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Starch biosynthesis

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authored	[InstanceEdit:9918176] Naithani, Sushma, 2024-07-22
created	[InstanceEdit:1164949] Wu, Guanming, 2010-12-11
dbId	1119477
displayName	Starch biosynthesis
edited	[InstanceEdit:2960185] Beorchia, Dylan, 2012-12-13
eventOf	[Pathway:R-OSA-9928372] Root gravitropism - Oryza sativa [Pathway:R-OSA-9626305] Regulatory network of nutrient accumulation - Oryza sativa [Pathway:R-OSA-2883407] Carbohydrate metabolism - Oryza sativa
goBiologicalProcess	[GO_BiologicalProcess:8746] starch biosynthetic process
hasDiagram	true
hasEvent	[Reaction:R-OSA-2960193] Glucose-6-phosphate isomerase - Oryza sativa [Reaction:R-OSA-1119995] Phosphoglucomutase - Oryza sativa [Reaction:R-OSA-1120805] Starch synthase (amyloplast) - Oryza sativa [Reaction:R-OSA-1120390] Amylopectin formation is catalyzed by the starch branching enzyme (SBE), starch de-branching (DBE) enzymes/Isoamylase (ISA), and pullulanase. - Oryza sativa [Reaction:R-OSA-9918166] Phosphoglucomutase (plastid stroma) - Oryza sativa [Reaction:R-OSA-9918143] Glucose-1-phosphate adenylyltransferase (amyloplast) - Oryza sativa [BlackBoxEvent:R-OSA-9918155] Glucose-6-phosphate/phosphate transport - Oryza sativa [BlackBoxEvent:R-OSA-9918209] Transport of G1P - Oryza sativa [Reaction:R-OSA-1120965] ADP-glucose pyrophosphorylase (AGPase) - Oryza sativa [Reaction:R-OSA-9918197] Transport of ADP-glucose - Oryza sativa [Reaction:R-OSA-9918163] Transport of ADP from amyloplast to cytosol - Oryza sativa [Reaction:R-OSA-9918178] Amylose biosynthesis by Granule-Bound Starch Synthase (GBSS) - Oryza sativa [Reaction:R-OSA-9918213] Starch formation - Oryza sativa
isInDisease	false
isInferred	false
literatureReference	[LiteratureReference:9918151] Mapping the functional roles of cap cells in the response of Arabidopsis primary roots to gravity [LiteratureReference:9918158] Plant gravity sensing [LiteratureReference:9918221] Sporophytic control of anther development and male fertility by glucose-6-phosphate/phosphate translocator 1 (OsGPT1) in rice
modified	[InstanceEdit:11540225] Elser, Justin, 2025-03-27
name	Starch biosynthesis pathway101607
orthologousEvent	[Pathway:R-PTA-1119477] Starch biosynthesis - Pinus taeda [Pathway:R-LPR-1119477] Starch biosynthesis - Lolium perenne [Pathway:R-EGR-1119477] Starch biosynthesis - Eucalyptus grandis [Pathway:R-CSI-1119477] Starch biosynthesis - Citrus sinensis [Pathway:R-CML-1119477] Starch biosynthesis - Cucumis melo [Pathway:R-OAU-1119477] Starch biosynthesis - Oryza australiensis [Pathway:R-ASA-1119477] Starch biosynthesis - Avena sativa [Pathway:R-SIT-1119477] Starch biosynthesis - Setaria italica [Pathway:R-OMI-1119477] Starch biosynthesis - Oryza minuta [Pathway:R-MES-1119477] Starch biosynthesis - Manihot esculenta [Pathway:R-CCP-1119477] Starch biosynthesis - Corchorus capsularis [Pathway:R-MPO-1119477] Starch biosynthesis - Marchantia polymorpha [Pathway:R-RCH-1119477] Starch biosynthesis - Rosa chinensis [Pathway:R-JRE-1119477] Starch biosynthesis - Juglans regia [Pathway:R-NCO-1119477] Starch biosynthesis - Nymphaea colorata [Pathway:R-BRA-1119477] Starch biosynthesis - Brassica rapa [Pathway:R-PDA-1119477] Starch biosynthesis - Phoenix dactylifera [Pathway:R-TPR-1119477] Starch biosynthesis - Trifolium pratense [Pathway:R-MAC-1119477] Starch biosynthesis - Musa acuminata [Pathway:R-BVU-1119477] Starch biosynthesis - Beta vulgaris [Pathway:R-CRE-1119477] Starch biosynthesis - Chlamydomonas reinhardtii [Pathway:R-CQI-1119477] Starch biosynthesis - Chenopodium quinoa [Pathway:R-OME-1119477] Starch biosynthesis - Oryza meridionalis [Pathway:R-ONI-1119477] Starch biosynthesis - Oryza nivara [Pathway:R-STU-1119477] Starch biosynthesis - Solanum tuberosum [Pathway:R-LAN-1119477] Starch biosynthesis - Lupinus angustifolius [Pathway:R-CME-1119477] Starch biosynthesis - Cyanidioschyzon merolae [Pathway:R-PVU-1119477] Starch biosynthesis - Phaseolus vulgaris [Pathway:R-CCR-1119477] Starch biosynthesis - Chondrus crispus [Pathway:R-AHA-1119477] Starch biosynthesis - Arabidopsis halleri [Pathway:R-ETE-1119477] Starch biosynthesis - Eragrostis tef [Pathway:R-CCL-1119477] Starch biosynthesis - Citrus clementina [Pathway:R-AOF-1119477] Starch biosynthesis - Asparagus officinalis [Pathway:R-CCD-1119477] Starch biosynthesis - Cynara cardunculus var. scolymus [Pathway:R-TTI-1119477] Starch biosynthesis - Triticum timopheevii subsp. timopheevii [Pathway:R-MTR-1119477] Starch biosynthesis - Medicago truncatula [Pathway:R-SPC-1119477] Starch biosynthesis - Synechocystis sp. PCC 6803 [Pathway:R-PSA-1119477] Starch biosynthesis - Pisum sativum [Pathway:R-AUM-1119477] Starch biosynthesis - Aegilops umbellulata [Pathway:R-CST-1119477] Starch biosynthesis - Camelina sativa [Pathway:R-ORU-1119477] Starch biosynthesis - Oryza rufipogon [Pathway:R-DRO-1119477] Starch biosynthesis - Dioscorea rotundata [Pathway:R-BOL-1119477] Starch biosynthesis - Brassica oleracea [Pathway:R-ECG-1119477] Starch biosynthesis - Echinochloa crus-galli [Pathway:R-SVI-1119477] Starch biosynthesis - Setaria viridis [Pathway:R-CLA-1119477] Starch biosynthesis - Citrullus lanatus [Pathway:R-PAV-1119477] Starch biosynthesis - Prunus avium [Pathway:R-FVE-1119477] Starch biosynthesis - Fragaria vesca [Pathway:R-CSA-1119477] Starch biosynthesis - Cucumis sativus [Pathway:R-LSA-1119477] Starch biosynthesis - Lactuca sativa [Pathway:R-OEU-1119477] Starch biosynthesis - Olea europaea [Pathway:R-SLY-1119477] Starch biosynthesis - Solanum lycopersicum [Pathway:R-TCA-1119477] Starch biosynthesis - Theobroma cacao [Pathway:R-CBA-1119477] Starch biosynthesis - Chara braunii [Pathway:R-SSP-1119477] Starch biosynthesis - Saccharum spontaneum [Pathway:R-OLU-1119477] Starch biosynthesis - Ostreococcus lucimarinus [Pathway:R-ATR-1119477] Starch biosynthesis - Amborella trichopoda [Pathway:R-BNA-1119477] Starch biosynthesis - Brassica napus [Pathway:R-PPA-1119477] Starch biosynthesis - Physcomitrella patens [Pathway:R-QLO-1119477] Starch biosynthesis - Quercus lobata [Pathway:R-AHY-1119477] Starch biosynthesis - Arachis hypogaea [Pathway:R-SMO-1119477] Starch biosynthesis - Selaginella moellendorffii [Pathway:R-DEX-1119477] Starch biosynthesis - Digitaria exilis [Pathway:R-ATA-1119477] Starch biosynthesis - Aegilops tauschii [Pathway:R-OKA-1119477] Starch biosynthesis - Oryza sativa aus subgroup [Pathway:R-PTI-1119477] Starch biosynthesis - Populus trichocarpa [Pathway:R-NAT-1119477] Starch biosynthesis - Nicotiana attenuata [Pathway:R-GRA-1119477] Starch biosynthesis - Gossypium raimondii [Pathway:R-MGU-1119477] Starch biosynthesis - Erythranthe guttata [Pathway:R-GSU-1119477] Starch biosynthesis - Galdieria sulphuraria [Pathway:R-GSO-1119477] Starch biosynthesis - Glycine soja [Pathway:R-ACH-1119477] Starch biosynthesis - Actinidia chinensis [Pathway:R-ATH-1119477] Starch biosynthesis - Arabidopsis thaliana [Pathway:R-VAN-1119477] Starch biosynthesis - Vigna angularis [Pathway:R-OGL-1119477] Starch biosynthesis - Oryza glaberrima [Pathway:R-TTU-1119477] Starch biosynthesis - Triticum turgidum [Pathway:R-PHH-1119477] Starch biosynthesis - Panicum hallii var. hallii ("HAL2") [Pathway:R-HLH-1119477] Starch biosynthesis - Humulus lupulus [Pathway:R-ITR-1119477] Starch biosynthesis - Ipomoea triloba [Pathway:R-AIP-1119477] Starch biosynthesis - Arachis ipaensis [Pathway:R-OGR-1119477] Starch biosynthesis - Oryza meyeriana var. granulata [Pathway:R-VRA-1119477] Starch biosynthesis - Vigna radiata [Pathway:R-VUN-1119477] Starch biosynthesis - Vigna unguiculata [Pathway:R-BDI-1119477] Starch biosynthesis - Brachypodium distachyon [Pathway:R-NNU-1119477] Starch biosynthesis - Nelumbo nucifera [Pathway:R-PED-1119477] Starch biosynthesis - Phyllostachys edulis [Pathway:R-TDI-1119477] Starch biosynthesis - Triticum dicoccoides [Pathway:R-CSK-1119477] Starch biosynthesis - Cannabis sativa subsp. indica [Pathway:R-HAN-1119477] Starch biosynthesis - Helianthus annuus [Pathway:R-VFA-1119477] Starch biosynthesis - Vicia faba var. faba [Pathway:R-BJU-1119477] Starch biosynthesis - Brassica juncea [Pathway:R-CCI-1119477] Starch biosynthesis - Corymbia citriodora [Pathway:R-CAR-1119477] Starch biosynthesis - Cicer arietinum [Pathway:R-PHA-1119477] Starch biosynthesis - Panicum hallii ("FIL2") [Pathway:R-CCA-1119477] Starch biosynthesis - Cajanus cajan [Pathway:R-ADU-1119477] Starch biosynthesis - Arachis duranensis [Pathway:R-MDO-1119477] Starch biosynthesis - Malus domestica [Pathway:R-FCR-1119477] Starch biosynthesis - Ficus carica [Pathway:R-ZMY-1119477] Starch biosynthesis - Zea mays ver5 [Pathway:R-VVN-1119477] Starch biosynthesis - Vitis vinifera [Pathway:R-OES-1119477] Starch biosynthesis - Olea europaea var. sylvestris [Pathway:R-OSI-1119477] Starch biosynthesis - Oryza sativa Indica Group [Pathway:R-ECU-1119477] Starch biosynthesis - Eragrostis curvula [Pathway:R-JCU-1119477] Starch biosynthesis - Jatropha curcas [Pathway:R-ALY-1119477] Starch biosynthesis - Arabidopsis lyrata [Pathway:R-ACO-1119477] Starch biosynthesis - Ananas comosus [Pathway:R-TSP-1119477] Starch biosynthesis - Triticum spelta subsp. spelta [Pathway:R-GMA-1119477] Starch biosynthesis - Glycine max [Pathway:R-PVE-1119477] Starch biosynthesis - Pistacia vera [Pathway:R-ZMA-1119477] Starch biosynthesis - Zea mays [Pathway:R-HVU-1119477] Starch biosynthesis - Hordeum vulgare [Pathway:R-CRU-1119477] Starch biosynthesis - Capsella rubella [Pathway:R-COL-1119477] Starch biosynthesis - Corchorus olitorius [Pathway:R-HLP-1119477] Starch biosynthesis - Humulus lupulus var. lupulus [Pathway:R-OPU-1119477] Starch biosynthesis - Oryza punctata [Pathway:R-TUR-1119477] Starch biosynthesis - Triticum urartu [Pathway:R-OLO-1119477] Starch biosynthesis - Oryza longistaminata [Pathway:R-SCR-1119477] Starch biosynthesis - Secale cereale [Pathway:R-DCA-1119477] Starch biosynthesis - Daucus carota [Pathway:R-QSU-1119477] Starch biosynthesis - Quercus suber [Pathway:R-LST-1119477] Starch biosynthesis - Lathyrus sativus [Pathway:R-OOF-1119477] Starch biosynthesis - Oryza officinalis [Pathway:R-PAB-1119477] Starch biosynthesis - Picea abies [Pathway:R-PSO-1119477] Starch biosynthesis - Papaver somniferum [Pathway:R-FEX-1119477] Starch biosynthesis - Fraxinus excelsior (European ash) [Pathway:R-SIN-1119477] Starch biosynthesis - Sesamum indicum [Pathway:R-OBA-1119477] Starch biosynthesis - Oryza barthii [Pathway:R-SBI-1119477] Starch biosynthesis - Sorghum bicolor [Pathway:R-TAE-1119477] Starch biosynthesis - Triticum aestivum [Pathway:R-SHI-1119477] Starch biosynthesis - Salvia hispanica [Pathway:R-PPE-1119477] Starch biosynthesis - Prunus persica [Pathway:R-OBR-1119477] Starch biosynthesis - Oryza brachyantha [Pathway:R-LPE-1119477] Starch biosynthesis - Leersia perrieri [Pathway:R-CAN-1119477] Starch biosynthesis - Capsicum annuum [Pathway:R-ZJA-1119477] Starch biosynthesis - Zoysia japonica [Pathway:R-CCN-1119477] Starch biosynthesis - Coffea canephora [Pathway:R-OGU-1119477] Starch biosynthesis - Oryza glumaepatula [Pathway:R-CSC-1119477] Starch biosynthesis - Cannabis sativa
releaseDate	2025-03-20
releaseStatus	NEW
reviewed	[InstanceEdit:9918176] Naithani, Sushma, 2024-07-22
revised	[InstanceEdit:2960188] Amarasinghe, V, 2012-12-28 [InstanceEdit:9918207] Beasley-Bennett, Joie, 2024-07-25 [InstanceEdit:9918176] Naithani, Sushma, 2024-07-22
schemaClass	Pathway
species	[Species:186860] Oryza sativa
stId	R-OSA-1119477
summation	[Summation:2960178] Starch serves as the main storage carbohydrate to support va...

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