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About
What is Plant Reactome ?
Team
Scientific Advisory Board
License Agreement
Disclaimer
Staff
Content
Data Schema
Release Summary
Docs
User Guide
Developer's Zone
Graph Database
Content Service
Pathways Overview
Pathway Diagrams
Data Model
Computational Inference
Linking to Us
Citing us
Tools
Pathway Browser
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Schema
>
EntityWithAccessionedSequence
>
Entries
COL4 [nucleoplasm]
Go to Details
authored
[InstanceEdit:8854459] Gupta, Parul, 2016-01-27
created
[InstanceEdit:8934132] Jaiswal, Pankaj, 2016-08-08
dbId
8934060
displayName
COL4 [nucleoplasm]
endCoordinate
-1
inDisease
false
inferredTo
[EntityWithAccessionedSequence:R-ECU-8934060] EJB05_20872 [nucleoplasm] - Eragrostis curvula
[EntityWithAccessionedSequence:R-PHH-8934060] GQ55_1G295800 [nucleoplasm] - Panicum hallii var. hallii ("HAL2")
[EntityWithAccessionedSequence:R-ECU-8934060-2] EJB05_20843 [nucleoplasm] - Eragrostis curvula
[DefinedSet:R-ECU-8934060-3] Homologues of COL4 [nucleoplasm] - Eragrostis curvula
[EntityWithAccessionedSequence:R-SSP-8934060] Sspon.04G0008520-4D [nucleoplasm] - Saccharum spontaneum
[EntityWithAccessionedSequence:R-ETE-8934060] Et_1A_008633 [nucleoplasm] - Eragrostis tef
[EntityWithAccessionedSequence:R-ETE-8934060-2] Et_1B_013445 [nucleoplasm] - Eragrostis tef
[DefinedSet:R-ETE-8934060-3] Homologues of COL4 [nucleoplasm] - Eragrostis tef
[EntityWithAccessionedSequence:R-TTU-8934060] TRITD6Av1G138000 [nucleoplasm] - Triticum turgidum
[EntityWithAccessionedSequence:R-ADU-8934060] Aradu.5RF5F [nucleoplasm] - Arachis duranensis
[EntityWithAccessionedSequence:R-ADU-8934060-2] Aradu.V9D7S [nucleoplasm] - Arachis duranensis
[EntityWithAccessionedSequence:R-ADU-8934060-3] Aradu.S156I [nucleoplasm] - Arachis duranensis
[EntityWithAccessionedSequence:R-ADU-8934060-4] Aradu.43J56 [nucleoplasm] - Arachis duranensis
[DefinedSet:R-ADU-8934060-5] Homologues of COL4 [nucleoplasm] - Arachis duranensis
[EntityWithAccessionedSequence:R-ATA-8934060] AET6Gv20580900 [nucleoplasm] - Aegilops tauschii
[EntityWithAccessionedSequence:R-BDI-8934060] BRADI_3g48447v3 [nucleoplasm] - Brachypodium distachyon
[EntityWithAccessionedSequence:R-HVU-8934060] HORVU.MOREX.r3.6HG0593470 [nucleoplasm] - Hordeum vulgare
[EntityWithAccessionedSequence:R-LPE-8934060] LPERR02G19270 [nucleoplasm] - Leersia perrieri
[EntityWithAccessionedSequence:R-OBA-8934060] OBART02G23690 [nucleoplasm] - Oryza barthii
[EntityWithAccessionedSequence:R-OBR-8934060] OB02G30990 [nucleoplasm] - Oryza brachyantha
[EntityWithAccessionedSequence:R-OGL-8934060] ORGLA02G0204800 [nucleoplasm] - Oryza glaberrima
[EntityWithAccessionedSequence:R-OGU-8934060] OGLUM02G24080 [nucleoplasm] - Oryza glumaepatula
[EntityWithAccessionedSequence:R-OME-8934060] OMERI02G23310 [nucleoplasm] - Oryza meridionalis
[EntityWithAccessionedSequence:R-ONI-8934060] ONIVA02G26540 [nucleoplasm] - Oryza nivara
[EntityWithAccessionedSequence:R-OPU-8934060] OPUNC02G21570 [nucleoplasm] - Oryza punctata
[EntityWithAccessionedSequence:R-ORU-8934060] ORUFI02G25130 [nucleoplasm] - Oryza rufipogon
[EntityWithAccessionedSequence:R-OSI-8934060] BGIOSGA008605 [nucleoplasm] - Oryza sativa Indica Group
[EntityWithAccessionedSequence:R-PHA-8934060] GQ55_1G295800 [nucleoplasm] - Panicum hallii ("FIL2")
[EntityWithAccessionedSequence:R-SBI-8934060] SORBI_3004G211200 [nucleoplasm] - Sorghum bicolor
[EntityWithAccessionedSequence:R-TAE-8934060] TraesCS6D02G202000 [nucleoplasm] - Triticum aestivum
[EntityWithAccessionedSequence:R-TAE-8934060-2] TraesCS6A02G218900 [nucleoplasm] - Triticum aestivum
[EntityWithAccessionedSequence:R-TAE-8934060-3] TraesCS6B02G248400 [nucleoplasm] - Triticum aestivum
[DefinedSet:R-TAE-8934060-4] Homologues of COL4 [nucleoplasm] - Triticum aestivum
[EntityWithAccessionedSequence:R-TDI-8934060] TRIDC6AG033880 [nucleoplasm] - Triticum dicoccoides
[EntityWithAccessionedSequence:R-TDI-8934060-2] TRIDC6BG040430 [nucleoplasm] - Triticum dicoccoides
[DefinedSet:R-TDI-8934060-3] Homologues of COL4 [nucleoplasm] - Triticum dicoccoides
[EntityWithAccessionedSequence:R-ZMA-8934060] Zm00001d017176 [nucleoplasm] - Zea mays
[EntityWithAccessionedSequence:R-SVI-8934060] SEVIR_1G232600v2 [nucleoplasm] - Setaria viridis
[EntityWithAccessionedSequence:R-DEX-8934060] Dexi1A01G0020090 [nucleoplasm] - Digitaria exilis
[EntityWithAccessionedSequence:R-DEX-8934060-2] Dexi1B01G0018800 [nucleoplasm] - Digitaria exilis
[DefinedSet:R-DEX-8934060-3] Homologues of COL4 [nucleoplasm] - Digitaria exilis
[EntityWithAccessionedSequence:R-ECG-8934060] scaffold194.179 [nucleoplasm] - Echinochloa crus-galli
[EntityWithAccessionedSequence:R-ECG-8934060-2] scaffold139.218 [nucleoplasm] - Echinochloa crus-galli
[EntityWithAccessionedSequence:R-ECG-8934060-3] scaffold17.289 [nucleoplasm] - Echinochloa crus-galli
[DefinedSet:R-ECG-8934060-4] Homologues of COL4 [nucleoplasm] - Echinochloa crus-galli
[EntityWithAccessionedSequence:R-LPR-8934060] KYUSg_chr6.17884 [nucleoplasm] - Lolium perenne
[EntityWithAccessionedSequence:R-SCR-8934060] SECCE6Rv1G0397690 [nucleoplasm] - Secale cereale
[EntityWithAccessionedSequence:R-AUM-8934060] AeUmb.TA1851.r1.4UG0020030 [nucleoplasm] - Aegilops umbellulata
[EntityWithAccessionedSequence:R-ASA-8934060] AVESA.00001b.r3.6Cg0003467 [nucleoplasm] - Avena sativa
[EntityWithAccessionedSequence:R-TSP-8934060] TraesTSP6B01G267800 [nucleoplasm] - Triticum spelta subsp. spelta
[EntityWithAccessionedSequence:R-TSP-8934060-2] TraesTSP6A01G197700 [nucleoplasm] - Triticum spelta subsp. spelta
[EntityWithAccessionedSequence:R-TSP-8934060-3] TraesTSP6D01G215000 [nucleoplasm] - Triticum spelta subsp. spelta
[DefinedSet:R-TSP-8934060-4] Homologues of COL4 [nucleoplasm] - Triticum spelta subsp. spelta
[EntityWithAccessionedSequence:R-TTI-8934060] Tritim_EIv0.3_1321030 [nucleoplasm] - Triticum timopheevii subsp. timopheevii
[EntityWithAccessionedSequence:R-TTI-8934060-2] Tritim_EIv0.3_1212150 [nucleoplasm] - Triticum timopheevii subsp. timopheevii
[DefinedSet:R-TTI-8934060-3] Homologues of COL4 [nucleoplasm] - Triticum timopheevii subsp. timopheevii
name
COL4
producedByEvent
[BlackBoxEvent:R-OSA-8934134] Expression of COL4 - Oryza sativa
referenceEntity
[ReferenceGeneProduct:8934083] UniProt:Q6K9C5 Os02g0610500
referenceType
ReferenceGeneProduct
schemaClass
EntityWithAccessionedSequence
species
[Species:186860] Oryza sativa
stId
R-OSA-8934060
startCoordinate
1
summation
[Summation:8934131] The rice genome contains 16 OsCOL genes (Griffiths et al., 2...
Referrals
(output)
[BlackBoxEvent:R-OSA-8934134] Expression of COL4 - Oryza sativa
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