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Ammonia assimilation cycle

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compartment	[Compartment:1141] plastid stroma [Compartment:70101] cytosol
created	[InstanceEdit:1164949] Wu, Guanming, 2010-12-11
crossReference	[DatabaseIdentifier:1134965] RiceCyc:PWY-3282
dbId	1119443
displayName	Ammonia assimilation cycle
eventOf	[Pathway:R-OSA-5368291] Inorganic nutrients metabolism - Oryza sativa
goBiologicalProcess	[GO_BiologicalProcess:12844] ammonia assimilation cycle
hasDiagram	true
hasEvent	[Reaction:R-OSA-1121516] Formation of L-Gln from L-Glu in cytosol - Oryza sativa [Reaction:R-OSA-1120786] Conversion of L-Gln to L-Glu catalyzed by NADH-GOGAT - Oryza sativa [Reaction:R-OSA-1121661] Conversion of L-Gln to L-Glu catalyzed by Fd-GOGAT - Oryza sativa [Reaction:R-OSA-5603478] Formation of L-Gln from L-Glu in plastid - Oryza sativa
isInDisease	false
isInferred	false
literatureReference	[LiteratureReference:9658719] Enhanced tolerance to salt stress in transgenic rice that overexpresses chloroplast glutamine synthetase [LiteratureReference:9658713] Cellular compartmentation of ammonium assimilation in rice and barley [LiteratureReference:9658721] Biochemical background and compartmentalized functions of cytosolic glutamine synthetase for active ammonium assimilation in rice roots [LiteratureReference:9658724] Severe reduction in growth rate and grain filling of rice mutants lacking OsGS1;1, a cytosolic glutamine synthetase1;1 [LiteratureReference:9658715] Overlapping expression of cytosolic glutamine synthetase and phenylalanine ammonia-lyase in immature leaf blades of rice
modified	[InstanceEdit:11540225] Elser, Justin, 2025-03-27
name	Ammonia assimilation cycle Glutamate synthase cycle pathway99244
orthologousEvent	[Pathway:R-NCO-1119443] Ammonia assimilation cycle - Nymphaea colorata [Pathway:R-DRO-1119443] Ammonia assimilation cycle - Dioscorea rotundata [Pathway:R-EGR-1119443] Ammonia assimilation cycle - Eucalyptus grandis [Pathway:R-CCN-1119443] Ammonia assimilation cycle - Coffea canephora [Pathway:R-CCA-1119443] Ammonia assimilation cycle - Cajanus cajan [Pathway:R-TPR-1119443] Ammonia assimilation cycle - Trifolium pratense [Pathway:R-ADU-1119443] Ammonia assimilation cycle - Arachis duranensis [Pathway:R-PHA-1119443] Ammonia assimilation cycle - Panicum hallii ("FIL2") [Pathway:R-TUR-1119443] Ammonia assimilation cycle - Triticum urartu [Pathway:R-GSO-1119443] Ammonia assimilation cycle - Glycine soja [Pathway:R-CME-1119443] Ammonia assimilation cycle - Cyanidioschyzon merolae [Pathway:R-OGR-1119443] Ammonia assimilation cycle - Oryza meyeriana var. granulata [Pathway:R-SBI-1119443] Ammonia assimilation cycle - Sorghum bicolor [Pathway:R-AHA-1119443] Ammonia assimilation cycle - Arabidopsis halleri [Pathway:R-ETE-1119443] Ammonia assimilation cycle - Eragrostis tef [Pathway:R-TSP-1119443] Ammonia assimilation cycle - Triticum spelta subsp. spelta [Pathway:R-TTI-1119443] Ammonia assimilation cycle - Triticum timopheevii subsp. timopheevii [Pathway:R-NNU-1119443] Ammonia assimilation cycle - Nelumbo nucifera [Pathway:R-VVN-1119443] Ammonia assimilation cycle - Vitis vinifera [Pathway:R-TDI-1119443] Ammonia assimilation cycle - Triticum dicoccoides [Pathway:R-OSI-1119443] Ammonia assimilation cycle - Oryza sativa Indica Group [Pathway:R-GRA-1119443] Ammonia assimilation cycle - Gossypium raimondii [Pathway:R-CQI-1119443] Ammonia assimilation cycle - Chenopodium quinoa [Pathway:R-OPU-1119443] Ammonia assimilation cycle - Oryza punctata [Pathway:R-LST-1119443] Ammonia assimilation cycle - Lathyrus sativus [Pathway:R-OLU-1119443] Ammonia assimilation cycle - Ostreococcus lucimarinus [Pathway:R-HVU-1119443] Ammonia assimilation cycle - Hordeum vulgare [Pathway:R-OES-1119443] Ammonia assimilation cycle - Olea europaea var. sylvestris [Pathway:R-CCP-1119443] Ammonia assimilation cycle - Corchorus capsularis [Pathway:R-CCR-1119443] Ammonia assimilation cycle - Chondrus crispus [Pathway:R-GMA-1119443] Ammonia assimilation cycle - Glycine max [Pathway:R-CSK-1119443] Ammonia assimilation cycle - Cannabis sativa subsp. indica [Pathway:R-PVU-1119443] Ammonia assimilation cycle - Phaseolus vulgaris [Pathway:R-AIP-1119443] Ammonia assimilation cycle - Arachis ipaensis [Pathway:R-OME-1119443] Ammonia assimilation cycle - Oryza meridionalis [Pathway:R-CSC-1119443] Ammonia assimilation cycle - Cannabis sativa [Pathway:R-MDO-1119443] Ammonia assimilation cycle - Malus domestica [Pathway:R-LSA-1119443] Ammonia assimilation cycle - Lactuca sativa [Pathway:R-OEU-1119443] Ammonia assimilation cycle - Olea europaea [Pathway:R-ECG-1119443] Ammonia assimilation cycle - Echinochloa crus-galli [Pathway:R-MTR-1119443] Ammonia assimilation cycle - Medicago truncatula [Pathway:R-CST-1119443] Ammonia assimilation cycle - Camelina sativa [Pathway:R-TCA-1119443] Ammonia assimilation cycle - Theobroma cacao [Pathway:R-DEX-1119443] Ammonia assimilation cycle - Digitaria exilis [Pathway:R-PSO-1119443] Ammonia assimilation cycle - Papaver somniferum [Pathway:R-NAT-1119443] Ammonia assimilation cycle - Nicotiana attenuata [Pathway:R-CLA-1119443] Ammonia assimilation cycle - Citrullus lanatus [Pathway:R-COL-1119443] Ammonia assimilation cycle - Corchorus olitorius [Pathway:R-FCR-1119443] Ammonia assimilation cycle - Ficus carica [Pathway:R-ZMA-1119443] Ammonia assimilation cycle - Zea mays [Pathway:R-SHI-1119443] Ammonia assimilation cycle - Salvia hispanica [Pathway:R-TAE-1119443] Ammonia assimilation cycle - Triticum aestivum [Pathway:R-CBA-1119443] Ammonia assimilation cycle - Chara braunii [Pathway:R-PPE-1119443] Ammonia assimilation cycle - Prunus persica [Pathway:R-ECU-1119443] Ammonia assimilation cycle - Eragrostis curvula [Pathway:R-OOF-1119443] Ammonia assimilation cycle - Oryza officinalis [Pathway:R-ATA-1119443] Ammonia assimilation cycle - Aegilops tauschii [Pathway:R-CCI-1119443] Ammonia assimilation cycle - Corymbia citriodora [Pathway:R-VUN-1119443] Ammonia assimilation cycle - Vigna unguiculata [Pathway:R-QSU-1119443] Ammonia assimilation cycle - Quercus suber [Pathway:R-SMO-1119443] Ammonia assimilation cycle - Selaginella moellendorffii [Pathway:R-ASA-1119443] Ammonia assimilation cycle - Avena sativa [Pathway:R-VAN-1119443] Ammonia assimilation cycle - Vigna angularis [Pathway:R-JRE-1119443] Ammonia assimilation cycle - Juglans regia [Pathway:R-OAU-1119443] Ammonia assimilation cycle - Oryza australiensis [Pathway:R-JCU-1119443] Ammonia assimilation cycle - Jatropha curcas [Pathway:R-ITR-1119443] Ammonia assimilation cycle - Ipomoea triloba [Pathway:R-STU-1119443] Ammonia assimilation cycle - Solanum tuberosum [Pathway:R-CSA-1119443] Ammonia assimilation cycle - Cucumis sativus [Pathway:R-CAN-1119443] Ammonia assimilation cycle - Capsicum annuum [Pathway:R-ACH-1119443] Ammonia assimilation cycle - Actinidia chinensis [Pathway:R-VFA-1119443] Ammonia assimilation cycle - Vicia faba var. faba [Pathway:R-CRU-1119443] Ammonia assimilation cycle - Capsella rubella [Pathway:R-CRE-1119443] Ammonia assimilation cycle - Chlamydomonas reinhardtii [Pathway:R-PDA-1119443] Ammonia assimilation cycle - Phoenix dactylifera [Pathway:R-CSI-1119443] Ammonia assimilation cycle - Citrus sinensis [Pathway:R-CML-1119443] Ammonia assimilation cycle - Cucumis melo [Pathway:R-PTA-1119443] Ammonia assimilation cycle - Pinus taeda [Pathway:R-HLP-1119443] Ammonia assimilation cycle - Humulus lupulus var. lupulus [Pathway:R-CAR-1119443] Ammonia assimilation cycle - Cicer arietinum [Pathway:R-HAN-1119443] Ammonia assimilation cycle - Helianthus annuus [Pathway:R-MAC-1119443] Ammonia assimilation cycle - Musa acuminata [Pathway:R-MPO-1119443] Ammonia assimilation cycle - Marchantia polymorpha [Pathway:R-TTU-1119443] Ammonia assimilation cycle - Triticum turgidum [Pathway:R-OMI-1119443] Ammonia assimilation cycle - Oryza minuta [Pathway:R-BDI-1119443] Ammonia assimilation cycle - Brachypodium distachyon [Pathway:R-VRA-1119443] Ammonia assimilation cycle - Vigna radiata [Pathway:R-CCD-1119443] Ammonia assimilation cycle - Cynara cardunculus var. scolymus [Pathway:R-RCH-1119443] Ammonia assimilation cycle - Rosa chinensis [Pathway:R-LPE-1119443] Ammonia assimilation cycle - Leersia perrieri [Pathway:R-OKA-1119443] Ammonia assimilation cycle - Oryza sativa aus subgroup [Pathway:R-LAN-1119443] Ammonia assimilation cycle - Lupinus angustifolius [Pathway:R-CCL-1119443] Ammonia assimilation cycle - Citrus clementina [Pathway:R-PSA-1119443] Ammonia assimilation cycle - Pisum sativum [Pathway:R-PAB-1119443] Ammonia assimilation cycle - Picea abies [Pathway:R-ZMY-1119443] Ammonia assimilation cycle - Zea mays ver5 [Pathway:R-OBA-1119443] Ammonia assimilation cycle - Oryza barthii [Pathway:R-BJU-1119443] Ammonia assimilation cycle - Brassica juncea [Pathway:R-SVI-1119443] Ammonia assimilation cycle - Setaria viridis [Pathway:R-LPR-1119443] Ammonia assimilation cycle - Lolium perenne [Pathway:R-HLH-1119443] Ammonia assimilation cycle - Humulus lupulus [Pathway:R-BRA-1119443] Ammonia assimilation cycle - Brassica rapa [Pathway:R-AOF-1119443] Ammonia assimilation cycle - Asparagus officinalis [Pathway:R-ALY-1119443] Ammonia assimilation cycle - Arabidopsis lyrata [Pathway:R-PVE-1119443] Ammonia assimilation cycle - Pistacia vera [Pathway:R-FVE-1119443] Ammonia assimilation cycle - Fragaria vesca [Pathway:R-ONI-1119443] Ammonia assimilation cycle - Oryza nivara [Pathway:R-SIT-1119443] Ammonia assimilation cycle - Setaria italica [Pathway:R-PAV-1119443] Ammonia assimilation cycle - Prunus avium [Pathway:R-SLY-1119443] Ammonia assimilation cycle - Solanum lycopersicum [Pathway:R-OLO-1119443] Ammonia assimilation cycle - Oryza longistaminata [Pathway:R-OGL-1119443] Ammonia assimilation cycle - Oryza glaberrima [Pathway:R-SPC-1119443] Ammonia assimilation cycle - Synechocystis sp. PCC 6803 [Pathway:R-ORU-1119443] Ammonia assimilation cycle - Oryza rufipogon [Pathway:R-BOL-1119443] Ammonia assimilation cycle - Brassica oleracea [Pathway:R-ATR-1119443] Ammonia assimilation cycle - Amborella trichopoda [Pathway:R-SCR-1119443] Ammonia assimilation cycle - Secale cereale [Pathway:R-BNA-1119443] Ammonia assimilation cycle - Brassica napus [Pathway:R-ACO-1119443] Ammonia assimilation cycle - Ananas comosus [Pathway:R-ZJA-1119443] Ammonia assimilation cycle - Zoysia japonica [Pathway:R-GSU-1119443] Ammonia assimilation cycle - Galdieria sulphuraria [Pathway:R-SSP-1119443] Ammonia assimilation cycle - Saccharum spontaneum [Pathway:R-SIN-1119443] Ammonia assimilation cycle - Sesamum indicum [Pathway:R-BVU-1119443] Ammonia assimilation cycle - Beta vulgaris [Pathway:R-AUM-1119443] Ammonia assimilation cycle - Aegilops umbellulata [Pathway:R-DCA-1119443] Ammonia assimilation cycle - Daucus carota [Pathway:R-ATH-1119443] Ammonia assimilation cycle - Arabidopsis thaliana [Pathway:R-PHH-1119443] Ammonia assimilation cycle - Panicum hallii var. hallii ("HAL2") [Pathway:R-OGU-1119443] Ammonia assimilation cycle - Oryza glumaepatula [Pathway:R-PPA-1119443] Ammonia assimilation cycle - Physcomitrella patens [Pathway:R-PED-1119443] Ammonia assimilation cycle - Phyllostachys edulis [Pathway:R-AHY-1119443] Ammonia assimilation cycle - Arachis hypogaea [Pathway:R-FEX-1119443] Ammonia assimilation cycle - Fraxinus excelsior (European ash) [Pathway:R-MGU-1119443] Ammonia assimilation cycle - Erythranthe guttata [Pathway:R-QLO-1119443] Ammonia assimilation cycle - Quercus lobata [Pathway:R-PTI-1119443] Ammonia assimilation cycle - Populus trichocarpa [Pathway:R-OBR-1119443] Ammonia assimilation cycle - Oryza brachyantha [Pathway:R-MES-1119443] Ammonia assimilation cycle - Manihot esculenta
revised	[InstanceEdit:9646192] Gupta, Parul, 2019-05-17
schemaClass	Pathway
species	[Species:186860] Oryza sativa
stId	R-OSA-1119443
summation	[Summation:1119236] Data source: RiceCyc

Referrals

(hasEvent)

[Pathway:R-OSA-5368291] Inorganic nutrients metabolism - Oryza sativa