Plant Reactome Pathway Database

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 Plant Reactome Pathway Database

  • About
    • What is Plant Reactome ?
    • Team
    • Scientific Advisory Board
    • License Agreement
    • Disclaimer
    • Staff
  • Content
    • Data Schema
    • Release Summary
  • Docs
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      • Pathways Overview
      • Pathway Diagrams
    • Data Model
    • Computational Inference
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Schema > Pathway > Entries

Crown root development

Go to Details
compartment
  • [Compartment:7660] nucleoplasm
created [InstanceEdit:10318857] Elser, Justin, 2025-03-25
dbId 10328501
displayName Crown root development
eventOf
  • [Pathway:R-FVE-9640032] Root structure development - Fragaria vesca
evidenceType [EvidenceType:9939645] inferred by electronic annotation
hasDiagram true
hasEvent
  • [BlackBoxEvent:R-FVE-9675378] Expression of IAA6 - Fragaria vesca
  • [BlackBoxEvent:R-FVE-9675456] Expression of FSM - Fragaria vesca
inferredFrom
  • [Pathway:R-OSA-9030680] Crown root development - Oryza sativa
isInDisease false
isInferred true
name
  • Crown root development
releaseDate 2025-02-15
schemaClass Pathway
species
  • [Species:9029959] Fragaria vesca
stId R-FVE-9030680
summation
  • [Summation:9939644] This event has been computationally inferred from an event that has been demonstrated in another species.

    The inference is based on the homology mappings from Ensembl Compara. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 1% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.

    More details and caveats of the event inference in Reactome.

Referrals

(hasEvent)
  • [Pathway:R-FVE-9640032] Root structure development - Fragaria vesca
(inferredTo)
  • [Pathway:R-OSA-9030680] Crown root development - Oryza sativa
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