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Chlorophyll cycle

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compartment	[Compartment:70101] cytosol
created	[InstanceEdit:1164949] Wu, Guanming, 2010-12-11
crossReference	[DatabaseIdentifier:1140658] RiceCyc:PWY-5068
dbId	1119320
displayName	Chlorophyll cycle
edited	[InstanceEdit:4719469] Amoss, Kindra, 2013-05-17 [InstanceEdit:4719473] Dharmawardhana, DP, 2013-07-31
eventOf	[Pathway:R-OSA-2867929] Cofactor biosyntheses - Oryza sativa
goBiologicalProcess	[GO_BiologicalProcess:261885] chlorophyll cycle
hasDiagram	true
hasEvent	[Reaction:R-OSA-1120710] chlorophyll b+H2O+NADP+->7-hydroxy-chlorophyll a+O2+NADPH - Oryza sativa [Reaction:R-OSA-1121325] 7-hydroxy-chlorophyll a+H2O+NADP+->chlorophyll a+O2+NADPH - Oryza sativa [Reaction:R-OSA-4719468] chlorophyll a+diphosphate->chlorophyllide a+phytyl-PP - Oryza sativa [Reaction:R-OSA-1119852] chlorophyllide a+O2+NADPH->7-hydroxy-chlorophyllide a+H2O+NADP+ - Oryza sativa [Reaction:R-OSA-1121175] 7-hydroxy-chlorophyllide a+O2+NADPH->chlorophyllide b+H2O+NADP+ - Oryza sativa [Reaction:R-OSA-1120191] chlorophyllide b+phytyl-PP->chlorophyll b+diphosphate - Oryza sativa
isInDisease	false
isInferred	false
literatureReference	[LiteratureReference:1154542] Conversion of Chlorophyll b to Chlorophyll a and the Assembly of Chlorophyll with Apoproteins by Isolated Chloroplasts [LiteratureReference:1154534] Biosynthesis of chlorophyll b and the chlorophyll cycle [LiteratureReference:1154546] Conversion of chlorophyll b to chlorophyll a via 7-hydroxymethyl chlorophyll
modified	[InstanceEdit:11540225] Elser, Justin, 2025-03-27
name	Chlorophyll cycle chlorophyll b biosynthesis pathway101383
orthologousEvent	[Pathway:R-CCA-1119320] Chlorophyll cycle - Cajanus cajan [Pathway:R-LAN-1119320] Chlorophyll cycle - Lupinus angustifolius [Pathway:R-MPO-1119320] Chlorophyll cycle - Marchantia polymorpha [Pathway:R-MAC-1119320] Chlorophyll cycle - Musa acuminata [Pathway:R-CRE-1119320] Chlorophyll cycle - Chlamydomonas reinhardtii [Pathway:R-SIT-1119320] Chlorophyll cycle - Setaria italica [Pathway:R-OMI-1119320] Chlorophyll cycle - Oryza minuta [Pathway:R-CCD-1119320] Chlorophyll cycle - Cynara cardunculus var. scolymus [Pathway:R-BRA-1119320] Chlorophyll cycle - Brassica rapa [Pathway:R-ZMA-1119320] Chlorophyll cycle - Zea mays [Pathway:R-OSI-1119320] Chlorophyll cycle - Oryza sativa Indica Group [Pathway:R-CML-1119320] Chlorophyll cycle - Cucumis melo [Pathway:R-JRE-1119320] Chlorophyll cycle - Juglans regia [Pathway:R-MGU-1119320] Chlorophyll cycle - Erythranthe guttata [Pathway:R-STU-1119320] Chlorophyll cycle - Solanum tuberosum [Pathway:R-AIP-1119320] Chlorophyll cycle - Arachis ipaensis [Pathway:R-ITR-1119320] Chlorophyll cycle - Ipomoea triloba [Pathway:R-CSK-1119320] Chlorophyll cycle - Cannabis sativa subsp. indica [Pathway:R-CCP-1119320] Chlorophyll cycle - Corchorus capsularis [Pathway:R-ONI-1119320] Chlorophyll cycle - Oryza nivara [Pathway:R-GMA-1119320] Chlorophyll cycle - Glycine max [Pathway:R-MDO-1119320] Chlorophyll cycle - Malus domestica [Pathway:R-TDI-1119320] Chlorophyll cycle - Triticum dicoccoides [Pathway:R-VAN-1119320] Chlorophyll cycle - Vigna angularis [Pathway:R-HAN-1119320] Chlorophyll cycle - Helianthus annuus [Pathway:R-SCR-1119320] Chlorophyll cycle - Secale cereale [Pathway:R-LST-1119320] Chlorophyll cycle - Lathyrus sativus [Pathway:R-CCN-1119320] Chlorophyll cycle - Coffea canephora [Pathway:R-TPR-1119320] Chlorophyll cycle - Trifolium pratense [Pathway:R-PHH-1119320] Chlorophyll cycle - Panicum hallii var. hallii ("HAL2") [Pathway:R-OKA-1119320] Chlorophyll cycle - Oryza sativa aus subgroup [Pathway:R-ZJA-1119320] Chlorophyll cycle - Zoysia japonica [Pathway:R-LPE-1119320] Chlorophyll cycle - Leersia perrieri [Pathway:R-CLA-1119320] Chlorophyll cycle - Citrullus lanatus [Pathway:R-GRA-1119320] Chlorophyll cycle - Gossypium raimondii [Pathway:R-PAB-1119320] Chlorophyll cycle - Picea abies [Pathway:R-TAE-1119320] Chlorophyll cycle - Triticum aestivum [Pathway:R-SLY-1119320] Chlorophyll cycle - Solanum lycopersicum [Pathway:R-NAT-1119320] Chlorophyll cycle - Nicotiana attenuata [Pathway:R-FEX-1119320] Chlorophyll cycle - Fraxinus excelsior (European ash) [Pathway:R-PTI-1119320] Chlorophyll cycle - Populus trichocarpa [Pathway:R-AUM-1119320] Chlorophyll cycle - Aegilops umbellulata [Pathway:R-OBA-1119320] Chlorophyll cycle - Oryza barthii [Pathway:R-BVU-1119320] Chlorophyll cycle - Beta vulgaris [Pathway:R-CST-1119320] Chlorophyll cycle - Camelina sativa [Pathway:R-OGL-1119320] Chlorophyll cycle - Oryza glaberrima [Pathway:R-CCL-1119320] Chlorophyll cycle - Citrus clementina [Pathway:R-QSU-1119320] Chlorophyll cycle - Quercus suber [Pathway:R-BOL-1119320] Chlorophyll cycle - Brassica oleracea [Pathway:R-OLO-1119320] Chlorophyll cycle - Oryza longistaminata [Pathway:R-DEX-1119320] Chlorophyll cycle - Digitaria exilis [Pathway:R-CSA-1119320] Chlorophyll cycle - Cucumis sativus [Pathway:R-VVN-1119320] Chlorophyll cycle - Vitis vinifera [Pathway:R-ORU-1119320] Chlorophyll cycle - Oryza rufipogon [Pathway:R-ECG-1119320] Chlorophyll cycle - Echinochloa crus-galli [Pathway:R-VUN-1119320] Chlorophyll cycle - Vigna unguiculata [Pathway:R-QLO-1119320] Chlorophyll cycle - Quercus lobata [Pathway:R-CSC-1119320] Chlorophyll cycle - Cannabis sativa [Pathway:R-MES-1119320] Chlorophyll cycle - Manihot esculenta [Pathway:R-PSA-1119320] Chlorophyll cycle - Pisum sativum [Pathway:R-CBA-1119320] Chlorophyll cycle - Chara braunii [Pathway:R-OEU-1119320] Chlorophyll cycle - Olea europaea [Pathway:R-ACO-1119320] Chlorophyll cycle - Ananas comosus [Pathway:R-OOF-1119320] Chlorophyll cycle - Oryza officinalis [Pathway:R-FCR-1119320] Chlorophyll cycle - Ficus carica [Pathway:R-JCU-1119320] Chlorophyll cycle - Jatropha curcas [Pathway:R-VRA-1119320] Chlorophyll cycle - Vigna radiata [Pathway:R-CCI-1119320] Chlorophyll cycle - Corymbia citriodora [Pathway:R-OBR-1119320] Chlorophyll cycle - Oryza brachyantha [Pathway:R-ADU-1119320] Chlorophyll cycle - Arachis duranensis [Pathway:R-PHA-1119320] Chlorophyll cycle - Panicum hallii ("FIL2") [Pathway:R-CQI-1119320] Chlorophyll cycle - Chenopodium quinoa [Pathway:R-PVU-1119320] Chlorophyll cycle - Phaseolus vulgaris [Pathway:R-OLU-1119320] Chlorophyll cycle - Ostreococcus lucimarinus [Pathway:R-GSO-1119320] Chlorophyll cycle - Glycine soja [Pathway:R-PED-1119320] Chlorophyll cycle - Phyllostachys edulis [Pathway:R-LPR-1119320] Chlorophyll cycle - Lolium perenne [Pathway:R-PDA-1119320] Chlorophyll cycle - Phoenix dactylifera [Pathway:R-CRU-1119320] Chlorophyll cycle - Capsella rubella [Pathway:R-CSI-1119320] Chlorophyll cycle - Citrus sinensis [Pathway:R-VFA-1119320] Chlorophyll cycle - Vicia faba var. faba [Pathway:R-TSP-1119320] Chlorophyll cycle - Triticum spelta subsp. spelta [Pathway:R-OES-1119320] Chlorophyll cycle - Olea europaea var. sylvestris [Pathway:R-PVE-1119320] Chlorophyll cycle - Pistacia vera [Pathway:R-ASA-1119320] Chlorophyll cycle - Avena sativa [Pathway:R-CME-1119320] Chlorophyll cycle - Cyanidioschyzon merolae [Pathway:R-ATH-1119320] Chlorophyll cycle - Arabidopsis thaliana [Pathway:R-LSA-1119320] Chlorophyll cycle - Lactuca sativa [Pathway:R-OGU-1119320] Chlorophyll cycle - Oryza glumaepatula [Pathway:R-SBI-1119320] Chlorophyll cycle - Sorghum bicolor [Pathway:R-TCA-1119320] Chlorophyll cycle - Theobroma cacao [Pathway:R-PPE-1119320] Chlorophyll cycle - Prunus persica [Pathway:R-TTU-1119320] Chlorophyll cycle - Triticum turgidum [Pathway:R-SHI-1119320] Chlorophyll cycle - Salvia hispanica [Pathway:R-SIN-1119320] Chlorophyll cycle - Sesamum indicum [Pathway:R-RCH-1119320] Chlorophyll cycle - Rosa chinensis [Pathway:R-DCA-1119320] Chlorophyll cycle - Daucus carota [Pathway:R-SMO-1119320] Chlorophyll cycle - Selaginella moellendorffii [Pathway:R-MTR-1119320] Chlorophyll cycle - Medicago truncatula [Pathway:R-HVU-1119320] Chlorophyll cycle - Hordeum vulgare [Pathway:R-ACH-1119320] Chlorophyll cycle - Actinidia chinensis [Pathway:R-SSP-1119320] Chlorophyll cycle - Saccharum spontaneum [Pathway:R-TUR-1119320] Chlorophyll cycle - Triticum urartu [Pathway:R-OME-1119320] Chlorophyll cycle - Oryza meridionalis [Pathway:R-ATA-1119320] Chlorophyll cycle - Aegilops tauschii [Pathway:R-FVE-1119320] Chlorophyll cycle - Fragaria vesca [Pathway:R-ZMY-1119320] Chlorophyll cycle - Zea mays ver5 [Pathway:R-BNA-1119320] Chlorophyll cycle - Brassica napus [Pathway:R-PPA-1119320] Chlorophyll cycle - Physcomitrella patens [Pathway:R-SPC-1119320] Chlorophyll cycle - Synechocystis sp. PCC 6803 [Pathway:R-NNU-1119320] Chlorophyll cycle - Nelumbo nucifera [Pathway:R-TTI-1119320] Chlorophyll cycle - Triticum timopheevii subsp. timopheevii [Pathway:R-AOF-1119320] Chlorophyll cycle - Asparagus officinalis [Pathway:R-CCR-1119320] Chlorophyll cycle - Chondrus crispus [Pathway:R-ATR-1119320] Chlorophyll cycle - Amborella trichopoda [Pathway:R-CAN-1119320] Chlorophyll cycle - Capsicum annuum [Pathway:R-AHY-1119320] Chlorophyll cycle - Arachis hypogaea [Pathway:R-ETE-1119320] Chlorophyll cycle - Eragrostis tef [Pathway:R-CAR-1119320] Chlorophyll cycle - Cicer arietinum [Pathway:R-ALY-1119320] Chlorophyll cycle - Arabidopsis lyrata [Pathway:R-GSU-1119320] Chlorophyll cycle - Galdieria sulphuraria [Pathway:R-OAU-1119320] Chlorophyll cycle - Oryza australiensis [Pathway:R-COL-1119320] Chlorophyll cycle - Corchorus olitorius [Pathway:R-AHA-1119320] Chlorophyll cycle - Arabidopsis halleri [Pathway:R-ECU-1119320] Chlorophyll cycle - Eragrostis curvula [Pathway:R-SVI-1119320] Chlorophyll cycle - Setaria viridis [Pathway:R-BDI-1119320] Chlorophyll cycle - Brachypodium distachyon [Pathway:R-EGR-1119320] Chlorophyll cycle - Eucalyptus grandis [Pathway:R-NCO-1119320] Chlorophyll cycle - Nymphaea colorata [Pathway:R-OGR-1119320] Chlorophyll cycle - Oryza meyeriana var. granulata [Pathway:R-OPU-1119320] Chlorophyll cycle - Oryza punctata [Pathway:R-DRO-1119320] Chlorophyll cycle - Dioscorea rotundata [Pathway:R-PSO-1119320] Chlorophyll cycle - Papaver somniferum
schemaClass	Pathway
species	[Species:186860] Oryza sativa
stId	R-OSA-1119320
summation	[Summation:4719472] chlorophyll cycle [Summation:2850146] Developed by Gramene.org

Referrals

(hasEvent)

[Pathway:R-OSA-2867929] Cofactor biosyntheses - Oryza sativa