{
  "dbId" : 10851422,
  "stableId" : "R-TPR-9626305",
  "displayName" : "Regulatory network of nutrient accumulation",
  "nodes" : [ {
    "id" : 4595,
    "reactomeId" : 10850132,
    "displayName" : "Rab5a:GDP",
    "schemaClass" : "Complex",
    "renderableClass" : "Complex",
    "position" : {
      "x" : 425,
      "y" : 593
    },
    "minX" : 387,
    "maxX" : 464,
    "minY" : 568,
    "maxY" : 604,
    "prop" : {
      "x" : 387,
      "y" : 583,
      "width" : 77,
      "height" : 21
    },
    "textPosition" : {
      "x" : 391,
      "y" : 582
    },
    "bgColor" : {
      "r" : 204,
      "g" : 255,
      "b" : 255
    },
    "connectors" : [ {
      "edgeId" : 4594,
      "type" : "INPUT",
      "segments" : [ {
        "from" : {
          "x" : 424,
          "y" : 580
        },
        "to" : {
          "x" : 424,
          "y" : 568
        }
      } ],
      "stoichiometry" : {
        "value" : 1
      }
    } ]
  }, {
    "id" : 4611,
    "reactomeId" : 10851420,
    "displayName" : "Starch biosynthesis",
    "schemaClass" : "Pathway",
    "renderableClass" : "ProcessNode",
    "position" : {
      "x" : 1307,
      "y" : 251
    },
    "minX" : 1249,
    "maxX" : 1365,
    "minY" : 220,
    "maxY" : 283,
    "prop" : {
      "x" : 1249,
      "y" : 220,
      "width" : 116,
      "height" : 63
    },
    "textPosition" : {
      "x" : 1264,
      "y" : 229
    },
    "connectors" : [ ]
  }, {
    "id" : 4596,
    "reactomeId" : 29438,
    "displayName" : "GTP",
    "schemaClass" : "SimpleEntity",
    "renderableClass" : "Chemical",
    "position" : {
      "x" : 341,
      "y" : 584
    },
    "minX" : 320,
    "maxX" : 424,
    "minY" : 568,
    "maxY" : 599,
    "prop" : {
      "x" : 320,
      "y" : 569,
      "width" : 43,
      "height" : 30
    },
    "textPosition" : {
      "x" : 325,
      "y" : 573
    },
    "interactorsSummary" : {
      "type" : "TR",
      "shape" : {
        "c" : {
          "x" : 358,
          "y" : 574
        },
        "r" : 6,
        "type" : "CIRCLE",
        "empty" : true
      }
    },
    "connectors" : [ {
      "edgeId" : 4594,
      "type" : "INPUT",
      "segments" : [ {
        "from" : {
          "x" : 366,
          "y" : 579
        },
        "to" : {
          "x" : 424,
          "y" : 568
        }
      } ],
      "stoichiometry" : {
        "value" : 1
      }
    } ]
  }, {
    "id" : 4597,
    "reactomeId" : 29420,
    "displayName" : "GDP",
    "schemaClass" : "SimpleEntity",
    "renderableClass" : "Chemical",
    "position" : {
      "x" : 345,
      "y" : 485
    },
    "minX" : 324,
    "maxX" : 424,
    "minY" : 469,
    "maxY" : 533,
    "prop" : {
      "x" : 324,
      "y" : 470,
      "width" : 43,
      "height" : 30
    },
    "textPosition" : {
      "x" : 330,
      "y" : 474
    },
    "interactorsSummary" : {
      "type" : "TR",
      "shape" : {
        "c" : {
          "x" : 362,
          "y" : 475
        },
        "r" : 6,
        "type" : "CIRCLE",
        "empty" : true
      }
    },
    "connectors" : [ {
      "edgeId" : 4594,
      "type" : "OUTPUT",
      "segments" : [ {
        "from" : {
          "x" : 361,
          "y" : 503
        },
        "to" : {
          "x" : 383,
          "y" : 519
        }
      }, {
        "from" : {
          "x" : 383,
          "y" : 519
        },
        "to" : {
          "x" : 424,
          "y" : 533
        }
      } ],
      "stoichiometry" : {
        "value" : 1
      },
      "endShape" : {
        "a" : {
          "x" : 369,
          "y" : 504
        },
        "b" : {
          "x" : 361,
          "y" : 503
        },
        "c" : {
          "x" : 364,
          "y" : 510
        },
        "type" : "ARROW"
      }
    } ]
  }, {
    "id" : 4598,
    "reactomeId" : 10850126,
    "displayName" : "Rab5a:GTP",
    "schemaClass" : "Complex",
    "renderableClass" : "Complex",
    "position" : {
      "x" : 424,
      "y" : 496
    },
    "minX" : 381,
    "maxX" : 467,
    "minY" : 463,
    "maxY" : 533,
    "prop" : {
      "x" : 381,
      "y" : 485,
      "width" : 86,
      "height" : 22
    },
    "textPosition" : {
      "x" : 389,
      "y" : 485
    },
    "bgColor" : {
      "r" : 204,
      "g" : 255,
      "b" : 255
    },
    "connectors" : [ {
      "edgeId" : 4594,
      "type" : "OUTPUT",
      "segments" : [ {
        "from" : {
          "x" : 424,
          "y" : 510
        },
        "to" : {
          "x" : 424,
          "y" : 533
        }
      } ],
      "stoichiometry" : {
        "value" : 1
      },
      "endShape" : {
        "a" : {
          "x" : 428,
          "y" : 517
        },
        "b" : {
          "x" : 424,
          "y" : 510
        },
        "c" : {
          "x" : 420,
          "y" : 517
        },
        "type" : "ARROW"
      }
    }, {
      "edgeId" : 4600,
      "type" : "INPUT",
      "segments" : [ {
        "from" : {
          "x" : 423,
          "y" : 482
        },
        "to" : {
          "x" : 423,
          "y" : 463
        }
      } ],
      "stoichiometry" : {
        "value" : 1
      }
    } ]
  }, {
    "id" : 4599,
    "reactomeId" : 10850120,
    "displayName" : "GPA3-VPS9a complex",
    "schemaClass" : "Complex",
    "renderableClass" : "Complex",
    "position" : {
      "x" : 240,
      "y" : 462
    },
    "minX" : 198,
    "maxX" : 423,
    "minY" : 444,
    "maxY" : 553,
    "prop" : {
      "x" : 198,
      "y" : 444,
      "width" : 84,
      "height" : 36
    },
    "textPosition" : {
      "x" : 200,
      "y" : 444
    },
    "bgColor" : {
      "r" : 204,
      "g" : 255,
      "b" : 255
    },
    "connectors" : [ {
      "edgeId" : 4594,
      "type" : "ACTIVATOR",
      "segments" : [ {
        "from" : {
          "x" : 275,
          "y" : 483
        },
        "to" : {
          "x" : 416,
          "y" : 552
        }
      } ],
      "stoichiometry" : {
        "value" : 1
      },
      "endShape" : {
        "a" : {
          "x" : 408,
          "y" : 553
        },
        "b" : {
          "x" : 416,
          "y" : 552
        },
        "c" : {
          "x" : 412,
          "y" : 545
        },
        "type" : "ARROW",
        "empty" : true
      }
    }, {
      "edgeId" : 4600,
      "type" : "INPUT",
      "segments" : [ {
        "from" : {
          "x" : 285,
          "y" : 462
        },
        "to" : {
          "x" : 423,
          "y" : 463
        }
      } ],
      "stoichiometry" : {
        "value" : 1
      }
    } ]
  }, {
    "id" : 4601,
    "reactomeId" : 10850128,
    "displayName" : "GPA3-VPS9a-Rab5a:GTP",
    "schemaClass" : "Complex",
    "renderableClass" : "Complex",
    "position" : {
      "x" : 561,
      "y" : 437
    },
    "minX" : 480,
    "maxX" : 642,
    "minY" : 428,
    "maxY" : 447,
    "prop" : {
      "x" : 480,
      "y" : 428,
      "width" : 162,
      "height" : 19
    },
    "textPosition" : {
      "x" : 490,
      "y" : 425
    },
    "bgColor" : {
      "r" : 204,
      "g" : 255,
      "b" : 255
    },
    "connectors" : [ {
      "edgeId" : 4600,
      "type" : "OUTPUT",
      "segments" : [ ],
      "stoichiometry" : {
        "value" : 1
      }
    } ]
  }, {
    "id" : 4603,
    "reactomeId" : 9626586,
    "displayName" : "a 1,4-alpha-D-glucan",
    "schemaClass" : "SimpleEntity",
    "renderableClass" : "Chemical",
    "position" : {
      "x" : 790,
      "y" : 623
    },
    "minX" : 738,
    "maxX" : 843,
    "minY" : 600,
    "maxY" : 645,
    "prop" : {
      "x" : 738,
      "y" : 601,
      "width" : 104,
      "height" : 44
    },
    "textPosition" : {
      "x" : 749,
      "y" : 605
    },
    "interactorsSummary" : {
      "type" : "TR",
      "shape" : {
        "c" : {
          "x" : 837,
          "y" : 606
        },
        "r" : 6,
        "type" : "CIRCLE",
        "empty" : true
      }
    },
    "connectors" : [ {
      "edgeId" : 4602,
      "type" : "OUTPUT",
      "segments" : [ ],
      "stoichiometry" : {
        "value" : 1
      }
    }, {
      "edgeId" : 4605,
      "type" : "INPUT",
      "segments" : [ ],
      "stoichiometry" : {
        "value" : 1
      }
    } ]
  }, {
    "id" : 4604,
    "reactomeId" : 10850106,
    "displayName" : "BE",
    "schemaClass" : "DefinedSet",
    "renderableClass" : "EntitySet",
    "position" : {
      "x" : 842,
      "y" : 571
    },
    "minX" : 797,
    "maxX" : 857,
    "minY" : 560,
    "maxY" : 582,
    "prop" : {
      "x" : 827,
      "y" : 560,
      "width" : 30,
      "height" : 22
    },
    "textPosition" : {
      "x" : 830,
      "y" : 560
    },
    "connectors" : [ {
      "edgeId" : 4602,
      "type" : "CATALYST",
      "segments" : [ {
        "from" : {
          "x" : 821,
          "y" : 570
        },
        "to" : {
          "x" : 805,
          "y" : 570
        }
      } ],
      "stoichiometry" : {
        "value" : 1
      },
      "endShape" : {
        "c" : {
          "x" : 801,
          "y" : 570
        },
        "r" : 4,
        "type" : "CIRCLE",
        "empty" : true
      }
    } ]
  }, {
    "id" : 4606,
    "reactomeId" : 9626408,
    "displayName" : "amylopectin",
    "schemaClass" : "SimpleEntity",
    "renderableClass" : "Chemical",
    "position" : {
      "x" : 791,
      "y" : 739
    },
    "minX" : 751,
    "maxX" : 833,
    "minY" : 723,
    "maxY" : 754,
    "prop" : {
      "x" : 751,
      "y" : 724,
      "width" : 81,
      "height" : 30
    },
    "textPosition" : {
      "x" : 754,
      "y" : 728
    },
    "interactorsSummary" : {
      "type" : "TR",
      "shape" : {
        "c" : {
          "x" : 827,
          "y" : 729
        },
        "r" : 6,
        "type" : "CIRCLE",
        "empty" : true
      }
    },
    "connectors" : [ {
      "edgeId" : 4605,
      "type" : "OUTPUT",
      "segments" : [ ],
      "stoichiometry" : {
        "value" : 1
      }
    } ]
  }, {
    "id" : 4607,
    "reactomeId" : 10850113,
    "displayName" : "Tp57577_TGAC_v2_gene37858",
    "schemaClass" : "EntityWithAccessionedSequence",
    "renderableClass" : "EntitySet",
    "position" : {
      "x" : 840,
      "y" : 688
    },
    "minX" : 798,
    "maxX" : 858,
    "minY" : 677,
    "maxY" : 699,
    "prop" : {
      "x" : 823,
      "y" : 677,
      "width" : 35,
      "height" : 22
    },
    "textPosition" : {
      "x" : 823,
      "y" : 628
    },
    "connectors" : [ {
      "edgeId" : 4605,
      "type" : "CATALYST",
      "segments" : [ {
        "from" : {
          "x" : 817,
          "y" : 687
        },
        "to" : {
          "x" : 806,
          "y" : 687
        }
      } ],
      "stoichiometry" : {
        "value" : 1
      },
      "endShape" : {
        "c" : {
          "x" : 802,
          "y" : 686
        },
        "r" : 4,
        "type" : "CIRCLE",
        "empty" : true
      }
    } ]
  } ],
  "edges" : [ {
    "id" : 4594,
    "reactomeId" : 10850134,
    "displayName" : "Conversion of Rab5a:GDP into Rab5a:GTP",
    "schemaClass" : "Reaction",
    "renderableClass" : "Reaction",
    "position" : {
      "x" : 424,
      "y" : 556
    },
    "minX" : 418,
    "maxX" : 430,
    "minY" : 533,
    "maxY" : 568,
    "segments" : [ {
      "from" : {
        "x" : 424,
        "y" : 568
      },
      "to" : {
        "x" : 424,
        "y" : 556
      }
    }, {
      "from" : {
        "x" : 424,
        "y" : 556
      },
      "to" : {
        "x" : 424,
        "y" : 533
      }
    } ],
    "reactionShape" : {
      "a" : {
        "x" : 418,
        "y" : 550
      },
      "b" : {
        "x" : 430,
        "y" : 562
      },
      "type" : "BOX",
      "empty" : true
    },
    "inputs" : [ {
      "id" : 4595,
      "points" : [ {
        "x" : 424,
        "y" : 580
      } ]
    }, {
      "id" : 4596,
      "points" : [ {
        "x" : 366,
        "y" : 579
      } ]
    } ],
    "outputs" : [ {
      "id" : 4597,
      "points" : [ {
        "x" : 361,
        "y" : 503
      }, {
        "x" : 383,
        "y" : 519
      } ]
    }, {
      "id" : 4598,
      "points" : [ {
        "x" : 424,
        "y" : 510
      } ]
    } ],
    "activators" : [ {
      "id" : 4599,
      "points" : [ {
        "x" : 275,
        "y" : 483
      } ]
    } ]
  }, {
    "id" : 4600,
    "reactomeId" : 10850130,
    "displayName" : "Physical interaction of GPA3 with Rab5a via VPS9a",
    "schemaClass" : "Reaction",
    "renderableClass" : "Reaction",
    "position" : {
      "x" : 425,
      "y" : 436
    },
    "minX" : 419,
    "maxX" : 477,
    "minY" : 430,
    "maxY" : 463,
    "segments" : [ {
      "from" : {
        "x" : 423,
        "y" : 463
      },
      "to" : {
        "x" : 425,
        "y" : 436
      }
    }, {
      "from" : {
        "x" : 425,
        "y" : 436
      },
      "to" : {
        "x" : 477,
        "y" : 436
      }
    } ],
    "endShape" : {
      "a" : {
        "x" : 470,
        "y" : 440
      },
      "b" : {
        "x" : 477,
        "y" : 436
      },
      "c" : {
        "x" : 470,
        "y" : 432
      },
      "type" : "ARROW"
    },
    "reactionShape" : {
      "a" : {
        "x" : 419,
        "y" : 430
      },
      "b" : {
        "x" : 431,
        "y" : 442
      },
      "type" : "BOX",
      "empty" : true
    },
    "inputs" : [ {
      "id" : 4599,
      "points" : [ {
        "x" : 285,
        "y" : 462
      } ]
    }, {
      "id" : 4598,
      "points" : [ {
        "x" : 423,
        "y" : 482
      } ]
    } ],
    "outputs" : [ {
      "id" : 4601
    } ]
  }, {
    "id" : 4602,
    "reactomeId" : 10850109,
    "displayName" : "Synthesis of highly branched alpha-glucan",
    "schemaClass" : "Reaction",
    "renderableClass" : "Reaction",
    "position" : {
      "x" : 789,
      "y" : 570
    },
    "minX" : 783,
    "maxX" : 795,
    "minY" : 536,
    "maxY" : 598,
    "segments" : [ {
      "from" : {
        "x" : 789,
        "y" : 536
      },
      "to" : {
        "x" : 789,
        "y" : 570
      }
    }, {
      "from" : {
        "x" : 789,
        "y" : 570
      },
      "to" : {
        "x" : 789,
        "y" : 598
      }
    } ],
    "endShape" : {
      "a" : {
        "x" : 785,
        "y" : 591
      },
      "b" : {
        "x" : 789,
        "y" : 598
      },
      "c" : {
        "x" : 793,
        "y" : 591
      },
      "type" : "ARROW"
    },
    "reactionShape" : {
      "a" : {
        "x" : 783,
        "y" : 564
      },
      "b" : {
        "x" : 795,
        "y" : 576
      },
      "type" : "BOX",
      "empty" : true
    },
    "outputs" : [ {
      "id" : 4603
    } ],
    "catalysts" : [ {
      "id" : 4604,
      "points" : [ {
        "x" : 821,
        "y" : 570
      } ]
    } ]
  }, {
    "id" : 4605,
    "reactomeId" : 10850116,
    "displayName" : "Synthesis of amylopectin",
    "schemaClass" : "Reaction",
    "renderableClass" : "Reaction",
    "position" : {
      "x" : 790,
      "y" : 686
    },
    "minX" : 784,
    "maxX" : 796,
    "minY" : 648,
    "maxY" : 721,
    "segments" : [ {
      "from" : {
        "x" : 790,
        "y" : 648
      },
      "to" : {
        "x" : 790,
        "y" : 686
      }
    }, {
      "from" : {
        "x" : 790,
        "y" : 686
      },
      "to" : {
        "x" : 790,
        "y" : 721
      }
    } ],
    "endShape" : {
      "a" : {
        "x" : 786,
        "y" : 714
      },
      "b" : {
        "x" : 790,
        "y" : 721
      },
      "c" : {
        "x" : 794,
        "y" : 714
      },
      "type" : "ARROW"
    },
    "reactionShape" : {
      "a" : {
        "x" : 784,
        "y" : 680
      },
      "b" : {
        "x" : 796,
        "y" : 692
      },
      "type" : "BOX",
      "empty" : true
    },
    "inputs" : [ {
      "id" : 4603
    } ],
    "outputs" : [ {
      "id" : 4606
    } ],
    "catalysts" : [ {
      "id" : 4607,
      "points" : [ {
        "x" : 817,
        "y" : 687
      } ]
    } ]
  } ],
  "compartments" : [ {
    "id" : 4608,
    "reactomeId" : 70101,
    "displayName" : "cytosol",
    "schemaClass" : "Compartment",
    "renderableClass" : "Compartment",
    "position" : {
      "x" : 590,
      "y" : 416
    },
    "minX" : 5,
    "maxX" : 1175,
    "minY" : 20,
    "maxY" : 812,
    "prop" : {
      "x" : 5,
      "y" : 20,
      "width" : 1170,
      "height" : 792
    },
    "textPosition" : {
      "x" : 17,
      "y" : 30
    },
    "insets" : {
      "x" : 15,
      "y" : 30,
      "width" : 1150,
      "height" : 772
    },
    "bgColor" : {
      "r" : 250,
      "g" : 240,
      "b" : 240
    },
    "componentIds" : [ 4609, 4614, 4615, 4626, 4610, 4627, 4621, 4629, 4624, 4628, 4625, 4622, 4596, 4597, 4623 ]
  }, {
    "id" : 4609,
    "reactomeId" : 7660,
    "displayName" : "nucleoplasm",
    "schemaClass" : "Compartment",
    "renderableClass" : "Compartment",
    "position" : {
      "x" : 428,
      "y" : 218
    },
    "minX" : 69,
    "maxX" : 788,
    "minY" : 50,
    "maxY" : 387,
    "prop" : {
      "x" : 69,
      "y" : 50,
      "width" : 719,
      "height" : 337
    },
    "textPosition" : {
      "x" : 82,
      "y" : 65
    },
    "insets" : {
      "x" : 79,
      "y" : 60,
      "width" : 699,
      "height" : 317
    },
    "bgColor" : {
      "r" : 250,
      "g" : 240,
      "b" : 240
    }
  }, {
    "id" : 4610,
    "reactomeId" : 1141,
    "displayName" : "plastid stroma",
    "schemaClass" : "Compartment",
    "renderableClass" : "Compartment",
    "position" : {
      "x" : 914,
      "y" : 601
    },
    "minX" : 717,
    "maxX" : 1111,
    "minY" : 429,
    "maxY" : 773,
    "prop" : {
      "x" : 717,
      "y" : 429,
      "width" : 394,
      "height" : 344
    },
    "textPosition" : {
      "x" : 728,
      "y" : 441
    },
    "insets" : {
      "x" : 727,
      "y" : 439,
      "width" : 374,
      "height" : 324
    },
    "bgColor" : {
      "r" : 250,
      "g" : 240,
      "b" : 240
    },
    "componentIds" : [ 4602, 4603, 4604, 4606, 4607, 4605 ]
  }, {
    "id" : 4614,
    "reactomeId" : 13951,
    "displayName" : "Golgi-associated vesicle",
    "schemaClass" : "Compartment",
    "renderableClass" : "Compartment",
    "position" : {
      "x" : 542,
      "y" : 515
    },
    "minX" : 419,
    "maxX" : 666,
    "minY" : 432,
    "maxY" : 598,
    "prop" : {
      "x" : 419,
      "y" : 432,
      "width" : 247,
      "height" : 166
    },
    "textPosition" : {
      "x" : 471,
      "y" : 497
    },
    "insets" : {
      "x" : 429,
      "y" : 442,
      "width" : 227,
      "height" : 146
    },
    "bgColor" : {
      "r" : 250,
      "g" : 240,
      "b" : 240
    },
    "componentIds" : [ 4601, 4598, 4594, 4600, 4595 ]
  }, {
    "id" : 4615,
    "reactomeId" : 17957,
    "displayName" : "endoplasmic reticulum lumen",
    "schemaClass" : "Compartment",
    "renderableClass" : "Compartment",
    "position" : {
      "x" : 1012,
      "y" : 85
    },
    "minX" : 911,
    "maxX" : 1114,
    "minY" : 38,
    "maxY" : 133,
    "prop" : {
      "x" : 911,
      "y" : 38,
      "width" : 203,
      "height" : 95
    },
    "textPosition" : {
      "x" : 913,
      "y" : 89
    },
    "insets" : {
      "x" : 921,
      "y" : 48,
      "width" : 183,
      "height" : 75
    },
    "bgColor" : {
      "r" : 250,
      "g" : 240,
      "b" : 240
    }
  } ],
  "notes" : [ ],
  "links" : [ ],
  "shadows" : [ ],
  "minX" : 5,
  "maxX" : 1365,
  "minY" : 20,
  "maxY" : 812,
  "disease" : false
}