [Pathway:R-MTR-9766881] TF network involved in salinity response - Medicago truncatula [Pathway:R-BVU-9766881] TF network involved in salinity response - Beta vulgaris [Pathway:R-SVI-9766881] TF network involved in salinity response - Setaria viridis [Pathway:R-ATA-9766881] TF network involved in salinity response - Aegilops tauschii [Pathway:R-OME-9766881] TF network involved in salinity response - Oryza meridionalis [Pathway:R-VVN-9766881] TF network involved in salinity response - Vitis vinifera [Pathway:R-PAV-9766881] TF network involved in salinity response - Prunus avium [Pathway:R-CSA-9766881] TF network involved in salinity response - Cucumis sativus [Pathway:R-ZMY-9766881] TF network involved in salinity response - Zea mays ver5 [Pathway:R-LPE-9766881] TF network involved in salinity response - Leersia perrieri [Pathway:R-PTA-9766881] TF network involved in salinity response - Pinus taeda [Pathway:R-TAE-9766881] TF network involved in salinity response - Triticum aestivum [Pathway:R-GSU-9766881] TF network involved in salinity response - Galdieria sulphuraria [Pathway:R-ATH-9766881] TF network involved in salinity response - Arabidopsis thaliana [Pathway:R-VAN-9766881] TF network involved in salinity response - Vigna angularis [Pathway:R-CSK-9766881] TF network involved in salinity response - Cannabis sativa subsp. indica [Pathway:R-OGU-9766881] TF network involved in salinity response - Oryza glumaepatula [Pathway:R-SIN-9766881] TF network involved in salinity response - Sesamum indicum [Pathway:R-PDA-9766881] TF network involved in salinity response - Phoenix dactylifera [Pathway:R-CCN-9766881] TF network involved in salinity response - Coffea canephora [Pathway:R-VRA-9766881] TF network involved in salinity response - Vigna radiata [Pathway:R-STU-9766881] TF network involved in salinity response - Solanum tuberosum [Pathway:R-JRE-9766881] TF network involved in salinity response - Juglans regia [Pathway:R-VFA-9766881] TF network involved in salinity response - Vicia faba var. faba [Pathway:R-SIT-9766881] TF network involved in salinity response - Setaria italica [Pathway:R-GSO-9766881] TF network involved in salinity response - Glycine soja [Pathway:R-PVE-9766881] TF network involved in salinity response - Pistacia vera [Pathway:R-OBR-9766881] TF network involved in salinity response - Oryza brachyantha [Pathway:R-EGR-9766881] TF network involved in salinity response - Eucalyptus grandis [Pathway:R-FCR-9766881] TF network involved in salinity response - Ficus carica [Pathway:R-BJU-9766881] TF network involved in salinity response - Brassica juncea [Pathway:R-CQI-9766881] TF network involved in salinity response - Chenopodium quinoa [Pathway:R-OES-9766881] TF network involved in salinity response - Olea europaea var. sylvestris [Pathway:R-ASA-9766881] TF network involved in salinity response - Avena sativa [Pathway:R-TPR-9766881] TF network involved in salinity response - Trifolium pratense [Pathway:R-ONI-9766881] TF network involved in salinity response - Oryza nivara [Pathway:R-PHA-9766881] TF network involved in salinity response - Panicum hallii ("FIL2") [Pathway:R-MAC-9766881] TF network involved in salinity response - Musa acuminata [Pathway:R-OSI-9766881] TF network involved in salinity response - Oryza sativa Indica Group [Pathway:R-CML-9766881] TF network involved in salinity response - Cucumis melo [Pathway:R-TSP-9766881] TF network involved in salinity response - Triticum spelta subsp. spelta [Pathway:R-OAU-9766881] TF network involved in salinity response - Oryza australiensis [Pathway:R-ETE-9766881] TF network involved in salinity response - Eragrostis tef [Pathway:R-AOF-9766881] TF network involved in salinity response - Asparagus officinalis [Pathway:R-OGR-9766881] TF network involved in salinity response - Oryza meyeriana var. granulata [Pathway:R-AUM-9766881] TF network involved in salinity response - Aegilops umbellulata [Pathway:R-ALY-9766881] TF network involved in salinity response - Arabidopsis lyrata [Pathway:R-NCO-9766881] TF network involved in salinity response - Nymphaea colorata [Pathway:R-CRE-9766881] TF network involved in salinity response - Chlamydomonas reinhardtii [Pathway:R-ACO-9766881] TF network involved in salinity response - Ananas comosus [Pathway:R-LAN-9766881] TF network involved in salinity response - Lupinus angustifolius [Pathway:R-DRO-9766881] TF network involved in salinity response - Dioscorea rotundata [Pathway:R-OOF-9766881] TF network involved in salinity response - Oryza officinalis [Pathway:R-OEU-9766881] TF network involved in salinity response - Olea europaea [Pathway:R-CAR-9766881] TF network involved in salinity response - Cicer arietinum [Pathway:R-PED-9766881] TF network involved in salinity response - Phyllostachys edulis
releaseDate	2025-03-20
releaseStatus	NEW
reviewed	[InstanceEdit:9930251] Naithani, Sushma, 2024-11-25
revised	[InstanceEdit:9766788] El-Husseini, Sarah, 2022-02-07 [InstanceEdit:9930251] Naithani, Sushma, 2024-11-25
schemaClass	Pathway
species	[Species:186860] Oryza sativa
stId	R-OSA-9766881
summation	[Summation:9930178] To survive under salt-stress conditions, plants use a variet...

Referrals

(hasEvent)

[Pathway:R-OSA-9638808] Response to salinity - Oryza sativa