Toggle navigation
About
What is Plant Reactome ?
Team
Scientific Advisory Board
License Agreement
Disclaimer
Staff
Content
Data Schema
Release Summary
Docs
User Guide
Developer's Zone
Graph Database
Content Service
Pathways Overview
Pathway Diagrams
Data Model
Computational Inference
Linking to Us
Citing us
Tools
Pathway Browser
Analyze Data
Species Comparison
Content Service
Community
Outreach
Events
Training
Publications
Partners
Download
About
What is Plant Reactome ?
Team
Scientific Advisory Board
License Agreement
Disclaimer
Staff
Content
Data Schema
Release Summary
Docs
User Guide
Developer's Zone
Graph Database
Content Service
Pathways Overview
Pathway Diagrams
Data Model
Computational Inference
Linking to Us
Citing us
Tools
Pathway Browser
Analyze Data
Species Comparison
Content Service
Community
Outreach
Events
Training
Publications
Partners
Download
Search ...
Go!
TOP1
Stable Identifier
R-OSA-9675426
Type
Protein [EntityWithAccessionedSequence]
Species
Oryza sativa
Synonyms
DNA topoisomerase I
Locations in the PathwayBrowser
Expand all
Growth and developmental processes (Oryza sativa)
Vegetative structure development (Oryza sativa)
Root structure development (Oryza sativa)
Primary root development (Oryza sativa)
Expression of TOP1 (Oryza sativa)
TOP1 [nucleoplasm] (Oryza sativa)
Literature References
PubMed ID
Title
Journal
Year
28412545
DNA Topoisomerase 1 Prevents R-loop Accumulation to Modulate Auxin-Regulated Root Development in Rice
Mol Plant
2017
External Reference Information
External Reference
UniProt:Q84ZL5 Os08g0154600
Gene Names
Os08g0154600, OJ1066_B03.125, OsJ_26075, OSNPB_080154600
Participant Of
output
Expression of TOP1
Inferred To
PGSC0003DMG400001083 [nucleoplasm] (Solanum tuberosum)
A4A49_13004 [nucleoplasm] (Nicotiana attenuata)
gene2022 [nucleoplasm] (Medicago truncatula)
Sspon.06G0011170-1A [nucleoplasm] (Saccharum spontaneum)
Sspon.06G0011170-1P [nucleoplasm] (Saccharum spontaneum)
Homologues of TOP1 [nucleoplasm] (Actinidia chinensis)
Homologues of TOP1 [nucleoplasm] (Aegilops tauschii)
Homologues of TOP1 [nucleoplasm] (Aegilops umbellulata)
Homologues of TOP1 [nucleoplasm] (Arabidopsis halleri)
Homologues of TOP1 [nucleoplasm] (Arabidopsis lyrata)
Homologues of TOP1 [nucleoplasm] (Arabidopsis thaliana)
Homologues of TOP1 [nucleoplasm] (Arachis hypogaea)
Homologues of TOP1 [nucleoplasm] (Asparagus officinalis)
Homologues of TOP1 [nucleoplasm] (Avena sativa)
Homologues of TOP1 [nucleoplasm] (Brachypodium distachyon)
Homologues of TOP1 [nucleoplasm] (Brassica juncea)
Homologues of TOP1 [nucleoplasm] (Brassica napus)
Homologues of TOP1 [nucleoplasm] (Brassica oleracea)
Homologues of TOP1 [nucleoplasm] (Brassica rapa)
Homologues of TOP1 [nucleoplasm] (Cajanus cajan)
Homologues of TOP1 [nucleoplasm] (Camelina sativa)
Homologues of TOP1 [nucleoplasm] (Corchorus capsularis)
Homologues of TOP1 [nucleoplasm] (Cynara cardunculus var. scolymus)
Homologues of TOP1 [nucleoplasm] (Daucus carota)
Homologues of TOP1 [nucleoplasm] (Digitaria exilis)
Homologues of TOP1 [nucleoplasm] (Dioscorea rotundata)
Homologues of TOP1 [nucleoplasm] (Echinochloa crus-galli)
Homologues of TOP1 [nucleoplasm] (Eragrostis tef)
Homologues of TOP1 [nucleoplasm] (Ficus carica)
Homologues of TOP1 [nucleoplasm] (Fraxinus excelsior (European ash))
Homologues of TOP1 [nucleoplasm] (Glycine max)
Homologues of TOP1 [nucleoplasm] (Glycine soja)
Homologues of TOP1 [nucleoplasm] (Gossypium raimondii)
Homologues of TOP1 [nucleoplasm] (Helianthus annuus)
Homologues of TOP1 [nucleoplasm] (Hordeum vulgare)
Homologues of TOP1 [nucleoplasm] (Juglans regia)
Homologues of TOP1 [nucleoplasm] (Lactuca sativa)
Homologues of TOP1 [nucleoplasm] (Lathyrus sativus)
Homologues of TOP1 [nucleoplasm] (Lupinus angustifolius)
Homologues of TOP1 [nucleoplasm] (Malus domestica)
Homologues of TOP1 [nucleoplasm] (Manihot esculenta)
Homologues of TOP1 [nucleoplasm] (Medicago truncatula)
Homologues of TOP1 [nucleoplasm] (Musa acuminata)
Homologues of TOP1 [nucleoplasm] (Olea europaea)
Homologues of TOP1 [nucleoplasm] (Olea europaea var. sylvestris)
Homologues of TOP1 [nucleoplasm] (Papaver somniferum)
Homologues of TOP1 [nucleoplasm] (Physcomitrella patens)
Homologues of TOP1 [nucleoplasm] (Pisum sativum)
Homologues of TOP1 [nucleoplasm] (Populus trichocarpa)
Homologues of TOP1 [nucleoplasm] (Prunus avium)
Homologues of TOP1 [nucleoplasm] (Prunus persica)
Homologues of TOP1 [nucleoplasm] (Rosa chinensis)
Homologues of TOP1 [nucleoplasm] (Saccharum spontaneum)
Homologues of TOP1 [nucleoplasm] (Secale cereale)
Homologues of TOP1 [nucleoplasm] (Trifolium pratense)
Homologues of TOP1 [nucleoplasm] (Triticum aestivum)
Homologues of TOP1 [nucleoplasm] (Triticum dicoccoides)
Homologues of TOP1 [nucleoplasm] (Triticum spelta subsp. spelta)
Homologues of TOP1 [nucleoplasm] (Triticum timopheevii subsp. timopheevii)
Homologues of TOP1 [nucleoplasm] (Triticum turgidum)
Homologues of TOP1 [nucleoplasm] (Vicia faba var. faba)
Homologues of TOP1 [nucleoplasm] (Vitis vinifera)
OMERI08G03230 [nucleoplasm] (Oryza meridionalis)
BjuA10g10980S [nucleoplasm] (Brassica juncea)
TRIDC7AG042170 [nucleoplasm] (Triticum dicoccoides)
AVESA.00001b.r3.7Ag0002382 [nucleoplasm] (Avena sativa)
EUGRSUZ_C00402 [nucleoplasm] (Eucalyptus grandis)
SEVIR_6G056600v2 [nucleoplasm] (Setaria viridis)
Csa02g057820 [nucleoplasm] (Camelina sativa)
TraesTSP2A01G531600 [nucleoplasm] (Triticum spelta subsp. spelta)
A02p015670.1_BraROA [nucleoplasm] (Brassica rapa)
C.cajan_21105 [nucleoplasm] (Cajanus cajan)
TRITD2Bv1G233400 [nucleoplasm] (Triticum turgidum)
Csa_3G063680 [nucleoplasm] (Cucumis sativus)
DRNTG_33220 [nucleoplasm] (Dioscorea rotundata)
Tritim_EIv0.3_0295070 [nucleoplasm] (Triticum timopheevii subsp. timopheevii)
Tritim_EIv0.3_0429510 [nucleoplasm] (Triticum timopheevii subsp. timopheevii)
gene-LSAT_4X59561 [nucleoplasm] (Lactuca sativa)
GSCOC_T00038819001 [nucleoplasm] (Coffea canephora)
TanjilG_15759 [nucleoplasm] (Lupinus angustifolius)
TanjilG_16372 [nucleoplasm] (Lupinus angustifolius)
Ccrd_001056 [nucleoplasm] (Cynara cardunculus var. scolymus)
CEY00_Acc21601 [nucleoplasm] (Actinidia chinensis)
Vfaba.Hedin2.R1.3g011880 [nucleoplasm] (Vicia faba var. faba)
TRIDC7BG033300 [nucleoplasm] (Triticum dicoccoides)
GQ55_6G037400 [nucleoplasm] (Panicum hallii ("FIL2"))
GQ55_6G037400 [nucleoplasm] (Panicum hallii var. hallii ("HAL2"))
TraesTSP2D01G543000 [nucleoplasm] (Triticum spelta subsp. spelta)
OSTLU_17621 [nucleoplasm] (Ostreococcus lucimarinus)
TRITD0Uv1G060560 [nucleoplasm] (Triticum turgidum)
GLYMA_09G223300 [nucleoplasm] (Glycine max)
Psat3g192280 [nucleoplasm] (Pisum sativum)
TraesTSP7A01G327300 [nucleoplasm] (Triticum spelta subsp. spelta)
Csa11g017510 [nucleoplasm] (Camelina sativa)
SECCE7Rv1G0490430 [nucleoplasm] (Secale cereale)
TraesCS2B02G523400 [nucleoplasm] (Triticum aestivum)
Tritim_EIv0.3_1437690 [nucleoplasm] (Triticum timopheevii subsp. timopheevii)
Manes.03G135240.v8.1 [nucleoplasm] (Manihot esculenta)
OB08G13470 [nucleoplasm] (Oryza brachyantha)
Dexi6A01G0004270 [nucleoplasm] (Digitaria exilis)
Pp3c13_14620 [nucleoplasm] (Physcomitrella patens)
A10p018330.1_BraROA [nucleoplasm] (Brassica rapa)
EVM0015676 [nucleoplasm] (Pistacia vera)
AeUmb.TA1851.r1.2UG0035250 [nucleoplasm] (Aegilops umbellulata)
SECCE2Rv1G0128460 [nucleoplasm] (Secale cereale)
GSBRNA2T00009684001 [nucleoplasm] (Brassica napus)
ORGLA08G0026500 [nucleoplasm] (Oryza glaberrima)
PHAVU_011G016600g [nucleoplasm] (Phaseolus vulgaris)
Vitvi12g00353 [nucleoplasm] (Vitis vinifera)
FCD_00025217 [nucleoplasm] (Ficus carica)
C5167_019016 [nucleoplasm] (Papaver somniferum)
AT5G55310 [nucleoplasm] (Arabidopsis thaliana)
FRAEX38873_v2_000377860 [nucleoplasm] (Fraxinus excelsior (European ash))
CCACVL1_14941 [nucleoplasm] (Corchorus capsularis)
AET2Gv21093800 [nucleoplasm] (Aegilops tauschii)
C5167_021992 [nucleoplasm] (Papaver somniferum)
CEY00_Acc26310 [nucleoplasm] (Actinidia chinensis)
LPERR08G03300 [nucleoplasm] (Leersia perrieri)
MD16G0157700 [nucleoplasm] (Malus domestica)
Pav_sc0000500.1_g160.1.mk [nucleoplasm] (Prunus avium)
CICLE_v10007398mg [nucleoplasm] (Citrus clementina)
TRIDC2BG075520 [nucleoplasm] (Triticum dicoccoides)
MELO3C014153.2 [nucleoplasm] (Cucumis melo)
TraesCS2A02G497300 [nucleoplasm] (Triticum aestivum)
OGLUM08G03280 [nucleoplasm] (Oryza glumaepatula)
AET2Gv21090800 [nucleoplasm] (Aegilops tauschii)
Ma01_g12750 [nucleoplasm] (Musa acuminata)
Tp57577_TGAC_v2_gene9831 [nucleoplasm] (Trifolium pratense)
SIN_1024819 [nucleoplasm] (Sesamum indicum)
Tp57577_TGAC_v2_gene22485 [nucleoplasm] (Trifolium pratense)
GSBRNA2T00157382001 [nucleoplasm] (Brassica napus)
g09293 [nucleoplasm] (Arabidopsis halleri)
TraesCS7B02G202300 [nucleoplasm] (Triticum aestivum)
DCAR_025937 [nucleoplasm] (Daucus carota)
SETIT_013227mg [nucleoplasm] (Setaria italica)
CEY00_Acc33260 [nucleoplasm] (Actinidia chinensis)
itb09g08000 [nucleoplasm] (Ipomoea triloba)
Mp6g05370 [nucleoplasm] (Marchantia polymorpha)
Zm00001d049558 [nucleoplasm] (Zea mays)
OE9A086292 [nucleoplasm] (Olea europaea)
OE9A086292 [nucleoplasm] (Olea europaea var. sylvestris)
OE9A005782 [nucleoplasm] (Olea europaea)
OE9A005782 [nucleoplasm] (Olea europaea var. sylvestris)
Tritim_EIv0.3_0429220 [nucleoplasm] (Triticum timopheevii subsp. timopheevii)
scaffold_802074.1 [nucleoplasm] (Arabidopsis lyrata)
HORVU.MOREX.r3.7HG0700250 [nucleoplasm] (Hordeum vulgare)
OBART08G03260 [nucleoplasm] (Oryza barthii)
Pp3c3_12300 [nucleoplasm] (Physcomitrella patens)
ONIVA08G03170 [nucleoplasm] (Oryza nivara)
gene-CFP56_17073 [nucleoplasm] (Quercus suber)
TRITD7Bv1G114630 [nucleoplasm] (Triticum turgidum)
TanjilG_17462 [nucleoplasm] (Lupinus angustifolius)
Bo2g040090 [nucleoplasm] (Brassica oleracea)
PRUPE_8G003200 [nucleoplasm] (Prunus persica)
Vradi02g01260 [nucleoplasm] (Vigna radiata)
C.cajan_30335 [nucleoplasm] (Cajanus cajan)
gene22255 [nucleoplasm] (Medicago truncatula)
CHC_T00008579001 [nucleoplasm] (Chondrus crispus)
Jr09_15830 [nucleoplasm] (Juglans regia)
Ccrd_020645 [nucleoplasm] (Cynara cardunculus var. scolymus)
Sspon.06G0011170-2P [nucleoplasm] (Saccharum spontaneum)
Manes.03G135300.v8.1 [nucleoplasm] (Manihot esculenta)
Tritim_EIv0.3_1575670 [nucleoplasm] (Triticum timopheevii subsp. timopheevii)
TuG1812G0700003274.01 [nucleoplasm] (Triticum urartu)
fgenesh1_pm.C_scaffold_7001241 [nucleoplasm] (Arabidopsis lyrata)
TraesTSP2A01G534000 [nucleoplasm] (Triticum spelta subsp. spelta)
Vigun11g208800.v1.2 [nucleoplasm] (Vigna unguiculata)
g09294 [nucleoplasm] (Arabidopsis halleri)
EJB05_09218 [nucleoplasm] (Eragrostis curvula)
ORUFI08G03620 [nucleoplasm] (Oryza rufipogon)
BjuB05g33530S [nucleoplasm] (Brassica juncea)
RchiOBHm_Chr6g0301891 [nucleoplasm] (Rosa chinensis)
KN538682.1_FG266 [nucleoplasm] (Oryza longistaminata)
BRADI_5g24917v3 [nucleoplasm] (Brachypodium distachyon)
TraesTSP7B01G216400 [nucleoplasm] (Triticum spelta subsp. spelta)
TRIDC2BG075740 [nucleoplasm] (Triticum dicoccoides)
BjuB05g53770S [nucleoplasm] (Brassica juncea)
OPUNC08G03050 [nucleoplasm] (Oryza punctata)
TraesCS7A02G302200 [nucleoplasm] (Triticum aestivum)
GSBRNA2T00122729001 [nucleoplasm] (Brassica napus)
Csa11g088530 [nucleoplasm] (Camelina sativa)
KYUSg_chr7.22492 [nucleoplasm] (Lolium perenne)
Dexi6B01G0003980 [nucleoplasm] (Digitaria exilis)
arahy.Tifrunner.gnm2.ann2.Ah13g137600 [nucleoplasm] (Arachis hypogaea)
AeUmb.TA1851.r1.2UG0035040 [nucleoplasm] (Aegilops umbellulata)
BjuB02g28240S [nucleoplasm] (Brassica juncea)
T459_19906 [nucleoplasm] (Capsicum annuum)
LOC114425005 [nucleoplasm] (Glycine soja)
AVESA.00001b.r3.7Dg0001376 [nucleoplasm] (Avena sativa)
gene-BT93_L0298 [nucleoplasm] (Corymbia citriodora)
C5167_021994 [nucleoplasm] (Papaver somniferum)
GLYMA_12G013600 [nucleoplasm] (Glycine max)
HanXRQr2_Chr16g0754031 [nucleoplasm] (Helianthus annuus)
Aradu.W56IJ [nucleoplasm] (Arachis duranensis)
Jr02_25130 [nucleoplasm] (Juglans regia)
BGIOSGA028006 [nucleoplasm] (Oryza sativa Indica Group)
TanjilG_11859 [nucleoplasm] (Lupinus angustifolius)
LR48_Vigan08g202700 [nucleoplasm] (Vigna angularis)
C5167_022012 [nucleoplasm] (Papaver somniferum)
A4U43_C01F2540 [nucleoplasm] (Asparagus officinalis)
BjuA01g28750S [nucleoplasm] (Brassica juncea)
Ma04_g26020 [nucleoplasm] (Musa acuminata)
scaffold177.29 [nucleoplasm] (Echinochloa crus-galli)
fgenesh2_kg.8__1431__AT5G55300.1 [nucleoplasm] (Arabidopsis lyrata)
C.cajan_36920 [nucleoplasm] (Cajanus cajan)
Vitvi19g01624 [nucleoplasm] (Vitis vinifera)
Potri.011G092700.v4.1 [nucleoplasm] (Populus trichocarpa)
FCD_00025218 [nucleoplasm] (Ficus carica)
Gasu_14290 [nucleoplasm] (Galdieria sulphuraria)
PRUPE_1G146000 [nucleoplasm] (Prunus persica)
Potri.001G359700.v4.1 [nucleoplasm] (Populus trichocarpa)
Pav_sc0004467.1_g010.1.mk [nucleoplasm] (Prunus avium)
Manes.15G065000.v8.1 [nucleoplasm] (Manihot esculenta)
GSBRNA2T00095411001 [nucleoplasm] (Brassica napus)
QL08p008078 [nucleoplasm] (Quercus lobata)
TraesCS7D02G297500 [nucleoplasm] (Triticum aestivum)
Tp57577_TGAC_v2_gene25818 [nucleoplasm] (Trifolium pratense)
Tritim_EIv0.3_0294610 [nucleoplasm] (Triticum timopheevii subsp. timopheevii)
g04593 [nucleoplasm] (Arabidopsis halleri)
TraesCS2A02G495200 [nucleoplasm] (Triticum aestivum)
Csa02g057800 [nucleoplasm] (Camelina sativa)
gene-LATHSAT_LOCUS27691 [nucleoplasm] (Lathyrus sativus)
MD13G0156700 [nucleoplasm] (Malus domestica)
Bo1g046620 [nucleoplasm] (Brassica oleracea)
TRIDC2AG070070 [nucleoplasm] (Triticum dicoccoides)
gene19786 [nucleoplasm] (Medicago truncatula)
HORVU.MOREX.r3.2HG0201870 [nucleoplasm] (Hordeum vulgare)
Tp57577_TGAC_v2_gene38130 [nucleoplasm] (Trifolium pratense)
TraesCS2B02G525600 [nucleoplasm] (Triticum aestivum)
Bo9g120320 [nucleoplasm] (Brassica oleracea)
Solyc07g049720.3 [nucleoplasm] (Solanum lycopersicum)
scaffold215.153 [nucleoplasm] (Echinochloa crus-galli)
AUR62006141 [nucleoplasm] (Chenopodium quinoa)
AVESA.00001b.r3.7Cg0002455 [nucleoplasm] (Avena sativa)
AET7Gv20754400 [nucleoplasm] (Aegilops tauschii)
arahy.Tifrunner.gnm2.ann2.Ah03g104100 [nucleoplasm] (Arachis hypogaea)
CCACVL1_11312 [nucleoplasm] (Corchorus capsularis)
CMM263C [nucleoplasm] (Cyanidioschyzon merolae)
TraesTSP7D01G328200 [nucleoplasm] (Triticum spelta subsp. spelta)
TCM_030764 [nucleoplasm] (Theobroma cacao)
DRNTG_27406 [nucleoplasm] (Dioscorea rotundata)
gene-LATHSAT_LOCUS23463 [nucleoplasm] (Lathyrus sativus)
gene-LSAT_1X128740 [nucleoplasm] (Lactuca sativa)
GSBRNA2T00013006001 [nucleoplasm] (Brassica napus)
BRADI_3g16920v3 [nucleoplasm] (Brachypodium distachyon)
FRAEX38873_v2_000170080 [nucleoplasm] (Fraxinus excelsior (European ash))
LOC114378422 [nucleoplasm] (Glycine soja)
scaffold18.192 [nucleoplasm] (Echinochloa crus-galli)
AT5G55300 [nucleoplasm] (Arabidopsis thaliana)
RchiOBHm_Chr4g0420301 [nucleoplasm] (Rosa chinensis)
CHLRE_03g178600v5 [nucleoplasm] (Chlamydomonas reinhardtii)
Csa10g016090 [nucleoplasm] (Camelina sativa)
Csa12g025150 [nucleoplasm] (Camelina sativa)
Aco008016.1.path1 [nucleoplasm] (Ananas comosus)
AeUmb.TA1851.r1.7UG0010600 [nucleoplasm] (Aegilops umbellulata)
Psat6g102320 [nucleoplasm] (Pisum sativum)
Vfaba.Hedin2.R1.6g004920 [nucleoplasm] (Vicia faba var. faba)
Et_8A_058083 [nucleoplasm] (Eragrostis tef)
B456_009G444700 [nucleoplasm] (Gossypium raimondii)
DCAR_008813 [nucleoplasm] (Daucus carota)
BVRB_4g089570 [nucleoplasm] (Beta vulgaris)
A01g502960.1_BraROA [nucleoplasm] (Brassica rapa)
A4U43_C05F30370 [nucleoplasm] (Asparagus officinalis)
B456_007G311800 [nucleoplasm] (Gossypium raimondii)
HanXRQr2_Chr01g0006921 [nucleoplasm] (Helianthus annuus)
Et_8B_060443 [nucleoplasm] (Eragrostis tef)
Zm00001eb172650 [nucleoplasm] (Zea mays ver5)
SORBI_3007G043500 [nucleoplasm] (Sorghum bicolor)
CBR_g39191 [nucleoplasm] (Chara braunii)
© 2019
Gramene - Plant Reactome