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Lycopene catabolism

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authored	[InstanceEdit:9608539] Gupta, Parul, 2018-05-16
compartment	[Compartment:1141] plastid stroma
created	[InstanceEdit:9609342] Gupta, Parul, 2018-05-22
dbId	9609352
displayName	Lycopene catabolism
eventOf	[Pathway:R-OSA-2744344] Secondary metabolism - Oryza sativa
goBiologicalProcess	[GO_BiologicalProcess:2455318] lycopene catabolic process
hasDiagram	true
hasEvent	[Reaction:R-OSA-9609348] 4,8,13-trimethylhexadeca-heptaenedial biosynthesis from lycopene - Oryza sativa [Reaction:R-OSA-9609363] 4,9,13-trimethyltetradeca-2,4,6,8,10,12-hexaene-1,14-dial biosynthesis from lycopene - Oryza sativa [Reaction:R-OSA-9609345] 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial biosynthesis from lycopene - Oryza sativa [Reaction:R-OSA-9609358] Bixin aldehyde biosynthesis from lycopene - Oryza sativa
isInDisease	false
isInferred	false
literatureReference	[LiteratureReference:9609353] The carotenoid dioxygenase gene family in maize, sorghum, and rice [LiteratureReference:9609339] Characterization of the rice carotenoid cleavage dioxygenase 1 reveals a novel route for geranial biosynthesis [LiteratureReference:9609349] The carotenoid cleavage dioxygenase 1 enzyme has broad substrate specificity, cleaving multiple carotenoids at two different bond positions [LiteratureReference:9609355] Biosynthesis of the Food and Cosmetic Plant Pigment Bixin (Annatto)
modified	[InstanceEdit:11529250] Elser, Justin, 2025-03-27
name	Lycopene catabolism Lycopene cleavage Lycopene degradation
orthologousEvent	[Pathway:R-SBI-9609352] Lycopene catabolism - Sorghum bicolor [Pathway:R-PHA-9609352] Lycopene catabolism - Panicum hallii ("FIL2") [Pathway:R-MAC-9609352] Lycopene catabolism - Musa acuminata [Pathway:R-FCR-9609352] Lycopene catabolism - Ficus carica [Pathway:R-MDO-9609352] Lycopene catabolism - Malus domestica [Pathway:R-BRA-9609352] Lycopene catabolism - Brassica rapa [Pathway:R-SIT-9609352] Lycopene catabolism - Setaria italica [Pathway:R-ONI-9609352] Lycopene catabolism - Oryza nivara [Pathway:R-OES-9609352] Lycopene catabolism - Olea europaea var. sylvestris [Pathway:R-NCO-9609352] Lycopene catabolism - Nymphaea colorata [Pathway:R-CCA-9609352] Lycopene catabolism - Cajanus cajan [Pathway:R-VRA-9609352] Lycopene catabolism - Vigna radiata [Pathway:R-CCI-9609352] Lycopene catabolism - Corymbia citriodora [Pathway:R-CQI-9609352] Lycopene catabolism - Chenopodium quinoa [Pathway:R-MES-9609352] Lycopene catabolism - Manihot esculenta [Pathway:R-ITR-9609352] Lycopene catabolism - Ipomoea triloba [Pathway:R-VAN-9609352] Lycopene catabolism - Vigna angularis [Pathway:R-SCR-9609352] Lycopene catabolism - Secale cereale [Pathway:R-CML-9609352] Lycopene catabolism - Cucumis melo [Pathway:R-CSC-9609352] Lycopene catabolism - Cannabis sativa [Pathway:R-CSA-9609352] Lycopene catabolism - Cucumis sativus [Pathway:R-ASA-9609352] Lycopene catabolism - Avena sativa [Pathway:R-RCH-9609352] Lycopene catabolism - Rosa chinensis [Pathway:R-TAE-9609352] Lycopene catabolism - Triticum aestivum [Pathway:R-LPE-9609352] Lycopene catabolism - Leersia perrieri [Pathway:R-CCN-9609352] Lycopene catabolism - Coffea canephora [Pathway:R-OBA-9609352] Lycopene catabolism - Oryza barthii [Pathway:R-AUM-9609352] Lycopene catabolism - Aegilops umbellulata [Pathway:R-PTI-9609352] Lycopene catabolism - Populus trichocarpa [Pathway:R-SLY-9609352] Lycopene catabolism - Solanum lycopersicum [Pathway:R-CAN-9609352] Lycopene catabolism - Capsicum annuum [Pathway:R-PSO-9609352] Lycopene catabolism - Papaver somniferum [Pathway:R-VVN-9609352] Lycopene catabolism - Vitis vinifera [Pathway:R-BOL-9609352] Lycopene catabolism - Brassica oleracea [Pathway:R-LSA-9609352] Lycopene catabolism - Lactuca sativa [Pathway:R-ECG-9609352] Lycopene catabolism - Echinochloa crus-galli [Pathway:R-TDI-9609352] Lycopene catabolism - Triticum dicoccoides [Pathway:R-CCL-9609352] Lycopene catabolism - Citrus clementina [Pathway:R-ATA-9609352] Lycopene catabolism - Aegilops tauschii [Pathway:R-FEX-9609352] Lycopene catabolism - Fraxinus excelsior (European ash) [Pathway:R-DRO-9609352] Lycopene catabolism - Dioscorea rotundata [Pathway:R-LPR-9609352] Lycopene catabolism - Lolium perenne [Pathway:R-SVI-9609352] Lycopene catabolism - Setaria viridis [Pathway:R-ETE-9609352] Lycopene catabolism - Eragrostis tef [Pathway:R-GMA-9609352] Lycopene catabolism - Glycine max [Pathway:R-TSP-9609352] Lycopene catabolism - Triticum spelta subsp. spelta [Pathway:R-CST-9609352] Lycopene catabolism - Camelina sativa [Pathway:R-ALY-9609352] Lycopene catabolism - Arabidopsis lyrata [Pathway:R-BJU-9609352] Lycopene catabolism - Brassica juncea [Pathway:R-LAN-9609352] Lycopene catabolism - Lupinus angustifolius [Pathway:R-CCD-9609352] Lycopene catabolism - Cynara cardunculus var. scolymus [Pathway:R-TTU-9609352] Lycopene catabolism - Triticum turgidum [Pathway:R-OBR-9609352] Lycopene catabolism - Oryza brachyantha [Pathway:R-PVE-9609352] Lycopene catabolism - Pistacia vera [Pathway:R-VFA-9609352] Lycopene catabolism - Vicia faba var. faba [Pathway:R-JRE-9609352] Lycopene catabolism - Juglans regia [Pathway:R-PVU-9609352] Lycopene catabolism - Phaseolus vulgaris [Pathway:R-ADU-9609352] Lycopene catabolism - Arachis duranensis [Pathway:R-OSI-9609352] Lycopene catabolism - Oryza sativa Indica Group [Pathway:R-EGR-9609352] Lycopene catabolism - Eucalyptus grandis [Pathway:R-QLO-9609352] Lycopene catabolism - Quercus lobata [Pathway:R-TPR-9609352] Lycopene catabolism - Trifolium pratense [Pathway:R-AHY-9609352] Lycopene catabolism - Arachis hypogaea [Pathway:R-LST-9609352] Lycopene catabolism - Lathyrus sativus [Pathway:R-MPO-9609352] Lycopene catabolism - Marchantia polymorpha [Pathway:R-OGL-9609352] Lycopene catabolism - Oryza glaberrima [Pathway:R-ATH-9609352] Lycopene catabolism - Arabidopsis thaliana [Pathway:R-VUN-9609352] Lycopene catabolism - Vigna unguiculata [Pathway:R-DCA-9609352] Lycopene catabolism - Daucus carota [Pathway:R-PPE-9609352] Lycopene catabolism - Prunus persica [Pathway:R-PPA-9609352] Lycopene catabolism - Physcomitrella patens [Pathway:R-PHH-9609352] Lycopene catabolism - Panicum hallii var. hallii ("HAL2") [Pathway:R-OGU-9609352] Lycopene catabolism - Oryza glumaepatula [Pathway:R-GSO-9609352] Lycopene catabolism - Glycine soja [Pathway:R-NAT-9609352] Lycopene catabolism - Nicotiana attenuata [Pathway:R-BVU-9609352] Lycopene catabolism - Beta vulgaris [Pathway:R-HVU-9609352] Lycopene catabolism - Hordeum vulgare [Pathway:R-SSP-9609352] Lycopene catabolism - Saccharum spontaneum [Pathway:R-ZMY-9609352] Lycopene catabolism - Zea mays ver5 [Pathway:R-SMO-9609352] Lycopene catabolism - Selaginella moellendorffii [Pathway:R-ATR-9609352] Lycopene catabolism - Amborella trichopoda [Pathway:R-GRA-9609352] Lycopene catabolism - Gossypium raimondii [Pathway:R-ACO-9609352] Lycopene catabolism - Ananas comosus [Pathway:R-TCA-9609352] Lycopene catabolism - Theobroma cacao [Pathway:R-BNA-9609352] Lycopene catabolism - Brassica napus [Pathway:R-DEX-9609352] Lycopene catabolism - Digitaria exilis [Pathway:R-ECU-9609352] Lycopene catabolism - Eragrostis curvula [Pathway:R-ACH-9609352] Lycopene catabolism - Actinidia chinensis [Pathway:R-ORU-9609352] Lycopene catabolism - Oryza rufipogon [Pathway:R-QSU-9609352] Lycopene catabolism - Quercus suber [Pathway:R-BDI-9609352] Lycopene catabolism - Brachypodium distachyon [Pathway:R-HAN-9609352] Lycopene catabolism - Helianthus annuus [Pathway:R-AHA-9609352] Lycopene catabolism - Arabidopsis halleri [Pathway:R-CCP-9609352] Lycopene catabolism - Corchorus capsularis [Pathway:R-CRE-9609352] Lycopene catabolism - Chlamydomonas reinhardtii [Pathway:R-TTI-9609352] Lycopene catabolism - Triticum timopheevii subsp. timopheevii [Pathway:R-MTR-9609352] Lycopene catabolism - Medicago truncatula [Pathway:R-OEU-9609352] Lycopene catabolism - Olea europaea [Pathway:R-PSA-9609352] Lycopene catabolism - Pisum sativum [Pathway:R-TUR-9609352] Lycopene catabolism - Triticum urartu [Pathway:R-ZMA-9609352] Lycopene catabolism - Zea mays [Pathway:R-OPU-9609352] Lycopene catabolism - Oryza punctata
schemaClass	Pathway
species	[Species:186860] Oryza sativa
stId	R-OSA-9609352
summation	[Summation:9609360] CCD1 has broad substrate specificity. It cleaves numerous cy...

Referrals

(hasEvent)

[Pathway:R-OSA-2744344] Secondary metabolism - Oryza sativa

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