A01g500290.1_BraROA R-BRA-1129700-2 A01g500290.1_BraROA [cytosol] R-BRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119610 Biotin biosynthesis II none Brassica rapa A01g500300.1_BraROA R-BRA-9639957 A01g500300.1_BraROA [plasma membrane] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A01g502110.1_BraROA R-BRA-1127338-2 A01g502110.1_BraROA [mitochondrial inner membrane] R-BRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119402 Phospholipid biosynthesis I none Brassica rapa A01g502440.1_BraROA R-BRA-2960195-2 A01g502440.1_BraROA [cytosol] R-BRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119410 Ascorbate biosynthesis none Brassica rapa A01g502440.1_BraROA R-BRA-2960195-2 A01g502440.1_BraROA [cytosol] R-BRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119570 Cytosolic glycolysis none Brassica rapa A01g502960.1_BraROA R-BRA-9675426 A01g502960.1_BraROA [nucleoplasm] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A01g503340.1_BraROA R-BRA-9658589 A01g503340.1_BraROA [endoplasmic reticulum lumen] R-BRA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119502 Allantoin degradation none Brassica rapa A01g505150.1_BraROA R-BRA-1128980-2 A01g505150.1_BraROA [cytosol] R-BRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119586 Cyanate degradation none Brassica rapa A01g508810.1_BraROA R-BRA-9675354 A01g508810.1_BraROA [nucleoplasm] R-BRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675508 Root elongation none Brassica rapa A01g508810.1_BraROA R-BRA-9675335 A01g508810.1_BraROA [mitochondrial matrix] R-BRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675508 Root elongation none Brassica rapa A01g509960.1_BraROA R-BRA-1122843 A01g509960.1_BraROA [cytosol] R-BRA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119458 Glutamate degradation none Brassica rapa A01g510400.1_BraROA R-BRA-9035727-5 A01g510400.1_BraROA [cytosol] R-BRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9035605 Regulation of seed size none Brassica rapa A01g510400.1_BraROA R-BRA-9035692-5 A01g510400.1_BraROA [nucleoplasm] R-BRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9035605 Regulation of seed size none Brassica rapa A01g510420.1_BraROA R-BRA-1127338-3 A01g510420.1_BraROA [mitochondrial inner membrane] R-BRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119402 Phospholipid biosynthesis I none Brassica rapa A01g510710.1_BraROA R-BRA-5149643-3 A01g510710.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A01g510750.1_BraROA R-BRA-9681885-4 A01g510750.1_BraROA [Golgi membrane] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A01g510900.1_BraROA R-BRA-6788172-2 A01g510900.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A01g510920.1_BraROA R-BRA-9640763-3 A01g510920.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A01g510920.1_BraROA R-BRA-9640885-3 phospho-A01g510920.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A01g511570.1_BraROA R-BRA-9916124-3 OsPRX95 [extracellular region] R-BRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119403 Removal of superoxide radicals none Brassica rapa A01g511570.1_BraROA R-BRA-9916124-3 OsPRX95 [extracellular region] R-BRA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9607185 Generation of superoxide radicals none Brassica rapa A01p000070.1_BraROA R-BRA-1127820 A01p000070.1_BraROA [plasma membrane] R-BRA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119314 Cellulose biosynthesis none Brassica rapa A01p000300.1_BraROA R-BRA-9826692 A01p000300.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A01p000570.1_BraROA R-BRA-1130308 A01p000570.1_BraROA [plastid stroma] R-BRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119430 Chorismate biosynthesis none Brassica rapa A01p000890.1_BraROA R-BRA-1129964-3 A01p000890.1_BraROA [cytosol] R-BRA-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119378 Myo-inositol biosynthesis none Brassica rapa A01p000890.1_BraROA R-BRA-1129964-3 A01p000890.1_BraROA [cytosol] R-BRA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119434 Phytic acid biosynthesis (lipid-independent) none Brassica rapa A01p001000.1_BraROA R-BRA-1130084-6 A01p001000.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A01p001040.1_BraROA R-BRA-1125832-2 A01p001040.1_BraROA [plastid stroma] R-BRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119430 Chorismate biosynthesis none Brassica rapa A01p001440.1_BraROA R-BRA-1123895 A01p001440.1_BraROA [cytosol] R-BRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119334 Ethylene biosynthesis from methionine none Brassica rapa A01p001440.1_BraROA R-BRA-1123895 A01p001440.1_BraROA [cytosol] R-BRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119624 Methionine salvage pathway none Brassica rapa A01p001470.1_BraROA R-BRA-9035593 A01p001470.1_BraROA [cytosol] R-BRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9035605 Regulation of seed size none Brassica rapa A01p001470.1_BraROA R-BRA-9035634 A01p001470.1_BraROA [nucleoplasm] R-BRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9035605 Regulation of seed size none Brassica rapa A01p001470.1_BraROA R-BRA-9035593 A01p001470.1_BraROA [cytosol] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A01p001470.1_BraROA R-BRA-9035634 A01p001470.1_BraROA [nucleoplasm] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A01p001500.1_BraROA R-BRA-9658611-2 A01p001500.1_BraROA [plastid stroma] R-BRA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119263 Arginine biosynthesis none Brassica rapa A01p001500.1_BraROA R-BRA-9658611-2 A01p001500.1_BraROA [plastid stroma] R-BRA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119539 Ornithine biosynthesis none Brassica rapa A01p001500.1_BraROA R-BRA-9658611-2 A01p001500.1_BraROA [plastid stroma] R-BRA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119622 Arginine biosynthesis II (acetyl cycle) none Brassica rapa A01p001900.1_BraROA R-BRA-8879009 A01p001900.1_BraROA [nucleoplasm] R-BRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8879007 Response to cold temperature none Brassica rapa A01p002270.1_BraROA R-BRA-5632334-6 A01p002270.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A01p002270.1_BraROA R-BRA-5632197-6 phospho-A01p002270.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A01p002270.1_BraROA R-BRA-5632183-6 phospho-A01p002270.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A01p002270.1_BraROA R-BRA-5632334-6 A01p002270.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A01p002320.1_BraROA R-BRA-9826620-2 HOX12/ OsGT1 [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A01p002320.1_BraROA R-BRA-9826620-2 HOX12/ OsGT1 [nucleoplasm] R-BRA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Brassica rapa A01p002440.1_BraROA R-BRA-1127815-3 A01p002440.1_BraROA [cytosol] R-BRA-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119450 Homocysteine biosynthesis none Brassica rapa A01p002700.1_BraROA R-BRA-1128613-4 A01p002700.1_BraROA [cytosol] R-BRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119316 Phenylpropanoid biosynthesis none Brassica rapa A01p003010.1_BraROA R-BRA-1130136-2 A01p003010.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A01p003010.1_BraROA R-BRA-1130136-2 A01p003010.1_BraROA [mitochondrial matrix] R-BRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119540 Leucine biosynthesis none Brassica rapa A01p003350.1_BraROA R-BRA-9826666 A01p003350.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A01p003380.1_BraROA R-BRA-1130152 A01p003380.1_BraROA [cytosol] R-BRA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119394 Pantothenate and coenzyme A biosynthesis III none Brassica rapa A01p003420.1_BraROA R-BRA-5221147-3 A01p003420.1_BraROA [cytosol] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A01p003500.1_BraROA R-BRA-1125494-2 A01p003500.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119402 Phospholipid biosynthesis I none Brassica rapa A01p003710.1_BraROA R-BRA-9618156 A01p003710.1_BraROA [plasma membrane] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A01p003880.1_BraROA R-BRA-1129600 A01p003880.1_BraROA [cytosol] R-BRA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119407 Ureide biosynthesis none Brassica rapa A01p004080.1_BraROA R-BRA-1123832 A01p004080.1_BraROA [cytosol] R-BRA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119304 Putrescine biosynthesis II none Brassica rapa A01p004080.1_BraROA R-BRA-1123832 A01p004080.1_BraROA [cytosol] R-BRA-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119447 Putrescine biosynthesis I none Brassica rapa A01p004120.1_BraROA R-BRA-1128707-3 A01p004120.1_BraROA [cytosol] R-BRA-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Brassica rapa A01p004120.1_BraROA R-BRA-1128707-3 A01p004120.1_BraROA [cytosol] R-BRA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119370 Sterol biosynthesis none Brassica rapa A01p004120.1_BraROA R-BRA-1128707-3 A01p004120.1_BraROA [cytosol] R-BRA-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119439 Cholesterol biosynthesis III (via desmosterol) none Brassica rapa A01p004120.1_BraROA R-BRA-1128707-3 A01p004120.1_BraROA [cytosol] R-BRA-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119559 Cholesterol biosynthesis I none Brassica rapa A01p004420.1_BraROA R-BRA-1128745-2 A01p004420.1_BraROA [plastid stroma] R-BRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119464 Methylerythritol phosphate pathway none Brassica rapa A01p004540.1_BraROA R-BRA-1125967-3 A01p004540.1_BraROA [cytosol] R-BRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119316 Phenylpropanoid biosynthesis none Brassica rapa A01p004720.1_BraROA R-BRA-9928801-5 A01p004720.1_BraROA [nucleoplasm] R-BRA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928995 Drought escape (DE) via ABA-dependent pathway none Brassica rapa A01p004760.1_BraROA R-BRA-4415007-2 A01p004760.1_BraROA [cytosol] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A01p004760.1_BraROA R-BRA-4415016-2 phospho-A01p004760.1_BraROA [cytosol] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A01p004760.1_BraROA R-BRA-4415007-2 A01p004760.1_BraROA [cytosol] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A01p004860.1_BraROA R-BRA-9639029-3 A01p004860.1_BraROA [cytosol] R-BRA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119434 Phytic acid biosynthesis (lipid-independent) none Brassica rapa A01p004930.1_BraROA R-BRA-5606478-2 A01p004930.1_BraROA [plastid stroma] R-BRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119419 Lysine biosynthesis VI none Brassica rapa A01p005050.1_BraROA R-BRA-1125832 A01p005050.1_BraROA [plastid stroma] R-BRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119430 Chorismate biosynthesis none Brassica rapa A01p005210.1_BraROA R-BRA-5654911 A01p005210.1_BraROA [Golgi lumen] R-BRA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5654909 Xylan biosynthesis none Brassica rapa A01p005310.1_BraROA R-BRA-1129571 A01p005310.1_BraROA [mitochondrion] R-BRA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119365 Lysine degradation II none Brassica rapa A01p005480.1_BraROA R-BRA-8987557 A01p005480.1_BraROA [mitochondrial matrix] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A01p005680.1_BraROA R-BRA-5367761 A01p005680.1_BraROA [plastid stroma] R-BRA-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5367729 Strigolactone biosynthesis none Brassica rapa A01p006070.1_BraROA R-BRA-1126875-2 A01p006070.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A01p006170.1_BraROA R-BRA-1130088 A01p006170.1_BraROA [plasma membrane] R-BRA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119314 Cellulose biosynthesis none Brassica rapa A01p006400.1_BraROA R-BRA-1127502 A01p006400.1_BraROA [cytosol] R-BRA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119394 Pantothenate and coenzyme A biosynthesis III none Brassica rapa A01p006440.1_BraROA R-BRA-1129485-2 A01p006440.1_BraROA [cytosol] R-BRA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119341 Galactosylcyclitol biosynthesis none Brassica rapa A01p006540.1_BraROA R-BRA-1123797 A01p006540.1_BraROA [cytosol] R-BRA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119281 Aspartate biosynthesis I none Brassica rapa A01p006680.1_BraROA R-BRA-6787933 A01p006680.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A01p006900.1_BraROA R-BRA-6788065 A01p006900.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A01p007470.1_BraROA R-BRA-1123148 A01p007470.1_BraROA [cytosol] R-BRA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119300 Glycolipid desaturation none Brassica rapa A01p007950.1_BraROA R-BRA-1129203 A01p007950.1_BraROA [cytosol] R-BRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119428 GDP-D-rhamnose biosynthesis none Brassica rapa A01p007950.1_BraROA R-BRA-1129203 A01p007950.1_BraROA [cytosol] R-BRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brassica rapa A01p008180.1_BraROA R-BRA-9920292-3 A01p008180.1_BraROA [nucleoplasm] R-BRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934108 Short day regulated expression of florigens none Brassica rapa A01p008320.1_BraROA R-BRA-5608161-3 A01p008320.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A01p008400.1_BraROA R-BRA-1129585 A01p008400.1_BraROA [cytosol] R-BRA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119265 Tetrahydrofolate biosynthesis I none Brassica rapa A01p008400.1_BraROA R-BRA-1129585 A01p008400.1_BraROA [cytosol] R-BRA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119523 Tetrahydrofolate biosynthesis II none Brassica rapa A01p008710.1_BraROA R-BRA-9658664 A01p008710.1_BraROA [plasma membrane] R-BRA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119567 Beta-alanine biosynthesis I none Brassica rapa A01p009330.1_BraROA R-BRA-1126165-2 A01p009330.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A01p009330.1_BraROA R-BRA-5608120-2 A01p009330.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A01p009410.1_BraROA R-BRA-5633387-3 A01p009410.1_BraROA [mitochondrial matrix] R-BRA-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119445 Beta-alanine biosynthesis II none Brassica rapa A01p009450.1_BraROA R-BRA-9611557 RAC1 [plasma membrane] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A01p009500.1_BraROA R-BRA-6786999 A01p009500.1_BraROA [nucleoplasm] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A01p009700.1_BraROA R-BRA-1122881-5 A01p009700.1_BraROA [cytosol] R-BRA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Brassica rapa A01p009700.1_BraROA R-BRA-1122881-5 A01p009700.1_BraROA [cytosol] R-BRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119438 Secologanin and strictosidine biosynthesis none Brassica rapa A01p009700.1_BraROA R-BRA-1122881-5 A01p009700.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A01p009740.1_BraROA R-BRA-1128385-2 A01p009740.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A01p009970.1_BraROA R-BRA-1129547-11 A01p009970.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A01p009970.1_BraROA R-BRA-1129547-11 A01p009970.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A01p009970.1_BraROA R-BRA-1129547-11 A01p009970.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A01p010030.1_BraROA R-BRA-9930313 A01p010030.1_BraROA [nucleoplasm] R-BRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9766881 TF network involved in salinity response none Brassica rapa A01p010370.1_BraROA R-BRA-5138481 A01p010370.1_BraROA [plastid stroma] R-BRA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119263 Arginine biosynthesis none Brassica rapa A01p010370.1_BraROA R-BRA-5138481 A01p010370.1_BraROA [plastid stroma] R-BRA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119539 Ornithine biosynthesis none Brassica rapa A01p010430.1_BraROA R-BRA-6787119 A01p010430.1_BraROA [nucleoplasm] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A01p010550.1_BraROA R-BRA-5632319 phospho-A01p010550.1_BraROA [plasma membrane] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A01p010810.1_BraROA R-BRA-4415060-4 A01p010810.1_BraROA [plasma membrane] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A01p010810.1_BraROA R-BRA-4415065-4 phospho-A01p010810.1_BraROA [plasma membrane] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A01p010860.1_BraROA R-BRA-5221144 A01p010860.1_BraROA [plastid] R-BRA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119374 Abscisic acid biosynthesis none Brassica rapa A01p010940.1_BraROA R-BRA-9826635 PCF8 [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A01p011390.1_BraROA R-BRA-5632139-2 A01p011390.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A01p011620.1_BraROA R-BRA-9618197-2 A01p011620.1_BraROA [plasma membrane] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A01p011820.1_BraROA R-BRA-9924558 NCED1 [plastid] R-BRA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Brassica rapa A01p011910.1_BraROA R-BRA-1128857-4 A01p011910.1_BraROA [cytosol] R-BRA-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119609 Phaseic acid biosynthesis none Brassica rapa A01p012330.1_BraROA R-BRA-6788026 A01p012330.1_BraROA [cytosol] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A01p012390.1_BraROA R-BRA-1125926 A01p012390.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A01p012390.1_BraROA R-BRA-1125926 A01p012390.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A01p012390.1_BraROA R-BRA-1125926 A01p012390.1_BraROA [cytosol] R-BRA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119295 Homoserine biosynthesis none Brassica rapa A01p012390.1_BraROA R-BRA-5606498 A01p012390.1_BraROA [plastid stroma] R-BRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119419 Lysine biosynthesis VI none Brassica rapa A01p013220.1_BraROA R-BRA-1122605 A01p013220.1_BraROA [cytosol] R-BRA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119341 Galactosylcyclitol biosynthesis none Brassica rapa A01p013570.1_BraROA R-BRA-1129569 A01p013570.1_BraROA [cytosol] R-BRA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119379 Flavin biosynthesis none Brassica rapa A01p014610.1_BraROA R-BRA-1123745 A01p014610.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119260 Cardiolipin biosynthesis none Brassica rapa A01p014610.1_BraROA R-BRA-1123745 A01p014610.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119402 Phospholipid biosynthesis I none Brassica rapa A01p015050.1_BraROA R-BRA-1130078 A01p015050.1_BraROA [cytosol] R-BRA-1119440 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119440 Anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside) none Brassica rapa A01p015050.1_BraROA R-BRA-2672102 A01p015050.1_BraROA [cytosol] R-BRA-1119514 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119514 Anthocyanin biosynthesis (delphinidin 3-O-glucoside) none Brassica rapa A01p015750.1_BraROA R-BRA-8986682-2 A01p015750.1_BraROA [extracellular region] R-BRA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8986768 Anther and pollen development none Brassica rapa A01p015850.1_BraROA R-BRA-1129547-3 A01p015850.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A01p015850.1_BraROA R-BRA-1129547-3 A01p015850.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A01p015850.1_BraROA R-BRA-1129547-3 A01p015850.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A01p015870.1_BraROA R-BRA-1129547-14 A01p015870.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A01p015870.1_BraROA R-BRA-1129547-14 A01p015870.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A01p015870.1_BraROA R-BRA-1129547-14 A01p015870.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A01p016190.1_BraROA R-BRA-1122936-2 A01p016190.1_BraROA [cytosol] R-BRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119452 Galactose degradation II none Brassica rapa A01p016350.1_BraROA R-BRA-1124788 A01p016350.1_BraROA [cytosol] R-BRA-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119601 Trehalose degradation II none Brassica rapa A01p016440.1_BraROA R-BRA-9025699-3 A01p016440.1_BraROA [plasma membrane] R-BRA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8858053 Polar auxin transport none Brassica rapa A01p016440.1_BraROA R-BRA-9025699-3 A01p016440.1_BraROA [plasma membrane] R-BRA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9025727 Iron uptake and transport in root vascular system none Brassica rapa A01p016770.1_BraROA R-BRA-5608140-2 A01p016770.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A01p017010.1_BraROA R-BRA-1126549-5 A01p017010.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A01p017170.1_BraROA R-BRA-5138489-2 A01p017170.1_BraROA [plastid stroma] R-BRA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119263 Arginine biosynthesis none Brassica rapa A01p017170.1_BraROA R-BRA-1127893-2 A01p017170.1_BraROA [cytosol] R-BRA-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119444 Canavanine biosynthesis none Brassica rapa A01p017170.1_BraROA R-BRA-5138489-2 A01p017170.1_BraROA [plastid stroma] R-BRA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119622 Arginine biosynthesis II (acetyl cycle) none Brassica rapa A01p017170.1_BraROA R-BRA-5138489-2 A01p017170.1_BraROA [plastid stroma] R-BRA-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5633340 Citrulline-nitric oxide cycle none Brassica rapa A01p018750.1_BraROA R-BRA-6788127 A01p018750.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A01p018750.1_BraROA R-BRA-6788179 A01p018750.1_BraROA [cytosol] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A01p018900.1_BraROA R-BRA-1127015-2 A01p018900.1_BraROA [cytosol] R-BRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119334 Ethylene biosynthesis from methionine none Brassica rapa A01p018900.1_BraROA R-BRA-1127015-2 A01p018900.1_BraROA [cytosol] R-BRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119624 Methionine salvage pathway none Brassica rapa A01p019220.1_BraROA R-BRA-9025712-4 A01p019220.1_BraROA [cytosol] R-BRA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9025754 Mugineic acid biosynthesis none Brassica rapa A01p019540.1_BraROA R-BRA-1123745-4 A01p019540.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119260 Cardiolipin biosynthesis none Brassica rapa A01p019540.1_BraROA R-BRA-1123745-4 A01p019540.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119402 Phospholipid biosynthesis I none Brassica rapa A01p021920.1_BraROA R-BRA-9658589-2 A01p021920.1_BraROA [endoplasmic reticulum lumen] R-BRA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119502 Allantoin degradation none Brassica rapa A01p022290.1_BraROA R-BRA-1125340 A01p022290.1_BraROA [plastid stroma] R-BRA-1119274 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119274 Monoterpene biosynthesis none Brassica rapa A01p022290.1_BraROA R-BRA-1125340 A01p022290.1_BraROA [plastid stroma] R-BRA-1119593 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119593 Oleoresin monoterpene volatiles biosynthesis none Brassica rapa A01p022330.1_BraROA R-BRA-1129879 A01p022330.1_BraROA [cytosol] R-BRA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119436 Peptidoglycan biosynthesis I none Brassica rapa A01p022340.1_BraROA R-BRA-1127338 A01p022340.1_BraROA [mitochondrial inner membrane] R-BRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119402 Phospholipid biosynthesis I none Brassica rapa A01p022830.1_BraROA R-BRA-6787066-2 A01p022830.1_BraROA [nucleoplasm] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A01p023220.1_BraROA R-BRA-9681920 A01p023220.1_BraROA [cytosol] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A01p023320.1_BraROA R-BRA-1128431-2 A01p023320.1_BraROA [cytosol] R-BRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119316 Phenylpropanoid biosynthesis none Brassica rapa A01p023820.1_BraROA R-BRA-4723654-2 A01p023820.1_BraROA [plastid stroma] R-BRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119464 Methylerythritol phosphate pathway none Brassica rapa A01p023820.1_BraROA R-BRA-1130030-2 A01p023820.1_BraROA [cytosol] R-BRA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119594 Pyridoxal 5'-phosphate biosynthesis none Brassica rapa A01p023820.1_BraROA R-BRA-1130030-2 A01p023820.1_BraROA [cytosol] R-BRA-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119629 Thiamine biosynthesis none Brassica rapa A01p023880.1_BraROA R-BRA-1129136 A01p023880.1_BraROA [plastid stroma] R-BRA-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Brassica rapa A01p024690.1_BraROA R-BRA-1126794-2 A01p024690.1_BraROA [cytosol] R-BRA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119331 Cysteine biosynthesis I none Brassica rapa A01p025170.1_BraROA R-BRA-1128257-2 A01p025170.1_BraROA [plastid stroma] R-BRA-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119529 Sulfate activation for sulfonation none Brassica rapa A01p025440.1_BraROA R-BRA-1124190 A01p025440.1_BraROA [plastid stroma] R-BRA-1119412 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119412 Chlorophyll a biosynthesis I none Brassica rapa A01p025660.1_BraROA R-BRA-1127087-3 A01p025660.1_BraROA [cytosol] R-BRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119438 Secologanin and strictosidine biosynthesis none Brassica rapa A01p025670.1_BraROA R-BRA-1127087-2 A01p025670.1_BraROA [cytosol] R-BRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119438 Secologanin and strictosidine biosynthesis none Brassica rapa A01p026910.1_BraROA R-BRA-9640671-2 A01p026910.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A01p026910.1_BraROA R-BRA-9640671-2 A01p026910.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A01p026940.1_BraROA R-BRA-1123819 A01p026940.1_BraROA [plastid stroma] R-BRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119464 Methylerythritol phosphate pathway none Brassica rapa A01p027270.1_BraROA R-BRA-1123757 A01p027270.1_BraROA [cytosol] R-BRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119460 Isoleucine biosynthesis from threonine none Brassica rapa A01p027270.1_BraROA R-BRA-1123757 A01p027270.1_BraROA [cytosol] R-BRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119473 Cytokinins-O-glucoside biosynthesis none Brassica rapa A01p027270.1_BraROA R-BRA-1123757 A01p027270.1_BraROA [cytosol] R-BRA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119496 Pantothenate biosynthesis I none Brassica rapa A01p027270.1_BraROA R-BRA-1123757 A01p027270.1_BraROA [cytosol] R-BRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119540 Leucine biosynthesis none Brassica rapa A01p027270.1_BraROA R-BRA-1123757 A01p027270.1_BraROA [cytosol] R-BRA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119544 Pantothenate biosynthesis II none Brassica rapa A01p028100.1_BraROA R-BRA-9025471-2 A01p028100.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119325 Sphingolipid metabolism none Brassica rapa A01p028100.1_BraROA R-BRA-1127934-2 A01p028100.1_BraROA [cytosol] R-BRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119610 Biotin biosynthesis II none Brassica rapa A01p028130.1_BraROA R-BRA-9640708 phospho-A01p028130.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A01p028130.1_BraROA R-BRA-9640770 A01p028130.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A01p028130.1_BraROA R-BRA-9640708 phospho-A01p028130.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A01p028960.1_BraROA R-BRA-6788036-3 A01p028960.1_BraROA [cytosol] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A01p028960.1_BraROA R-BRA-1126611-3 A01p028960.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A01p028970.1_BraROA R-BRA-6788036 A01p028970.1_BraROA [cytosol] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A01p028970.1_BraROA R-BRA-1126611 A01p028970.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A01p030120.1_BraROA R-BRA-9611510-2 phospho-phosphorylated-SPL11 [plasma membrane] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A01p030120.1_BraROA R-BRA-9611544-2 SPL11 [nucleoplasm] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A01p030120.1_BraROA R-BRA-9611440-2 phospho-phosphorylated-SPL11 [nucleoplasm] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A01p030200.1_BraROA R-BRA-1122541-4 A01p030200.1_BraROA [cytosol] R-BRA-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Brassica rapa A01p030200.1_BraROA R-BRA-1122541-4 A01p030200.1_BraROA [cytosol] R-BRA-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Brassica rapa A01p035550.1_BraROA R-BRA-5632268 A01p035550.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A01p037700.1_BraROA R-BRA-1128263 A01p037700.1_BraROA [plastid stroma] R-BRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119509 Histidine biosynthesis I none Brassica rapa A01p037760.1_BraROA R-BRA-1128980 A01p037760.1_BraROA [cytosol] R-BRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119586 Cyanate degradation none Brassica rapa A01p038290.1_BraROA R-BRA-1125638 A01p038290.1_BraROA [cytosol] R-BRA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119516 Trehalose biosynthesis I none Brassica rapa A01p039540.1_BraROA R-BRA-1122295 A01p039540.1_BraROA [cytosol] R-BRA-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119353 Linear furanocoumarin biosynthesis none Brassica rapa A01p039810.1_BraROA R-BRA-1124234 A01p039810.1_BraROA [cytosol] R-BRA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119436 Peptidoglycan biosynthesis I none Brassica rapa A01p041350.1_BraROA R-BRA-9918175-2 A01p041350.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A01p041680.1_BraROA R-BRA-1127733 A01p041680.1_BraROA [cytosol] R-BRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119460 Isoleucine biosynthesis from threonine none Brassica rapa A01p041680.1_BraROA R-BRA-1127733 A01p041680.1_BraROA [cytosol] R-BRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119600 Valine biosynthesis none Brassica rapa A01p042080.1_BraROA R-BRA-1129029-4 A01p042080.1_BraROA [cytosol] R-BRA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119501 S-adenosyl-L-methionine cycle none Brassica rapa A01p042790.1_BraROA R-BRA-8879002-3 A01p042790.1_BraROA [nucleoplasm] R-BRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8879007 Response to cold temperature none Brassica rapa A01p042980.1_BraROA R-BRA-5225766-3 A01p042980.1_BraROA [nucleoplasm] R-BRA-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5225756 Ethylene mediated signaling none Brassica rapa A01p044040.1_BraROA R-BRA-1125584 A01p044040.1_BraROA [plastid stroma] R-BRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119509 Histidine biosynthesis I none Brassica rapa A01p044290.1_BraROA R-BRA-9026148-2 A01p044290.1_BraROA [mitochondrion] R-BRA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119458 Glutamate degradation none Brassica rapa A01p044290.1_BraROA R-BRA-1130288-2 A01p044290.1_BraROA [cytosol] R-BRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119610 Biotin biosynthesis II none Brassica rapa A01p045180.1_BraROA R-BRA-9675354-4 A01p045180.1_BraROA [nucleoplasm] R-BRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675508 Root elongation none Brassica rapa A01p045180.1_BraROA R-BRA-9675335-4 A01p045180.1_BraROA [mitochondrial matrix] R-BRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675508 Root elongation none Brassica rapa A01p045250.1_BraROA R-BRA-1126034 A01p045250.1_BraROA [cytosol] R-BRA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119534 Pyridoxal 5'-phosphate salvage pathway none Brassica rapa A01p045250.1_BraROA R-BRA-1126034 A01p045250.1_BraROA [cytosol] R-BRA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119594 Pyridoxal 5'-phosphate biosynthesis none Brassica rapa A01p045970.1_BraROA R-BRA-1128906 A01p045970.1_BraROA [cytosol] R-BRA-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119444 Canavanine biosynthesis none Brassica rapa A01p046270.1_BraROA R-BRA-5632121-4 A01p046270.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A01p046620.1_BraROA R-BRA-9639111-2 A01p046620.1_BraROA [plasma membrane] R-BRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639136 Response to Aluminum stress none Brassica rapa A01p047300.1_BraROA R-BRA-1129208-3 A01p047300.1_BraROA [chloroplast envelope] R-BRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119402 Phospholipid biosynthesis I none Brassica rapa A01p048080.1_BraROA R-BRA-1124285 A01p048080.1_BraROA [cytosol] R-BRA-1119284 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119284 Coumarin biosynthesis (via 2-coumarate) none Brassica rapa A01p048100.1_BraROA R-BRA-1124285-2 A01p048100.1_BraROA [cytosol] R-BRA-1119284 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119284 Coumarin biosynthesis (via 2-coumarate) none Brassica rapa A01p048280.1_BraROA R-BRA-1125564-3 A01p048280.1_BraROA [cytosol] R-BRA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119291 Nitrate assimilation none Brassica rapa A01p048280.1_BraROA R-BRA-1125564-3 A01p048280.1_BraROA [cytosol] R-BRA-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119293 Glutamine biosynthesis I none Brassica rapa A01p048280.1_BraROA R-BRA-1125564-3 A01p048280.1_BraROA [cytosol] R-BRA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119443 Ammonia assimilation cycle none Brassica rapa A01p048290.1_BraROA R-BRA-9658702 A01p048290.1_BraROA [plastid stroma] R-BRA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119297 Beta-alanine biosynthesis III none Brassica rapa A01p048480.1_BraROA R-BRA-1129914-3 A01p048480.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A01p049260.1_BraROA R-BRA-5632301-4 A01p049260.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A01p049260.1_BraROA R-BRA-5632301-4 A01p049260.1_BraROA [nucleoplasm] R-BRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5654828 Strigolactone signaling none Brassica rapa A01p049260.1_BraROA R-BRA-5632301-4 A01p049260.1_BraROA [nucleoplasm] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A01p049520.1_BraROA R-BRA-1129390 A01p049520.1_BraROA [mitochondrion] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A01p049650.1_BraROA R-BRA-1125997-2 A01p049650.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A01p049650.1_BraROA R-BRA-1125997-2 A01p049650.1_BraROA [nucleoplasm] R-BRA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030680 Crown root development none Brassica rapa A01p049900.1_BraROA R-BRA-5654750-2 A01p049900.1_BraROA [cytosol] R-BRA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119393 Asparagine degradation I none Brassica rapa A01p050260.1_BraROA R-BRA-1125906-3 A01p050260.1_BraROA [cytosol] R-BRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119276 Choline biosynthesis III none Brassica rapa A01p050750.1_BraROA R-BRA-9035727-3 A01p050750.1_BraROA [cytosol] R-BRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9035605 Regulation of seed size none Brassica rapa A01p050750.1_BraROA R-BRA-9035692-3 A01p050750.1_BraROA [nucleoplasm] R-BRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9035605 Regulation of seed size none Brassica rapa A01p051130.1_BraROA R-BRA-9930197 MPK8 [nucleoplasm] R-BRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9766881 TF network involved in salinity response none Brassica rapa A01p051350.1_BraROA R-BRA-8987473-3 A01p051350.1_BraROA [peroxisomal matrix] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A01p051350.1_BraROA R-BRA-1124984-3 A01p051350.1_BraROA [cytosol] R-BRA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119596 Glutamate biosynthesis I none Brassica rapa A01p051360.1_BraROA R-BRA-8987473-4 A01p051360.1_BraROA [peroxisomal matrix] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A01p051360.1_BraROA R-BRA-1124984-4 A01p051360.1_BraROA [cytosol] R-BRA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119596 Glutamate biosynthesis I none Brassica rapa A01p051600.1_BraROA R-BRA-1130222-2 A01p051600.1_BraROA [cytosol] R-BRA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119596 Glutamate biosynthesis I none Brassica rapa A01p051890.1_BraROA R-BRA-5679401-4 A01p051890.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A01p053260.1_BraROA R-BRA-9916302 A01p053260.1_BraROA [nucleoplasm] R-BRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9916190 Root angle formation: elongation and curvature response none Brassica rapa A01p053450.1_BraROA R-BRA-8986767-2 A01p053450.1_BraROA [plastid] R-BRA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8986768 Anther and pollen development none Brassica rapa A01p053590.1_BraROA R-BRA-1127625 A01p053590.1_BraROA [cytosol] R-BRA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119265 Tetrahydrofolate biosynthesis I none Brassica rapa A01p053590.1_BraROA R-BRA-1127625 A01p053590.1_BraROA [cytosol] R-BRA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119523 Tetrahydrofolate biosynthesis II none Brassica rapa A01p053860.1_BraROA R-BRA-4415078 A01p053860.1_BraROA [cytosol] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A01p054160.1_BraROA R-BRA-1129811-2 A01p054160.1_BraROA [mitochondrion] R-BRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119403 Removal of superoxide radicals none Brassica rapa A01p054640.1_BraROA R-BRA-1125631-2 A01p054640.1_BraROA [cytosol] R-BRA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119321 Glycerol degradation I none Brassica rapa A01p054830.1_BraROA R-BRA-1127031-2 A01p054830.1_BraROA [cytosol] R-BRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119460 Isoleucine biosynthesis from threonine none Brassica rapa A01p054980.1_BraROA R-BRA-1127140 A01p054980.1_BraROA [cytosol] R-BRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119403 Removal of superoxide radicals none Brassica rapa A01p055240.1_BraROA R-BRA-8986695-2 A01p055240.1_BraROA [endoplasmic reticulum membrane] R-BRA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8986768 Anther and pollen development none Brassica rapa A01p055350.1_BraROA R-BRA-9025294-3 A01p055350.1_BraROA [cytosol] R-BRA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119267 Phenylalanine degradation III none Brassica rapa A01p055350.1_BraROA R-BRA-1124944-2 A01p055350.1_BraROA [plastid stroma] R-BRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119460 Isoleucine biosynthesis from threonine none Brassica rapa A01p055350.1_BraROA R-BRA-1127774-2 A01p055350.1_BraROA [cytosol] R-BRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119460 Isoleucine biosynthesis from threonine none Brassica rapa A01p055350.1_BraROA R-BRA-1124944-2 A01p055350.1_BraROA [plastid stroma] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A01p055350.1_BraROA R-BRA-1127774-2 A01p055350.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A01p055350.1_BraROA R-BRA-1124944-2 A01p055350.1_BraROA [plastid stroma] R-BRA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119502 Allantoin degradation none Brassica rapa A01p055350.1_BraROA R-BRA-1124944-2 A01p055350.1_BraROA [plastid stroma] R-BRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119600 Valine biosynthesis none Brassica rapa A01p055350.1_BraROA R-BRA-1127774-2 A01p055350.1_BraROA [cytosol] R-BRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119600 Valine biosynthesis none Brassica rapa A01p055580.1_BraROA R-BRA-9639088-2 A01p055580.1_BraROA [plasma membrane] R-BRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639136 Response to Aluminum stress none Brassica rapa A01p055880.1_BraROA R-BRA-5655007 A01p055880.1_BraROA [Golgi lumen] R-BRA-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5655010 Xylogalacturonan biosynthesis none Brassica rapa A01p056530.1_BraROA R-BRA-1129507-2 A01p056530.1_BraROA [cytosol] R-BRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119452 Galactose degradation II none Brassica rapa A01p056670.1_BraROA R-BRA-1127695 A01p056670.1_BraROA [plastid stroma] R-BRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119430 Chorismate biosynthesis none Brassica rapa A01p057620.1_BraROA R-BRA-1127705 A01p057620.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A01p057640.1_BraROA R-BRA-1122892-6 A01p057640.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A01p057640.1_BraROA R-BRA-1122892-6 A01p057640.1_BraROA [nucleoplasm] R-BRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030557 Lateral root initiation none Brassica rapa A01p057640.1_BraROA R-BRA-1122892-6 A01p057640.1_BraROA [nucleoplasm] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A01p057720.1_BraROA R-BRA-6787113 A01p057720.1_BraROA [nucleoplasm] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A01p057770.1_BraROA R-BRA-5225766-4 A01p057770.1_BraROA [nucleoplasm] R-BRA-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5225756 Ethylene mediated signaling none Brassica rapa A01p057910.1_BraROA R-BRA-1122785-3 A01p057910.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A01p057910.1_BraROA R-BRA-1126726-3 A01p057910.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A01p057910.1_BraROA R-BRA-1122785-3 A01p057910.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A01p057910.1_BraROA R-BRA-1126726-3 A01p057910.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A01p057910.1_BraROA R-BRA-1122785-3 A01p057910.1_BraROA [cytosol] R-BRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119570 Cytosolic glycolysis none Brassica rapa A01p058360.1_BraROA R-BRA-9924413-4 WOX6 [nucleoplasm] R-BRA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924451 Shoot (tiller) formation and regulation of tiller angle none Brassica rapa A01p058930.1_BraROA R-BRA-1129816-2 A01p058930.1_BraROA [plastid stroma] R-BRA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119367 Polyisoprenoid biosynthesis none Brassica rapa A01p058930.1_BraROA R-BRA-1129816-2 A01p058930.1_BraROA [plastid stroma] R-BRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119615 Mevalonate pathway none Brassica rapa A01p058960.1_BraROA R-BRA-1126830-2 A01p058960.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A01p059230.1_BraROA R-BRA-9681910-5 A01p059230.1_BraROA [Golgi membrane] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A01p059330.1_BraROA R-BRA-1126531-3 A01p059330.1_BraROA [cytosol] R-BRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119410 Ascorbate biosynthesis none Brassica rapa A01p059330.1_BraROA R-BRA-1126531-3 A01p059330.1_BraROA [cytosol] R-BRA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119628 GDP-mannose metabolism none Brassica rapa A01p059580.1_BraROA R-BRA-1130101 A01p059580.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A01p059700.1_BraROA R-BRA-4752546-2 A01p059700.1_BraROA [plastid stroma] R-BRA-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119498 Phylloquinone biosynthesis none Brassica rapa A01p059880.1_BraROA R-BRA-1130327 A01p059880.1_BraROA [cytosol] R-BRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119586 Cyanate degradation none Brassica rapa A02g500860.1_BraROA R-BRA-1130327-4 A02g500860.1_BraROA [cytosol] R-BRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119586 Cyanate degradation none Brassica rapa A02g501190.1_BraROA R-BRA-1125734-2 A02g501190.1_BraROA [cytosol] R-BRA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119281 Aspartate biosynthesis I none Brassica rapa A02g501190.1_BraROA R-BRA-5632000-2 A02g501190.1_BraROA [plastid stroma] R-BRA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119553 Asparagine biosynthesis none Brassica rapa A02g501320.1_BraROA R-BRA-1124249 A02g501320.1_BraROA [cytosol] R-BRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119428 GDP-D-rhamnose biosynthesis none Brassica rapa A02g501320.1_BraROA R-BRA-1124249 A02g501320.1_BraROA [cytosol] R-BRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brassica rapa A02g502740.1_BraROA R-BRA-9675272-2 A02g502740.1_BraROA [plasma membrane] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A02g502810.1_BraROA R-BRA-1122974-7 A02g502810.1_BraROA [mitochondrial matrix] R-BRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119479 Valine degradation none Brassica rapa A02g504760.1_BraROA R-BRA-1130304-2 A02g504760.1_BraROA [cytosol] R-BRA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119291 Nitrate assimilation none Brassica rapa A02g506390.1_BraROA R-BRA-9639810 A02g506390.1_BraROA [cell wall] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A02g506890.1_BraROA R-BRA-1128328 A02g506890.1_BraROA [cytosol] R-BRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119615 Mevalonate pathway none Brassica rapa A02g509130.1_BraROA R-BRA-6788234-4 A02g509130.1_BraROA [cytosol] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A02g509130.1_BraROA R-BRA-1124041-4 A02g509130.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A02g509350.1_BraROA R-BRA-1124939 A02g509350.1_BraROA [cytosol] R-BRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119540 Leucine biosynthesis none Brassica rapa A02g512050.1_BraROA R-BRA-9035785-3 A02g512050.1_BraROA [nucleoplasm] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A02g512140.1_BraROA R-BRA-1127597 A02g512140.1_BraROA [cytosol] R-BRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119615 Mevalonate pathway none Brassica rapa A02p000290.1_BraROA R-BRA-9025294 A02p000290.1_BraROA [cytosol] R-BRA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119267 Phenylalanine degradation III none Brassica rapa A02p000290.1_BraROA R-BRA-1124944 A02p000290.1_BraROA [plastid stroma] R-BRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119460 Isoleucine biosynthesis from threonine none Brassica rapa A02p000290.1_BraROA R-BRA-1127774 A02p000290.1_BraROA [cytosol] R-BRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119460 Isoleucine biosynthesis from threonine none Brassica rapa A02p000290.1_BraROA R-BRA-1124944 A02p000290.1_BraROA [plastid stroma] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A02p000290.1_BraROA R-BRA-1127774 A02p000290.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A02p000290.1_BraROA R-BRA-1124944 A02p000290.1_BraROA [plastid stroma] R-BRA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119502 Allantoin degradation none Brassica rapa A02p000290.1_BraROA R-BRA-1124944 A02p000290.1_BraROA [plastid stroma] R-BRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119600 Valine biosynthesis none Brassica rapa A02p000290.1_BraROA R-BRA-1127774 A02p000290.1_BraROA [cytosol] R-BRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119600 Valine biosynthesis none Brassica rapa A02p000900.1_BraROA R-BRA-1129851 A02p000900.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A02p000900.1_BraROA R-BRA-1129851 A02p000900.1_BraROA [mitochondrial matrix] R-BRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119540 Leucine biosynthesis none Brassica rapa A02p001260.1_BraROA R-BRA-9608694-4 A02p001260.1_BraROA [cytosol] R-BRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928831 Severe drought none Brassica rapa A02p001260.1_BraROA R-BRA-9928774-4 A02p001260.1_BraROA [nucleoplasm] R-BRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928831 Severe drought none Brassica rapa A02p001820.1_BraROA R-BRA-1123087-2 A02p001820.1_BraROA [plasma membrane] R-BRA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119314 Cellulose biosynthesis none Brassica rapa A02p002030.1_BraROA R-BRA-1129723 A02p002030.1_BraROA [chloroplast] R-BRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119494 Tryptophan biosynthesis none Brassica rapa A02p002270.1_BraROA R-BRA-9608693-2 A02p002270.1_BraROA [cytosol] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A02p002500.1_BraROA R-BRA-6788172-4 A02p002500.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A02p002630.1_BraROA R-BRA-9930242-2 A02p002630.1_BraROA [nucleoplasm] R-BRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9766881 TF network involved in salinity response none Brassica rapa A02p003020.1_BraROA R-BRA-4827041-3 A02p003020.1_BraROA [plastid stroma] R-BRA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-4827054 Tetrapyrrole biosynthesis I none Brassica rapa A02p003030.1_BraROA R-BRA-1125237-2 A02p003030.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A02p003890.1_BraROA R-BRA-1129964-5 A02p003890.1_BraROA [cytosol] R-BRA-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119378 Myo-inositol biosynthesis none Brassica rapa A02p003890.1_BraROA R-BRA-1129964-5 A02p003890.1_BraROA [cytosol] R-BRA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119434 Phytic acid biosynthesis (lipid-independent) none Brassica rapa A02p004000.1_BraROA R-BRA-5632192-3 A02p004000.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A02p004460.1_BraROA R-BRA-8933766 A02p004460.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A02p004470.1_BraROA R-BRA-1126875-3 A02p004470.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A02p005340.1_BraROA R-BRA-1126714-2 A02p005340.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A02p005340.1_BraROA R-BRA-1126714-2 A02p005340.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A02p005340.1_BraROA R-BRA-1126714-2 A02p005340.1_BraROA [cytosol] R-BRA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119295 Homoserine biosynthesis none Brassica rapa A02p005340.1_BraROA R-BRA-5606484-2 A02p005340.1_BraROA [plastid stroma] R-BRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119419 Lysine biosynthesis VI none Brassica rapa A02p006360.1_BraROA R-BRA-1126373 A02p006360.1_BraROA [cytosol] R-BRA-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Brassica rapa A02p006590.1_BraROA R-BRA-9916124 OsPRX95 [extracellular region] R-BRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119403 Removal of superoxide radicals none Brassica rapa A02p006590.1_BraROA R-BRA-9916124 OsPRX95 [extracellular region] R-BRA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9607185 Generation of superoxide radicals none Brassica rapa A02p006720.1_BraROA R-BRA-9681886-4 A02p006720.1_BraROA [cytosol] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A02p006850.1_BraROA R-BRA-9681910-4 A02p006850.1_BraROA [Golgi membrane] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A02p006920.1_BraROA R-BRA-2960790 A02p006920.1_BraROA [cytosol] R-BRA-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119386 UDP-N-acetylgalactosamine biosynthesis none Brassica rapa A02p006920.1_BraROA R-BRA-2960790 A02p006920.1_BraROA [cytosol] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A02p006970.1_BraROA R-BRA-8934168-3 A02p006970.1_BraROA [nucleoplasm] R-BRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934036 Long day regulated expression of florigens none Brassica rapa A02p006970.1_BraROA R-BRA-8934168-3 A02p006970.1_BraROA [nucleoplasm] R-BRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934108 Short day regulated expression of florigens none Brassica rapa A02p006970.1_BraROA R-BRA-9920270-3 A02p006970.1_BraROA [nucleoplasm] R-BRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934108 Short day regulated expression of florigens none Brassica rapa A02p006970.1_BraROA R-BRA-8934168-3 A02p006970.1_BraROA [nucleoplasm] R-BRA-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928946 Drought escape (DE) via ABA-independent pathway none Brassica rapa A02p007070.1_BraROA R-BRA-1127467 A02p007070.1_BraROA [cytosol] R-BRA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119456 Brassinosteroid biosynthesis II none Brassica rapa A02p007200.1_BraROA R-BRA-1127455 A02p007200.1_BraROA [cytosol] R-BRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119460 Isoleucine biosynthesis from threonine none Brassica rapa A02p007200.1_BraROA R-BRA-1127455 A02p007200.1_BraROA [cytosol] R-BRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119600 Valine biosynthesis none Brassica rapa A02p007740.1_BraROA R-BRA-1124861-2 A02p007740.1_BraROA [plastid stroma] R-BRA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119449 Carotenoid biosynthesis none Brassica rapa A02p007970.1_BraROA R-BRA-9918201 A02p007970.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A02p008200.1_BraROA R-BRA-9924413-2 WOX6 [nucleoplasm] R-BRA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924451 Shoot (tiller) formation and regulation of tiller angle none Brassica rapa A02p008300.1_BraROA R-BRA-1125151-3 A02p008300.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A02p008300.1_BraROA R-BRA-1125151-3 A02p008300.1_BraROA [cytosol] R-BRA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119501 S-adenosyl-L-methionine cycle none Brassica rapa A02p008390.1_BraROA R-BRA-1126238-2 A02p008390.1_BraROA [chloroplast] R-BRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119494 Tryptophan biosynthesis none Brassica rapa A02p009180.1_BraROA R-BRA-1122398-2 A02p009180.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A02p009320.1_BraROA R-BRA-9611465-2 A02p009320.1_BraROA [nucleoplasm] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A02p009320.1_BraROA R-BRA-9611445-2 A02p009320.1_BraROA [nucleoplasm] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A02p009990.1_BraROA R-BRA-1127574 A02p009990.1_BraROA [cytosol] R-BRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119465 Sucrose biosynthesis none Brassica rapa A02p010290.1_BraROA R-BRA-5608125-2 A02p010290.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A02p010460.1_BraROA R-BRA-1250418 A02p010460.1_BraROA [cytosol] R-BRA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119374 Abscisic acid biosynthesis none Brassica rapa A02p010460.1_BraROA R-BRA-1129637 A02p010460.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A02p010770.1_BraROA R-BRA-9675803 A02p010770.1_BraROA [nucleoplasm] R-BRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675815 Leading strand synthesis none Brassica rapa A02p010860.1_BraROA R-BRA-1130348 A02p010860.1_BraROA [cytosol] R-BRA-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Brassica rapa A02p010970.1_BraROA R-BRA-1127161 A02p010970.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A02p011180.1_BraROA R-BRA-1129481 A02p011180.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A02p011650.1_BraROA R-BRA-9618056-3 A02p011650.1_BraROA [plasma membrane] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A02p012110.1_BraROA R-BRA-9639874-2 A02p012110.1_BraROA [plasma membrane] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A02p012310.1_BraROA R-BRA-9826691-3 A02p012310.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A02p012360.1_BraROA R-BRA-1126172 A02p012360.1_BraROA [cytosol] R-BRA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119379 Flavin biosynthesis none Brassica rapa A02p012520.1_BraROA R-BRA-1123860-4 A02p012520.1_BraROA [cytosol] R-BRA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119292 Cytokinins 7-N-glucoside biosynthesis none Brassica rapa A02p012520.1_BraROA R-BRA-1123860-4 A02p012520.1_BraROA [cytosol] R-BRA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119375 Cytokinins 9-N-glucoside biosynthesis none Brassica rapa A02p012520.1_BraROA R-BRA-1123860-4 A02p012520.1_BraROA [cytosol] R-BRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119473 Cytokinins-O-glucoside biosynthesis none Brassica rapa A02p012710.1_BraROA R-BRA-1126799-3 A02p012710.1_BraROA [cytosol] R-BRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119428 GDP-D-rhamnose biosynthesis none Brassica rapa A02p012710.1_BraROA R-BRA-1126799-3 A02p012710.1_BraROA [cytosol] R-BRA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119563 UDP-D-xylose biosynthesis none Brassica rapa A02p012710.1_BraROA R-BRA-1126799-3 A02p012710.1_BraROA [cytosol] R-BRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brassica rapa A02p013370.1_BraROA R-BRA-9025230 A02p013370.1_BraROA [peroxisomal matrix] R-BRA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119407 Ureide biosynthesis none Brassica rapa A02p014190.1_BraROA R-BRA-9920292-6 A02p014190.1_BraROA [nucleoplasm] R-BRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934108 Short day regulated expression of florigens none Brassica rapa A02p014420.1_BraROA R-BRA-8858085-3 A02p014420.1_BraROA [plasma membrane] R-BRA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8858053 Polar auxin transport none Brassica rapa A02p014420.1_BraROA R-BRA-8858085-3 A02p014420.1_BraROA [plasma membrane] R-BRA-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924494 Gravity sensing and statolith sedimentation none Brassica rapa A02p014420.1_BraROA R-BRA-9928298-3 PIN2 [endosome] R-BRA-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924494 Gravity sensing and statolith sedimentation none Brassica rapa A02p014780.1_BraROA R-BRA-1127523 A02p014780.1_BraROA [cytosol] R-BRA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Brassica rapa A02p015200.1_BraROA R-BRA-9025712-2 A02p015200.1_BraROA [cytosol] R-BRA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9025754 Mugineic acid biosynthesis none Brassica rapa A02p015670.1_BraROA R-BRA-9675426-3 A02p015670.1_BraROA [nucleoplasm] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A02p015830.1_BraROA R-BRA-1128606 A02p015830.1_BraROA [mitochondrial matrix] R-BRA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119365 Lysine degradation II none Brassica rapa A02p015830.1_BraROA R-BRA-1173244 A02p015830.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A02p015900.1_BraROA R-BRA-1126714-4 A02p015900.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A02p015900.1_BraROA R-BRA-1126714-4 A02p015900.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A02p015900.1_BraROA R-BRA-1126714-4 A02p015900.1_BraROA [cytosol] R-BRA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119295 Homoserine biosynthesis none Brassica rapa A02p015900.1_BraROA R-BRA-5606484-4 A02p015900.1_BraROA [plastid stroma] R-BRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119419 Lysine biosynthesis VI none Brassica rapa A02p015960.1_BraROA R-BRA-9918175-4 A02p015960.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A02p016630.1_BraROA R-BRA-1127734 A02p016630.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A02p016700.1_BraROA R-BRA-1129547-16 A02p016700.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A02p016700.1_BraROA R-BRA-1129547-16 A02p016700.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A02p016700.1_BraROA R-BRA-1129547-16 A02p016700.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A02p017430.1_BraROA R-BRA-1123059 A02p017430.1_BraROA [cytosol] R-BRA-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119317 Spermine biosynthesis none Brassica rapa A02p017430.1_BraROA R-BRA-1123059 A02p017430.1_BraROA [cytosol] R-BRA-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119343 Spermidine biosynthesis none Brassica rapa A02p018270.1_BraROA R-BRA-9826696 A02p018270.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A02p018650.1_BraROA R-BRA-1125569-2 A02p018650.1_BraROA [cytosol] R-BRA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119516 Trehalose biosynthesis I none Brassica rapa A02p018750.1_BraROA R-BRA-9608930 A02p018750.1_BraROA [nucleoplasm] R-BRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934036 Long day regulated expression of florigens none Brassica rapa A02p018860.1_BraROA R-BRA-1129769-2 A02p018860.1_BraROA [cytosol] R-BRA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119332 Jasmonic acid biosynthesis none Brassica rapa A02p018860.1_BraROA R-BRA-1129769-2 A02p018860.1_BraROA [cytosol] R-BRA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119618 13-LOX and 13-HPL pathway none Brassica rapa A02p019260.1_BraROA R-BRA-1124935 A02p019260.1_BraROA [cytosol] R-BRA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119349 S-methylmethionine cycle none Brassica rapa A02p019270.1_BraROA R-BRA-3321260 A02p019270.1_BraROA [chloroplast stroma] R-BRA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119287 Vitamin E biosynthesis none Brassica rapa A02p019680.1_BraROA R-BRA-9675272 A02p019680.1_BraROA [plasma membrane] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A02p020660.1_BraROA R-BRA-1126531 A02p020660.1_BraROA [cytosol] R-BRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119410 Ascorbate biosynthesis none Brassica rapa A02p020660.1_BraROA R-BRA-1126531 A02p020660.1_BraROA [cytosol] R-BRA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119628 GDP-mannose metabolism none Brassica rapa A02p020690.1_BraROA R-BRA-8987531-5 A02p020690.1_BraROA [chloroplast] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A02p020690.1_BraROA R-BRA-1125951-5 A02p020690.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A02p020720.1_BraROA R-BRA-8987531-6 A02p020720.1_BraROA [chloroplast] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A02p020720.1_BraROA R-BRA-1125951-6 A02p020720.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A02p020990.1_BraROA R-BRA-9646043 A02p020990.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A02p020990.1_BraROA R-BRA-9646043 A02p020990.1_BraROA [nucleoplasm] R-BRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675782 Maturation none Brassica rapa A02p020990.1_BraROA R-BRA-9646043 A02p020990.1_BraROA [nucleoplasm] R-BRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675815 Leading strand synthesis none Brassica rapa A02p020990.1_BraROA R-BRA-9646043 A02p020990.1_BraROA [nucleoplasm] R-BRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675824 DNA replication Initiation none Brassica rapa A02p020990.1_BraROA R-BRA-9646043 A02p020990.1_BraROA [nucleoplasm] R-BRA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675885 Lagging strand synthesis none Brassica rapa A02p023310.1_BraROA R-BRA-5633270 A02p023310.1_BraROA [cytosol] R-BRA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119495 Citrulline biosynthesis none Brassica rapa A02p023400.1_BraROA R-BRA-9025463-2 A02p023400.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119325 Sphingolipid metabolism none Brassica rapa A02p023880.1_BraROA R-BRA-9640729-2 A02p023880.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A02p023880.1_BraROA R-BRA-9640729-2 A02p023880.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A02p023950.1_BraROA R-BRA-1125638-3 A02p023950.1_BraROA [cytosol] R-BRA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119516 Trehalose biosynthesis I none Brassica rapa A02p024020.1_BraROA R-BRA-1130327-5 A02p024020.1_BraROA [cytosol] R-BRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119586 Cyanate degradation none Brassica rapa A02p024180.1_BraROA R-BRA-1126549-2 A02p024180.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A02p024210.1_BraROA R-BRA-1130162 A02p024210.1_BraROA [chloroplast] R-BRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119494 Tryptophan biosynthesis none Brassica rapa A02p025180.1_BraROA R-BRA-1125447-2 A02p025180.1_BraROA [plastid stroma] R-BRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119509 Histidine biosynthesis I none Brassica rapa A02p025540.1_BraROA R-BRA-9826680-7 A02p025540.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A02p025830.1_BraROA R-BRA-1123433 A02p025830.1_BraROA [cytosol] R-BRA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119332 Jasmonic acid biosynthesis none Brassica rapa A02p025830.1_BraROA R-BRA-1123433 A02p025830.1_BraROA [cytosol] R-BRA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119618 13-LOX and 13-HPL pathway none Brassica rapa A02p026010.1_BraROA R-BRA-1130059 A02p026010.1_BraROA [cytosol] R-BRA-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119262 Threonine biosynthesis from homoserine none Brassica rapa A02p026720.1_BraROA R-BRA-1122656 A02p026720.1_BraROA [endosome] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A02p026720.1_BraROA R-BRA-5679312 A02p026720.1_BraROA [plasma membrane] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A02p027350.1_BraROA R-BRA-5655070-3 A02p027350.1_BraROA [Golgi lumen] R-BRA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5655101 Xyloglucan biosynthesis none Brassica rapa A02p027410.1_BraROA R-BRA-1122261-2 A02p027410.1_BraROA [plastid stroma] R-BRA-1119602 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119602 Phytyl-PP biosynthesis none Brassica rapa A02p027410.1_BraROA R-BRA-1122261-2 A02p027410.1_BraROA [plastid stroma] R-BRA-1119605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119605 Chlorophyll a biosynthesis II none Brassica rapa A02p027590.1_BraROA R-BRA-6787276-2 A02p027590.1_BraROA [plastid stroma] R-BRA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119261 Salicylate biosynthesis none Brassica rapa A02p027590.1_BraROA R-BRA-6787950-2 A02p027590.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A02p027720.1_BraROA R-BRA-1129208-2 A02p027720.1_BraROA [chloroplast envelope] R-BRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119402 Phospholipid biosynthesis I none Brassica rapa A02p027870.1_BraROA R-BRA-1123717 A02p027870.1_BraROA [cytosol] R-BRA-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119395 Maackiain biosynthesis none Brassica rapa A02p027870.1_BraROA R-BRA-1123717 A02p027870.1_BraROA [cytosol] R-BRA-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119453 Medicarpin biosynthesis none Brassica rapa A02p028080.1_BraROA R-BRA-8868961-3 A02p028080.1_BraROA [plant-type vacuole membrane] R-BRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8868949 Intracellular auxin transport none Brassica rapa A02p028150.1_BraROA R-BRA-9826692-2 A02p028150.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A02p028970.1_BraROA R-BRA-1124496 A02p028970.1_BraROA [cytosol] R-BRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119615 Mevalonate pathway none Brassica rapa A02p029030.1_BraROA R-BRA-8868866 A02p029030.1_BraROA [endoplasmic reticulum membrane] R-BRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8868949 Intracellular auxin transport none Brassica rapa A02p029480.1_BraROA R-BRA-9930308 SNAC2 (OsNAC6) [nucleoplasm] R-BRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9766881 TF network involved in salinity response none Brassica rapa A02p029490.1_BraROA R-BRA-9675818 A02p029490.1_BraROA [nucleoplasm] R-BRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675815 Leading strand synthesis none Brassica rapa A02p030410.1_BraROA R-BRA-5221144-2 A02p030410.1_BraROA [plastid] R-BRA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119374 Abscisic acid biosynthesis none Brassica rapa A02p030510.1_BraROA R-BRA-1126560 A02p030510.1_BraROA [cytosol] R-BRA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119516 Trehalose biosynthesis I none Brassica rapa A02p030610.1_BraROA R-BRA-1123733-2 A02p030610.1_BraROA [cytosol] R-BRA-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119484 Folate polyglutamylation II none Brassica rapa A02p030630.1_BraROA R-BRA-5632315 A02p030630.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A02p030630.1_BraROA R-BRA-5632284 phospho-A02p030630.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A02p030630.1_BraROA R-BRA-5632342 phospho-A02p030630.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A02p030630.1_BraROA R-BRA-5632315 A02p030630.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A02p031280.1_BraROA R-BRA-1127527 A02p031280.1_BraROA [cytosol] R-BRA-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Brassica rapa A02p031310.1_BraROA R-BRA-1125920-2 A02p031310.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A02p031310.1_BraROA R-BRA-1125920-2 A02p031310.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A02p031340.1_BraROA R-BRA-5149657-2 A02p031340.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A02p031340.1_BraROA R-BRA-1129239-2 A02p031340.1_BraROA [cytosol] R-BRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119570 Cytosolic glycolysis none Brassica rapa A02p031570.1_BraROA R-BRA-6787933-4 A02p031570.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A02p031640.1_BraROA R-BRA-1128200-2 A02p031640.1_BraROA [cytosol] R-BRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119316 Phenylpropanoid biosynthesis none Brassica rapa A02p031820.1_BraROA R-BRA-5138505 A02p031820.1_BraROA [plastid stroma] R-BRA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119263 Arginine biosynthesis none Brassica rapa A02p031820.1_BraROA R-BRA-5138505 A02p031820.1_BraROA [plastid stroma] R-BRA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119539 Ornithine biosynthesis none Brassica rapa A02p031820.1_BraROA R-BRA-5138505 A02p031820.1_BraROA [plastid stroma] R-BRA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119622 Arginine biosynthesis II (acetyl cycle) none Brassica rapa A02p032080.1_BraROA R-BRA-1126860 A02p032080.1_BraROA [cytosol] R-BRA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119321 Glycerol degradation I none Brassica rapa A02p032280.1_BraROA R-BRA-9675849 A02p032280.1_BraROA [nucleoplasm] R-BRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675824 DNA replication Initiation none Brassica rapa A02p032600.1_BraROA R-BRA-3321260-2 A02p032600.1_BraROA [chloroplast stroma] R-BRA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119287 Vitamin E biosynthesis none Brassica rapa A02p032940.1_BraROA R-BRA-1127173-3 A02p032940.1_BraROA [cytosol] R-BRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119540 Leucine biosynthesis none Brassica rapa A02p033710.1_BraROA R-BRA-9639810-4 A02p033710.1_BraROA [cell wall] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A02p033870.1_BraROA R-BRA-8934084 A02p033870.1_BraROA [nucleoplasm] R-BRA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928995 Drought escape (DE) via ABA-dependent pathway none Brassica rapa A02p034010.1_BraROA R-BRA-1127173-7 A02p034010.1_BraROA [cytosol] R-BRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119540 Leucine biosynthesis none Brassica rapa A02p034110.1_BraROA R-BRA-5632341-2 A02p034110.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A02p034110.1_BraROA R-BRA-5632170-2 phospho-A02p034110.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A02p035910.1_BraROA R-BRA-1126615 A02p035910.1_BraROA [cytosol] R-BRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119437 Glutathione redox reactions I none Brassica rapa A02p036580.1_BraROA R-BRA-9618171-2 A02p036580.1_BraROA [plasma membrane] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A02p040260.1_BraROA R-BRA-9924407-2 EXPB5 [basolateral plasma membrane] R-BRA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924451 Shoot (tiller) formation and regulation of tiller angle none Brassica rapa A02p041160.1_BraROA R-BRA-9640786-2 A02p041160.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A02p041160.1_BraROA R-BRA-9640786-2 A02p041160.1_BraROA [nucleoplasm] R-BRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675824 DNA replication Initiation none Brassica rapa A02p041740.1_BraROA R-BRA-6788026-3 A02p041740.1_BraROA [cytosol] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A02p041970.1_BraROA R-BRA-1128857-3 A02p041970.1_BraROA [cytosol] R-BRA-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119609 Phaseic acid biosynthesis none Brassica rapa A02p043260.1_BraROA R-BRA-9640767 A02p043260.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A02p043260.1_BraROA R-BRA-9640767 A02p043260.1_BraROA [nucleoplasm] R-BRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675824 DNA replication Initiation none Brassica rapa A02p044320.1_BraROA R-BRA-1130181 A02p044320.1_BraROA [plastid stroma] R-BRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119430 Chorismate biosynthesis none Brassica rapa A02p044560.1_BraROA R-BRA-9612406-2 A02p044560.1_BraROA [mitochondrial matrix] R-BRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119612 Cysteine degradation none Brassica rapa A02p045370.1_BraROA R-BRA-1130006 A02p045370.1_BraROA [plastid stroma] R-BRA-1119569 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119569 Kievitone biosynthesis none Brassica rapa A02p045600.1_BraROA R-BRA-5149676 A02p045600.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A02p045850.1_BraROA R-BRA-1123525 A02p045850.1_BraROA [cytosol] R-BRA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119384 NAD biosynthesis I (from aspartate) none Brassica rapa A02p045890.1_BraROA R-BRA-1128126-4 A02p045890.1_BraROA [endosome] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A02p045890.1_BraROA R-BRA-5679348-4 A02p045890.1_BraROA [plasma membrane] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A02p046790.1_BraROA R-BRA-5679470-7 A02p046790.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A02p046870.1_BraROA R-BRA-5679402-8 A02p046870.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A02p046900.1_BraROA R-BRA-5679402-4 A02p046900.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A02p047360.1_BraROA R-BRA-1124242 A02p047360.1_BraROA [plastid stroma] R-BRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119464 Methylerythritol phosphate pathway none Brassica rapa A02p047440.1_BraROA R-BRA-9611864 A02p047440.1_BraROA [mitochondrial matrix] R-BRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119479 Valine degradation none Brassica rapa A02p047850.1_BraROA R-BRA-9645950-2 A02p047850.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A02p047850.1_BraROA R-BRA-9645950-2 A02p047850.1_BraROA [nucleoplasm] R-BRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675782 Maturation none Brassica rapa A02p047850.1_BraROA R-BRA-9645950-2 A02p047850.1_BraROA [nucleoplasm] R-BRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675815 Leading strand synthesis none Brassica rapa A02p047850.1_BraROA R-BRA-9645950-2 A02p047850.1_BraROA [nucleoplasm] R-BRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675824 DNA replication Initiation none Brassica rapa A02p047850.1_BraROA R-BRA-9645950-2 A02p047850.1_BraROA [nucleoplasm] R-BRA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675885 Lagging strand synthesis none Brassica rapa A02p048540.1_BraROA R-BRA-9025439 A02p048540.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119325 Sphingolipid metabolism none Brassica rapa A02p048620.1_BraROA R-BRA-8854445-2 A02p048620.1_BraROA [cytosol] R-BRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119276 Choline biosynthesis III none Brassica rapa A02p049110.1_BraROA R-BRA-5632129 A02p049110.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A02p049340.1_BraROA R-BRA-1130084-4 A02p049340.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A02p049550.1_BraROA R-BRA-1127873 A02p049550.1_BraROA [plastid stroma] R-BRA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119424 Plastid glycolysis none Brassica rapa A02p049550.1_BraROA R-BRA-1127873 A02p049550.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A02p049620.1_BraROA R-BRA-8879006-4 A02p049620.1_BraROA [nucleoplasm] R-BRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8879007 Response to cold temperature none Brassica rapa A02p049730.1_BraROA R-BRA-5608218-3 A02p049730.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A02p049730.1_BraROA R-BRA-5608218-3 A02p049730.1_BraROA [nucleoplasm] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A02p049730.1_BraROA R-BRA-9658968-3 A02p049730.1_BraROA [cytosol] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A02p050180.1_BraROA R-BRA-1124138-2 A02p050180.1_BraROA [cytosol] R-BRA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119394 Pantothenate and coenzyme A biosynthesis III none Brassica rapa A02p050430.1_BraROA R-BRA-1122601-3 A02p050430.1_BraROA [mitochondrial inner membrane] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A02p051580.1_BraROA R-BRA-1126095-3 A02p051580.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A02p051810.1_BraROA R-BRA-6787262-3 A02p051810.1_BraROA [nucleoplasm] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A02p052600.1_BraROA R-BRA-1126998-3 A02p052600.1_BraROA [cytosol] R-BRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119615 Mevalonate pathway none Brassica rapa A02p053660.1_BraROA R-BRA-9682506 A02p053660.1_BraROA [cytosol] R-BRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119410 Ascorbate biosynthesis none Brassica rapa A02p054290.1_BraROA R-BRA-5632301-3 A02p054290.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A02p054290.1_BraROA R-BRA-5632301-3 A02p054290.1_BraROA [nucleoplasm] R-BRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5654828 Strigolactone signaling none Brassica rapa A02p054290.1_BraROA R-BRA-5632301-3 A02p054290.1_BraROA [nucleoplasm] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A02p055110.1_BraROA R-BRA-1124809-2 A02p055110.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A02p056010.1_BraROA R-BRA-8933784 A02p056010.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A02p056740.1_BraROA R-BRA-1127173-5 A02p056740.1_BraROA [cytosol] R-BRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119540 Leucine biosynthesis none Brassica rapa A02p056750.1_BraROA R-BRA-5632199-2 A02p056750.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A02p056890.1_BraROA R-BRA-9826682 A02p056890.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A02p057460.1_BraROA R-BRA-5608102-2 A02p057460.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A02p057460.1_BraROA R-BRA-1123690-2 A02p057460.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A02p059660.1_BraROA R-BRA-9826680-6 A02p059660.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A02p059730.1_BraROA R-BRA-9640777-5 A02p059730.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A02p059730.1_BraROA R-BRA-9640777-5 A02p059730.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A02p059910.1_BraROA R-BRA-1123895-3 A02p059910.1_BraROA [cytosol] R-BRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119334 Ethylene biosynthesis from methionine none Brassica rapa A02p059910.1_BraROA R-BRA-1123895-3 A02p059910.1_BraROA [cytosol] R-BRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119624 Methionine salvage pathway none Brassica rapa A02p060280.1_BraROA R-BRA-9826620-5 HOX12/ OsGT1 [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A02p060280.1_BraROA R-BRA-9826620-5 HOX12/ OsGT1 [nucleoplasm] R-BRA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Brassica rapa A02p060470.1_BraROA R-BRA-9618057-3 A02p060470.1_BraROA [cytosol] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A02p060500.1_BraROA R-BRA-8868994-2 A02p060500.1_BraROA [endoplasmic reticulum membrane] R-BRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8868949 Intracellular auxin transport none Brassica rapa A03g500900.1_BraROA R-BRA-1126307 A03g500900.1_BraROA [cytosol] R-BRA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119370 Sterol biosynthesis none Brassica rapa A03g501030.1_BraROA R-BRA-9638999-2 A03g501030.1_BraROA [cytosol] R-BRA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119434 Phytic acid biosynthesis (lipid-independent) none Brassica rapa A03g502350.1_BraROA R-BRA-1124523 A03g502350.1_BraROA [cytosol] R-BRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119460 Isoleucine biosynthesis from threonine none Brassica rapa A03g502350.1_BraROA R-BRA-1124523 A03g502350.1_BraROA [cytosol] R-BRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119600 Valine biosynthesis none Brassica rapa A03g502640.1_BraROA R-BRA-8987483 A03g502640.1_BraROA [mitochondrial matrix] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A03g502800.1_BraROA R-BRA-9618056-7 A03g502800.1_BraROA [plasma membrane] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A03g504120.1_BraROA R-BRA-1129816 A03g504120.1_BraROA [plastid stroma] R-BRA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119367 Polyisoprenoid biosynthesis none Brassica rapa A03g504120.1_BraROA R-BRA-1129816 A03g504120.1_BraROA [plastid stroma] R-BRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119615 Mevalonate pathway none Brassica rapa A03g504170.1_BraROA R-BRA-1126860-3 A03g504170.1_BraROA [cytosol] R-BRA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119321 Glycerol degradation I none Brassica rapa A03g504480.1_BraROA R-BRA-9681895-2 A03g504480.1_BraROA [Golgi membrane] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A03g504490.1_BraROA R-BRA-1124234-2 A03g504490.1_BraROA [cytosol] R-BRA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119436 Peptidoglycan biosynthesis I none Brassica rapa A03g504730.1_BraROA R-BRA-8987548-3 A03g504730.1_BraROA [peroxisomal matrix] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A03g505180.1_BraROA R-BRA-5632121-3 A03g505180.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A03g505420.1_BraROA R-BRA-1127192 A03g505420.1_BraROA [cytosol] R-BRA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119291 Nitrate assimilation none Brassica rapa A03g505420.1_BraROA R-BRA-1127192 A03g505420.1_BraROA [cytosol] R-BRA-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119293 Glutamine biosynthesis I none Brassica rapa A03g505420.1_BraROA R-BRA-1127192 A03g505420.1_BraROA [cytosol] R-BRA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119443 Ammonia assimilation cycle none Brassica rapa A03g505450.1_BraROA R-BRA-1122892-4 A03g505450.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A03g505450.1_BraROA R-BRA-1122892-4 A03g505450.1_BraROA [nucleoplasm] R-BRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030557 Lateral root initiation none Brassica rapa A03g505450.1_BraROA R-BRA-1122892-4 A03g505450.1_BraROA [nucleoplasm] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A03g505700.1_BraROA R-BRA-4723654-3 A03g505700.1_BraROA [plastid stroma] R-BRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119464 Methylerythritol phosphate pathway none Brassica rapa A03g505700.1_BraROA R-BRA-1130030-3 A03g505700.1_BraROA [cytosol] R-BRA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119594 Pyridoxal 5'-phosphate biosynthesis none Brassica rapa A03g505700.1_BraROA R-BRA-1130030-3 A03g505700.1_BraROA [cytosol] R-BRA-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119629 Thiamine biosynthesis none Brassica rapa A03g507260.1_BraROA R-BRA-1122936-3 A03g507260.1_BraROA [cytosol] R-BRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119452 Galactose degradation II none Brassica rapa A03g507730.1_BraROA R-BRA-1128320 A03g507730.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A03g507730.1_BraROA R-BRA-1128320 A03g507730.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A03g510020.1_BraROA R-BRA-1125638-4 A03g510020.1_BraROA [cytosol] R-BRA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119516 Trehalose biosynthesis I none Brassica rapa A03p000300.1_BraROA R-BRA-6788042 A03p000300.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A03p000830.1_BraROA R-BRA-9640723-2 A03p000830.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A03p001180.1_BraROA R-BRA-1129851-3 A03p001180.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A03p001180.1_BraROA R-BRA-1129851-3 A03p001180.1_BraROA [mitochondrial matrix] R-BRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119540 Leucine biosynthesis none Brassica rapa A03p001240.1_BraROA R-BRA-9640698 A03p001240.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A03p001500.1_BraROA R-BRA-9608694-3 A03p001500.1_BraROA [cytosol] R-BRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928831 Severe drought none Brassica rapa A03p001500.1_BraROA R-BRA-9928774-3 A03p001500.1_BraROA [nucleoplasm] R-BRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928831 Severe drought none Brassica rapa A03p002040.1_BraROA R-BRA-9025712 A03p002040.1_BraROA [cytosol] R-BRA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9025754 Mugineic acid biosynthesis none Brassica rapa A03p002220.1_BraROA R-BRA-1123087 A03p002220.1_BraROA [plasma membrane] R-BRA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119314 Cellulose biosynthesis none Brassica rapa A03p002450.1_BraROA R-BRA-1123998-2 A03p002450.1_BraROA [chloroplast] R-BRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119494 Tryptophan biosynthesis none Brassica rapa A03p002490.1_BraROA R-BRA-9681885-3 A03p002490.1_BraROA [Golgi membrane] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A03p002500.1_BraROA R-BRA-1123470 A03p002500.1_BraROA [cytosol] R-BRA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119292 Cytokinins 7-N-glucoside biosynthesis none Brassica rapa A03p002500.1_BraROA R-BRA-1123470 A03p002500.1_BraROA [cytosol] R-BRA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119375 Cytokinins 9-N-glucoside biosynthesis none Brassica rapa A03p002500.1_BraROA R-BRA-1123470 A03p002500.1_BraROA [cytosol] R-BRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119473 Cytokinins-O-glucoside biosynthesis none Brassica rapa A03p002520.1_BraROA R-BRA-1125928-2 A03p002520.1_BraROA [cytosol] R-BRA-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119484 Folate polyglutamylation II none Brassica rapa A03p002520.1_BraROA R-BRA-1125928-2 A03p002520.1_BraROA [cytosol] R-BRA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119523 Tetrahydrofolate biosynthesis II none Brassica rapa A03p002520.1_BraROA R-BRA-1125928-2 A03p002520.1_BraROA [cytosol] R-BRA-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119617 Folate polyglutamylation I none Brassica rapa A03p003230.1_BraROA R-BRA-9930242 A03p003230.1_BraROA [nucleoplasm] R-BRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9766881 TF network involved in salinity response none Brassica rapa A03p003640.1_BraROA R-BRA-5632199 A03p003640.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A03p003720.1_BraROA R-BRA-1125533-2 A03p003720.1_BraROA [cytosol] R-BRA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119304 Putrescine biosynthesis II none Brassica rapa A03p003760.1_BraROA R-BRA-4827041 A03p003760.1_BraROA [plastid stroma] R-BRA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-4827054 Tetrapyrrole biosynthesis I none Brassica rapa A03p003780.1_BraROA R-BRA-1125237 A03p003780.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A03p003820.1_BraROA R-BRA-1125587 A03p003820.1_BraROA [cytosol] R-BRA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119379 Flavin biosynthesis none Brassica rapa A03p004170.1_BraROA R-BRA-9611889 A03p004170.1_BraROA [mitochondrial matrix] R-BRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119479 Valine degradation none Brassica rapa A03p004590.1_BraROA R-BRA-1122351-2 A03p004590.1_BraROA [cytosol] R-BRA-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119354 Asparagine biosynthesis III none Brassica rapa A03p004590.1_BraROA R-BRA-5633281-2 A03p004590.1_BraROA [cytosol] R-BRA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119495 Citrulline biosynthesis none Brassica rapa A03p004590.1_BraROA R-BRA-1122351-2 A03p004590.1_BraROA [cytosol] R-BRA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119553 Asparagine biosynthesis none Brassica rapa A03p004690.1_BraROA R-BRA-5632192-4 A03p004690.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A03p005050.1_BraROA R-BRA-1127574-4 A03p005050.1_BraROA [cytosol] R-BRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119465 Sucrose biosynthesis none Brassica rapa A03p005070.1_BraROA R-BRA-9681915-2 A03p005070.1_BraROA [Golgi membrane] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A03p005470.1_BraROA R-BRA-1127738 A03p005470.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A03p005470.1_BraROA R-BRA-1127738 A03p005470.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A03p005470.1_BraROA R-BRA-5606514 A03p005470.1_BraROA [plastid stroma] R-BRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119419 Lysine biosynthesis VI none Brassica rapa A03p006340.1_BraROA R-BRA-9658681 A03p006340.1_BraROA [plasma membrane] R-BRA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119567 Beta-alanine biosynthesis I none Brassica rapa A03p006600.1_BraROA R-BRA-1126714-3 A03p006600.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A03p006600.1_BraROA R-BRA-1126714-3 A03p006600.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A03p006600.1_BraROA R-BRA-1126714-3 A03p006600.1_BraROA [cytosol] R-BRA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119295 Homoserine biosynthesis none Brassica rapa A03p006600.1_BraROA R-BRA-5606484-3 A03p006600.1_BraROA [plastid stroma] R-BRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119419 Lysine biosynthesis VI none Brassica rapa A03p007000.1_BraROA R-BRA-5631958 A03p007000.1_BraROA [cytosol] R-BRA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119289 Arginine degradation none Brassica rapa A03p007000.1_BraROA R-BRA-1122345 A03p007000.1_BraROA [cytosol] R-BRA-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119318 Proline biosynthesis V (from arginine) none Brassica rapa A03p007000.1_BraROA R-BRA-1122345 A03p007000.1_BraROA [cytosol] R-BRA-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119631 Proline biosynthesis I none Brassica rapa A03p007350.1_BraROA R-BRA-9681886-5 A03p007350.1_BraROA [cytosol] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A03p007470.1_BraROA R-BRA-9681910-3 A03p007470.1_BraROA [Golgi membrane] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A03p007780.1_BraROA R-BRA-1127467-2 A03p007780.1_BraROA [cytosol] R-BRA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119456 Brassinosteroid biosynthesis II none Brassica rapa A03p008090.1_BraROA R-BRA-8858112 A03p008090.1_BraROA [plasma membrane] R-BRA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8858053 Polar auxin transport none Brassica rapa A03p008180.1_BraROA R-BRA-9638999 A03p008180.1_BraROA [cytosol] R-BRA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119434 Phytic acid biosynthesis (lipid-independent) none Brassica rapa A03p008450.1_BraROA R-BRA-1124861 A03p008450.1_BraROA [plastid stroma] R-BRA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119449 Carotenoid biosynthesis none Brassica rapa A03p008900.1_BraROA R-BRA-1125151 A03p008900.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A03p008900.1_BraROA R-BRA-1125151 A03p008900.1_BraROA [cytosol] R-BRA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119501 S-adenosyl-L-methionine cycle none Brassica rapa A03p008950.1_BraROA R-BRA-1123046 A03p008950.1_BraROA [cytosol] R-BRA-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119386 UDP-N-acetylgalactosamine biosynthesis none Brassica rapa A03p009640.1_BraROA R-BRA-9930255 MPK15 [nucleoplasm] R-BRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9766881 TF network involved in salinity response none Brassica rapa A03p010600.1_BraROA R-BRA-1129561-2 A03p010600.1_BraROA [cytosol] R-BRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119452 Galactose degradation II none Brassica rapa A03p010600.1_BraROA R-BRA-1129561-2 A03p010600.1_BraROA [cytosol] R-BRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119465 Sucrose biosynthesis none Brassica rapa A03p010620.1_BraROA R-BRA-6788201 A03p010620.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A03p010720.1_BraROA R-BRA-1125151-4 A03p010720.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A03p010720.1_BraROA R-BRA-1125151-4 A03p010720.1_BraROA [cytosol] R-BRA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119501 S-adenosyl-L-methionine cycle none Brassica rapa A03p011000.1_BraROA R-BRA-9640739 A03p011000.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A03p011310.1_BraROA R-BRA-9826654-2 A03p011310.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A03p011470.1_BraROA R-BRA-9618056-2 A03p011470.1_BraROA [plasma membrane] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A03p011950.1_BraROA R-BRA-9826691-5 A03p011950.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A03p012090.1_BraROA R-BRA-1123470-2 A03p012090.1_BraROA [cytosol] R-BRA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119292 Cytokinins 7-N-glucoside biosynthesis none Brassica rapa A03p012090.1_BraROA R-BRA-1123470-2 A03p012090.1_BraROA [cytosol] R-BRA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119375 Cytokinins 9-N-glucoside biosynthesis none Brassica rapa A03p012090.1_BraROA R-BRA-1123470-2 A03p012090.1_BraROA [cytosol] R-BRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119473 Cytokinins-O-glucoside biosynthesis none Brassica rapa A03p012240.1_BraROA R-BRA-1126799-2 A03p012240.1_BraROA [cytosol] R-BRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119428 GDP-D-rhamnose biosynthesis none Brassica rapa A03p012240.1_BraROA R-BRA-1126799-2 A03p012240.1_BraROA [cytosol] R-BRA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119563 UDP-D-xylose biosynthesis none Brassica rapa A03p012240.1_BraROA R-BRA-1126799-2 A03p012240.1_BraROA [cytosol] R-BRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brassica rapa A03p013290.1_BraROA R-BRA-1124048 A03p013290.1_BraROA [cytosol] R-BRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119610 Biotin biosynthesis II none Brassica rapa A03p013400.1_BraROA R-BRA-9920292-4 A03p013400.1_BraROA [nucleoplasm] R-BRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934108 Short day regulated expression of florigens none Brassica rapa A03p013520.1_BraROA R-BRA-8858085 A03p013520.1_BraROA [plasma membrane] R-BRA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8858053 Polar auxin transport none Brassica rapa A03p013520.1_BraROA R-BRA-8858085 A03p013520.1_BraROA [plasma membrane] R-BRA-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924494 Gravity sensing and statolith sedimentation none Brassica rapa A03p013520.1_BraROA R-BRA-9928298 PIN2 [endosome] R-BRA-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924494 Gravity sensing and statolith sedimentation none Brassica rapa A03p013740.1_BraROA R-BRA-9826609 A03p013740.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A03p013820.1_BraROA R-BRA-1128798 A03p013820.1_BraROA [cytosol] R-BRA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119331 Cysteine biosynthesis I none Brassica rapa A03p014060.1_BraROA R-BRA-1127161-3 A03p014060.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A03p014790.1_BraROA R-BRA-1128606-4 A03p014790.1_BraROA [mitochondrial matrix] R-BRA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119365 Lysine degradation II none Brassica rapa A03p014790.1_BraROA R-BRA-1173244-4 A03p014790.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A03p014930.1_BraROA R-BRA-9918175 A03p014930.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A03p015430.1_BraROA R-BRA-1130084-3 A03p015430.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A03p015700.1_BraROA R-BRA-1129859 A03p015700.1_BraROA [chloroplast stroma] R-BRA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119443 Ammonia assimilation cycle none Brassica rapa A03p015700.1_BraROA R-BRA-5606382 A03p015700.1_BraROA [plastid stroma] R-BRA-1119535 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119535 Glutamate biosynthesis IV none Brassica rapa A03p016410.1_BraROA R-BRA-1129478 A03p016410.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A03p016410.1_BraROA R-BRA-1129478 A03p016410.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A03p016410.1_BraROA R-BRA-5606483 A03p016410.1_BraROA [plastid stroma] R-BRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119419 Lysine biosynthesis VI none Brassica rapa A03p016490.1_BraROA R-BRA-9826696-5 A03p016490.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A03p016870.1_BraROA R-BRA-9025447 A03p016870.1_BraROA [cytosol] R-BRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119325 Sphingolipid metabolism none Brassica rapa A03p017280.1_BraROA R-BRA-1125804 A03p017280.1_BraROA [cytosol] R-BRA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119300 Glycolipid desaturation none Brassica rapa A03p017320.1_BraROA R-BRA-8879029-3 DREB1G [nucleoplasm] R-BRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8879007 Response to cold temperature none Brassica rapa A03p017320.1_BraROA R-BRA-8879071-3 CBF1 homolog [nucleoplasm] R-BRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8879007 Response to cold temperature none Brassica rapa A03p017320.1_BraROA R-BRA-8879085-3 A03p017320.1_BraROA [nucleoplasm] R-BRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8879007 Response to cold temperature none Brassica rapa A03p017590.1_BraROA R-BRA-1127076-2 A03p017590.1_BraROA [cytosol] R-BRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119418 Suberin biosynthesis none Brassica rapa A03p017590.1_BraROA R-BRA-1127076-2 A03p017590.1_BraROA [cytosol] R-BRA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119582 Phenylpropanoid biosynthesis, initial reactions none Brassica rapa A03p017600.1_BraROA R-BRA-1127076 A03p017600.1_BraROA [cytosol] R-BRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119418 Suberin biosynthesis none Brassica rapa A03p017600.1_BraROA R-BRA-1127076 A03p017600.1_BraROA [cytosol] R-BRA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119582 Phenylpropanoid biosynthesis, initial reactions none Brassica rapa A03p018230.1_BraROA R-BRA-1123430-2 A03p018230.1_BraROA [cytosol] R-BRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119437 Glutathione redox reactions I none Brassica rapa A03p018560.1_BraROA R-BRA-1125187 A03p018560.1_BraROA [cytosol] R-BRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119276 Choline biosynthesis III none Brassica rapa A03p019240.1_BraROA R-BRA-1128385-4 A03p019240.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A03p019470.1_BraROA R-BRA-9035727-2 A03p019470.1_BraROA [cytosol] R-BRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9035605 Regulation of seed size none Brassica rapa A03p019470.1_BraROA R-BRA-9035692-2 A03p019470.1_BraROA [nucleoplasm] R-BRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9035605 Regulation of seed size none Brassica rapa A03p020360.1_BraROA R-BRA-1127089-4 A03p020360.1_BraROA [cytosol] R-BRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119465 Sucrose biosynthesis none Brassica rapa A03p020500.1_BraROA R-BRA-9640739-5 A03p020500.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A03p020610.1_BraROA R-BRA-1123337-2 A03p020610.1_BraROA [plastid stroma] R-BRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119509 Histidine biosynthesis I none Brassica rapa A03p021140.1_BraROA R-BRA-9618056-4 A03p021140.1_BraROA [plasma membrane] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A03p021460.1_BraROA R-BRA-1125698-2 A03p021460.1_BraROA [cytosol] R-BRA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119436 Peptidoglycan biosynthesis I none Brassica rapa A03p021920.1_BraROA R-BRA-1129539-2 A03p021920.1_BraROA [cytosol] R-BRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119610 Biotin biosynthesis II none Brassica rapa A03p022710.1_BraROA R-BRA-1130032-3 A03p022710.1_BraROA [mitochondrial inner membrane] R-BRA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119260 Cardiolipin biosynthesis none Brassica rapa A03p022970.1_BraROA R-BRA-1130202 A03p022970.1_BraROA [cytosol] R-BRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119410 Ascorbate biosynthesis none Brassica rapa A03p022980.1_BraROA R-BRA-1127913-2 A03p022980.1_BraROA [cytosol] R-BRA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119495 Citrulline biosynthesis none Brassica rapa A03p022980.1_BraROA R-BRA-1127913-2 A03p022980.1_BraROA [cytosol] R-BRA-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119631 Proline biosynthesis I none Brassica rapa A03p023060.1_BraROA R-BRA-6787181-4 A03p023060.1_BraROA [cytosol] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A03p023270.1_BraROA R-BRA-5654797-5 A03p023270.1_BraROA [nucleoplasm] R-BRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5654828 Strigolactone signaling none Brassica rapa A03p023450.1_BraROA R-BRA-9675399-4 A03p023450.1_BraROA [nucleoplasm] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A03p023700.1_BraROA R-BRA-1126996-2 A03p023700.1_BraROA [cytosol] R-BRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119316 Phenylpropanoid biosynthesis none Brassica rapa A03p023860.1_BraROA R-BRA-1122326 A03p023860.1_BraROA [cytosol] R-BRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119438 Secologanin and strictosidine biosynthesis none Brassica rapa A03p024370.1_BraROA R-BRA-9658676-2 A03p024370.1_BraROA [cytosol] R-BRA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119567 Beta-alanine biosynthesis I none Brassica rapa A03p024400.1_BraROA R-BRA-5632241-5 A03p024400.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A03p024640.1_BraROA R-BRA-1123092-2 A03p024640.1_BraROA [cytosol] R-BRA-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119278 PRPP biosynthesis I none Brassica rapa A03p024720.1_BraROA R-BRA-1124032 A03p024720.1_BraROA [cytosol] R-BRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119540 Leucine biosynthesis none Brassica rapa A03p024970.1_BraROA R-BRA-1123430-3 A03p024970.1_BraROA [cytosol] R-BRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119437 Glutathione redox reactions I none Brassica rapa A03p024980.1_BraROA R-BRA-1124791 A03p024980.1_BraROA [cytosol] R-BRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119610 Biotin biosynthesis II none Brassica rapa A03p025260.1_BraROA R-BRA-9675391 A03p025260.1_BraROA [nucleoplasm] R-BRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675508 Root elongation none Brassica rapa A03p025280.1_BraROA R-BRA-9639789-5 A03p025280.1_BraROA [plasma membrane] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A03p025410.1_BraROA R-BRA-1129184-2 A03p025410.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A03p025410.1_BraROA R-BRA-1129184-2 A03p025410.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A03p025410.1_BraROA R-BRA-5606505-2 A03p025410.1_BraROA [plastid stroma] R-BRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119419 Lysine biosynthesis VI none Brassica rapa A03p025570.1_BraROA R-BRA-1129055-3 A03p025570.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A03p025660.1_BraROA R-BRA-8933728 A03p025660.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A03p025780.1_BraROA R-BRA-9924407-3 EXPB5 [basolateral plasma membrane] R-BRA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924451 Shoot (tiller) formation and regulation of tiller angle none Brassica rapa A03p025920.1_BraROA R-BRA-1128197 A03p025920.1_BraROA [plastid stroma] R-BRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119430 Chorismate biosynthesis none Brassica rapa A03p026210.1_BraROA R-BRA-1125556-2 A03p026210.1_BraROA [cytosol] R-BRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119410 Ascorbate biosynthesis none Brassica rapa A03p026210.1_BraROA R-BRA-1125556-2 A03p026210.1_BraROA [cytosol] R-BRA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119628 GDP-mannose metabolism none Brassica rapa A03p026540.1_BraROA R-BRA-8933788-3 A03p026540.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A03p026550.1_BraROA R-BRA-6787202-3 A03p026550.1_BraROA [cytosol] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A03p027280.1_BraROA R-BRA-9611528-5 RLCK176 [cytosol] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A03p027280.1_BraROA R-BRA-9611477-5 phospho-phosphorylated-RLCK176 [cytosol] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A03p027400.1_BraROA R-BRA-9608682-2 A03p027400.1_BraROA [nucleoplasm] R-BRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934036 Long day regulated expression of florigens none Brassica rapa A03p027400.1_BraROA R-BRA-9608682-2 A03p027400.1_BraROA [nucleoplasm] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A03p027400.1_BraROA R-BRA-9608606-2 A03p027400.1_BraROA [cytosol] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A03p027680.1_BraROA R-BRA-9608694-5 A03p027680.1_BraROA [cytosol] R-BRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928831 Severe drought none Brassica rapa A03p027680.1_BraROA R-BRA-9928774-5 A03p027680.1_BraROA [nucleoplasm] R-BRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928831 Severe drought none Brassica rapa A03p027900.1_BraROA R-BRA-9645866 A03p027900.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A03p027900.1_BraROA R-BRA-9645866 A03p027900.1_BraROA [nucleoplasm] R-BRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675824 DNA replication Initiation none Brassica rapa A03p028200.1_BraROA R-BRA-1123860-3 A03p028200.1_BraROA [cytosol] R-BRA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119292 Cytokinins 7-N-glucoside biosynthesis none Brassica rapa A03p028200.1_BraROA R-BRA-1123860-3 A03p028200.1_BraROA [cytosol] R-BRA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119375 Cytokinins 9-N-glucoside biosynthesis none Brassica rapa A03p028200.1_BraROA R-BRA-1123860-3 A03p028200.1_BraROA [cytosol] R-BRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119473 Cytokinins-O-glucoside biosynthesis none Brassica rapa A03p028260.1_BraROA R-BRA-1129547-10 A03p028260.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A03p028260.1_BraROA R-BRA-1129547-10 A03p028260.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A03p028260.1_BraROA R-BRA-1129547-10 A03p028260.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A03p028380.1_BraROA R-BRA-5367743 A03p028380.1_BraROA [cytosol] R-BRA-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5367729 Strigolactone biosynthesis none Brassica rapa A03p028580.1_BraROA R-BRA-9035593-2 A03p028580.1_BraROA [cytosol] R-BRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9035605 Regulation of seed size none Brassica rapa A03p028580.1_BraROA R-BRA-9035634-2 A03p028580.1_BraROA [nucleoplasm] R-BRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9035605 Regulation of seed size none Brassica rapa A03p028580.1_BraROA R-BRA-9035593-2 A03p028580.1_BraROA [cytosol] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A03p028580.1_BraROA R-BRA-9035634-2 A03p028580.1_BraROA [nucleoplasm] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A03p028650.1_BraROA R-BRA-1125417 A03p028650.1_BraROA [cytosol] R-BRA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119265 Tetrahydrofolate biosynthesis I none Brassica rapa A03p028650.1_BraROA R-BRA-1125417 A03p028650.1_BraROA [cytosol] R-BRA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119523 Tetrahydrofolate biosynthesis II none Brassica rapa A03p028690.1_BraROA R-BRA-9645954 A03p028690.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A03p028910.1_BraROA R-BRA-1124490 A03p028910.1_BraROA [cytosol] R-BRA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119534 Pyridoxal 5'-phosphate salvage pathway none Brassica rapa A03p028910.1_BraROA R-BRA-1124490 A03p028910.1_BraROA [cytosol] R-BRA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119594 Pyridoxal 5'-phosphate biosynthesis none Brassica rapa A03p028920.1_BraROA R-BRA-5608140 A03p028920.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A03p029370.1_BraROA R-BRA-1123895-5 A03p029370.1_BraROA [cytosol] R-BRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119334 Ethylene biosynthesis from methionine none Brassica rapa A03p029370.1_BraROA R-BRA-1123895-5 A03p029370.1_BraROA [cytosol] R-BRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119624 Methionine salvage pathway none Brassica rapa A03p029380.1_BraROA R-BRA-9826652 OSH15 [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A03p029380.1_BraROA R-BRA-9631619 A03p029380.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A03p029700.1_BraROA R-BRA-5631969 A03p029700.1_BraROA [mitochondrial matrix] R-BRA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119289 Arginine degradation none Brassica rapa A03p029700.1_BraROA R-BRA-5633275 A03p029700.1_BraROA [cytosol] R-BRA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119495 Citrulline biosynthesis none Brassica rapa A03p029790.1_BraROA R-BRA-9918264 ISA3 [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A03p029990.1_BraROA R-BRA-9675481-4 A03p029990.1_BraROA [cytosol] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A03p030420.1_BraROA R-BRA-9618171 A03p030420.1_BraROA [plasma membrane] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A03p032110.1_BraROA R-BRA-5608164-3 A03p032110.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A03p032110.1_BraROA R-BRA-5608164-3 A03p032110.1_BraROA [nucleoplasm] R-BRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030557 Lateral root initiation none Brassica rapa A03p032110.1_BraROA R-BRA-5608164-3 A03p032110.1_BraROA [nucleoplasm] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A03p032110.1_BraROA R-BRA-9658967-3 A03p032110.1_BraROA [cytosol] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A03p032160.1_BraROA R-BRA-5632341 A03p032160.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A03p032160.1_BraROA R-BRA-5632170 phospho-A03p032160.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A03p032410.1_BraROA R-BRA-1128337-2 A03p032410.1_BraROA [plastid stroma] R-BRA-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119308 Momilactone biosynthesis none Brassica rapa A03p032410.1_BraROA R-BRA-1128244-2 A03p032410.1_BraROA [chloroplast] R-BRA-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119348 Ent-kaurene biosynthesis none Brassica rapa A03p032590.1_BraROA R-BRA-9639810-5 A03p032590.1_BraROA [cell wall] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A03p032930.1_BraROA R-BRA-9640745 A03p032930.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A03p032930.1_BraROA R-BRA-9640745 A03p032930.1_BraROA [nucleoplasm] R-BRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675824 DNA replication Initiation none Brassica rapa A03p033220.1_BraROA R-BRA-9916298 OsEXPA3 [extracellular region] R-BRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9916190 Root angle formation: elongation and curvature response none Brassica rapa A03p033830.1_BraROA R-BRA-5146758-2 A03p033830.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A03p034200.1_BraROA R-BRA-3240748-2 A03p034200.1_BraROA [cytosol] R-BRA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Brassica rapa A03p034350.1_BraROA R-BRA-4752546-3 A03p034350.1_BraROA [plastid stroma] R-BRA-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119498 Phylloquinone biosynthesis none Brassica rapa A03p034640.1_BraROA R-BRA-9681910 A03p034640.1_BraROA [Golgi membrane] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A03p034780.1_BraROA R-BRA-5632238-2 A03p034780.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A03p034780.1_BraROA R-BRA-5632238-2 A03p034780.1_BraROA [cytosol] R-BRA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934257 Transition from vegetative to reproductive shoot apical meristem none Brassica rapa A03p034780.1_BraROA R-BRA-9927894-2 A03p034780.1_BraROA [nucleoplasm] R-BRA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934257 Transition from vegetative to reproductive shoot apical meristem none Brassica rapa A03p034780.1_BraROA R-BRA-5632238-2 A03p034780.1_BraROA [cytosol] R-BRA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9609102 Flower development none Brassica rapa A03p034780.1_BraROA R-BRA-5632238-2 A03p034780.1_BraROA [cytosol] R-BRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928831 Severe drought none Brassica rapa A03p034780.1_BraROA R-BRA-9927894-2 A03p034780.1_BraROA [nucleoplasm] R-BRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928831 Severe drought none Brassica rapa A03p034930.1_BraROA R-BRA-1129816-4 A03p034930.1_BraROA [plastid stroma] R-BRA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119367 Polyisoprenoid biosynthesis none Brassica rapa A03p034930.1_BraROA R-BRA-1129816-4 A03p034930.1_BraROA [plastid stroma] R-BRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119615 Mevalonate pathway none Brassica rapa A03p035000.1_BraROA R-BRA-9639016 A03p035000.1_BraROA [cytosol] R-BRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119410 Ascorbate biosynthesis none Brassica rapa A03p035000.1_BraROA R-BRA-9639016 A03p035000.1_BraROA [cytosol] R-BRA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119434 Phytic acid biosynthesis (lipid-independent) none Brassica rapa A03p035350.1_BraROA R-BRA-1125151-5 A03p035350.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A03p035350.1_BraROA R-BRA-1125151-5 A03p035350.1_BraROA [cytosol] R-BRA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119501 S-adenosyl-L-methionine cycle none Brassica rapa A03p035440.1_BraROA R-BRA-1122785-4 A03p035440.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A03p035440.1_BraROA R-BRA-1126726-4 A03p035440.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A03p035440.1_BraROA R-BRA-1122785-4 A03p035440.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A03p035440.1_BraROA R-BRA-1126726-4 A03p035440.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A03p035440.1_BraROA R-BRA-1122785-4 A03p035440.1_BraROA [cytosol] R-BRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119570 Cytosolic glycolysis none Brassica rapa A03p036720.1_BraROA R-BRA-1127695-3 A03p036720.1_BraROA [plastid stroma] R-BRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119430 Chorismate biosynthesis none Brassica rapa A03p036840.1_BraROA R-BRA-1129507 A03p036840.1_BraROA [cytosol] R-BRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119452 Galactose degradation II none Brassica rapa A03p037510.1_BraROA R-BRA-1126883 A03p037510.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A03p037750.1_BraROA R-BRA-9639088-5 A03p037750.1_BraROA [plasma membrane] R-BRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639136 Response to Aluminum stress none Brassica rapa A03p037840.1_BraROA R-BRA-1127031 A03p037840.1_BraROA [cytosol] R-BRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119460 Isoleucine biosynthesis from threonine none Brassica rapa A03p038420.1_BraROA R-BRA-1129539-3 A03p038420.1_BraROA [cytosol] R-BRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119610 Biotin biosynthesis II none Brassica rapa A03p039020.1_BraROA R-BRA-1129616-2 A03p039020.1_BraROA [cytosol] R-BRA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119300 Glycolipid desaturation none Brassica rapa A03p039110.1_BraROA R-BRA-9681885-2 A03p039110.1_BraROA [Golgi membrane] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A03p039660.1_BraROA R-BRA-6788172-3 A03p039660.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A03p039690.1_BraROA R-BRA-9640763 A03p039690.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A03p039690.1_BraROA R-BRA-9640885 phospho-A03p039690.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A03p039750.1_BraROA R-BRA-9916302-2 A03p039750.1_BraROA [nucleoplasm] R-BRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9916190 Root angle formation: elongation and curvature response none Brassica rapa A03p039930.1_BraROA R-BRA-5149643-2 A03p039930.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A03p040630.1_BraROA R-BRA-5679401 A03p040630.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A03p040780.1_BraROA R-BRA-1130222 A03p040780.1_BraROA [cytosol] R-BRA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119596 Glutamate biosynthesis I none Brassica rapa A03p040980.1_BraROA R-BRA-8987473 A03p040980.1_BraROA [peroxisomal matrix] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A03p040980.1_BraROA R-BRA-1124984 A03p040980.1_BraROA [cytosol] R-BRA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119596 Glutamate biosynthesis I none Brassica rapa A03p040990.1_BraROA R-BRA-8987473-5 A03p040990.1_BraROA [peroxisomal matrix] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A03p040990.1_BraROA R-BRA-1124984-5 A03p040990.1_BraROA [cytosol] R-BRA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119596 Glutamate biosynthesis I none Brassica rapa A03p042190.1_BraROA R-BRA-1125997 A03p042190.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A03p042190.1_BraROA R-BRA-1125997 A03p042190.1_BraROA [nucleoplasm] R-BRA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030680 Crown root development none Brassica rapa A03p042730.1_BraROA R-BRA-1129914 A03p042730.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A03p042960.1_BraROA R-BRA-1125564 A03p042960.1_BraROA [cytosol] R-BRA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119291 Nitrate assimilation none Brassica rapa A03p042960.1_BraROA R-BRA-1125564 A03p042960.1_BraROA [cytosol] R-BRA-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119293 Glutamine biosynthesis I none Brassica rapa A03p042960.1_BraROA R-BRA-1125564 A03p042960.1_BraROA [cytosol] R-BRA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119443 Ammonia assimilation cycle none Brassica rapa A03p043750.1_BraROA R-BRA-9025430 A03p043750.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119325 Sphingolipid metabolism none Brassica rapa A03p043760.1_BraROA R-BRA-1126380 A03p043760.1_BraROA [cytosol] R-BRA-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119609 Phaseic acid biosynthesis none Brassica rapa A03p043780.1_BraROA R-BRA-9928801-3 A03p043780.1_BraROA [nucleoplasm] R-BRA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928995 Drought escape (DE) via ABA-dependent pathway none Brassica rapa A03p044020.1_BraROA R-BRA-1122974-2 A03p044020.1_BraROA [mitochondrial matrix] R-BRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119479 Valine degradation none Brassica rapa A03p044850.1_BraROA R-BRA-1126034-3 A03p044850.1_BraROA [cytosol] R-BRA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119534 Pyridoxal 5'-phosphate salvage pathway none Brassica rapa A03p044850.1_BraROA R-BRA-1126034-3 A03p044850.1_BraROA [cytosol] R-BRA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119594 Pyridoxal 5'-phosphate biosynthesis none Brassica rapa A03p045040.1_BraROA R-BRA-9920284 A03p045040.1_BraROA [nucleoplasm] R-BRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934108 Short day regulated expression of florigens none Brassica rapa A03p045140.1_BraROA R-BRA-4723654 A03p045140.1_BraROA [plastid stroma] R-BRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119464 Methylerythritol phosphate pathway none Brassica rapa A03p045140.1_BraROA R-BRA-1130030 A03p045140.1_BraROA [cytosol] R-BRA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119594 Pyridoxal 5'-phosphate biosynthesis none Brassica rapa A03p045140.1_BraROA R-BRA-1130030 A03p045140.1_BraROA [cytosol] R-BRA-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119629 Thiamine biosynthesis none Brassica rapa A03p045840.1_BraROA R-BRA-9924379 HSFA2D [nucleoplasm] R-BRA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924451 Shoot (tiller) formation and regulation of tiller angle none Brassica rapa A03p045910.1_BraROA R-BRA-1128257 A03p045910.1_BraROA [plastid stroma] R-BRA-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119529 Sulfate activation for sulfonation none Brassica rapa A03p046110.1_BraROA R-BRA-8879002-2 A03p046110.1_BraROA [nucleoplasm] R-BRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8879007 Response to cold temperature none Brassica rapa A03p046270.1_BraROA R-BRA-1129029-3 A03p046270.1_BraROA [cytosol] R-BRA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119501 S-adenosyl-L-methionine cycle none Brassica rapa A03p046290.1_BraROA R-BRA-1129921-2 A03p046290.1_BraROA [cytosol] R-BRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119428 GDP-D-rhamnose biosynthesis none Brassica rapa A03p046290.1_BraROA R-BRA-1129921-2 A03p046290.1_BraROA [cytosol] R-BRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brassica rapa A03p046370.1_BraROA R-BRA-1129113-2 A03p046370.1_BraROA [cytosol] R-BRA-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119298 Glutathione redox reactions II none Brassica rapa A03p046370.1_BraROA R-BRA-1129113-2 A03p046370.1_BraROA [cytosol] R-BRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119437 Glutathione redox reactions I none Brassica rapa A03p046520.1_BraROA R-BRA-9675439 A03p046520.1_BraROA [mitochondrial matrix] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A03p046870.1_BraROA R-BRA-9640687 A03p046870.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A03p047180.1_BraROA R-BRA-9639789 A03p047180.1_BraROA [plasma membrane] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A03p047260.1_BraROA R-BRA-1124959 A03p047260.1_BraROA [cytosol] R-BRA-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119623 Acyl-CoA synthetase pathway none Brassica rapa A03p047270.1_BraROA R-BRA-1123161 A03p047270.1_BraROA [chloroplast] R-BRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119494 Tryptophan biosynthesis none Brassica rapa A03p047770.1_BraROA R-BRA-9640704 A03p047770.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A03p047770.1_BraROA R-BRA-9640704 A03p047770.1_BraROA [nucleoplasm] R-BRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675824 DNA replication Initiation none Brassica rapa A03p047860.1_BraROA R-BRA-1130153 A03p047860.1_BraROA [cytosol] R-BRA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119332 Jasmonic acid biosynthesis none Brassica rapa A03p047860.1_BraROA R-BRA-6787115 A03p047860.1_BraROA [nucleoplasm] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A03p048050.1_BraROA R-BRA-8987571-2 A03p048050.1_BraROA [peroxisomal matrix] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A03p048170.1_BraROA R-BRA-5606521 A03p048170.1_BraROA [plastid stroma] R-BRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119419 Lysine biosynthesis VI none Brassica rapa A03p048380.1_BraROA R-BRA-9639029-2 A03p048380.1_BraROA [cytosol] R-BRA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119434 Phytic acid biosynthesis (lipid-independent) none Brassica rapa A03p049060.1_BraROA R-BRA-9640761 A03p049060.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A03p049060.1_BraROA R-BRA-9640761 A03p049060.1_BraROA [nucleoplasm] R-BRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675824 DNA replication Initiation none Brassica rapa A03p049090.1_BraROA R-BRA-1125093-2 A03p049090.1_BraROA [cytosol] R-BRA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119456 Brassinosteroid biosynthesis II none Brassica rapa A03p049220.1_BraROA R-BRA-1123786 A03p049220.1_BraROA R-BRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119403 Removal of superoxide radicals none Brassica rapa A03p049560.1_BraROA R-BRA-1125237-4 A03p049560.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A03p049770.1_BraROA R-BRA-1127173-6 A03p049770.1_BraROA [cytosol] R-BRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119540 Leucine biosynthesis none Brassica rapa A03p050350.1_BraROA R-BRA-8933833-2 A03p050350.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A03p050350.1_BraROA R-BRA-8933833-2 A03p050350.1_BraROA [nucleoplasm] R-BRA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928995 Drought escape (DE) via ABA-dependent pathway none Brassica rapa A03p050360.1_BraROA R-BRA-1122934 A03p050360.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A03p050520.1_BraROA R-BRA-1128812 A03p050520.1_BraROA [cytosol] R-BRA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119393 Asparagine degradation I none Brassica rapa A03p050820.1_BraROA R-BRA-1123895-9 A03p050820.1_BraROA [cytosol] R-BRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119334 Ethylene biosynthesis from methionine none Brassica rapa A03p050820.1_BraROA R-BRA-1123895-9 A03p050820.1_BraROA [cytosol] R-BRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119624 Methionine salvage pathway none Brassica rapa A03p051010.1_BraROA R-BRA-9640671 A03p051010.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A03p051010.1_BraROA R-BRA-9640671 A03p051010.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A03p051160.1_BraROA R-BRA-4415007-3 A03p051160.1_BraROA [cytosol] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A03p051160.1_BraROA R-BRA-4415016-3 phospho-A03p051160.1_BraROA [cytosol] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A03p051160.1_BraROA R-BRA-4415007-3 A03p051160.1_BraROA [cytosol] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A03p051260.1_BraROA R-BRA-5632334-5 A03p051260.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A03p051260.1_BraROA R-BRA-5632197-5 phospho-A03p051260.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A03p051260.1_BraROA R-BRA-5632183-5 phospho-A03p051260.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A03p051260.1_BraROA R-BRA-5632334-5 A03p051260.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A03p051630.1_BraROA R-BRA-2672431-3 A03p051630.1_BraROA [cytosol] R-BRA-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119322 Leucodelphinidin biosynthesis none Brassica rapa A03p051630.1_BraROA R-BRA-2672431-3 A03p051630.1_BraROA [cytosol] R-BRA-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Brassica rapa A03p051630.1_BraROA R-BRA-1124195-3 A03p051630.1_BraROA [cytosol] R-BRA-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119531 Flavonoid biosynthesis none Brassica rapa A03p051950.1_BraROA R-BRA-9916309 CPK3 [plasma membrane] R-BRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9916190 Root angle formation: elongation and curvature response none Brassica rapa A03p052010.1_BraROA R-BRA-9924379-4 HSFA2D [nucleoplasm] R-BRA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924451 Shoot (tiller) formation and regulation of tiller angle none Brassica rapa A03p052260.1_BraROA R-BRA-6788234-3 A03p052260.1_BraROA [cytosol] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A03p052260.1_BraROA R-BRA-1124041-3 A03p052260.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A03p053740.1_BraROA R-BRA-9658589-3 A03p053740.1_BraROA [endoplasmic reticulum lumen] R-BRA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119502 Allantoin degradation none Brassica rapa A03p054150.1_BraROA R-BRA-1130181-2 A03p054150.1_BraROA [plastid stroma] R-BRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119430 Chorismate biosynthesis none Brassica rapa A03p054350.1_BraROA R-BRA-5138481-2 A03p054350.1_BraROA [plastid stroma] R-BRA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119263 Arginine biosynthesis none Brassica rapa A03p054350.1_BraROA R-BRA-5138481-2 A03p054350.1_BraROA [plastid stroma] R-BRA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119539 Ornithine biosynthesis none Brassica rapa A03p054490.1_BraROA R-BRA-5632319-2 phospho-A03p054490.1_BraROA [plasma membrane] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A03p055060.1_BraROA R-BRA-5632139-3 A03p055060.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A03p055090.1_BraROA R-BRA-1124491 A03p055090.1_BraROA [plasma membrane] R-BRA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119314 Cellulose biosynthesis none Brassica rapa A03p055220.1_BraROA R-BRA-9618197-3 A03p055220.1_BraROA [plasma membrane] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A03p055470.1_BraROA R-BRA-1128857-2 A03p055470.1_BraROA [cytosol] R-BRA-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119609 Phaseic acid biosynthesis none Brassica rapa A03p055940.1_BraROA R-BRA-9658573 A03p055940.1_BraROA [endoplasmic reticulum lumen] R-BRA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119502 Allantoin degradation none Brassica rapa A03p056210.1_BraROA R-BRA-1125834 A03p056210.1_BraROA [cytosol] R-BRA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119379 Flavin biosynthesis none Brassica rapa A03p056350.1_BraROA R-BRA-1128069 A03p056350.1_BraROA [cytosol] R-BRA-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Brassica rapa A03p056350.1_BraROA R-BRA-1128069 A03p056350.1_BraROA [cytosol] R-BRA-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Brassica rapa A03p056530.1_BraROA R-BRA-9025487-2 A03p056530.1_BraROA [cytosol] R-BRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119325 Sphingolipid metabolism none Brassica rapa A03p058710.1_BraROA R-BRA-1129547-4 A03p058710.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A03p058710.1_BraROA R-BRA-1129547-4 A03p058710.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A03p058710.1_BraROA R-BRA-1129547-4 A03p058710.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A03p058760.1_BraROA R-BRA-1129547-6 A03p058760.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A03p058760.1_BraROA R-BRA-1129547-6 A03p058760.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A03p058760.1_BraROA R-BRA-1129547-6 A03p058760.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A03p058800.1_BraROA R-BRA-1129547-2 A03p058800.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A03p058800.1_BraROA R-BRA-1129547-2 A03p058800.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A03p058800.1_BraROA R-BRA-1129547-2 A03p058800.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A03p059040.1_BraROA R-BRA-9826647 A03p059040.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A03p059220.1_BraROA R-BRA-1124788-2 A03p059220.1_BraROA [cytosol] R-BRA-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119601 Trehalose degradation II none Brassica rapa A03p059300.1_BraROA R-BRA-9025699 A03p059300.1_BraROA [plasma membrane] R-BRA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8858053 Polar auxin transport none Brassica rapa A03p059300.1_BraROA R-BRA-9025699 A03p059300.1_BraROA [plasma membrane] R-BRA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9025727 Iron uptake and transport in root vascular system none Brassica rapa A03p059940.1_BraROA R-BRA-2960195 A03p059940.1_BraROA [cytosol] R-BRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119410 Ascorbate biosynthesis none Brassica rapa A03p059940.1_BraROA R-BRA-2960195 A03p059940.1_BraROA [cytosol] R-BRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119570 Cytosolic glycolysis none Brassica rapa A03p060040.1_BraROA R-BRA-5138489 A03p060040.1_BraROA [plastid stroma] R-BRA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119263 Arginine biosynthesis none Brassica rapa A03p060040.1_BraROA R-BRA-1127893 A03p060040.1_BraROA [cytosol] R-BRA-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119444 Canavanine biosynthesis none Brassica rapa A03p060040.1_BraROA R-BRA-5138489 A03p060040.1_BraROA [plastid stroma] R-BRA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119622 Arginine biosynthesis II (acetyl cycle) none Brassica rapa A03p060040.1_BraROA R-BRA-5138489 A03p060040.1_BraROA [plastid stroma] R-BRA-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5633340 Citrulline-nitric oxide cycle none Brassica rapa A03p061190.1_BraROA R-BRA-1127015 A03p061190.1_BraROA [cytosol] R-BRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119334 Ethylene biosynthesis from methionine none Brassica rapa A03p061190.1_BraROA R-BRA-1127015 A03p061190.1_BraROA [cytosol] R-BRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119624 Methionine salvage pathway none Brassica rapa A03p061220.1_BraROA R-BRA-1127523-3 A03p061220.1_BraROA [cytosol] R-BRA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Brassica rapa A03p061530.1_BraROA R-BRA-5632251 A03p061530.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A03p061720.1_BraROA R-BRA-1129867 A03p061720.1_BraROA [chloroplast] R-BRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119494 Tryptophan biosynthesis none Brassica rapa A03p062860.1_BraROA R-BRA-1129547-15 A03p062860.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A03p062860.1_BraROA R-BRA-1129547-15 A03p062860.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A03p062860.1_BraROA R-BRA-1129547-15 A03p062860.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A03p063280.1_BraROA R-BRA-6786999-2 A03p063280.1_BraROA [nucleoplasm] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A03p063390.1_BraROA R-BRA-5633387 A03p063390.1_BraROA [mitochondrial matrix] R-BRA-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119445 Beta-alanine biosynthesis II none Brassica rapa A03p064310.1_BraROA R-BRA-9826615 RERJ1 [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A03p064420.1_BraROA R-BRA-5608161-2 A03p064420.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A03p064600.1_BraROA R-BRA-9920292 A03p064600.1_BraROA [nucleoplasm] R-BRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934108 Short day regulated expression of florigens none Brassica rapa A03p064750.1_BraROA R-BRA-1122463 A03p064750.1_BraROA [cytosol] R-BRA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119321 Glycerol degradation I none Brassica rapa A03p065050.1_BraROA R-BRA-1123296 A03p065050.1_BraROA [chloroplast envelope] R-BRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119402 Phospholipid biosynthesis I none Brassica rapa A03p065840.1_BraROA R-BRA-6788065-2 A03p065840.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A03p066110.1_BraROA R-BRA-1128173 A03p066110.1_BraROA [cytosol] R-BRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119437 Glutathione redox reactions I none Brassica rapa A03p066240.1_BraROA R-BRA-1123797-2 A03p066240.1_BraROA [cytosol] R-BRA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119281 Aspartate biosynthesis I none Brassica rapa A03p066530.1_BraROA R-BRA-1130088-2 A03p066530.1_BraROA [plasma membrane] R-BRA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119314 Cellulose biosynthesis none Brassica rapa A03p067050.1_BraROA R-BRA-1129571-3 A03p067050.1_BraROA [mitochondrion] R-BRA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119365 Lysine degradation II none Brassica rapa A03p067060.1_BraROA R-BRA-1129571-2 A03p067060.1_BraROA [mitochondrion] R-BRA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119365 Lysine degradation II none Brassica rapa A03p067340.1_BraROA R-BRA-1128980-3 A03p067340.1_BraROA [cytosol] R-BRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119586 Cyanate degradation none Brassica rapa A03p067470.1_BraROA R-BRA-9682527 A03p067470.1_BraROA [cytosol] R-BRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119410 Ascorbate biosynthesis none Brassica rapa A03p067670.1_BraROA R-BRA-9639029 A03p067670.1_BraROA [cytosol] R-BRA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119434 Phytic acid biosynthesis (lipid-independent) none Brassica rapa A03p068170.1_BraROA R-BRA-4415007-4 A03p068170.1_BraROA [cytosol] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A03p068170.1_BraROA R-BRA-4415016-4 phospho-A03p068170.1_BraROA [cytosol] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A03p068170.1_BraROA R-BRA-4415007-4 A03p068170.1_BraROA [cytosol] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A03p068570.1_BraROA R-BRA-1125967 A03p068570.1_BraROA [cytosol] R-BRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119316 Phenylpropanoid biosynthesis none Brassica rapa A03p068880.1_BraROA R-BRA-1128707 A03p068880.1_BraROA [cytosol] R-BRA-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Brassica rapa A03p068880.1_BraROA R-BRA-1128707 A03p068880.1_BraROA [cytosol] R-BRA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119370 Sterol biosynthesis none Brassica rapa A03p068880.1_BraROA R-BRA-1128707 A03p068880.1_BraROA [cytosol] R-BRA-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119439 Cholesterol biosynthesis III (via desmosterol) none Brassica rapa A03p068880.1_BraROA R-BRA-1128707 A03p068880.1_BraROA [cytosol] R-BRA-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119559 Cholesterol biosynthesis I none Brassica rapa A03p069210.1_BraROA R-BRA-9618156-2 A03p069210.1_BraROA [plasma membrane] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A03p069920.1_BraROA R-BRA-1129187-3 A03p069920.1_BraROA [cytosol] R-BRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119276 Choline biosynthesis III none Brassica rapa A03p070170.1_BraROA R-BRA-1128613-5 A03p070170.1_BraROA [cytosol] R-BRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119316 Phenylpropanoid biosynthesis none Brassica rapa A03p070370.1_BraROA R-BRA-1129700 A03p070370.1_BraROA [cytosol] R-BRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119610 Biotin biosynthesis II none Brassica rapa A03p070710.1_BraROA R-BRA-9826620-4 HOX12/ OsGT1 [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A03p070710.1_BraROA R-BRA-9826620-4 HOX12/ OsGT1 [nucleoplasm] R-BRA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Brassica rapa A03p070730.1_BraROA R-BRA-5632334-7 A03p070730.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A03p070730.1_BraROA R-BRA-5632197-7 phospho-A03p070730.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A03p070730.1_BraROA R-BRA-5632183-7 phospho-A03p070730.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A03p070730.1_BraROA R-BRA-5632334-7 A03p070730.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A03p071700.1_BraROA R-BRA-9658611 A03p071700.1_BraROA [plastid stroma] R-BRA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119263 Arginine biosynthesis none Brassica rapa A03p071700.1_BraROA R-BRA-9658611 A03p071700.1_BraROA [plastid stroma] R-BRA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119539 Ornithine biosynthesis none Brassica rapa A03p071700.1_BraROA R-BRA-9658611 A03p071700.1_BraROA [plastid stroma] R-BRA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119622 Arginine biosynthesis II (acetyl cycle) none Brassica rapa A03p071810.1_BraROA R-BRA-9035593-3 A03p071810.1_BraROA [cytosol] R-BRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9035605 Regulation of seed size none Brassica rapa A03p071810.1_BraROA R-BRA-9035634-3 A03p071810.1_BraROA [nucleoplasm] R-BRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9035605 Regulation of seed size none Brassica rapa A03p071810.1_BraROA R-BRA-9035593-3 A03p071810.1_BraROA [cytosol] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A03p071810.1_BraROA R-BRA-9035634-3 A03p071810.1_BraROA [nucleoplasm] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A03p072270.1_BraROA R-BRA-1130084-7 A03p072270.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A04g501060.1_BraROA R-BRA-5149632-2 A04g501060.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A04g501440.1_BraROA R-BRA-2672431 A04g501440.1_BraROA [cytosol] R-BRA-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119322 Leucodelphinidin biosynthesis none Brassica rapa A04g501440.1_BraROA R-BRA-2672431 A04g501440.1_BraROA [cytosol] R-BRA-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Brassica rapa A04g501440.1_BraROA R-BRA-1124195 A04g501440.1_BraROA [cytosol] R-BRA-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119531 Flavonoid biosynthesis none Brassica rapa A04g503120.1_BraROA R-BRA-1124939-2 A04g503120.1_BraROA [cytosol] R-BRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119540 Leucine biosynthesis none Brassica rapa A04g504060.1_BraROA R-BRA-5149646-3 A04g504060.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A04g504060.1_BraROA R-BRA-1126652-3 A04g504060.1_BraROA [cytosol] R-BRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119570 Cytosolic glycolysis none Brassica rapa A04g505970.1_BraROA R-BRA-1126400-2 A04g505970.1_BraROA [chloroplast] R-BRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119494 Tryptophan biosynthesis none Brassica rapa A04g506230.1_BraROA R-BRA-1129466 A04g506230.1_BraROA [cytosol] R-BRA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119449 Carotenoid biosynthesis none Brassica rapa A04g506940.1_BraROA R-BRA-4415078-8 A04g506940.1_BraROA [cytosol] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A04g507550.1_BraROA R-BRA-1127173-4 A04g507550.1_BraROA [cytosol] R-BRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119540 Leucine biosynthesis none Brassica rapa A04g507800.1_BraROA R-BRA-9639217-2 A04g507800.1_BraROA [plasma membrane] R-BRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639136 Response to Aluminum stress none Brassica rapa A04g508420.1_BraROA R-BRA-1129184 A04g508420.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A04g508420.1_BraROA R-BRA-1129184 A04g508420.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A04g508420.1_BraROA R-BRA-5606505 A04g508420.1_BraROA [plastid stroma] R-BRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119419 Lysine biosynthesis VI none Brassica rapa A04p000170.1_BraROA R-BRA-1128594-2 A04p000170.1_BraROA [cytosol] R-BRA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119349 S-methylmethionine cycle none Brassica rapa A04p000170.1_BraROA R-BRA-1128594-2 A04p000170.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A04p000440.1_BraROA R-BRA-5679398-4 A04p000440.1_BraROA [cytosol] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A04p000490.1_BraROA R-BRA-5608164-2 A04p000490.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A04p000490.1_BraROA R-BRA-5608164-2 A04p000490.1_BraROA [nucleoplasm] R-BRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030557 Lateral root initiation none Brassica rapa A04p000490.1_BraROA R-BRA-5608164-2 A04p000490.1_BraROA [nucleoplasm] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A04p000490.1_BraROA R-BRA-9658967-2 A04p000490.1_BraROA [cytosol] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A04p000690.1_BraROA R-BRA-9639810-3 A04p000690.1_BraROA [cell wall] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A04p001780.1_BraROA R-BRA-1130247-3 A04p001780.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A04p001970.1_BraROA R-BRA-9924407 EXPB5 [basolateral plasma membrane] R-BRA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924451 Shoot (tiller) formation and regulation of tiller angle none Brassica rapa A04p002350.1_BraROA R-BRA-1129055-2 A04p002350.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A04p002550.1_BraROA R-BRA-9675391-4 A04p002550.1_BraROA [nucleoplasm] R-BRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675508 Root elongation none Brassica rapa A04p002580.1_BraROA R-BRA-1122545-3 A04p002580.1_BraROA [cytosol] R-BRA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119331 Cysteine biosynthesis I none Brassica rapa A04p002680.1_BraROA R-BRA-1125989 A04p002680.1_BraROA [cytosol] R-BRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119438 Secologanin and strictosidine biosynthesis none Brassica rapa A04p003110.1_BraROA R-BRA-1126157-2 A04p003110.1_BraROA [cytosol] R-BRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119460 Isoleucine biosynthesis from threonine none Brassica rapa A04p003110.1_BraROA R-BRA-1126157-2 A04p003110.1_BraROA [cytosol] R-BRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119600 Valine biosynthesis none Brassica rapa A04p003190.1_BraROA R-BRA-5632241-2 A04p003190.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A04p003680.1_BraROA R-BRA-1130036 A04p003680.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119402 Phospholipid biosynthesis I none Brassica rapa A04p003740.1_BraROA R-BRA-5138484 A04p003740.1_BraROA [plastid stroma] R-BRA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119263 Arginine biosynthesis none Brassica rapa A04p003740.1_BraROA R-BRA-5138484 A04p003740.1_BraROA [plastid stroma] R-BRA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119539 Ornithine biosynthesis none Brassica rapa A04p003740.1_BraROA R-BRA-5138484 A04p003740.1_BraROA [plastid stroma] R-BRA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119622 Arginine biosynthesis II (acetyl cycle) none Brassica rapa A04p004040.1_BraROA R-BRA-1129311 A04p004040.1_BraROA [cytosol] R-BRA-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Brassica rapa A04p005100.1_BraROA R-BRA-5149683-3 A04p005100.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A04p005250.1_BraROA R-BRA-1127913-4 A04p005250.1_BraROA [cytosol] R-BRA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119495 Citrulline biosynthesis none Brassica rapa A04p005250.1_BraROA R-BRA-1127913-4 A04p005250.1_BraROA [cytosol] R-BRA-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119631 Proline biosynthesis I none Brassica rapa A04p005410.1_BraROA R-BRA-5149632-3 A04p005410.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A04p006040.1_BraROA R-BRA-1130032-4 A04p006040.1_BraROA [mitochondrial inner membrane] R-BRA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119260 Cardiolipin biosynthesis none Brassica rapa A04p006410.1_BraROA R-BRA-1127299 A04p006410.1_BraROA [cytosol] R-BRA-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119298 Glutathione redox reactions II none Brassica rapa A04p006410.1_BraROA R-BRA-1127299 A04p006410.1_BraROA [cytosol] R-BRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119437 Glutathione redox reactions I none Brassica rapa A04p006730.1_BraROA R-BRA-1127089-2 A04p006730.1_BraROA [cytosol] R-BRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119465 Sucrose biosynthesis none Brassica rapa A04p006740.1_BraROA R-BRA-1126436 A04p006740.1_BraROA [cytosol] R-BRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119615 Mevalonate pathway none Brassica rapa A04p006920.1_BraROA R-BRA-1127082-2 A04p006920.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A04p007660.1_BraROA R-BRA-1130235-5 A04p007660.1_BraROA [cytosol] R-BRA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119261 Salicylate biosynthesis none Brassica rapa A04p007660.1_BraROA R-BRA-1130235-5 A04p007660.1_BraROA [cytosol] R-BRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119418 Suberin biosynthesis none Brassica rapa A04p007660.1_BraROA R-BRA-1130235-5 A04p007660.1_BraROA [cytosol] R-BRA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119582 Phenylpropanoid biosynthesis, initial reactions none Brassica rapa A04p007720.1_BraROA R-BRA-1128678 A04p007720.1_BraROA [cytosol] R-BRA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119292 Cytokinins 7-N-glucoside biosynthesis none Brassica rapa A04p007720.1_BraROA R-BRA-1128678 A04p007720.1_BraROA [cytosol] R-BRA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119375 Cytokinins 9-N-glucoside biosynthesis none Brassica rapa A04p007720.1_BraROA R-BRA-1128678 A04p007720.1_BraROA [cytosol] R-BRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119473 Cytokinins-O-glucoside biosynthesis none Brassica rapa A04p008110.1_BraROA R-BRA-1127922 A04p008110.1_BraROA [cytosol] R-BRA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119370 Sterol biosynthesis none Brassica rapa A04p008730.1_BraROA R-BRA-6788234-2 A04p008730.1_BraROA [cytosol] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A04p008730.1_BraROA R-BRA-1124041-2 A04p008730.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A04p009230.1_BraROA R-BRA-9924379-3 HSFA2D [nucleoplasm] R-BRA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924451 Shoot (tiller) formation and regulation of tiller angle none Brassica rapa A04p009360.1_BraROA R-BRA-9916309-3 CPK3 [plasma membrane] R-BRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9916190 Root angle formation: elongation and curvature response none Brassica rapa A04p009390.1_BraROA R-BRA-1124145 A04p009390.1_BraROA [mitochondrial matrix] R-BRA-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119445 Beta-alanine biosynthesis II none Brassica rapa A04p010470.1_BraROA R-BRA-1129029-5 A04p010470.1_BraROA [cytosol] R-BRA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119501 S-adenosyl-L-methionine cycle none Brassica rapa A04p012930.1_BraROA R-BRA-1129629 A04p012930.1_BraROA [plastid stroma] R-BRA-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119293 Glutamine biosynthesis I none Brassica rapa A04p012930.1_BraROA R-BRA-1129629 A04p012930.1_BraROA [plastid stroma] R-BRA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119443 Ammonia assimilation cycle none Brassica rapa A04p014030.1_BraROA R-BRA-5608169-2 A04p014030.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A04p014500.1_BraROA R-BRA-8854127-3 A04p014500.1_BraROA [cytosol] R-BRA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119556 Choline biosynthesis I none Brassica rapa A04p014930.1_BraROA R-BRA-1125540 A04p014930.1_BraROA [cytosol] R-BRA-1119303 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119303 Pyridoxamine anabolism none Brassica rapa A04p014930.1_BraROA R-BRA-1125540 A04p014930.1_BraROA [cytosol] R-BRA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119534 Pyridoxal 5'-phosphate salvage pathway none Brassica rapa A04p015280.1_BraROA R-BRA-8987531-4 A04p015280.1_BraROA [chloroplast] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A04p015280.1_BraROA R-BRA-1125951-4 A04p015280.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A04p015300.1_BraROA R-BRA-8987531 A04p015300.1_BraROA [chloroplast] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A04p015300.1_BraROA R-BRA-1125951 A04p015300.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A04p015380.1_BraROA R-BRA-8987531-2 A04p015380.1_BraROA [chloroplast] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A04p015380.1_BraROA R-BRA-1125951-2 A04p015380.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A04p015440.1_BraROA R-BRA-5632238-4 A04p015440.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A04p015440.1_BraROA R-BRA-5632238-4 A04p015440.1_BraROA [cytosol] R-BRA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934257 Transition from vegetative to reproductive shoot apical meristem none Brassica rapa A04p015440.1_BraROA R-BRA-9927894-4 A04p015440.1_BraROA [nucleoplasm] R-BRA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934257 Transition from vegetative to reproductive shoot apical meristem none Brassica rapa A04p015440.1_BraROA R-BRA-5632238-4 A04p015440.1_BraROA [cytosol] R-BRA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9609102 Flower development none Brassica rapa A04p015440.1_BraROA R-BRA-5632238-4 A04p015440.1_BraROA [cytosol] R-BRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928831 Severe drought none Brassica rapa A04p015440.1_BraROA R-BRA-9927894-4 A04p015440.1_BraROA [nucleoplasm] R-BRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928831 Severe drought none Brassica rapa A04p015510.1_BraROA R-BRA-1126400 A04p015510.1_BraROA [chloroplast] R-BRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119494 Tryptophan biosynthesis none Brassica rapa A04p016080.1_BraROA R-BRA-9639171 A04p016080.1_BraROA [plant-type vacuole membrane] R-BRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639136 Response to Aluminum stress none Brassica rapa A04p016340.1_BraROA R-BRA-9681886-3 A04p016340.1_BraROA [cytosol] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A04p016820.1_BraROA R-BRA-9766876 A04p016820.1_BraROA [nucleoplasm] R-BRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9766881 TF network involved in salinity response none Brassica rapa A04p016820.1_BraROA R-BRA-9766876 A04p016820.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A04p017950.1_BraROA R-BRA-1127292-2 A04p017950.1_BraROA [plastid stroma] R-BRA-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Brassica rapa A04p018240.1_BraROA R-BRA-1127752 A04p018240.1_BraROA [cytosol] R-BRA-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119417 Stachyose biosynthesis none Brassica rapa A04p018500.1_BraROA R-BRA-9025351 A04p018500.1_BraROA [cytosol] R-BRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119402 Phospholipid biosynthesis I none Brassica rapa A04p018960.1_BraROA R-BRA-1124138 A04p018960.1_BraROA [cytosol] R-BRA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119394 Pantothenate and coenzyme A biosynthesis III none Brassica rapa A04p020480.1_BraROA R-BRA-8987531-3 A04p020480.1_BraROA [chloroplast] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A04p020480.1_BraROA R-BRA-1125951-3 A04p020480.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A04p020880.1_BraROA R-BRA-1127292 A04p020880.1_BraROA [plastid stroma] R-BRA-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Brassica rapa A04p021020.1_BraROA R-BRA-1130235 A04p021020.1_BraROA [cytosol] R-BRA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119261 Salicylate biosynthesis none Brassica rapa A04p021020.1_BraROA R-BRA-1130235 A04p021020.1_BraROA [cytosol] R-BRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119418 Suberin biosynthesis none Brassica rapa A04p021020.1_BraROA R-BRA-1130235 A04p021020.1_BraROA [cytosol] R-BRA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119582 Phenylpropanoid biosynthesis, initial reactions none Brassica rapa A04p021550.1_BraROA R-BRA-1127562-2 A04p021550.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A04p021550.1_BraROA R-BRA-1130466-2 A04p021550.1_BraROA [cytosol] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A04p021780.1_BraROA R-BRA-1129466-2 A04p021780.1_BraROA [cytosol] R-BRA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119449 Carotenoid biosynthesis none Brassica rapa A04p021910.1_BraROA R-BRA-1130308-2 A04p021910.1_BraROA [plastid stroma] R-BRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119430 Chorismate biosynthesis none Brassica rapa A04p022170.1_BraROA R-BRA-1129964 A04p022170.1_BraROA [cytosol] R-BRA-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119378 Myo-inositol biosynthesis none Brassica rapa A04p022170.1_BraROA R-BRA-1129964 A04p022170.1_BraROA [cytosol] R-BRA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119434 Phytic acid biosynthesis (lipid-independent) none Brassica rapa A04p022190.1_BraROA R-BRA-5654756 A04p022190.1_BraROA [cytosol] R-BRA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119281 Aspartate biosynthesis I none Brassica rapa A04p022190.1_BraROA R-BRA-1123648 A04p022190.1_BraROA [plastid] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A04p022190.1_BraROA R-BRA-5631992 A04p022190.1_BraROA [plastid stroma] R-BRA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119553 Asparagine biosynthesis none Brassica rapa A04p022260.1_BraROA R-BRA-1130084-8 A04p022260.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A04p022450.1_BraROA R-BRA-9640777-6 A04p022450.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A04p022450.1_BraROA R-BRA-9640777-6 A04p022450.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A04p022880.1_BraROA R-BRA-1123895-4 A04p022880.1_BraROA [cytosol] R-BRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119334 Ethylene biosynthesis from methionine none Brassica rapa A04p022880.1_BraROA R-BRA-1123895-4 A04p022880.1_BraROA [cytosol] R-BRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119624 Methionine salvage pathway none Brassica rapa A04p023150.1_BraROA R-BRA-8933816 A04p023150.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A04p024380.1_BraROA R-BRA-6788065-4 A04p024380.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A04p025980.1_BraROA R-BRA-1250418-2 A04p025980.1_BraROA [cytosol] R-BRA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119374 Abscisic acid biosynthesis none Brassica rapa A04p025980.1_BraROA R-BRA-1129637-2 A04p025980.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A04p026050.1_BraROA R-BRA-5632111-3 A04p026050.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A04p026050.1_BraROA R-BRA-5632216-3 phospho-A04p026050.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A04p026310.1_BraROA R-BRA-1127065 A04p026310.1_BraROA [cytosol] R-BRA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119304 Putrescine biosynthesis II none Brassica rapa A04p026440.1_BraROA R-BRA-9608694-2 A04p026440.1_BraROA [cytosol] R-BRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928831 Severe drought none Brassica rapa A04p026440.1_BraROA R-BRA-9928774-2 A04p026440.1_BraROA [nucleoplasm] R-BRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928831 Severe drought none Brassica rapa A04p026650.1_BraROA R-BRA-1124560-4 A04p026650.1_BraROA [cytosol] R-BRA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119563 UDP-D-xylose biosynthesis none Brassica rapa A04p026650.1_BraROA R-BRA-9681903-4 A04p026650.1_BraROA [Golgi lumen] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A04p026650.1_BraROA R-BRA-1124560-4 A04p026650.1_BraROA [cytosol] R-BRA-5654894 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5654894 UDP-D-apiose biosynthesis none Brassica rapa A04p026890.1_BraROA R-BRA-1126828 A04p026890.1_BraROA [plastid] R-BRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119403 Removal of superoxide radicals none Brassica rapa A04p027420.1_BraROA R-BRA-1126799-4 A04p027420.1_BraROA [cytosol] R-BRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119428 GDP-D-rhamnose biosynthesis none Brassica rapa A04p027420.1_BraROA R-BRA-1126799-4 A04p027420.1_BraROA [cytosol] R-BRA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119563 UDP-D-xylose biosynthesis none Brassica rapa A04p027420.1_BraROA R-BRA-1126799-4 A04p027420.1_BraROA [cytosol] R-BRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brassica rapa A04p027510.1_BraROA R-BRA-9611510-3 phospho-phosphorylated-SPL11 [plasma membrane] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A04p027510.1_BraROA R-BRA-9611544-3 SPL11 [nucleoplasm] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A04p027510.1_BraROA R-BRA-9611440-3 phospho-phosphorylated-SPL11 [nucleoplasm] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A04p027570.1_BraROA R-BRA-9611528-3 RLCK176 [cytosol] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A04p027570.1_BraROA R-BRA-9611477-3 phospho-phosphorylated-RLCK176 [cytosol] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A04p027890.1_BraROA R-BRA-1127539 A04p027890.1_BraROA [cytosol] R-BRA-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Brassica rapa A04p027890.1_BraROA R-BRA-1127539 A04p027890.1_BraROA [cytosol] R-BRA-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119439 Cholesterol biosynthesis III (via desmosterol) none Brassica rapa A04p027890.1_BraROA R-BRA-1127539 A04p027890.1_BraROA [cytosol] R-BRA-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119559 Cholesterol biosynthesis I none Brassica rapa A04p028130.1_BraROA R-BRA-1125804-3 A04p028130.1_BraROA [cytosol] R-BRA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119300 Glycolipid desaturation none Brassica rapa A04p028650.1_BraROA R-BRA-1127076-4 A04p028650.1_BraROA [cytosol] R-BRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119418 Suberin biosynthesis none Brassica rapa A04p028650.1_BraROA R-BRA-1127076-4 A04p028650.1_BraROA [cytosol] R-BRA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119582 Phenylpropanoid biosynthesis, initial reactions none Brassica rapa A04p028660.1_BraROA R-BRA-1127076-3 A04p028660.1_BraROA [cytosol] R-BRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119418 Suberin biosynthesis none Brassica rapa A04p028660.1_BraROA R-BRA-1127076-3 A04p028660.1_BraROA [cytosol] R-BRA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119582 Phenylpropanoid biosynthesis, initial reactions none Brassica rapa A04p029120.1_BraROA R-BRA-1127161-4 A04p029120.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A04p029140.1_BraROA R-BRA-1127442-2 A04p029140.1_BraROA [cytosol] R-BRA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119281 Aspartate biosynthesis I none Brassica rapa A04p029140.1_BraROA R-BRA-5632001-2 A04p029140.1_BraROA [plastid stroma] R-BRA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119553 Asparagine biosynthesis none Brassica rapa A04p029170.1_BraROA R-BRA-5632139-4 A04p029170.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A04p029650.1_BraROA R-BRA-9927723-2 A04p029650.1_BraROA [nucleoplasm] R-BRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934036 Long day regulated expression of florigens none Brassica rapa A04p030800.1_BraROA R-BRA-8933714 A04p030800.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A04p030900.1_BraROA R-BRA-1124613 A04p030900.1_BraROA [plasma membrane] R-BRA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119314 Cellulose biosynthesis none Brassica rapa A04p031620.1_BraROA R-BRA-9035727-6 A04p031620.1_BraROA [cytosol] R-BRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9035605 Regulation of seed size none Brassica rapa A04p031620.1_BraROA R-BRA-9035692-6 A04p031620.1_BraROA [nucleoplasm] R-BRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9035605 Regulation of seed size none Brassica rapa A04p031670.1_BraROA R-BRA-5608184 A04p031670.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A04p031670.1_BraROA R-BRA-5608184 A04p031670.1_BraROA [nucleoplasm] R-BRA-9675304 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675304 Lateral root emergence none Brassica rapa A04p032560.1_BraROA R-BRA-1127989 A04p032560.1_BraROA [plastid stroma] R-BRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119430 Chorismate biosynthesis none Brassica rapa A04p032970.1_BraROA R-BRA-1127089 A04p032970.1_BraROA [cytosol] R-BRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119465 Sucrose biosynthesis none Brassica rapa A04p033200.1_BraROA R-BRA-9608693-3 A04p033200.1_BraROA [cytosol] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A04p033220.1_BraROA R-BRA-9640739-4 A04p033220.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A04p033410.1_BraROA R-BRA-9930216 ABI5 [nucleoplasm] R-BRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9766881 TF network involved in salinity response none Brassica rapa A04p033940.1_BraROA R-BRA-1130235-2 A04p033940.1_BraROA [cytosol] R-BRA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119261 Salicylate biosynthesis none Brassica rapa A04p033940.1_BraROA R-BRA-1130235-2 A04p033940.1_BraROA [cytosol] R-BRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119418 Suberin biosynthesis none Brassica rapa A04p033940.1_BraROA R-BRA-1130235-2 A04p033940.1_BraROA [cytosol] R-BRA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119582 Phenylpropanoid biosynthesis, initial reactions none Brassica rapa A04p034480.1_BraROA R-BRA-1125698 A04p034480.1_BraROA [cytosol] R-BRA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119436 Peptidoglycan biosynthesis I none Brassica rapa A04p034800.1_BraROA R-BRA-1124269 A04p034800.1_BraROA [cytosol] R-BRA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119456 Brassinosteroid biosynthesis II none Brassica rapa A04p035040.1_BraROA R-BRA-1129539-4 A04p035040.1_BraROA [cytosol] R-BRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119610 Biotin biosynthesis II none Brassica rapa A04p035890.1_BraROA R-BRA-1130202-2 A04p035890.1_BraROA [cytosol] R-BRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119410 Ascorbate biosynthesis none Brassica rapa A04p035900.1_BraROA R-BRA-1127913-3 A04p035900.1_BraROA [cytosol] R-BRA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119495 Citrulline biosynthesis none Brassica rapa A04p035900.1_BraROA R-BRA-1127913-3 A04p035900.1_BraROA [cytosol] R-BRA-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119631 Proline biosynthesis I none Brassica rapa A04p035970.1_BraROA R-BRA-6787181-3 A04p035970.1_BraROA [cytosol] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A04p035980.1_BraROA R-BRA-6787181 A04p035980.1_BraROA [cytosol] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A04p036070.1_BraROA R-BRA-9675860 A04p036070.1_BraROA [nucleoplasm] R-BRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675824 DNA replication Initiation none Brassica rapa A04p036650.1_BraROA R-BRA-9675399 A04p036650.1_BraROA [nucleoplasm] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A04p036980.1_BraROA R-BRA-1126996 A04p036980.1_BraROA [cytosol] R-BRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119316 Phenylpropanoid biosynthesis none Brassica rapa A04p037630.1_BraROA R-BRA-1130084-2 A04p037630.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A04p037770.1_BraROA R-BRA-9675876 A04p037770.1_BraROA [nucleoplasm] R-BRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675782 Maturation none Brassica rapa A04p037770.1_BraROA R-BRA-9675876 A04p037770.1_BraROA [nucleoplasm] R-BRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675815 Leading strand synthesis none Brassica rapa A04p037770.1_BraROA R-BRA-9675876 A04p037770.1_BraROA [nucleoplasm] R-BRA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675885 Lagging strand synthesis none Brassica rapa A04p038010.1_BraROA R-BRA-9658676 A04p038010.1_BraROA [cytosol] R-BRA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119567 Beta-alanine biosynthesis I none Brassica rapa A04p038080.1_BraROA R-BRA-5654840 A04p038080.1_BraROA [nucleoplasm] R-BRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5654828 Strigolactone signaling none Brassica rapa A04p038080.1_BraROA R-BRA-5654840 A04p038080.1_BraROA [nucleoplasm] R-BRA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Brassica rapa A04p038990.1_BraROA R-BRA-1122545-2 A04p038990.1_BraROA [cytosol] R-BRA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119331 Cysteine biosynthesis I none Brassica rapa A04p039240.1_BraROA R-BRA-1129055 A04p039240.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A04p039370.1_BraROA R-BRA-1124520 A04p039370.1_BraROA [cytosol] R-BRA-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119278 PRPP biosynthesis I none Brassica rapa A04p039630.1_BraROA R-BRA-5367777 A04p039630.1_BraROA [plastid stroma] R-BRA-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5367729 Strigolactone biosynthesis none Brassica rapa A04p039780.1_BraROA R-BRA-1128197-2 A04p039780.1_BraROA [plastid stroma] R-BRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119430 Chorismate biosynthesis none Brassica rapa A04p039910.1_BraROA R-BRA-1126602 A04p039910.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A04p039910.1_BraROA R-BRA-1126602 A04p039910.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A04p039910.1_BraROA R-BRA-5606494 A04p039910.1_BraROA [plastid stroma] R-BRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119419 Lysine biosynthesis VI none Brassica rapa A04p040130.1_BraROA R-BRA-1125556-3 A04p040130.1_BraROA [cytosol] R-BRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119410 Ascorbate biosynthesis none Brassica rapa A04p040130.1_BraROA R-BRA-1125556-3 A04p040130.1_BraROA [cytosol] R-BRA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119628 GDP-mannose metabolism none Brassica rapa A04p040450.1_BraROA R-BRA-6787202 A04p040450.1_BraROA [cytosol] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A04p040550.1_BraROA R-BRA-1126671 A04p040550.1_BraROA [cytosol] R-BRA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119534 Pyridoxal 5'-phosphate salvage pathway none Brassica rapa A04p040550.1_BraROA R-BRA-1126671 A04p040550.1_BraROA [cytosol] R-BRA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119594 Pyridoxal 5'-phosphate biosynthesis none Brassica rapa A04p041090.1_BraROA R-BRA-1126830 A04p041090.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A04p041370.1_BraROA R-BRA-1128534-2 A04p041370.1_BraROA [cytosol] R-BRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119437 Glutathione redox reactions I none Brassica rapa A05g503930.1_BraROA R-BRA-1127089-3 A05g503930.1_BraROA [cytosol] R-BRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119465 Sucrose biosynthesis none Brassica rapa A05g508240.1_BraROA R-BRA-1122974-3 A05g508240.1_BraROA [mitochondrial matrix] R-BRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119479 Valine degradation none Brassica rapa A05g509330.1_BraROA R-BRA-1129616 A05g509330.1_BraROA [cytosol] R-BRA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119300 Glycolipid desaturation none Brassica rapa A05g509480.1_BraROA R-BRA-8986695 A05g509480.1_BraROA [endoplasmic reticulum membrane] R-BRA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8986768 Anther and pollen development none Brassica rapa A05g509660.1_BraROA R-BRA-9639088 A05g509660.1_BraROA [plasma membrane] R-BRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639136 Response to Aluminum stress none Brassica rapa A05g509770.1_BraROA R-BRA-9916125 A05g509770.1_BraROA [nucleoplasm] R-BRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9916190 Root angle formation: elongation and curvature response none Brassica rapa A05g509770.1_BraROA R-BRA-9916231 A05g509770.1_BraROA [cytosol] R-BRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9916190 Root angle formation: elongation and curvature response none Brassica rapa A05g509770.1_BraROA R-BRA-9916199 phospho-A05g509770.1_BraROA [cytosol] R-BRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9916190 Root angle formation: elongation and curvature response none Brassica rapa A05g510240.1_BraROA R-BRA-1129816-3 A05g510240.1_BraROA [plastid stroma] R-BRA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119367 Polyisoprenoid biosynthesis none Brassica rapa A05g510240.1_BraROA R-BRA-1129816-3 A05g510240.1_BraROA [plastid stroma] R-BRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119615 Mevalonate pathway none Brassica rapa A05g510310.1_BraROA R-BRA-9639016-2 A05g510310.1_BraROA [cytosol] R-BRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119410 Ascorbate biosynthesis none Brassica rapa A05g510310.1_BraROA R-BRA-9639016-2 A05g510310.1_BraROA [cytosol] R-BRA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119434 Phytic acid biosynthesis (lipid-independent) none Brassica rapa A05g510330.1_BraROA R-BRA-2685731 A05g510330.1_BraROA [cytosol] R-BRA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119580 IAA biosynthesis II none Brassica rapa A05g510380.1_BraROA R-BRA-9916124-4 OsPRX95 [extracellular region] R-BRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119403 Removal of superoxide radicals none Brassica rapa A05g510380.1_BraROA R-BRA-9916124-4 OsPRX95 [extracellular region] R-BRA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9607185 Generation of superoxide radicals none Brassica rapa A05p000950.1_BraROA R-BRA-1128534 A05p000950.1_BraROA [cytosol] R-BRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119437 Glutathione redox reactions I none Brassica rapa A05p002420.1_BraROA R-BRA-6787066 A05p002420.1_BraROA [nucleoplasm] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A05p002550.1_BraROA R-BRA-6787202-2 A05p002550.1_BraROA [cytosol] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A05p002580.1_BraROA R-BRA-8933788 A05p002580.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A05p002910.1_BraROA R-BRA-9675399-2 A05p002910.1_BraROA [nucleoplasm] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A05p003140.1_BraROA R-BRA-1126996-3 A05p003140.1_BraROA [cytosol] R-BRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119316 Phenylpropanoid biosynthesis none Brassica rapa A05p003380.1_BraROA R-BRA-1122326-2 A05p003380.1_BraROA [cytosol] R-BRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119438 Secologanin and strictosidine biosynthesis none Brassica rapa A05p003510.1_BraROA R-BRA-1129311-3 A05p003510.1_BraROA [cytosol] R-BRA-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Brassica rapa A05p004330.1_BraROA R-BRA-5632241 A05p004330.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A05p004670.1_BraROA R-BRA-1123092 A05p004670.1_BraROA [cytosol] R-BRA-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119278 PRPP biosynthesis I none Brassica rapa A05p005000.1_BraROA R-BRA-1124791-2 A05p005000.1_BraROA [cytosol] R-BRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119610 Biotin biosynthesis II none Brassica rapa A05p005290.1_BraROA R-BRA-1122545 A05p005290.1_BraROA [cytosol] R-BRA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119331 Cysteine biosynthesis I none Brassica rapa A05p005330.1_BraROA R-BRA-9675391-2 A05p005330.1_BraROA [nucleoplasm] R-BRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675508 Root elongation none Brassica rapa A05p005350.1_BraROA R-BRA-9639789-2 A05p005350.1_BraROA [plasma membrane] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A05p006100.1_BraROA R-BRA-8933728-3 A05p006100.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A05p006350.1_BraROA R-BRA-9826639 A05p006350.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A05p006570.1_BraROA R-BRA-1130247 A05p006570.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A05p007040.1_BraROA R-BRA-1125556 A05p007040.1_BraROA [cytosol] R-BRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119410 Ascorbate biosynthesis none Brassica rapa A05p007040.1_BraROA R-BRA-1125556 A05p007040.1_BraROA [cytosol] R-BRA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119628 GDP-mannose metabolism none Brassica rapa A05p007600.1_BraROA R-BRA-5654797-2 A05p007600.1_BraROA [nucleoplasm] R-BRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5654828 Strigolactone signaling none Brassica rapa A05p007800.1_BraROA R-BRA-6787181-2 A05p007800.1_BraROA [cytosol] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A05p007810.1_BraROA R-BRA-9918265 ISA1 [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A05p007810.1_BraROA R-BRA-9626527 A05p007810.1_BraROA [plastid stroma] R-BRA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9626305 Regulatory network of nutrient accumulation none Brassica rapa A05p007940.1_BraROA R-BRA-1127913 A05p007940.1_BraROA [cytosol] R-BRA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119495 Citrulline biosynthesis none Brassica rapa A05p007940.1_BraROA R-BRA-1127913 A05p007940.1_BraROA [cytosol] R-BRA-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119631 Proline biosynthesis I none Brassica rapa A05p007960.1_BraROA R-BRA-1130202-3 A05p007960.1_BraROA [cytosol] R-BRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119410 Ascorbate biosynthesis none Brassica rapa A05p009150.1_BraROA R-BRA-1129539 A05p009150.1_BraROA [cytosol] R-BRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119610 Biotin biosynthesis II none Brassica rapa A05p009980.1_BraROA R-BRA-9640701 A05p009980.1_BraROA [nucleoplasm] R-BRA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640882 Assembly of pre-replication complex none Brassica rapa A05p009980.1_BraROA R-BRA-9640701 A05p009980.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A05p010090.1_BraROA R-BRA-9658613 A05p010090.1_BraROA [plastid stroma] R-BRA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119263 Arginine biosynthesis none Brassica rapa A05p010090.1_BraROA R-BRA-9658613 A05p010090.1_BraROA [plastid stroma] R-BRA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119622 Arginine biosynthesis II (acetyl cycle) none Brassica rapa A05p010220.1_BraROA R-BRA-9639217 A05p010220.1_BraROA [plasma membrane] R-BRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639136 Response to Aluminum stress none Brassica rapa A05p010360.1_BraROA R-BRA-9618056-6 A05p010360.1_BraROA [plasma membrane] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A05p010370.1_BraROA R-BRA-9618056-8 A05p010370.1_BraROA [plasma membrane] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A05p010390.1_BraROA R-BRA-5654933 A05p010390.1_BraROA [Golgi lumen] R-BRA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5654909 Xylan biosynthesis none Brassica rapa A05p010420.1_BraROA R-BRA-1130235-7 A05p010420.1_BraROA [cytosol] R-BRA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119261 Salicylate biosynthesis none Brassica rapa A05p010420.1_BraROA R-BRA-1130235-7 A05p010420.1_BraROA [cytosol] R-BRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119418 Suberin biosynthesis none Brassica rapa A05p010420.1_BraROA R-BRA-1130235-7 A05p010420.1_BraROA [cytosol] R-BRA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119582 Phenylpropanoid biosynthesis, initial reactions none Brassica rapa A05p010910.1_BraROA R-BRA-1126955 A05p010910.1_BraROA [plastid] R-BRA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119407 Ureide biosynthesis none Brassica rapa A05p011050.1_BraROA R-BRA-1124067 A05p011050.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A05p011050.1_BraROA R-BRA-9626520 A05p011050.1_BraROA [plastid stroma] R-BRA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9626305 Regulatory network of nutrient accumulation none Brassica rapa A05p011200.1_BraROA R-BRA-9930216-2 ABI5 [nucleoplasm] R-BRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9766881 TF network involved in salinity response none Brassica rapa A05p011230.1_BraROA R-BRA-1123337 A05p011230.1_BraROA [plastid stroma] R-BRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119509 Histidine biosynthesis I none Brassica rapa A05p011450.1_BraROA R-BRA-9640739-3 A05p011450.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A05p011900.1_BraROA R-BRA-8987554 A05p011900.1_BraROA [mitochondrial matrix] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A05p012440.1_BraROA R-BRA-1125489-5 A05p012440.1_BraROA [Golgi membrane] R-BRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119428 GDP-D-rhamnose biosynthesis none Brassica rapa A05p012440.1_BraROA R-BRA-1127743-5 A05p012440.1_BraROA [cytosol] R-BRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119428 GDP-D-rhamnose biosynthesis none Brassica rapa A05p012440.1_BraROA R-BRA-1125489-5 A05p012440.1_BraROA [Golgi membrane] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A05p012440.1_BraROA R-BRA-1125489-5 A05p012440.1_BraROA [Golgi membrane] R-BRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brassica rapa A05p012440.1_BraROA R-BRA-1127743-5 A05p012440.1_BraROA [cytosol] R-BRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brassica rapa A05p012640.1_BraROA R-BRA-9618186-2 A05p012640.1_BraROA [plant-type vacuole membrane] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A05p013400.1_BraROA R-BRA-5608184-2 A05p013400.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A05p013400.1_BraROA R-BRA-5608184-2 A05p013400.1_BraROA [nucleoplasm] R-BRA-9675304 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675304 Lateral root emergence none Brassica rapa A05p013450.1_BraROA R-BRA-9035727 A05p013450.1_BraROA [cytosol] R-BRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9035605 Regulation of seed size none Brassica rapa A05p013450.1_BraROA R-BRA-9035692 A05p013450.1_BraROA [nucleoplasm] R-BRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9035605 Regulation of seed size none Brassica rapa A05p013620.1_BraROA R-BRA-8986682-4 A05p013620.1_BraROA [extracellular region] R-BRA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8986768 Anther and pollen development none Brassica rapa A05p013950.1_BraROA R-BRA-1128385-3 A05p013950.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A05p014310.1_BraROA R-BRA-1124613-2 A05p014310.1_BraROA [plasma membrane] R-BRA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119314 Cellulose biosynthesis none Brassica rapa A05p014520.1_BraROA R-BRA-8933714-2 A05p014520.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A05p014930.1_BraROA R-BRA-1125187-3 A05p014930.1_BraROA [cytosol] R-BRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119276 Choline biosynthesis III none Brassica rapa A05p015130.1_BraROA R-BRA-1125766-2 A05p015130.1_BraROA [cytosol] R-BRA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119557 GA12 biosynthesis none Brassica rapa A05p015740.1_BraROA R-BRA-1124523-2 A05p015740.1_BraROA [cytosol] R-BRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119460 Isoleucine biosynthesis from threonine none Brassica rapa A05p015740.1_BraROA R-BRA-1124523-2 A05p015740.1_BraROA [cytosol] R-BRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119600 Valine biosynthesis none Brassica rapa A05p016060.1_BraROA R-BRA-1123430 A05p016060.1_BraROA [cytosol] R-BRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119437 Glutathione redox reactions I none Brassica rapa A05p016790.1_BraROA R-BRA-5632139-5 A05p016790.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A05p016810.1_BraROA R-BRA-1127442 A05p016810.1_BraROA [cytosol] R-BRA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119281 Aspartate biosynthesis I none Brassica rapa A05p016810.1_BraROA R-BRA-5632001 A05p016810.1_BraROA [plastid stroma] R-BRA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119553 Asparagine biosynthesis none Brassica rapa A05p017230.1_BraROA R-BRA-9675399-3 A05p017230.1_BraROA [nucleoplasm] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A05p017590.1_BraROA R-BRA-1125804-2 A05p017590.1_BraROA [cytosol] R-BRA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119300 Glycolipid desaturation none Brassica rapa A05p017640.1_BraROA R-BRA-5654797 A05p017640.1_BraROA [nucleoplasm] R-BRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5654828 Strigolactone signaling none Brassica rapa A05p018000.1_BraROA R-BRA-9640689-2 A05p018000.1_BraROA [nucleoplasm] R-BRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675782 Maturation none Brassica rapa A05p018000.1_BraROA R-BRA-9640689-2 A05p018000.1_BraROA [nucleoplasm] R-BRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675815 Leading strand synthesis none Brassica rapa A05p018000.1_BraROA R-BRA-9640689-2 A05p018000.1_BraROA [nucleoplasm] R-BRA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675885 Lagging strand synthesis none Brassica rapa A05p018240.1_BraROA R-BRA-4415078-4 A05p018240.1_BraROA [cytosol] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A05p018450.1_BraROA R-BRA-1128815-3 A05p018450.1_BraROA [cytosol] R-BRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119452 Galactose degradation II none Brassica rapa A05p018450.1_BraROA R-BRA-1128815-3 A05p018450.1_BraROA [cytosol] R-BRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119465 Sucrose biosynthesis none Brassica rapa A05p018750.1_BraROA R-BRA-1129547-18 A05p018750.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A05p018750.1_BraROA R-BRA-1129547-18 A05p018750.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A05p018750.1_BraROA R-BRA-1129547-18 A05p018750.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A05p019590.1_BraROA R-BRA-1125187-2 A05p019590.1_BraROA [cytosol] R-BRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119276 Choline biosynthesis III none Brassica rapa A05p019860.1_BraROA R-BRA-1127723-2 A05p019860.1_BraROA [cytosol] R-BRA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119331 Cysteine biosynthesis I none Brassica rapa A05p021010.1_BraROA R-BRA-9930197-2 MPK8 [nucleoplasm] R-BRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9766881 TF network involved in salinity response none Brassica rapa A05p021040.1_BraROA R-BRA-1126513 A05p021040.1_BraROA [cytosol] R-BRA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119332 Jasmonic acid biosynthesis none Brassica rapa A05p021290.1_BraROA R-BRA-1128071 A05p021290.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A05p021650.1_BraROA R-BRA-1129926 A05p021650.1_BraROA [cytosol] R-BRA-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Brassica rapa A05p021910.1_BraROA R-BRA-1125906-2 A05p021910.1_BraROA [cytosol] R-BRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119276 Choline biosynthesis III none Brassica rapa A05p022680.1_BraROA R-BRA-2685730-2 A05p022680.1_BraROA [cytosol] R-BRA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119580 IAA biosynthesis II none Brassica rapa A05p022750.1_BraROA R-BRA-5632264-5 A05p022750.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A05p022780.1_BraROA R-BRA-1125406 A05p022780.1_BraROA [cytosol] R-BRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119418 Suberin biosynthesis none Brassica rapa A05p022790.1_BraROA R-BRA-9675354-3 A05p022790.1_BraROA [nucleoplasm] R-BRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675508 Root elongation none Brassica rapa A05p022790.1_BraROA R-BRA-9675335-3 A05p022790.1_BraROA [mitochondrial matrix] R-BRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675508 Root elongation none Brassica rapa A05p022850.1_BraROA R-BRA-1126034-4 A05p022850.1_BraROA [cytosol] R-BRA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119534 Pyridoxal 5'-phosphate salvage pathway none Brassica rapa A05p022850.1_BraROA R-BRA-1126034-4 A05p022850.1_BraROA [cytosol] R-BRA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119594 Pyridoxal 5'-phosphate biosynthesis none Brassica rapa A05p022950.1_BraROA R-BRA-8868904 A05p022950.1_BraROA [endoplasmic reticulum membrane] R-BRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8868949 Intracellular auxin transport none Brassica rapa A05p023100.1_BraROA R-BRA-9639088-3 A05p023100.1_BraROA [plasma membrane] R-BRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639136 Response to Aluminum stress none Brassica rapa A05p023940.1_BraROA R-BRA-1126542 A05p023940.1_BraROA [cytosol] R-BRA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119523 Tetrahydrofolate biosynthesis II none Brassica rapa A05p023940.1_BraROA R-BRA-1126542 A05p023940.1_BraROA [cytosol] R-BRA-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119617 Folate polyglutamylation I none Brassica rapa A05p023960.1_BraROA R-BRA-1127928-3 A05p023960.1_BraROA [cytosol] R-BRA-1119595 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119595 Mannose degradation none Brassica rapa A05p023960.1_BraROA R-BRA-1127928-3 A05p023960.1_BraROA [cytosol] R-BRA-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119601 Trehalose degradation II none Brassica rapa A05p023960.1_BraROA R-BRA-1127928-3 A05p023960.1_BraROA [cytosol] R-BRA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119628 GDP-mannose metabolism none Brassica rapa A05p024010.1_BraROA R-BRA-1123867-2 A05p024010.1_BraROA [cytosol] R-BRA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119370 Sterol biosynthesis none Brassica rapa A05p025050.1_BraROA R-BRA-1130456-2 A05p025050.1_BraROA [plastid stroma] R-BRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119430 Chorismate biosynthesis none Brassica rapa A05p027110.1_BraROA R-BRA-8854121-3 A05p027110.1_BraROA [cytosol] R-BRA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119556 Choline biosynthesis I none Brassica rapa A05p031050.1_BraROA R-BRA-9675481 A05p031050.1_BraROA [cytosol] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A05p031370.1_BraROA R-BRA-1122541-2 A05p031370.1_BraROA [cytosol] R-BRA-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Brassica rapa A05p031370.1_BraROA R-BRA-1122541-2 A05p031370.1_BraROA [cytosol] R-BRA-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Brassica rapa A05p032140.1_BraROA R-BRA-9916305 A05p032140.1_BraROA [nucleoplasm] R-BRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9916190 Root angle formation: elongation and curvature response none Brassica rapa A05p032800.1_BraROA R-BRA-9918210 granule-bound starch synthase 1 (GBSSI, or Waxy) [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A05p032800.1_BraROA R-BRA-9918222 A05p032800.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A05p032800.1_BraROA R-BRA-9626344 A05p032800.1_BraROA [plastid stroma] R-BRA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9626305 Regulatory network of nutrient accumulation none Brassica rapa A05p033850.1_BraROA R-BRA-1122783-2 A05p033850.1_BraROA [chloroplast stroma] R-BRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119402 Phospholipid biosynthesis I none Brassica rapa A05p034150.1_BraROA R-BRA-5149678-2 A05p034150.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A05p034230.1_BraROA R-BRA-9618197 A05p034230.1_BraROA [plasma membrane] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A05p034260.1_BraROA R-BRA-9618197-5 A05p034260.1_BraROA [plasma membrane] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A05p034360.1_BraROA R-BRA-1123596-2 A05p034360.1_BraROA [plastid stroma] R-BRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119509 Histidine biosynthesis I none Brassica rapa A05p034570.1_BraROA R-BRA-1122892-5 A05p034570.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A05p034570.1_BraROA R-BRA-1122892-5 A05p034570.1_BraROA [nucleoplasm] R-BRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030557 Lateral root initiation none Brassica rapa A05p034570.1_BraROA R-BRA-1122892-5 A05p034570.1_BraROA [nucleoplasm] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A05p034820.1_BraROA R-BRA-1128257-4 A05p034820.1_BraROA [plastid stroma] R-BRA-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119529 Sulfate activation for sulfonation none Brassica rapa A05p034950.1_BraROA R-BRA-4415078-5 A05p034950.1_BraROA [cytosol] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A05p035110.1_BraROA R-BRA-1128594 A05p035110.1_BraROA [cytosol] R-BRA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119349 S-methylmethionine cycle none Brassica rapa A05p035110.1_BraROA R-BRA-1128594 A05p035110.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A05p035360.1_BraROA R-BRA-1125584-2 A05p035360.1_BraROA [plastid stroma] R-BRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119509 Histidine biosynthesis I none Brassica rapa A05p035800.1_BraROA R-BRA-9026148 A05p035800.1_BraROA [mitochondrion] R-BRA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119458 Glutamate degradation none Brassica rapa A05p035800.1_BraROA R-BRA-1130288 A05p035800.1_BraROA [cytosol] R-BRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119610 Biotin biosynthesis II none Brassica rapa A05p036530.1_BraROA R-BRA-9611549 phospho-phosphorylated-CERK1 [plasma membrane] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A05p036980.1_BraROA R-BRA-1125406-2 A05p036980.1_BraROA [cytosol] R-BRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119418 Suberin biosynthesis none Brassica rapa A05p037130.1_BraROA R-BRA-1126034-2 A05p037130.1_BraROA [cytosol] R-BRA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119534 Pyridoxal 5'-phosphate salvage pathway none Brassica rapa A05p037130.1_BraROA R-BRA-1126034-2 A05p037130.1_BraROA [cytosol] R-BRA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119594 Pyridoxal 5'-phosphate biosynthesis none Brassica rapa A05p038040.1_BraROA R-BRA-1122403 A05p038040.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A05p038770.1_BraROA R-BRA-1127928-4 A05p038770.1_BraROA [cytosol] R-BRA-1119595 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119595 Mannose degradation none Brassica rapa A05p038770.1_BraROA R-BRA-1127928-4 A05p038770.1_BraROA [cytosol] R-BRA-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119601 Trehalose degradation II none Brassica rapa A05p038770.1_BraROA R-BRA-1127928-4 A05p038770.1_BraROA [cytosol] R-BRA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119628 GDP-mannose metabolism none Brassica rapa A05p038880.1_BraROA R-BRA-5632121-2 A05p038880.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A05p039370.1_BraROA R-BRA-9639111 A05p039370.1_BraROA [plasma membrane] R-BRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639136 Response to Aluminum stress none Brassica rapa A05p039570.1_BraROA R-BRA-1125967-2 A05p039570.1_BraROA [cytosol] R-BRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119316 Phenylpropanoid biosynthesis none Brassica rapa A05p039740.1_BraROA R-BRA-9928801-2 A05p039740.1_BraROA [nucleoplasm] R-BRA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928995 Drought escape (DE) via ABA-dependent pathway none Brassica rapa A05p039780.1_BraROA R-BRA-1126380-2 A05p039780.1_BraROA [cytosol] R-BRA-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119609 Phaseic acid biosynthesis none Brassica rapa A05p039790.1_BraROA R-BRA-9025430-3 A05p039790.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119325 Sphingolipid metabolism none Brassica rapa A05p040220.1_BraROA R-BRA-1129208 A05p040220.1_BraROA [chloroplast envelope] R-BRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119402 Phospholipid biosynthesis I none Brassica rapa A05p041500.1_BraROA R-BRA-8854127-2 A05p041500.1_BraROA [cytosol] R-BRA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119556 Choline biosynthesis I none Brassica rapa A05p041710.1_BraROA R-BRA-1125564-2 A05p041710.1_BraROA [cytosol] R-BRA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119291 Nitrate assimilation none Brassica rapa A05p041710.1_BraROA R-BRA-1125564-2 A05p041710.1_BraROA [cytosol] R-BRA-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119293 Glutamine biosynthesis I none Brassica rapa A05p041710.1_BraROA R-BRA-1125564-2 A05p041710.1_BraROA [cytosol] R-BRA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119443 Ammonia assimilation cycle none Brassica rapa A05p041740.1_BraROA R-BRA-9658702-2 A05p041740.1_BraROA [plastid stroma] R-BRA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119297 Beta-alanine biosynthesis III none Brassica rapa A05p041790.1_BraROA R-BRA-1122843-2 A05p041790.1_BraROA [cytosol] R-BRA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119458 Glutamate degradation none Brassica rapa A05p041960.1_BraROA R-BRA-1129914-2 A05p041960.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A05p042200.1_BraROA R-BRA-8986605-2 A05p042200.1_BraROA [mitochondrial matrix] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A05p042200.1_BraROA R-BRA-1124620-2 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-BRA-1119351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119351 Mitochondrial pyruvate metabolism none Brassica rapa A05p042200.1_BraROA R-BRA-1124620-2 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A05p042390.1_BraROA R-BRA-8933856 A05p042390.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A05p042390.1_BraROA R-BRA-8933748 A05p042390.1_BraROA [cytosol] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A05p042390.1_BraROA R-BRA-8933856 A05p042390.1_BraROA [nucleoplasm] R-BRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934036 Long day regulated expression of florigens none Brassica rapa A05p042390.1_BraROA R-BRA-8933856 A05p042390.1_BraROA [nucleoplasm] R-BRA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928995 Drought escape (DE) via ABA-dependent pathway none Brassica rapa A05p042540.1_BraROA R-BRA-5632301-2 A05p042540.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A05p042540.1_BraROA R-BRA-5632301-2 A05p042540.1_BraROA [nucleoplasm] R-BRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5654828 Strigolactone signaling none Brassica rapa A05p042540.1_BraROA R-BRA-5632301-2 A05p042540.1_BraROA [nucleoplasm] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A05p042780.1_BraROA R-BRA-1125997-5 A05p042780.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A05p042780.1_BraROA R-BRA-1125997-5 A05p042780.1_BraROA [nucleoplasm] R-BRA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030680 Crown root development none Brassica rapa A05p043190.1_BraROA R-BRA-5654750 A05p043190.1_BraROA [cytosol] R-BRA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119393 Asparagine degradation I none Brassica rapa A05p043460.1_BraROA R-BRA-1125906 A05p043460.1_BraROA [cytosol] R-BRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119276 Choline biosynthesis III none Brassica rapa A05p044880.1_BraROA R-BRA-8987473-2 A05p044880.1_BraROA [peroxisomal matrix] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A05p044880.1_BraROA R-BRA-1124984-2 A05p044880.1_BraROA [cytosol] R-BRA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119596 Glutamate biosynthesis I none Brassica rapa A05p045510.1_BraROA R-BRA-5679401-3 A05p045510.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A05p046740.1_BraROA R-BRA-5149643 A05p046740.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A05p046970.1_BraROA R-BRA-9684723-4 A05p046970.1_BraROA [cytosol] R-BRA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9609102 Flower development none Brassica rapa A05p047040.1_BraROA R-BRA-9916302-3 A05p047040.1_BraROA [nucleoplasm] R-BRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9916190 Root angle formation: elongation and curvature response none Brassica rapa A05p047120.1_BraROA R-BRA-9640763-2 A05p047120.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A05p047120.1_BraROA R-BRA-9640885-2 phospho-A05p047120.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A05p047150.1_BraROA R-BRA-6788172 A05p047150.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A05p047340.1_BraROA R-BRA-1124598 A05p047340.1_BraROA [cytosol] R-BRA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119300 Glycolipid desaturation none Brassica rapa A05p047510.1_BraROA R-BRA-8986767 A05p047510.1_BraROA [plastid] R-BRA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8986768 Anther and pollen development none Brassica rapa A05p047760.1_BraROA R-BRA-1127625-3 A05p047760.1_BraROA [cytosol] R-BRA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119265 Tetrahydrofolate biosynthesis I none Brassica rapa A05p047760.1_BraROA R-BRA-1127625-3 A05p047760.1_BraROA [cytosol] R-BRA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119523 Tetrahydrofolate biosynthesis II none Brassica rapa A05p047770.1_BraROA R-BRA-1127625-2 A05p047770.1_BraROA [cytosol] R-BRA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119265 Tetrahydrofolate biosynthesis I none Brassica rapa A05p047770.1_BraROA R-BRA-1127625-2 A05p047770.1_BraROA [cytosol] R-BRA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119523 Tetrahydrofolate biosynthesis II none Brassica rapa A05p048140.1_BraROA R-BRA-4415078-2 A05p048140.1_BraROA [cytosol] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A05p048190.1_BraROA R-BRA-9681885-5 A05p048190.1_BraROA [Golgi membrane] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A05p048310.1_BraROA R-BRA-1129616-3 A05p048310.1_BraROA [cytosol] R-BRA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119300 Glycolipid desaturation none Brassica rapa A05p048510.1_BraROA R-BRA-1129811 A05p048510.1_BraROA [mitochondrion] R-BRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119403 Removal of superoxide radicals none Brassica rapa A05p048560.1_BraROA R-BRA-1123087-3 A05p048560.1_BraROA [plasma membrane] R-BRA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119314 Cellulose biosynthesis none Brassica rapa A05p049010.1_BraROA R-BRA-1125631-3 A05p049010.1_BraROA [cytosol] R-BRA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119321 Glycerol degradation I none Brassica rapa A05p049040.1_BraROA R-BRA-1130235-6 A05p049040.1_BraROA [cytosol] R-BRA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119261 Salicylate biosynthesis none Brassica rapa A05p049040.1_BraROA R-BRA-1130235-6 A05p049040.1_BraROA [cytosol] R-BRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119418 Suberin biosynthesis none Brassica rapa A05p049040.1_BraROA R-BRA-1130235-6 A05p049040.1_BraROA [cytosol] R-BRA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119582 Phenylpropanoid biosynthesis, initial reactions none Brassica rapa A05p049240.1_BraROA R-BRA-1127031-3 A05p049240.1_BraROA [cytosol] R-BRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119460 Isoleucine biosynthesis from threonine none Brassica rapa A05p049470.1_BraROA R-BRA-1129851-2 A05p049470.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A05p049470.1_BraROA R-BRA-1129851-2 A05p049470.1_BraROA [mitochondrial matrix] R-BRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119540 Leucine biosynthesis none Brassica rapa A05p050230.1_BraROA R-BRA-9681895 A05p050230.1_BraROA [Golgi membrane] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A05p050540.1_BraROA R-BRA-9639789-3 A05p050540.1_BraROA [plasma membrane] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A05p051350.1_BraROA R-BRA-1129507-3 A05p051350.1_BraROA [cytosol] R-BRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119452 Galactose degradation II none Brassica rapa A05p051590.1_BraROA R-BRA-1127695-2 A05p051590.1_BraROA [plastid stroma] R-BRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119430 Chorismate biosynthesis none Brassica rapa A05p052480.1_BraROA R-BRA-1122892-2 A05p052480.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A05p052480.1_BraROA R-BRA-1122892-2 A05p052480.1_BraROA [nucleoplasm] R-BRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030557 Lateral root initiation none Brassica rapa A05p052480.1_BraROA R-BRA-1122892-2 A05p052480.1_BraROA [nucleoplasm] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A05p052550.1_BraROA R-BRA-1127705-2 A05p052550.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A05p052600.1_BraROA R-BRA-1125038 A05p052600.1_BraROA [plastid stroma] R-BRA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119449 Carotenoid biosynthesis none Brassica rapa A05p052910.1_BraROA R-BRA-5679398-3 A05p052910.1_BraROA [cytosol] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A05p053280.1_BraROA R-BRA-1128298 A05p053280.1_BraROA [cytosol] R-BRA-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119271 Threonine degradation none Brassica rapa A05p053280.1_BraROA R-BRA-1128298 A05p053280.1_BraROA [cytosol] R-BRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119610 Biotin biosynthesis II none Brassica rapa A05p053560.1_BraROA R-BRA-1122785-2 A05p053560.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A05p053560.1_BraROA R-BRA-1126726-2 A05p053560.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A05p053560.1_BraROA R-BRA-1122785-2 A05p053560.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A05p053560.1_BraROA R-BRA-1126726-2 A05p053560.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A05p053560.1_BraROA R-BRA-1122785-2 A05p053560.1_BraROA [cytosol] R-BRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119570 Cytosolic glycolysis none Brassica rapa A05p054030.1_BraROA R-BRA-9924413 WOX6 [nucleoplasm] R-BRA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924451 Shoot (tiller) formation and regulation of tiller angle none Brassica rapa A05p054570.1_BraROA R-BRA-1126531-2 A05p054570.1_BraROA [cytosol] R-BRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119410 Ascorbate biosynthesis none Brassica rapa A05p054570.1_BraROA R-BRA-1126531-2 A05p054570.1_BraROA [cytosol] R-BRA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119628 GDP-mannose metabolism none Brassica rapa A05p054750.1_BraROA R-BRA-9681910-6 A05p054750.1_BraROA [Golgi membrane] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A05p055070.1_BraROA R-BRA-1130101-2 A05p055070.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A05p055080.1_BraROA R-BRA-9916124-2 OsPRX95 [extracellular region] R-BRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119403 Removal of superoxide radicals none Brassica rapa A05p055080.1_BraROA R-BRA-9916124-2 OsPRX95 [extracellular region] R-BRA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9607185 Generation of superoxide radicals none Brassica rapa A05p055140.1_BraROA R-BRA-4752546 A05p055140.1_BraROA [plastid stroma] R-BRA-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119498 Phylloquinone biosynthesis none Brassica rapa A05p055350.1_BraROA R-BRA-1130327-6 A05p055350.1_BraROA [cytosol] R-BRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119586 Cyanate degradation none Brassica rapa A06g500040.1_BraROA R-BRA-1124813-2 A06g500040.1_BraROA [mitochondrial matrix] R-BRA-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119337 Proline degradation none Brassica rapa A06g500040.1_BraROA R-BRA-8986570-2 A06g500040.1_BraROA [mitochondrial matrix] R-BRA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119365 Lysine degradation II none Brassica rapa A06g500040.1_BraROA R-BRA-9658682-2 A06g500040.1_BraROA [cytosol] R-BRA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119567 Beta-alanine biosynthesis I none Brassica rapa A06g502110.1_BraROA R-BRA-9607102-2 A06g502110.1_BraROA [mitochondrion] R-BRA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9607185 Generation of superoxide radicals none Brassica rapa A06g502570.1_BraROA R-BRA-2960195-3 A06g502570.1_BraROA [cytosol] R-BRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119410 Ascorbate biosynthesis none Brassica rapa A06g502570.1_BraROA R-BRA-2960195-3 A06g502570.1_BraROA [cytosol] R-BRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119570 Cytosolic glycolysis none Brassica rapa A06g502650.1_BraROA R-BRA-1127899 A06g502650.1_BraROA [cytosol] R-BRA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119370 Sterol biosynthesis none Brassica rapa A06g505320.1_BraROA R-BRA-9826691-4 A06g505320.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A06g506640.1_BraROA R-BRA-9025471-3 A06g506640.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119325 Sphingolipid metabolism none Brassica rapa A06g506640.1_BraROA R-BRA-1127934-3 A06g506640.1_BraROA [cytosol] R-BRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119610 Biotin biosynthesis II none Brassica rapa A06g507480.1_BraROA R-BRA-1122351 A06g507480.1_BraROA [cytosol] R-BRA-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119354 Asparagine biosynthesis III none Brassica rapa A06g507480.1_BraROA R-BRA-5633281 A06g507480.1_BraROA [cytosol] R-BRA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119495 Citrulline biosynthesis none Brassica rapa A06g507480.1_BraROA R-BRA-1122351 A06g507480.1_BraROA [cytosol] R-BRA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119553 Asparagine biosynthesis none Brassica rapa A06g508650.1_BraROA R-BRA-1129924 A06g508650.1_BraROA [cytosol] R-BRA-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119342 Gamma-glutamyl cycle none Brassica rapa A06g508650.1_BraROA R-BRA-1129924 A06g508650.1_BraROA [cytosol] R-BRA-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119483 Glutathione biosynthesis none Brassica rapa A06g508980.1_BraROA R-BRA-6787262-2 A06g508980.1_BraROA [nucleoplasm] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A06p000140.1_BraROA R-BRA-1127723-3 A06p000140.1_BraROA [cytosol] R-BRA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119331 Cysteine biosynthesis I none Brassica rapa A06p000680.1_BraROA R-BRA-1124786 A06p000680.1_BraROA [cytosol] R-BRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119276 Choline biosynthesis III none Brassica rapa A06p000740.1_BraROA R-BRA-1128322 A06p000740.1_BraROA [cytosol] R-BRA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119384 NAD biosynthesis I (from aspartate) none Brassica rapa A06p001480.1_BraROA R-BRA-9612372 A06p001480.1_BraROA [mitochondrial matrix] R-BRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119612 Cysteine degradation none Brassica rapa A06p001530.1_BraROA R-BRA-9930197-3 MPK8 [nucleoplasm] R-BRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9766881 TF network involved in salinity response none Brassica rapa A06p001670.1_BraROA R-BRA-1128071-3 A06p001670.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A06p001730.1_BraROA R-BRA-9035727-4 A06p001730.1_BraROA [cytosol] R-BRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9035605 Regulation of seed size none Brassica rapa A06p001730.1_BraROA R-BRA-9035692-4 A06p001730.1_BraROA [nucleoplasm] R-BRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9035605 Regulation of seed size none Brassica rapa A06p002390.1_BraROA R-BRA-1250417-2 A06p002390.1_BraROA [cytosol] R-BRA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119374 Abscisic acid biosynthesis none Brassica rapa A06p002640.1_BraROA R-BRA-1125997-4 A06p002640.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A06p002640.1_BraROA R-BRA-1125997-4 A06p002640.1_BraROA [nucleoplasm] R-BRA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030680 Crown root development none Brassica rapa A06p002720.1_BraROA R-BRA-2685730 A06p002720.1_BraROA [cytosol] R-BRA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119580 IAA biosynthesis II none Brassica rapa A06p002790.1_BraROA R-BRA-5632264-3 A06p002790.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A06p003750.1_BraROA R-BRA-1126542-2 A06p003750.1_BraROA [cytosol] R-BRA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119523 Tetrahydrofolate biosynthesis II none Brassica rapa A06p003750.1_BraROA R-BRA-1126542-2 A06p003750.1_BraROA [cytosol] R-BRA-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119617 Folate polyglutamylation I none Brassica rapa A06p003760.1_BraROA R-BRA-1127928 A06p003760.1_BraROA [cytosol] R-BRA-1119595 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119595 Mannose degradation none Brassica rapa A06p003760.1_BraROA R-BRA-1127928 A06p003760.1_BraROA [cytosol] R-BRA-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119601 Trehalose degradation II none Brassica rapa A06p003760.1_BraROA R-BRA-1127928 A06p003760.1_BraROA [cytosol] R-BRA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119628 GDP-mannose metabolism none Brassica rapa A06p003770.1_BraROA R-BRA-1123943 A06p003770.1_BraROA [plastid] R-BRA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119365 Lysine degradation II none Brassica rapa A06p003990.1_BraROA R-BRA-1122974-6 A06p003990.1_BraROA [mitochondrial matrix] R-BRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119479 Valine degradation none Brassica rapa A06p004370.1_BraROA R-BRA-9928801-4 A06p004370.1_BraROA [nucleoplasm] R-BRA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928995 Drought escape (DE) via ABA-dependent pathway none Brassica rapa A06p005130.1_BraROA R-BRA-8854127-4 A06p005130.1_BraROA [cytosol] R-BRA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119556 Choline biosynthesis I none Brassica rapa A06p005250.1_BraROA R-BRA-1125564-4 A06p005250.1_BraROA [cytosol] R-BRA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119291 Nitrate assimilation none Brassica rapa A06p005250.1_BraROA R-BRA-1125564-4 A06p005250.1_BraROA [cytosol] R-BRA-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119293 Glutamine biosynthesis I none Brassica rapa A06p005250.1_BraROA R-BRA-1125564-4 A06p005250.1_BraROA [cytosol] R-BRA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119443 Ammonia assimilation cycle none Brassica rapa A06p005570.1_BraROA R-BRA-8986605 A06p005570.1_BraROA [mitochondrial matrix] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A06p005570.1_BraROA R-BRA-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-BRA-1119351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119351 Mitochondrial pyruvate metabolism none Brassica rapa A06p005570.1_BraROA R-BRA-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A06p005580.1_BraROA R-BRA-1130327-9 A06p005580.1_BraROA [cytosol] R-BRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119586 Cyanate degradation none Brassica rapa A06p005590.1_BraROA R-BRA-1130327-8 A06p005590.1_BraROA [cytosol] R-BRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119586 Cyanate degradation none Brassica rapa A06p006080.1_BraROA R-BRA-9675845-2 A06p006080.1_BraROA [nucleoplasm] R-BRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675782 Maturation none Brassica rapa A06p006150.1_BraROA R-BRA-1124560-2 A06p006150.1_BraROA [cytosol] R-BRA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119563 UDP-D-xylose biosynthesis none Brassica rapa A06p006150.1_BraROA R-BRA-9681903-2 A06p006150.1_BraROA [Golgi lumen] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A06p006150.1_BraROA R-BRA-1124560-2 A06p006150.1_BraROA [cytosol] R-BRA-5654894 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5654894 UDP-D-apiose biosynthesis none Brassica rapa A06p006180.1_BraROA R-BRA-9645938 A06p006180.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A06p006180.1_BraROA R-BRA-9645938 A06p006180.1_BraROA [nucleoplasm] R-BRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675824 DNA replication Initiation none Brassica rapa A06p006260.1_BraROA R-BRA-6787863-2 A06p006260.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A06p006390.1_BraROA R-BRA-9826669 OsYABBY6 [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A06p006520.1_BraROA R-BRA-1128298-3 A06p006520.1_BraROA [cytosol] R-BRA-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119271 Threonine degradation none Brassica rapa A06p006520.1_BraROA R-BRA-1128298-3 A06p006520.1_BraROA [cytosol] R-BRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119610 Biotin biosynthesis II none Brassica rapa A06p006970.1_BraROA R-BRA-9025712-3 A06p006970.1_BraROA [cytosol] R-BRA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9025754 Mugineic acid biosynthesis none Brassica rapa A06p007290.1_BraROA R-BRA-8933842 A06p007290.1_BraROA [cytosol] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A06p007290.1_BraROA R-BRA-8933843 A06p007290.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A06p007520.1_BraROA R-BRA-1128263-2 A06p007520.1_BraROA [plastid stroma] R-BRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119509 Histidine biosynthesis I none Brassica rapa A06p007860.1_BraROA R-BRA-1122974 A06p007860.1_BraROA [mitochondrial matrix] R-BRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119479 Valine degradation none Brassica rapa A06p008270.1_BraROA R-BRA-5632120-3 A06p008270.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A06p008650.1_BraROA R-BRA-1127753 A06p008650.1_BraROA [cytosol] R-BRA-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119278 PRPP biosynthesis I none Brassica rapa A06p009080.1_BraROA R-BRA-9611469 phospho-phosphorylated-SDS2 [plasma membrane] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A06p009080.1_BraROA R-BRA-9611553 ubiquitinated-SDS2 [cytosol] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A06p009490.1_BraROA R-BRA-1127243-2 A06p009490.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A06p009490.1_BraROA R-BRA-9918268-2 soluble Starch Synthase (SSIIIA/SSIII-2) [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A06p009710.1_BraROA R-BRA-9826681 EREBP129 [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A06p010080.1_BraROA R-BRA-1127873-2 A06p010080.1_BraROA [plastid stroma] R-BRA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119424 Plastid glycolysis none Brassica rapa A06p010080.1_BraROA R-BRA-1127873-2 A06p010080.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A06p010100.1_BraROA R-BRA-8879006-3 A06p010100.1_BraROA [nucleoplasm] R-BRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8879007 Response to cold temperature none Brassica rapa A06p010190.1_BraROA R-BRA-1130394-4 A06p010190.1_BraROA [cytosol] R-BRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119452 Galactose degradation II none Brassica rapa A06p010300.1_BraROA R-BRA-8879029-4 DREB1G [nucleoplasm] R-BRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8879007 Response to cold temperature none Brassica rapa A06p010300.1_BraROA R-BRA-8879071-4 CBF1 homolog [nucleoplasm] R-BRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8879007 Response to cold temperature none Brassica rapa A06p010300.1_BraROA R-BRA-8879085-4 A06p010300.1_BraROA [nucleoplasm] R-BRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8879007 Response to cold temperature none Brassica rapa A06p010330.1_BraROA R-BRA-9639892-4 A06p010330.1_BraROA [cell wall] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A06p010400.1_BraROA R-BRA-3899389 A06p010400.1_BraROA [plasma membrane] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A06p010400.1_BraROA R-BRA-3899371 phospho-A06p010400.1_BraROA [plasma membrane] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A06p010620.1_BraROA R-BRA-1126888-2 A06p010620.1_BraROA [cytosol] R-BRA-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119360 Fructan biosynthesis none Brassica rapa A06p010740.1_BraROA R-BRA-1122849 A06p010740.1_BraROA [mitochondrion] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A06p010790.1_BraROA R-BRA-1122827-4 A06p010790.1_BraROA [cytosol] R-BRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119334 Ethylene biosynthesis from methionine none Brassica rapa A06p010970.1_BraROA R-BRA-5632129-2 A06p010970.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A06p010990.1_BraROA R-BRA-8854445 A06p010990.1_BraROA [cytosol] R-BRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119276 Choline biosynthesis III none Brassica rapa A06p011210.1_BraROA R-BRA-6787262 A06p011210.1_BraROA [nucleoplasm] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A06p011480.1_BraROA R-BRA-5655076-7 A06p011480.1_BraROA [Golgi lumen] R-BRA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5655101 Xyloglucan biosynthesis none Brassica rapa A06p011490.1_BraROA R-BRA-5655076 A06p011490.1_BraROA [Golgi lumen] R-BRA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5655101 Xyloglucan biosynthesis none Brassica rapa A06p011670.1_BraROA R-BRA-9025463 A06p011670.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119325 Sphingolipid metabolism none Brassica rapa A06p011970.1_BraROA R-BRA-1127523-4 A06p011970.1_BraROA [cytosol] R-BRA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Brassica rapa A06p012300.1_BraROA R-BRA-1125504 A06p012300.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A06p012300.1_BraROA R-BRA-1125504 A06p012300.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A06p012300.1_BraROA R-BRA-1125504 A06p012300.1_BraROA [cytosol] R-BRA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119295 Homoserine biosynthesis none Brassica rapa A06p012300.1_BraROA R-BRA-5606489 A06p012300.1_BraROA [plastid stroma] R-BRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119419 Lysine biosynthesis VI none Brassica rapa A06p012570.1_BraROA R-BRA-9025372-2 A06p012570.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119402 Phospholipid biosynthesis I none Brassica rapa A06p012610.1_BraROA R-BRA-1123250 A06p012610.1_BraROA [cytosol] R-BRA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119265 Tetrahydrofolate biosynthesis I none Brassica rapa A06p012610.1_BraROA R-BRA-1123250 A06p012610.1_BraROA [cytosol] R-BRA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119523 Tetrahydrofolate biosynthesis II none Brassica rapa A06p012900.1_BraROA R-BRA-9612406 A06p012900.1_BraROA [mitochondrial matrix] R-BRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119612 Cysteine degradation none Brassica rapa A06p013200.1_BraROA R-BRA-5632157-3 A06p013200.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A06p013200.1_BraROA R-BRA-5632157-3 A06p013200.1_BraROA [nucleoplasm] R-BRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5654828 Strigolactone signaling none Brassica rapa A06p013500.1_BraROA R-BRA-1128200-4 A06p013500.1_BraROA [cytosol] R-BRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119316 Phenylpropanoid biosynthesis none Brassica rapa A06p013720.1_BraROA R-BRA-1125920 A06p013720.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A06p013720.1_BraROA R-BRA-1125920 A06p013720.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A06p013760.1_BraROA R-BRA-1123404 A06p013760.1_BraROA [peroxisomal matrix] R-BRA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119407 Ureide biosynthesis none Brassica rapa A06p013830.1_BraROA R-BRA-1130084 A06p013830.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A06p013870.1_BraROA R-BRA-1128626 A06p013870.1_BraROA [cytosol] R-BRA-1119581 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119581 Thiosulfate disproportionation III (rhodanese) none Brassica rapa A06p013870.1_BraROA R-BRA-1128626 A06p013870.1_BraROA [cytosol] R-BRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119612 Cysteine degradation none Brassica rapa A06p014450.1_BraROA R-BRA-1123482-2 A06p014450.1_BraROA [plastid stroma] R-BRA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119367 Polyisoprenoid biosynthesis none Brassica rapa A06p014940.1_BraROA R-BRA-4415101 A06p014940.1_BraROA [cytosol] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A06p014940.1_BraROA R-BRA-4415101 A06p014940.1_BraROA [cytosol] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A06p015090.1_BraROA R-BRA-5632264-6 A06p015090.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A06p015330.1_BraROA R-BRA-1125014 A06p015330.1_BraROA [cytosol] R-BRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brassica rapa A06p015580.1_BraROA R-BRA-5149644 A06p015580.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A06p015850.1_BraROA R-BRA-1127173 A06p015850.1_BraROA [cytosol] R-BRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119540 Leucine biosynthesis none Brassica rapa A06p016110.1_BraROA R-BRA-5655070 A06p016110.1_BraROA [Golgi lumen] R-BRA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5655101 Xyloglucan biosynthesis none Brassica rapa A06p016390.1_BraROA R-BRA-6787276 A06p016390.1_BraROA [plastid stroma] R-BRA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119261 Salicylate biosynthesis none Brassica rapa A06p016390.1_BraROA R-BRA-6787950 A06p016390.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A06p016700.1_BraROA R-BRA-5608125 A06p016700.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A06p016870.1_BraROA R-BRA-5632334-2 A06p016870.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A06p016870.1_BraROA R-BRA-5632197-2 phospho-A06p016870.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A06p016870.1_BraROA R-BRA-5632183-2 phospho-A06p016870.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A06p016870.1_BraROA R-BRA-5632334-2 A06p016870.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A06p017200.1_BraROA R-BRA-1123717-2 A06p017200.1_BraROA [cytosol] R-BRA-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119395 Maackiain biosynthesis none Brassica rapa A06p017200.1_BraROA R-BRA-1123717-2 A06p017200.1_BraROA [cytosol] R-BRA-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119453 Medicarpin biosynthesis none Brassica rapa A06p017600.1_BraROA R-BRA-5608137-2 A06p017600.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A06p017780.1_BraROA R-BRA-1123211 A06p017780.1_BraROA [cytosol] R-BRA-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Brassica rapa A06p017780.1_BraROA R-BRA-1123211 A06p017780.1_BraROA [cytosol] R-BRA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119370 Sterol biosynthesis none Brassica rapa A06p017780.1_BraROA R-BRA-1123211 A06p017780.1_BraROA [cytosol] R-BRA-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119439 Cholesterol biosynthesis III (via desmosterol) none Brassica rapa A06p017780.1_BraROA R-BRA-1123211 A06p017780.1_BraROA [cytosol] R-BRA-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119559 Cholesterol biosynthesis I none Brassica rapa A06p018060.1_BraROA R-BRA-1127899-2 A06p018060.1_BraROA [cytosol] R-BRA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119370 Sterol biosynthesis none Brassica rapa A06p018760.1_BraROA R-BRA-9826666-2 A06p018760.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A06p018790.1_BraROA R-BRA-8868866-2 A06p018790.1_BraROA [endoplasmic reticulum membrane] R-BRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8868949 Intracellular auxin transport none Brassica rapa A06p019410.1_BraROA R-BRA-9611889-2 A06p019410.1_BraROA [mitochondrial matrix] R-BRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119479 Valine degradation none Brassica rapa A06p020000.1_BraROA R-BRA-1123895-7 A06p020000.1_BraROA [cytosol] R-BRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119334 Ethylene biosynthesis from methionine none Brassica rapa A06p020000.1_BraROA R-BRA-1123895-7 A06p020000.1_BraROA [cytosol] R-BRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119624 Methionine salvage pathway none Brassica rapa A06p020060.1_BraROA R-BRA-1123757-2 A06p020060.1_BraROA [cytosol] R-BRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119460 Isoleucine biosynthesis from threonine none Brassica rapa A06p020060.1_BraROA R-BRA-1123757-2 A06p020060.1_BraROA [cytosol] R-BRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119473 Cytokinins-O-glucoside biosynthesis none Brassica rapa A06p020060.1_BraROA R-BRA-1123757-2 A06p020060.1_BraROA [cytosol] R-BRA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119496 Pantothenate biosynthesis I none Brassica rapa A06p020060.1_BraROA R-BRA-1123757-2 A06p020060.1_BraROA [cytosol] R-BRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119540 Leucine biosynthesis none Brassica rapa A06p020060.1_BraROA R-BRA-1123757-2 A06p020060.1_BraROA [cytosol] R-BRA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119544 Pantothenate biosynthesis II none Brassica rapa A06p021160.1_BraROA R-BRA-9640708-2 phospho-A06p021160.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A06p021160.1_BraROA R-BRA-9640770-2 A06p021160.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A06p021160.1_BraROA R-BRA-9640708-2 phospho-A06p021160.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A06p021330.1_BraROA R-BRA-9684723-3 A06p021330.1_BraROA [cytosol] R-BRA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9609102 Flower development none Brassica rapa A06p021950.1_BraROA R-BRA-6788036-2 A06p021950.1_BraROA [cytosol] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A06p021950.1_BraROA R-BRA-1126611-2 A06p021950.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A06p022180.1_BraROA R-BRA-1129809 A06p022180.1_BraROA [mitochondrial inner membrane] R-BRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119410 Ascorbate biosynthesis none Brassica rapa A06p022580.1_BraROA R-BRA-9675365-2 A06p022580.1_BraROA [nucleoplasm] R-BRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675508 Root elongation none Brassica rapa A06p022840.1_BraROA R-BRA-5633332 A06p022840.1_BraROA [plastid stroma] R-BRA-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5633340 Citrulline-nitric oxide cycle none Brassica rapa A06p023130.1_BraROA R-BRA-1130302 A06p023130.1_BraROA [cytosol] R-BRA-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119451 Xylose degradation none Brassica rapa A06p023730.1_BraROA R-BRA-9611510 phospho-phosphorylated-SPL11 [plasma membrane] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A06p023730.1_BraROA R-BRA-9611544 SPL11 [nucleoplasm] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A06p023730.1_BraROA R-BRA-9611440 phospho-phosphorylated-SPL11 [nucleoplasm] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A06p024270.1_BraROA R-BRA-9639874 A06p024270.1_BraROA [plasma membrane] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A06p024400.1_BraROA R-BRA-9675423 A06p024400.1_BraROA [nucleoplasm] R-BRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675508 Root elongation none Brassica rapa A06p024400.1_BraROA R-BRA-9930290 MPK5 [nucleoplasm] R-BRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9766881 TF network involved in salinity response none Brassica rapa A06p024560.1_BraROA R-BRA-9611863 A06p024560.1_BraROA [mitochondrial matrix] R-BRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119479 Valine degradation none Brassica rapa A06p025670.1_BraROA R-BRA-1127161-2 A06p025670.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A06p026190.1_BraROA R-BRA-1250418-6 A06p026190.1_BraROA [cytosol] R-BRA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119374 Abscisic acid biosynthesis none Brassica rapa A06p026190.1_BraROA R-BRA-1129637-6 A06p026190.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A06p032050.1_BraROA R-BRA-1250418-4 A06p032050.1_BraROA [cytosol] R-BRA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119374 Abscisic acid biosynthesis none Brassica rapa A06p032050.1_BraROA R-BRA-1129637-4 A06p032050.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A06p032540.1_BraROA R-BRA-1129481-2 A06p032540.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A06p033650.1_BraROA R-BRA-1129514 A06p033650.1_BraROA [chloroplast] R-BRA-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119579 Glycine betaine biosynthesis III none Brassica rapa A06p034160.1_BraROA R-BRA-9684723 A06p034160.1_BraROA [cytosol] R-BRA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9609102 Flower development none Brassica rapa A06p034340.1_BraROA R-BRA-9025471 A06p034340.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119325 Sphingolipid metabolism none Brassica rapa A06p034340.1_BraROA R-BRA-1127934 A06p034340.1_BraROA [cytosol] R-BRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119610 Biotin biosynthesis II none Brassica rapa A06p035060.1_BraROA R-BRA-9927759 A06p035060.1_BraROA [nucleoplasm] R-BRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934036 Long day regulated expression of florigens none Brassica rapa A06p035420.1_BraROA R-BRA-5608102-3 A06p035420.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A06p035420.1_BraROA R-BRA-1123690 A06p035420.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A06p036280.1_BraROA R-BRA-1124037 A06p036280.1_BraROA [mitochondrial matrix] R-BRA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119289 Arginine degradation none Brassica rapa A06p036610.1_BraROA R-BRA-1126916 A06p036610.1_BraROA [plastid stroma] R-BRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119464 Methylerythritol phosphate pathway none Brassica rapa A06p037040.1_BraROA R-BRA-6787185-2 A06p037040.1_BraROA [nucleoplasm] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A06p037470.1_BraROA R-BRA-4827081 A06p037470.1_BraROA [plastid stroma] R-BRA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-4827054 Tetrapyrrole biosynthesis I none Brassica rapa A06p037790.1_BraROA R-BRA-1128989 A06p037790.1_BraROA [plastid stroma] R-BRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119509 Histidine biosynthesis I none Brassica rapa A06p037930.1_BraROA R-BRA-9675807 A06p037930.1_BraROA [nucleoplasm] R-BRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675782 Maturation none Brassica rapa A06p037930.1_BraROA R-BRA-9675807 A06p037930.1_BraROA [nucleoplasm] R-BRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675815 Leading strand synthesis none Brassica rapa A06p037930.1_BraROA R-BRA-9675807 A06p037930.1_BraROA [nucleoplasm] R-BRA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675885 Lagging strand synthesis none Brassica rapa A06p038270.1_BraROA R-BRA-1128950-3 A06p038270.1_BraROA [cytosol] R-BRA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119379 Flavin biosynthesis none Brassica rapa A06p038350.1_BraROA R-BRA-3230566 A06p038350.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A06p039220.1_BraROA R-BRA-1129082 A06p039220.1_BraROA [mitochondrial matrix] R-BRA-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119445 Beta-alanine biosynthesis II none Brassica rapa A06p039550.1_BraROA R-BRA-9640777 A06p039550.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A06p039550.1_BraROA R-BRA-9640777 A06p039550.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A06p039560.1_BraROA R-BRA-5632192-5 A06p039560.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A06p039980.1_BraROA R-BRA-1129818-3 A06p039980.1_BraROA [mitochondrial matrix] R-BRA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119365 Lysine degradation II none Brassica rapa A06p039980.1_BraROA R-BRA-1173242-3 A06p039980.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A06p040070.1_BraROA R-BRA-1123895-6 A06p040070.1_BraROA [cytosol] R-BRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119334 Ethylene biosynthesis from methionine none Brassica rapa A06p040070.1_BraROA R-BRA-1123895-6 A06p040070.1_BraROA [cytosol] R-BRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119624 Methionine salvage pathway none Brassica rapa A06p040520.1_BraROA R-BRA-9920292-2 A06p040520.1_BraROA [nucleoplasm] R-BRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934108 Short day regulated expression of florigens none Brassica rapa A06p040670.1_BraROA R-BRA-1129247-3 A06p040670.1_BraROA [mitochondrial inner membrane] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A06p040710.1_BraROA R-BRA-1127815-2 A06p040710.1_BraROA [cytosol] R-BRA-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119450 Homocysteine biosynthesis none Brassica rapa A06p040900.1_BraROA R-BRA-1128613-3 A06p040900.1_BraROA [cytosol] R-BRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119316 Phenylpropanoid biosynthesis none Brassica rapa A06p041160.1_BraROA R-BRA-9618057 A06p041160.1_BraROA [cytosol] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A06p041370.1_BraROA R-BRA-1128641 A06p041370.1_BraROA [cytosol] R-BRA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119331 Cysteine biosynthesis I none Brassica rapa A06p041450.1_BraROA R-BRA-1125910-3 A06p041450.1_BraROA [plastid stroma] R-BRA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119367 Polyisoprenoid biosynthesis none Brassica rapa A06p041730.1_BraROA R-BRA-1130152-2 A06p041730.1_BraROA [cytosol] R-BRA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119394 Pantothenate and coenzyme A biosynthesis III none Brassica rapa A06p041750.1_BraROA R-BRA-5221147-4 A06p041750.1_BraROA [cytosol] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A06p041910.1_BraROA R-BRA-1129355-2 A06p041910.1_BraROA [plastid] R-BRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119403 Removal of superoxide radicals none Brassica rapa A06p042730.1_BraROA R-BRA-1128586 A06p042730.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A06p042840.1_BraROA R-BRA-9025699-4 A06p042840.1_BraROA [plasma membrane] R-BRA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8858053 Polar auxin transport none Brassica rapa A06p042840.1_BraROA R-BRA-9025699-4 A06p042840.1_BraROA [plasma membrane] R-BRA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9025727 Iron uptake and transport in root vascular system none Brassica rapa A06p043000.1_BraROA R-BRA-8933784-3 A06p043000.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A06p043410.1_BraROA R-BRA-9924543 CYP714D1/EUI1 [endoplasmic reticulum membrane] R-BRA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Brassica rapa A06p043800.1_BraROA R-BRA-1127574-2 A06p043800.1_BraROA [cytosol] R-BRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119465 Sucrose biosynthesis none Brassica rapa A06p043910.1_BraROA R-BRA-9681915 A06p043910.1_BraROA [Golgi membrane] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A06p044140.1_BraROA R-BRA-1124809 A06p044140.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A06p044280.1_BraROA R-BRA-2731026 A06p044280.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119557 GA12 biosynthesis none Brassica rapa A06p044750.1_BraROA R-BRA-9675857 A06p044750.1_BraROA [nucleoplasm] R-BRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675782 Maturation none Brassica rapa A06p044860.1_BraROA R-BRA-9612399-2 A06p044860.1_BraROA [peroxisomal matrix] R-BRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119612 Cysteine degradation none Brassica rapa A06p044860.1_BraROA R-BRA-9612380-2 A06p044860.1_BraROA [cytosol] R-BRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119612 Cysteine degradation none Brassica rapa A06p045040.1_BraROA R-BRA-5632301 A06p045040.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A06p045040.1_BraROA R-BRA-5632301 A06p045040.1_BraROA [nucleoplasm] R-BRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5654828 Strigolactone signaling none Brassica rapa A06p045040.1_BraROA R-BRA-5632301 A06p045040.1_BraROA [nucleoplasm] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A06p045310.1_BraROA R-BRA-9675838 A06p045310.1_BraROA [nucleoplasm] R-BRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675815 Leading strand synthesis none Brassica rapa A06p045600.1_BraROA R-BRA-5679398-5 A06p045600.1_BraROA [cytosol] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A06p045930.1_BraROA R-BRA-9035785-2 A06p045930.1_BraROA [nucleoplasm] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A06p046040.1_BraROA R-BRA-9682506-2 A06p046040.1_BraROA [cytosol] R-BRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119410 Ascorbate biosynthesis none Brassica rapa A06p046050.1_BraROA R-BRA-5632268-4 A06p046050.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A06p046700.1_BraROA R-BRA-9675790 A06p046700.1_BraROA [nucleoplasm] R-BRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675824 DNA replication Initiation none Brassica rapa A06p046980.1_BraROA R-BRA-1126091 A06p046980.1_BraROA [cytosol] R-BRA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119394 Pantothenate and coenzyme A biosynthesis III none Brassica rapa A06p046980.1_BraROA R-BRA-1126091 A06p046980.1_BraROA [cytosol] R-BRA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119496 Pantothenate biosynthesis I none Brassica rapa A06p046980.1_BraROA R-BRA-1126091 A06p046980.1_BraROA [cytosol] R-BRA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119544 Pantothenate biosynthesis II none Brassica rapa A06p046980.1_BraROA R-BRA-1126091 A06p046980.1_BraROA [cytosol] R-BRA-1119568 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119568 Pantothenate biosynthesis III none Brassica rapa A06p047000.1_BraROA R-BRA-9640789-2 A06p047000.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A06p047400.1_BraROA R-BRA-9639789-4 A06p047400.1_BraROA [plasma membrane] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A06p047440.1_BraROA R-BRA-1127443-2 A06p047440.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A06p047440.1_BraROA R-BRA-1122818-2 A06p047440.1_BraROA [cytosol] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A06p047510.1_BraROA R-BRA-1126998-4 A06p047510.1_BraROA [cytosol] R-BRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119615 Mevalonate pathway none Brassica rapa A06p047520.1_BraROA R-BRA-1123161-2 A06p047520.1_BraROA [chloroplast] R-BRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119494 Tryptophan biosynthesis none Brassica rapa A06p048130.1_BraROA R-BRA-6787262-8 A06p048130.1_BraROA [nucleoplasm] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A06p048340.1_BraROA R-BRA-1126095-5 A06p048340.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A06p048440.1_BraROA R-BRA-9766876-2 A06p048440.1_BraROA [nucleoplasm] R-BRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9766881 TF network involved in salinity response none Brassica rapa A06p048440.1_BraROA R-BRA-9766876-2 A06p048440.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A06p049250.1_BraROA R-BRA-9638997 A06p049250.1_BraROA [cytosol] R-BRA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119434 Phytic acid biosynthesis (lipid-independent) none Brassica rapa A06p049790.1_BraROA R-BRA-1122601 A06p049790.1_BraROA [mitochondrial inner membrane] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A06p050020.1_BraROA R-BRA-1124138-3 A06p050020.1_BraROA [cytosol] R-BRA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119394 Pantothenate and coenzyme A biosynthesis III none Brassica rapa A06p050340.1_BraROA R-BRA-8879006 A06p050340.1_BraROA [nucleoplasm] R-BRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8879007 Response to cold temperature none Brassica rapa A06p050410.1_BraROA R-BRA-1127873-3 A06p050410.1_BraROA [plastid stroma] R-BRA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119424 Plastid glycolysis none Brassica rapa A06p050410.1_BraROA R-BRA-1127873-3 A06p050410.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A06p050980.1_BraROA R-BRA-1129111 A06p050980.1_BraROA [cytosol] R-BRA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119349 S-methylmethionine cycle none Brassica rapa A06p050980.1_BraROA R-BRA-1129111 A06p050980.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A06p051420.1_BraROA R-BRA-8854445-3 A06p051420.1_BraROA [cytosol] R-BRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119276 Choline biosynthesis III none Brassica rapa A06p051750.1_BraROA R-BRA-5655076-3 A06p051750.1_BraROA [Golgi lumen] R-BRA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5655101 Xyloglucan biosynthesis none Brassica rapa A06p052220.1_BraROA R-BRA-1129610 A06p052220.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A06p052350.1_BraROA R-BRA-5679402-6 A06p052350.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A06p052360.1_BraROA R-BRA-5679402-3 A06p052360.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A06p052420.1_BraROA R-BRA-5679470-3 A06p052420.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A06p053320.1_BraROA R-BRA-9640785 A06p053320.1_BraROA [nucleoplasm] R-BRA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640882 Assembly of pre-replication complex none Brassica rapa A06p053320.1_BraROA R-BRA-9640785 A06p053320.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A06p053460.1_BraROA R-BRA-1130006-2 A06p053460.1_BraROA [plastid stroma] R-BRA-1119569 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119569 Kievitone biosynthesis none Brassica rapa A06p054050.1_BraROA R-BRA-1130181-3 A06p054050.1_BraROA [plastid stroma] R-BRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119430 Chorismate biosynthesis none Brassica rapa A06p054630.1_BraROA R-BRA-5632319-3 phospho-A06p054630.1_BraROA [plasma membrane] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A06p054770.1_BraROA R-BRA-9640767-2 A06p054770.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A06p054770.1_BraROA R-BRA-9640767-2 A06p054770.1_BraROA [nucleoplasm] R-BRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675824 DNA replication Initiation none Brassica rapa A06p054800.1_BraROA R-BRA-4415060 A06p054800.1_BraROA [plasma membrane] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A06p054800.1_BraROA R-BRA-4415065 phospho-A06p054800.1_BraROA [plasma membrane] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A06p054860.1_BraROA R-BRA-5631953 A06p054860.1_BraROA [mitochondrial matrix] R-BRA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119289 Arginine degradation none Brassica rapa A06p054860.1_BraROA R-BRA-1124214 A06p054860.1_BraROA [cytosol] R-BRA-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119318 Proline biosynthesis V (from arginine) none Brassica rapa A06p054860.1_BraROA R-BRA-1124214 A06p054860.1_BraROA [cytosol] R-BRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119610 Biotin biosynthesis II none Brassica rapa A06p055520.1_BraROA R-BRA-1128857-5 A06p055520.1_BraROA [cytosol] R-BRA-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119609 Phaseic acid biosynthesis none Brassica rapa A06p055620.1_BraROA R-BRA-9626337-2 A06p055620.1_BraROA [Golgi-associated vesicle] R-BRA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9626305 Regulatory network of nutrient accumulation none Brassica rapa A06p055640.1_BraROA R-BRA-6788026-2 A06p055640.1_BraROA [cytosol] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A06p055920.1_BraROA R-BRA-9640786 A06p055920.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A06p055920.1_BraROA R-BRA-9640786 A06p055920.1_BraROA [nucleoplasm] R-BRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675824 DNA replication Initiation none Brassica rapa A06p056010.1_BraROA R-BRA-1124484 A06p056010.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A06p056020.1_BraROA R-BRA-1125489-3 A06p056020.1_BraROA [Golgi membrane] R-BRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119428 GDP-D-rhamnose biosynthesis none Brassica rapa A06p056020.1_BraROA R-BRA-1127743-3 A06p056020.1_BraROA [cytosol] R-BRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119428 GDP-D-rhamnose biosynthesis none Brassica rapa A06p056020.1_BraROA R-BRA-1125489-3 A06p056020.1_BraROA [Golgi membrane] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A06p056020.1_BraROA R-BRA-1125489-3 A06p056020.1_BraROA [Golgi membrane] R-BRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brassica rapa A06p056020.1_BraROA R-BRA-1127743-3 A06p056020.1_BraROA [cytosol] R-BRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brassica rapa A06p056600.1_BraROA R-BRA-1128257-3 A06p056600.1_BraROA [plastid stroma] R-BRA-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119529 Sulfate activation for sulfonation none Brassica rapa A06p056710.1_BraROA R-BRA-9658563 A06p056710.1_BraROA [endoplasmic reticulum lumen] R-BRA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119502 Allantoin degradation none Brassica rapa A06p057000.1_BraROA R-BRA-1123819-3 A06p057000.1_BraROA [plastid stroma] R-BRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119464 Methylerythritol phosphate pathway none Brassica rapa A06p057030.1_BraROA R-BRA-8986682-3 A06p057030.1_BraROA [extracellular region] R-BRA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8986768 Anther and pollen development none Brassica rapa A06p057080.1_BraROA R-BRA-9920344 A06p057080.1_BraROA [nucleoplasm] R-BRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934108 Short day regulated expression of florigens none Brassica rapa A06p057580.1_BraROA R-BRA-1127562-3 A06p057580.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A06p057580.1_BraROA R-BRA-1130466-3 A06p057580.1_BraROA [cytosol] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A06p057700.1_BraROA R-BRA-1128613-2 A06p057700.1_BraROA [cytosol] R-BRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119316 Phenylpropanoid biosynthesis none Brassica rapa A06p057910.1_BraROA R-BRA-9675293 A06p057910.1_BraROA [nucleoplasm] R-BRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030557 Lateral root initiation none Brassica rapa A06p058100.1_BraROA R-BRA-5221147 A06p058100.1_BraROA [cytosol] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A06p058130.1_BraROA R-BRA-1127820-2 A06p058130.1_BraROA [plasma membrane] R-BRA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119314 Cellulose biosynthesis none Brassica rapa A07g505230.1_BraROA R-BRA-8987548-2 A07g505230.1_BraROA [peroxisomal matrix] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A07g507100.1_BraROA R-BRA-5149657-3 A07g507100.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A07g507100.1_BraROA R-BRA-1129239-3 A07g507100.1_BraROA [cytosol] R-BRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119570 Cytosolic glycolysis none Brassica rapa A07g507620.1_BraROA R-BRA-8987448 A07g507620.1_BraROA [peroxisomal matrix] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A07g509030.1_BraROA R-BRA-1122242-3 A07g509030.1_BraROA [cytosol] R-BRA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119267 Phenylalanine degradation III none Brassica rapa A07g509110.1_BraROA R-BRA-1122242 A07g509110.1_BraROA [cytosol] R-BRA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119267 Phenylalanine degradation III none Brassica rapa A07p000260.1_BraROA R-BRA-1129547-17 A07p000260.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A07p000260.1_BraROA R-BRA-1129547-17 A07p000260.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A07p000260.1_BraROA R-BRA-1129547-17 A07p000260.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A07p000320.1_BraROA R-BRA-1128431 A07p000320.1_BraROA [cytosol] R-BRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119316 Phenylpropanoid biosynthesis none Brassica rapa A07p000480.1_BraROA R-BRA-5655057 A07p000480.1_BraROA [Golgi lumen] R-BRA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5655101 Xyloglucan biosynthesis none Brassica rapa A07p000500.1_BraROA R-BRA-1122881-3 A07p000500.1_BraROA [cytosol] R-BRA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Brassica rapa A07p000500.1_BraROA R-BRA-1122881-3 A07p000500.1_BraROA [cytosol] R-BRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119438 Secologanin and strictosidine biosynthesis none Brassica rapa A07p000500.1_BraROA R-BRA-1122881-3 A07p000500.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A07p000520.1_BraROA R-BRA-1122881-2 A07p000520.1_BraROA [cytosol] R-BRA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Brassica rapa A07p000520.1_BraROA R-BRA-1122881-2 A07p000520.1_BraROA [cytosol] R-BRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119438 Secologanin and strictosidine biosynthesis none Brassica rapa A07p000520.1_BraROA R-BRA-1122881-2 A07p000520.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A07p001390.1_BraROA R-BRA-1127523-2 A07p001390.1_BraROA [cytosol] R-BRA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Brassica rapa A07p002880.1_BraROA R-BRA-9826620-8 HOX12/ OsGT1 [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A07p002880.1_BraROA R-BRA-9826620-8 HOX12/ OsGT1 [nucleoplasm] R-BRA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Brassica rapa A07p003310.1_BraROA R-BRA-9916252-3 OsEGT1 [nucleoplasm] R-BRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9916190 Root angle formation: elongation and curvature response none Brassica rapa A07p004710.1_BraROA R-BRA-8868994-3 A07p004710.1_BraROA [endoplasmic reticulum membrane] R-BRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8868949 Intracellular auxin transport none Brassica rapa A07p004870.1_BraROA R-BRA-1124496-2 A07p004870.1_BraROA [cytosol] R-BRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119615 Mevalonate pathway none Brassica rapa A07p004970.1_BraROA R-BRA-1125974-2 A07p004970.1_BraROA [cytosol] R-BRA-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119262 Threonine biosynthesis from homoserine none Brassica rapa A07p004970.1_BraROA R-BRA-1125974-2 A07p004970.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A07p007260.1_BraROA R-BRA-5655076-4 A07p007260.1_BraROA [Golgi lumen] R-BRA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5655101 Xyloglucan biosynthesis none Brassica rapa A07p009520.1_BraROA R-BRA-5084918 A07p009520.1_BraROA [cytosol] R-BRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119624 Methionine salvage pathway none Brassica rapa A07p010020.1_BraROA R-BRA-1124083 A07p010020.1_BraROA [cytosol] R-BRA-1119323 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119323 Lipid-A-precursor biosynthesis none Brassica rapa A07p010300.1_BraROA R-BRA-1127443 A07p010300.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A07p010300.1_BraROA R-BRA-1122818 A07p010300.1_BraROA [cytosol] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A07p010760.1_BraROA R-BRA-9645907 A07p010760.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A07p010760.1_BraROA R-BRA-9645907 A07p010760.1_BraROA [nucleoplasm] R-BRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675824 DNA replication Initiation none Brassica rapa A07p011630.1_BraROA R-BRA-9920304 A07p011630.1_BraROA [nucleoplasm] R-BRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934036 Long day regulated expression of florigens none Brassica rapa A07p011630.1_BraROA R-BRA-9920304 A07p011630.1_BraROA [nucleoplasm] R-BRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934108 Short day regulated expression of florigens none Brassica rapa A07p011870.1_BraROA R-BRA-1127733-2 A07p011870.1_BraROA [cytosol] R-BRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119460 Isoleucine biosynthesis from threonine none Brassica rapa A07p011870.1_BraROA R-BRA-1127733-2 A07p011870.1_BraROA [cytosol] R-BRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119600 Valine biosynthesis none Brassica rapa A07p012220.1_BraROA R-BRA-1129113 A07p012220.1_BraROA [cytosol] R-BRA-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119298 Glutathione redox reactions II none Brassica rapa A07p012220.1_BraROA R-BRA-1129113 A07p012220.1_BraROA [cytosol] R-BRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119437 Glutathione redox reactions I none Brassica rapa A07p012470.1_BraROA R-BRA-1129921 A07p012470.1_BraROA [cytosol] R-BRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119428 GDP-D-rhamnose biosynthesis none Brassica rapa A07p012470.1_BraROA R-BRA-1129921 A07p012470.1_BraROA [cytosol] R-BRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brassica rapa A07p012560.1_BraROA R-BRA-1129029-2 A07p012560.1_BraROA [cytosol] R-BRA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119501 S-adenosyl-L-methionine cycle none Brassica rapa A07p013030.1_BraROA R-BRA-5683263 A07p013030.1_BraROA [cytosol] R-BRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119586 Cyanate degradation none Brassica rapa A07p013040.1_BraROA R-BRA-1124453 A07p013040.1_BraROA [peroxisomal matrix] R-BRA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119407 Ureide biosynthesis none Brassica rapa A07p013510.1_BraROA R-BRA-8879002 A07p013510.1_BraROA [nucleoplasm] R-BRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8879007 Response to cold temperature none Brassica rapa A07p013710.1_BraROA R-BRA-1128902 A07p013710.1_BraROA [cytosol] R-BRA-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119271 Threonine degradation none Brassica rapa A07p013710.1_BraROA R-BRA-1128902 A07p013710.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A07p013710.1_BraROA R-BRA-9658656 A07p013710.1_BraROA [cytosol] R-BRA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119567 Beta-alanine biosynthesis I none Brassica rapa A07p014290.1_BraROA R-BRA-1130032-5 A07p014290.1_BraROA [mitochondrial inner membrane] R-BRA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119260 Cardiolipin biosynthesis none Brassica rapa A07p014460.1_BraROA R-BRA-9618186-5 A07p014460.1_BraROA [plant-type vacuole membrane] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A07p016660.1_BraROA R-BRA-5654942-2 A07p016660.1_BraROA [Golgi lumen] R-BRA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5654909 Xylan biosynthesis none Brassica rapa A07p017050.1_BraROA R-BRA-9675500-2 A07p017050.1_BraROA [endoplasmic reticulum membrane] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A07p017700.1_BraROA R-BRA-9826604-2 A07p017700.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A07p018890.1_BraROA R-BRA-1130327-7 A07p018890.1_BraROA [cytosol] R-BRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119586 Cyanate degradation none Brassica rapa A07p019270.1_BraROA R-BRA-1128126-5 A07p019270.1_BraROA [endosome] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A07p019270.1_BraROA R-BRA-5679348-5 A07p019270.1_BraROA [plasma membrane] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A07p019650.1_BraROA R-BRA-9826680 A07p019650.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A07p020070.1_BraROA R-BRA-1128319 A07p020070.1_BraROA [cytosol] R-BRA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119341 Galactosylcyclitol biosynthesis none Brassica rapa A07p021480.1_BraROA R-BRA-1123211-2 A07p021480.1_BraROA [cytosol] R-BRA-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Brassica rapa A07p021480.1_BraROA R-BRA-1123211-2 A07p021480.1_BraROA [cytosol] R-BRA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119370 Sterol biosynthesis none Brassica rapa A07p021480.1_BraROA R-BRA-1123211-2 A07p021480.1_BraROA [cytosol] R-BRA-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119439 Cholesterol biosynthesis III (via desmosterol) none Brassica rapa A07p021480.1_BraROA R-BRA-1123211-2 A07p021480.1_BraROA [cytosol] R-BRA-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119559 Cholesterol biosynthesis I none Brassica rapa A07p021650.1_BraROA R-BRA-5608137 A07p021650.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A07p022220.1_BraROA R-BRA-9640671-4 A07p022220.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A07p022220.1_BraROA R-BRA-9640671-4 A07p022220.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A07p022410.1_BraROA R-BRA-9645950 A07p022410.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A07p022410.1_BraROA R-BRA-9645950 A07p022410.1_BraROA [nucleoplasm] R-BRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675782 Maturation none Brassica rapa A07p022410.1_BraROA R-BRA-9645950 A07p022410.1_BraROA [nucleoplasm] R-BRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675815 Leading strand synthesis none Brassica rapa A07p022410.1_BraROA R-BRA-9645950 A07p022410.1_BraROA [nucleoplasm] R-BRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675824 DNA replication Initiation none Brassica rapa A07p022410.1_BraROA R-BRA-9645950 A07p022410.1_BraROA [nucleoplasm] R-BRA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675885 Lagging strand synthesis none Brassica rapa A07p022470.1_BraROA R-BRA-4754219-2 A07p022470.1_BraROA [plastid stroma] R-BRA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119449 Carotenoid biosynthesis none Brassica rapa A07p022610.1_BraROA R-BRA-4415007 A07p022610.1_BraROA [cytosol] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A07p022610.1_BraROA R-BRA-4415016 phospho-A07p022610.1_BraROA [cytosol] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A07p022610.1_BraROA R-BRA-4415007 A07p022610.1_BraROA [cytosol] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A07p022800.1_BraROA R-BRA-1129247-2 A07p022800.1_BraROA [mitochondrial inner membrane] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A07p022870.1_BraROA R-BRA-9826620-3 HOX12/ OsGT1 [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A07p022870.1_BraROA R-BRA-9826620-3 HOX12/ OsGT1 [nucleoplasm] R-BRA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Brassica rapa A07p022910.1_BraROA R-BRA-9675274 A07p022910.1_BraROA [nucleoplasm] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A07p023320.1_BraROA R-BRA-9618057-2 A07p023320.1_BraROA [cytosol] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A07p023390.1_BraROA R-BRA-8854102 A07p023390.1_BraROA [cytosol] R-BRA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119556 Choline biosynthesis I none Brassica rapa A07p023520.1_BraROA R-BRA-4723690 A07p023520.1_BraROA [plastid stroma] R-BRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119464 Methylerythritol phosphate pathway none Brassica rapa A07p023970.1_BraROA R-BRA-9608694-6 A07p023970.1_BraROA [cytosol] R-BRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928831 Severe drought none Brassica rapa A07p023970.1_BraROA R-BRA-9928774-6 A07p023970.1_BraROA [nucleoplasm] R-BRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928831 Severe drought none Brassica rapa A07p024410.1_BraROA R-BRA-1126828-2 A07p024410.1_BraROA [plastid] R-BRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119403 Removal of superoxide radicals none Brassica rapa A07p024640.1_BraROA R-BRA-5608161 A07p024640.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A07p024870.1_BraROA R-BRA-9608682 A07p024870.1_BraROA [nucleoplasm] R-BRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934036 Long day regulated expression of florigens none Brassica rapa A07p024870.1_BraROA R-BRA-9608682 A07p024870.1_BraROA [nucleoplasm] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A07p024870.1_BraROA R-BRA-9608606 A07p024870.1_BraROA [cytosol] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A07p025060.1_BraROA R-BRA-1126799 A07p025060.1_BraROA [cytosol] R-BRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119428 GDP-D-rhamnose biosynthesis none Brassica rapa A07p025060.1_BraROA R-BRA-1126799 A07p025060.1_BraROA [cytosol] R-BRA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119563 UDP-D-xylose biosynthesis none Brassica rapa A07p025060.1_BraROA R-BRA-1126799 A07p025060.1_BraROA [cytosol] R-BRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brassica rapa A07p025280.1_BraROA R-BRA-9611528-4 RLCK176 [cytosol] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A07p025280.1_BraROA R-BRA-9611477-4 phospho-phosphorylated-RLCK176 [cytosol] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A07p025400.1_BraROA R-BRA-3315084 A07p025400.1_BraROA [cytosol] R-BRA-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119342 Gamma-glutamyl cycle none Brassica rapa A07p025590.1_BraROA R-BRA-8987531-7 A07p025590.1_BraROA [chloroplast] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A07p025590.1_BraROA R-BRA-1125951-7 A07p025590.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A07p025640.1_BraROA R-BRA-5632238 A07p025640.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A07p025640.1_BraROA R-BRA-5632238 A07p025640.1_BraROA [cytosol] R-BRA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934257 Transition from vegetative to reproductive shoot apical meristem none Brassica rapa A07p025640.1_BraROA R-BRA-9927894 A07p025640.1_BraROA [nucleoplasm] R-BRA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934257 Transition from vegetative to reproductive shoot apical meristem none Brassica rapa A07p025640.1_BraROA R-BRA-5632238 A07p025640.1_BraROA [cytosol] R-BRA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9609102 Flower development none Brassica rapa A07p025640.1_BraROA R-BRA-5632238 A07p025640.1_BraROA [cytosol] R-BRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928831 Severe drought none Brassica rapa A07p025640.1_BraROA R-BRA-9927894 A07p025640.1_BraROA [nucleoplasm] R-BRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928831 Severe drought none Brassica rapa A07p025700.1_BraROA R-BRA-1126400-3 A07p025700.1_BraROA [chloroplast] R-BRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119494 Tryptophan biosynthesis none Brassica rapa A07p025890.1_BraROA R-BRA-9681886-2 A07p025890.1_BraROA [cytosol] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A07p026010.1_BraROA R-BRA-9766876-4 A07p026010.1_BraROA [nucleoplasm] R-BRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9766881 TF network involved in salinity response none Brassica rapa A07p026010.1_BraROA R-BRA-9766876-4 A07p026010.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A07p026420.1_BraROA R-BRA-9025351-2 A07p026420.1_BraROA [cytosol] R-BRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119402 Phospholipid biosynthesis I none Brassica rapa A07p026460.1_BraROA R-BRA-1122601-2 A07p026460.1_BraROA [mitochondrial inner membrane] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A07p027350.1_BraROA R-BRA-5149646-2 A07p027350.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A07p027350.1_BraROA R-BRA-1126652-2 A07p027350.1_BraROA [cytosol] R-BRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119570 Cytosolic glycolysis none Brassica rapa A07p027360.1_BraROA R-BRA-1127922-2 A07p027360.1_BraROA [cytosol] R-BRA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119370 Sterol biosynthesis none Brassica rapa A07p027370.1_BraROA R-BRA-1126955-2 A07p027370.1_BraROA [plastid] R-BRA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119407 Ureide biosynthesis none Brassica rapa A07p027530.1_BraROA R-BRA-1130235-3 A07p027530.1_BraROA [cytosol] R-BRA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119261 Salicylate biosynthesis none Brassica rapa A07p027530.1_BraROA R-BRA-1130235-3 A07p027530.1_BraROA [cytosol] R-BRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119418 Suberin biosynthesis none Brassica rapa A07p027530.1_BraROA R-BRA-1130235-3 A07p027530.1_BraROA [cytosol] R-BRA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119582 Phenylpropanoid biosynthesis, initial reactions none Brassica rapa A07p028540.1_BraROA R-BRA-1130032 A07p028540.1_BraROA [mitochondrial inner membrane] R-BRA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119260 Cardiolipin biosynthesis none Brassica rapa A07p028610.1_BraROA R-BRA-1129818-2 A07p028610.1_BraROA [mitochondrial matrix] R-BRA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119365 Lysine degradation II none Brassica rapa A07p028610.1_BraROA R-BRA-1173242-2 A07p028610.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A07p028750.1_BraROA R-BRA-1128396 A07p028750.1_BraROA [cytosol] R-BRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119473 Cytokinins-O-glucoside biosynthesis none Brassica rapa A07p028770.1_BraROA R-BRA-5149683 A07p028770.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A07p029390.1_BraROA R-BRA-9640694 A07p029390.1_BraROA [nucleoplasm] R-BRA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640882 Assembly of pre-replication complex none Brassica rapa A07p029390.1_BraROA R-BRA-9640694 A07p029390.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A07p030310.1_BraROA R-BRA-5632241-4 A07p030310.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A07p030370.1_BraROA R-BRA-1126157-3 A07p030370.1_BraROA [cytosol] R-BRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119460 Isoleucine biosynthesis from threonine none Brassica rapa A07p030370.1_BraROA R-BRA-1126157-3 A07p030370.1_BraROA [cytosol] R-BRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119600 Valine biosynthesis none Brassica rapa A07p030550.1_BraROA R-BRA-8853988 Phosphatidylglycerophosphatase [mitochondrial matrix] R-BRA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119260 Cardiolipin biosynthesis none Brassica rapa A07p031020.1_BraROA R-BRA-9675391-3 A07p031020.1_BraROA [nucleoplasm] R-BRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675508 Root elongation none Brassica rapa A07p031200.1_BraROA R-BRA-8933728-2 A07p031200.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A07p031350.1_BraROA R-BRA-9924407-4 EXPB5 [basolateral plasma membrane] R-BRA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924451 Shoot (tiller) formation and regulation of tiller angle none Brassica rapa A07p031810.1_BraROA R-BRA-1129411-2 A07p031810.1_BraROA [cytosol] R-BRA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119496 Pantothenate biosynthesis I none Brassica rapa A07p031810.1_BraROA R-BRA-1129411-2 A07p031810.1_BraROA [cytosol] R-BRA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119544 Pantothenate biosynthesis II none Brassica rapa A07p032190.1_BraROA R-BRA-9612399 A07p032190.1_BraROA [peroxisomal matrix] R-BRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119612 Cysteine degradation none Brassica rapa A07p032190.1_BraROA R-BRA-9612380 A07p032190.1_BraROA [cytosol] R-BRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119612 Cysteine degradation none Brassica rapa A07p032570.1_BraROA R-BRA-5608164-4 A07p032570.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A07p032570.1_BraROA R-BRA-5608164-4 A07p032570.1_BraROA [nucleoplasm] R-BRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030557 Lateral root initiation none Brassica rapa A07p032570.1_BraROA R-BRA-5608164-4 A07p032570.1_BraROA [nucleoplasm] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A07p032570.1_BraROA R-BRA-9658967-4 A07p032570.1_BraROA [cytosol] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A07p032600.1_BraROA R-BRA-5679398-2 A07p032600.1_BraROA [cytosol] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A07p032650.1_BraROA R-BRA-3321270 A07p032650.1_BraROA [chloroplast inner membrane] R-BRA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119287 Vitamin E biosynthesis none Brassica rapa A07p032670.1_BraROA R-BRA-1129769 A07p032670.1_BraROA [cytosol] R-BRA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119332 Jasmonic acid biosynthesis none Brassica rapa A07p032670.1_BraROA R-BRA-1129769 A07p032670.1_BraROA [cytosol] R-BRA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119618 13-LOX and 13-HPL pathway none Brassica rapa A07p033070.1_BraROA R-BRA-8987467-2 A07p033070.1_BraROA [chloroplast] R-BRA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119502 Allantoin degradation none Brassica rapa A07p033100.1_BraROA R-BRA-1126860-2 A07p033100.1_BraROA [cytosol] R-BRA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119321 Glycerol degradation I none Brassica rapa A07p033120.1_BraROA R-BRA-5632157-2 A07p033120.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A07p033120.1_BraROA R-BRA-5632157-2 A07p033120.1_BraROA [nucleoplasm] R-BRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5654828 Strigolactone signaling none Brassica rapa A07p033340.1_BraROA R-BRA-6787933-2 A07p033340.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A07p033520.1_BraROA R-BRA-5149657-4 A07p033520.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A07p033520.1_BraROA R-BRA-1129239-4 A07p033520.1_BraROA [cytosol] R-BRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119570 Cytosolic glycolysis none Brassica rapa A07p033540.1_BraROA R-BRA-1125920-3 A07p033540.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A07p033540.1_BraROA R-BRA-1125920-3 A07p033540.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A07p033560.1_BraROA R-BRA-1127527-2 A07p033560.1_BraROA [cytosol] R-BRA-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Brassica rapa A07p033690.1_BraROA R-BRA-1128626-3 A07p033690.1_BraROA [cytosol] R-BRA-1119581 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119581 Thiosulfate disproportionation III (rhodanese) none Brassica rapa A07p033690.1_BraROA R-BRA-1128626-3 A07p033690.1_BraROA [cytosol] R-BRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119612 Cysteine degradation none Brassica rapa A07p034350.1_BraROA R-BRA-1130304 A07p034350.1_BraROA [cytosol] R-BRA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119291 Nitrate assimilation none Brassica rapa A07p034540.1_BraROA R-BRA-1125550 A07p034540.1_BraROA [cytosol] R-BRA-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119623 Acyl-CoA synthetase pathway none Brassica rapa A07p034580.1_BraROA R-BRA-9675818-2 A07p034580.1_BraROA [nucleoplasm] R-BRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675815 Leading strand synthesis none Brassica rapa A07p034670.1_BraROA R-BRA-1122242-2 A07p034670.1_BraROA [cytosol] R-BRA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119267 Phenylalanine degradation III none Brassica rapa A07p034980.1_BraROA R-BRA-8868866-4 A07p034980.1_BraROA [endoplasmic reticulum membrane] R-BRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8868949 Intracellular auxin transport none Brassica rapa A07p035380.1_BraROA R-BRA-9826692-5 A07p035380.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A07p035440.1_BraROA R-BRA-8868961 A07p035440.1_BraROA [plant-type vacuole membrane] R-BRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8868949 Intracellular auxin transport none Brassica rapa A07p035720.1_BraROA R-BRA-5632334 A07p035720.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A07p035720.1_BraROA R-BRA-5632197 phospho-A07p035720.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A07p035720.1_BraROA R-BRA-5632183 phospho-A07p035720.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A07p035720.1_BraROA R-BRA-5632334 A07p035720.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A07p035830.1_BraROA R-BRA-1129514-2 A07p035830.1_BraROA [chloroplast] R-BRA-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119579 Glycine betaine biosynthesis III none Brassica rapa A07p036100.1_BraROA R-BRA-5655076-5 A07p036100.1_BraROA [Golgi lumen] R-BRA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5655101 Xyloglucan biosynthesis none Brassica rapa A07p036120.1_BraROA R-BRA-5655070-2 A07p036120.1_BraROA [Golgi lumen] R-BRA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5655101 Xyloglucan biosynthesis none Brassica rapa A07p036540.1_BraROA R-BRA-8854127 A07p036540.1_BraROA [cytosol] R-BRA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119556 Choline biosynthesis I none Brassica rapa A07p036610.1_BraROA R-BRA-1128815 A07p036610.1_BraROA [cytosol] R-BRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119452 Galactose degradation II none Brassica rapa A07p036610.1_BraROA R-BRA-1128815 A07p036610.1_BraROA [cytosol] R-BRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119465 Sucrose biosynthesis none Brassica rapa A07p037720.1_BraROA R-BRA-1128126 A07p037720.1_BraROA [endosome] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A07p037720.1_BraROA R-BRA-5679348 A07p037720.1_BraROA [plasma membrane] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A07p038560.1_BraROA R-BRA-9636827 A07p038560.1_BraROA [nucleoplasm] R-BRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9766881 TF network involved in salinity response none Brassica rapa A07p038620.1_BraROA R-BRA-1126095-2 A07p038620.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A07p038670.1_BraROA R-BRA-6787262-6 A07p038670.1_BraROA [nucleoplasm] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A07p039090.1_BraROA R-BRA-9826604-3 A07p039090.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A07p039260.1_BraROA R-BRA-5679470 A07p039260.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A07p039300.1_BraROA R-BRA-1128804 A07p039300.1_BraROA [cytosol] R-BRA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119516 Trehalose biosynthesis I none Brassica rapa A07p039320.1_BraROA R-BRA-8987448-2 A07p039320.1_BraROA [peroxisomal matrix] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A07p039340.1_BraROA R-BRA-9639211 A07p039340.1_BraROA [plant-type vacuole membrane] R-BRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639136 Response to Aluminum stress none Brassica rapa A07p039660.1_BraROA R-BRA-9675500 A07p039660.1_BraROA [endoplasmic reticulum membrane] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A07p039760.1_BraROA R-BRA-9646043-2 A07p039760.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A07p039760.1_BraROA R-BRA-9646043-2 A07p039760.1_BraROA [nucleoplasm] R-BRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675782 Maturation none Brassica rapa A07p039760.1_BraROA R-BRA-9646043-2 A07p039760.1_BraROA [nucleoplasm] R-BRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675815 Leading strand synthesis none Brassica rapa A07p039760.1_BraROA R-BRA-9646043-2 A07p039760.1_BraROA [nucleoplasm] R-BRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675824 DNA replication Initiation none Brassica rapa A07p039760.1_BraROA R-BRA-9646043-2 A07p039760.1_BraROA [nucleoplasm] R-BRA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675885 Lagging strand synthesis none Brassica rapa A07p039940.1_BraROA R-BRA-1129650 A07p039940.1_BraROA [cytosol] R-BRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119418 Suberin biosynthesis none Brassica rapa A07p040040.1_BraROA R-BRA-9675280 A07p040040.1_BraROA [nucleoplasm] R-BRA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030680 Crown root development none Brassica rapa A07p040160.1_BraROA R-BRA-5608169 A07p040160.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A07p040850.1_BraROA R-BRA-9640664-2 A07p040850.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A07p041880.1_BraROA R-BRA-5679470-5 A07p041880.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A07p042740.1_BraROA R-BRA-6787262-5 A07p042740.1_BraROA [nucleoplasm] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A07p042830.1_BraROA R-BRA-1126095-4 A07p042830.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A07p042930.1_BraROA R-BRA-9636827-2 A07p042930.1_BraROA [nucleoplasm] R-BRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9766881 TF network involved in salinity response none Brassica rapa A07p043050.1_BraROA R-BRA-5633270-2 A07p043050.1_BraROA [cytosol] R-BRA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119495 Citrulline biosynthesis none Brassica rapa A07p043160.1_BraROA R-BRA-9025463-3 A07p043160.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119325 Sphingolipid metabolism none Brassica rapa A07p043220.1_BraROA R-BRA-4827046-2 A07p043220.1_BraROA [plastid stroma] R-BRA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-4827054 Tetrapyrrole biosynthesis I none Brassica rapa A07p043480.1_BraROA R-BRA-5632120 A07p043480.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A07p043710.1_BraROA R-BRA-9640729 A07p043710.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A07p043710.1_BraROA R-BRA-9640729 A07p043710.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A07p043810.1_BraROA R-BRA-1130327-2 A07p043810.1_BraROA [cytosol] R-BRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119586 Cyanate degradation none Brassica rapa A07p044010.1_BraROA R-BRA-1126549 A07p044010.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A07p044020.1_BraROA R-BRA-8987548 A07p044020.1_BraROA [peroxisomal matrix] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A07p044240.1_BraROA R-BRA-9918159 A07p044240.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A07p044370.1_BraROA R-BRA-1128126-2 A07p044370.1_BraROA [endosome] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A07p044370.1_BraROA R-BRA-5679348-2 A07p044370.1_BraROA [plasma membrane] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A07p044970.1_BraROA R-BRA-8854108-2 A07p044970.1_BraROA [cytosol] R-BRA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119556 Choline biosynthesis I none Brassica rapa A07p045090.1_BraROA R-BRA-9025443 A07p045090.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119325 Sphingolipid metabolism none Brassica rapa A07p045250.1_BraROA R-BRA-1125447 A07p045250.1_BraROA [plastid stroma] R-BRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119509 Histidine biosynthesis I none Brassica rapa A07p045330.1_BraROA R-BRA-9675481-3 A07p045330.1_BraROA [cytosol] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A07p045480.1_BraROA R-BRA-9826680-5 A07p045480.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A07p046010.1_BraROA R-BRA-4415101-2 A07p046010.1_BraROA [cytosol] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A07p046010.1_BraROA R-BRA-4415101-2 A07p046010.1_BraROA [cytosol] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A07p046260.1_BraROA R-BRA-1125014-2 A07p046260.1_BraROA [cytosol] R-BRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brassica rapa A07p046410.1_BraROA R-BRA-1128815-2 A07p046410.1_BraROA [cytosol] R-BRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119452 Galactose degradation II none Brassica rapa A07p046410.1_BraROA R-BRA-1128815-2 A07p046410.1_BraROA [cytosol] R-BRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119465 Sucrose biosynthesis none Brassica rapa A07p046530.1_BraROA R-BRA-1122656-2 A07p046530.1_BraROA [endosome] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A07p046530.1_BraROA R-BRA-5679312-2 A07p046530.1_BraROA [plasma membrane] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A07p046630.1_BraROA R-BRA-9640664-4 A07p046630.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A07p047200.1_BraROA R-BRA-8854108 A07p047200.1_BraROA [cytosol] R-BRA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119556 Choline biosynthesis I none Brassica rapa A07p047340.1_BraROA R-BRA-1122261 A07p047340.1_BraROA [plastid stroma] R-BRA-1119602 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119602 Phytyl-PP biosynthesis none Brassica rapa A07p047340.1_BraROA R-BRA-1122261 A07p047340.1_BraROA [plastid stroma] R-BRA-1119605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119605 Chlorophyll a biosynthesis II none Brassica rapa A07p047490.1_BraROA R-BRA-6787276-3 A07p047490.1_BraROA [plastid stroma] R-BRA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119261 Salicylate biosynthesis none Brassica rapa A07p047490.1_BraROA R-BRA-6787950-3 A07p047490.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A07p047500.1_BraROA R-BRA-6787276-4 A07p047500.1_BraROA [plastid stroma] R-BRA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119261 Salicylate biosynthesis none Brassica rapa A07p047500.1_BraROA R-BRA-6787950-4 A07p047500.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A07p047810.1_BraROA R-BRA-5632334-3 A07p047810.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A07p047810.1_BraROA R-BRA-5632197-3 phospho-A07p047810.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A07p047810.1_BraROA R-BRA-5632183-3 phospho-A07p047810.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A07p047810.1_BraROA R-BRA-5632334-3 A07p047810.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A07p048020.1_BraROA R-BRA-5632143 A07p048020.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A07p048020.1_BraROA R-BRA-5632143 A07p048020.1_BraROA [nucleoplasm] R-BRA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924451 Shoot (tiller) formation and regulation of tiller angle none Brassica rapa A07p048140.1_BraROA R-BRA-8868961-2 A07p048140.1_BraROA [plant-type vacuole membrane] R-BRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8868949 Intracellular auxin transport none Brassica rapa A07p048200.1_BraROA R-BRA-9826692-3 A07p048200.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A07p048700.1_BraROA R-BRA-1127899-3 A07p048700.1_BraROA [cytosol] R-BRA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119370 Sterol biosynthesis none Brassica rapa A07p049220.1_BraROA R-BRA-1124496-3 A07p049220.1_BraROA [cytosol] R-BRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119615 Mevalonate pathway none Brassica rapa A07p049260.1_BraROA R-BRA-8868866-3 A07p049260.1_BraROA [endoplasmic reticulum membrane] R-BRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8868949 Intracellular auxin transport none Brassica rapa A07p049740.1_BraROA R-BRA-1122242-4 A07p049740.1_BraROA [cytosol] R-BRA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119267 Phenylalanine degradation III none Brassica rapa A07p049920.1_BraROA R-BRA-9645941 A07p049920.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A07p050130.1_BraROA R-BRA-1130304-3 A07p050130.1_BraROA [cytosol] R-BRA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119291 Nitrate assimilation none Brassica rapa A07p050190.1_BraROA R-BRA-1128319-2 A07p050190.1_BraROA [cytosol] R-BRA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119341 Galactosylcyclitol biosynthesis none Brassica rapa A07p050570.1_BraROA R-BRA-1129934 A07p050570.1_BraROA [plastid stroma] R-BRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119430 Chorismate biosynthesis none Brassica rapa A07p050760.1_BraROA R-BRA-1123482 A07p050760.1_BraROA [plastid stroma] R-BRA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119367 Polyisoprenoid biosynthesis none Brassica rapa A07p050820.1_BraROA R-BRA-1126560-2 A07p050820.1_BraROA [cytosol] R-BRA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119516 Trehalose biosynthesis I none Brassica rapa A07p050910.1_BraROA R-BRA-1123733 A07p050910.1_BraROA [cytosol] R-BRA-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119484 Folate polyglutamylation II none Brassica rapa A07p050930.1_BraROA R-BRA-5632315-2 A07p050930.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A07p050930.1_BraROA R-BRA-5632284-2 phospho-A07p050930.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A07p050930.1_BraROA R-BRA-5632342-2 phospho-A07p050930.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A07p050930.1_BraROA R-BRA-5632315-2 A07p050930.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A07p051360.1_BraROA R-BRA-1128626-2 A07p051360.1_BraROA [cytosol] R-BRA-1119581 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119581 Thiosulfate disproportionation III (rhodanese) none Brassica rapa A07p051360.1_BraROA R-BRA-1128626-2 A07p051360.1_BraROA [cytosol] R-BRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119612 Cysteine degradation none Brassica rapa A07p051550.1_BraROA R-BRA-1129846 A07p051550.1_BraROA [mitochondrion] R-BRA-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119337 Proline degradation none Brassica rapa A07p051550.1_BraROA R-BRA-1129846 A07p051550.1_BraROA [mitochondrion] R-BRA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119458 Glutamate degradation none Brassica rapa A07p051560.1_BraROA R-BRA-1124949 A07p051560.1_BraROA [plastid stroma] R-BRA-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119308 Momilactone biosynthesis none Brassica rapa A07p051560.1_BraROA R-BRA-1124949 A07p051560.1_BraROA [plastid stroma] R-BRA-1119328 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119328 Oleoresin sesquiterpene volatiles biosynthesis none Brassica rapa A07p051560.1_BraROA R-BRA-1129421 A07p051560.1_BraROA [chloroplast] R-BRA-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119348 Ent-kaurene biosynthesis none Brassica rapa A07p051560.1_BraROA R-BRA-1124949 A07p051560.1_BraROA [plastid stroma] R-BRA-1119371 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119371 Oryzalexin A-F biosynthesis none Brassica rapa A07p051560.1_BraROA R-BRA-1124949 A07p051560.1_BraROA [plastid stroma] R-BRA-1119521 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119521 Oryzalexin S biosynthesis none Brassica rapa A07p051560.1_BraROA R-BRA-1129220 A07p051560.1_BraROA [cytosol] R-BRA-1119583 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119583 Phytocassane biosynthesis none Brassica rapa A07p051560.1_BraROA R-BRA-9610718 A07p051560.1_BraROA [plastid stroma] R-BRA-9610720 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9610720 Oryzalide A biosynthesis none Brassica rapa A07p051570.1_BraROA R-BRA-1123404-2 A07p051570.1_BraROA [peroxisomal matrix] R-BRA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119407 Ureide biosynthesis none Brassica rapa A07p051620.1_BraROA R-BRA-5149657 A07p051620.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A07p051620.1_BraROA R-BRA-1129239 A07p051620.1_BraROA [cytosol] R-BRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119570 Cytosolic glycolysis none Brassica rapa A07p051860.1_BraROA R-BRA-6787933-5 A07p051860.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A07p051880.1_BraROA R-BRA-1128200-3 A07p051880.1_BraROA [cytosol] R-BRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119316 Phenylpropanoid biosynthesis none Brassica rapa A07p052200.1_BraROA R-BRA-1125631 A07p052200.1_BraROA [cytosol] R-BRA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119321 Glycerol degradation I none Brassica rapa A07p052220.1_BraROA R-BRA-1126860-4 A07p052220.1_BraROA [cytosol] R-BRA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119321 Glycerol degradation I none Brassica rapa A07p052280.1_BraROA R-BRA-8987467 A07p052280.1_BraROA [chloroplast] R-BRA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119502 Allantoin degradation none Brassica rapa A08g503070.1_BraROA R-BRA-1122827-5 A08g503070.1_BraROA [cytosol] R-BRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119334 Ethylene biosynthesis from methionine none Brassica rapa A08g503130.1_BraROA R-BRA-1123745-3 A08g503130.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119260 Cardiolipin biosynthesis none Brassica rapa A08g503130.1_BraROA R-BRA-1123745-3 A08g503130.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119402 Phospholipid biosynthesis I none Brassica rapa A08g504250.1_BraROA R-BRA-1130394 A08g504250.1_BraROA [cytosol] R-BRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119452 Galactose degradation II none Brassica rapa A08g506750.1_BraROA R-BRA-9826691 A08g506750.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A08g506790.1_BraROA R-BRA-1128974-3 A08g506790.1_BraROA [cytosol] R-BRA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119287 Vitamin E biosynthesis none Brassica rapa A08g506790.1_BraROA R-BRA-1128974-3 A08g506790.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A08g508320.1_BraROA R-BRA-1129547-5 A08g508320.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A08g508320.1_BraROA R-BRA-1129547-5 A08g508320.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A08g508320.1_BraROA R-BRA-1129547-5 A08g508320.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A08g508330.1_BraROA R-BRA-1129547 A08g508330.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A08g508330.1_BraROA R-BRA-1129547 A08g508330.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A08g508330.1_BraROA R-BRA-1129547 A08g508330.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A08g508340.1_BraROA R-BRA-1129547-9 A08g508340.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A08g508340.1_BraROA R-BRA-1129547-9 A08g508340.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A08g508340.1_BraROA R-BRA-1129547-9 A08g508340.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A08g508600.1_BraROA R-BRA-1128980-4 A08g508600.1_BraROA [cytosol] R-BRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119586 Cyanate degradation none Brassica rapa A08g509020.1_BraROA R-BRA-5633387-2 A08g509020.1_BraROA [mitochondrial matrix] R-BRA-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119445 Beta-alanine biosynthesis II none Brassica rapa A08g510210.1_BraROA R-BRA-5632334-9 A08g510210.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A08g510210.1_BraROA R-BRA-5632197-9 phospho-A08g510210.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A08g510210.1_BraROA R-BRA-5632183-9 phospho-A08g510210.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A08g510210.1_BraROA R-BRA-5632334-9 A08g510210.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A08g510310.1_BraROA R-BRA-1123433-2 A08g510310.1_BraROA [cytosol] R-BRA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119332 Jasmonic acid biosynthesis none Brassica rapa A08g510310.1_BraROA R-BRA-1123433-2 A08g510310.1_BraROA [cytosol] R-BRA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119618 13-LOX and 13-HPL pathway none Brassica rapa A08p000250.1_BraROA R-BRA-1127723 A08p000250.1_BraROA [cytosol] R-BRA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119331 Cysteine biosynthesis I none Brassica rapa A08p000780.1_BraROA R-BRA-9611864-2 A08p000780.1_BraROA [mitochondrial matrix] R-BRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119479 Valine degradation none Brassica rapa A08p001180.1_BraROA R-BRA-5679401-2 A08p001180.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A08p001220.1_BraROA R-BRA-1128322-2 A08p001220.1_BraROA [cytosol] R-BRA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119384 NAD biosynthesis I (from aspartate) none Brassica rapa A08p001460.1_BraROA R-BRA-1124813 A08p001460.1_BraROA [mitochondrial matrix] R-BRA-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119337 Proline degradation none Brassica rapa A08p001460.1_BraROA R-BRA-8986570 A08p001460.1_BraROA [mitochondrial matrix] R-BRA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119365 Lysine degradation II none Brassica rapa A08p001460.1_BraROA R-BRA-9658682 A08p001460.1_BraROA [cytosol] R-BRA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119567 Beta-alanine biosynthesis I none Brassica rapa A08p001800.1_BraROA R-BRA-9612372-2 A08p001800.1_BraROA [mitochondrial matrix] R-BRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119612 Cysteine degradation none Brassica rapa A08p002130.1_BraROA R-BRA-1128071-2 A08p002130.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A08p002390.1_BraROA R-BRA-1129926-2 A08p002390.1_BraROA [cytosol] R-BRA-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Brassica rapa A08p002730.1_BraROA R-BRA-1125906-4 A08p002730.1_BraROA [cytosol] R-BRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119276 Choline biosynthesis III none Brassica rapa A08p002780.1_BraROA R-BRA-1250417 A08p002780.1_BraROA [cytosol] R-BRA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119374 Abscisic acid biosynthesis none Brassica rapa A08p002940.1_BraROA R-BRA-1122541 A08p002940.1_BraROA [cytosol] R-BRA-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Brassica rapa A08p002940.1_BraROA R-BRA-1122541 A08p002940.1_BraROA [cytosol] R-BRA-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Brassica rapa A08p003050.1_BraROA R-BRA-1125997-3 A08p003050.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A08p003050.1_BraROA R-BRA-1125997-3 A08p003050.1_BraROA [nucleoplasm] R-BRA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030680 Crown root development none Brassica rapa A08p003150.1_BraROA R-BRA-5632264-4 A08p003150.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A08p003160.1_BraROA R-BRA-9675354-2 A08p003160.1_BraROA [nucleoplasm] R-BRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675508 Root elongation none Brassica rapa A08p003160.1_BraROA R-BRA-9675335-2 A08p003160.1_BraROA [mitochondrial matrix] R-BRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675508 Root elongation none Brassica rapa A08p003500.1_BraROA R-BRA-1122541-3 A08p003500.1_BraROA [cytosol] R-BRA-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Brassica rapa A08p003500.1_BraROA R-BRA-1122541-3 A08p003500.1_BraROA [cytosol] R-BRA-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Brassica rapa A08p003550.1_BraROA R-BRA-9639088-4 A08p003550.1_BraROA [plasma membrane] R-BRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639136 Response to Aluminum stress none Brassica rapa A08p003670.1_BraROA R-BRA-8868904-2 A08p003670.1_BraROA [endoplasmic reticulum membrane] R-BRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8868949 Intracellular auxin transport none Brassica rapa A08p003700.1_BraROA R-BRA-1127089-5 A08p003700.1_BraROA [cytosol] R-BRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119465 Sucrose biosynthesis none Brassica rapa A08p003760.1_BraROA R-BRA-1127928-2 A08p003760.1_BraROA [cytosol] R-BRA-1119595 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119595 Mannose degradation none Brassica rapa A08p003760.1_BraROA R-BRA-1127928-2 A08p003760.1_BraROA [cytosol] R-BRA-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119601 Trehalose degradation II none Brassica rapa A08p003760.1_BraROA R-BRA-1127928-2 A08p003760.1_BraROA [cytosol] R-BRA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119628 GDP-mannose metabolism none Brassica rapa A08p003780.1_BraROA R-BRA-1123867 A08p003780.1_BraROA [cytosol] R-BRA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119370 Sterol biosynthesis none Brassica rapa A08p003850.1_BraROA R-BRA-5632121 A08p003850.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A08p004020.1_BraROA R-BRA-1122974-5 A08p004020.1_BraROA [mitochondrial matrix] R-BRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119479 Valine degradation none Brassica rapa A08p005320.1_BraROA R-BRA-1130456 A08p005320.1_BraROA [plastid stroma] R-BRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119430 Chorismate biosynthesis none Brassica rapa A08p007000.1_BraROA R-BRA-9916252-2 OsEGT1 [nucleoplasm] R-BRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9916190 Root angle formation: elongation and curvature response none Brassica rapa A08p007200.1_BraROA R-BRA-8986682 A08p007200.1_BraROA [extracellular region] R-BRA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8986768 Anther and pollen development none Brassica rapa A08p007730.1_BraROA R-BRA-9640753 A08p007730.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A08p007730.1_BraROA R-BRA-9640753 A08p007730.1_BraROA [nucleoplasm] R-BRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675824 DNA replication Initiation none Brassica rapa A08p008440.1_BraROA R-BRA-1129029 A08p008440.1_BraROA [cytosol] R-BRA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119501 S-adenosyl-L-methionine cycle none Brassica rapa A08p009080.1_BraROA R-BRA-1124939-3 A08p009080.1_BraROA [cytosol] R-BRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119540 Leucine biosynthesis none Brassica rapa A08p010170.1_BraROA R-BRA-8854121 A08p010170.1_BraROA [cytosol] R-BRA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119556 Choline biosynthesis I none Brassica rapa A08p010440.1_BraROA R-BRA-1126728 A08p010440.1_BraROA [plastid stroma] R-BRA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119424 Plastid glycolysis none Brassica rapa A08p010570.1_BraROA R-BRA-1129187-2 A08p010570.1_BraROA [cytosol] R-BRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119276 Choline biosynthesis III none Brassica rapa A08p011960.1_BraROA R-BRA-8987574-2 A08p011960.1_BraROA [mitochondrial matrix] R-BRA-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119311 Glycine biosynthesis I none Brassica rapa A08p012360.1_BraROA R-BRA-9675481-2 A08p012360.1_BraROA [cytosol] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A08p013540.1_BraROA R-BRA-8987554-3 A08p013540.1_BraROA [mitochondrial matrix] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A08p014150.1_BraROA R-BRA-1122783-3 A08p014150.1_BraROA [chloroplast stroma] R-BRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119402 Phospholipid biosynthesis I none Brassica rapa A08p014230.1_BraROA R-BRA-5149678 A08p014230.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A08p014350.1_BraROA R-BRA-9618197-4 A08p014350.1_BraROA [plasma membrane] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A08p014960.1_BraROA R-BRA-1129629-2 A08p014960.1_BraROA [plastid stroma] R-BRA-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119293 Glutamine biosynthesis I none Brassica rapa A08p014960.1_BraROA R-BRA-1129629-2 A08p014960.1_BraROA [plastid stroma] R-BRA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119443 Ammonia assimilation cycle none Brassica rapa A08p015900.1_BraROA R-BRA-1128902-2 A08p015900.1_BraROA [cytosol] R-BRA-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119271 Threonine degradation none Brassica rapa A08p015900.1_BraROA R-BRA-1128902-2 A08p015900.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A08p016900.1_BraROA R-BRA-1122892-7 A08p016900.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A08p016900.1_BraROA R-BRA-1122892-7 A08p016900.1_BraROA [nucleoplasm] R-BRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030557 Lateral root initiation none Brassica rapa A08p016900.1_BraROA R-BRA-1122892-7 A08p016900.1_BraROA [nucleoplasm] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A08p017350.1_BraROA R-BRA-1126794 A08p017350.1_BraROA [cytosol] R-BRA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119331 Cysteine biosynthesis I none Brassica rapa A08p018100.1_BraROA R-BRA-1129390-2 A08p018100.1_BraROA [mitochondrion] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A08p018110.1_BraROA R-BRA-1129390-3 A08p018110.1_BraROA [mitochondrion] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A08p018960.1_BraROA R-BRA-9608930-2 A08p018960.1_BraROA [nucleoplasm] R-BRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934036 Long day regulated expression of florigens none Brassica rapa A08p019280.1_BraROA R-BRA-9025819 A08p019280.1_BraROA [plasma membrane] R-BRA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9025727 Iron uptake and transport in root vascular system none Brassica rapa A08p019960.1_BraROA R-BRA-1129175 A08p019960.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A08p020020.1_BraROA R-BRA-4415060-2 A08p020020.1_BraROA [plasma membrane] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A08p020020.1_BraROA R-BRA-4415065-2 phospho-A08p020020.1_BraROA [plasma membrane] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A08p020440.1_BraROA R-BRA-5632139 A08p020440.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A08p021520.1_BraROA R-BRA-1125489 A08p021520.1_BraROA [Golgi membrane] R-BRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119428 GDP-D-rhamnose biosynthesis none Brassica rapa A08p021520.1_BraROA R-BRA-1127743 A08p021520.1_BraROA [cytosol] R-BRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119428 GDP-D-rhamnose biosynthesis none Brassica rapa A08p021520.1_BraROA R-BRA-1125489 A08p021520.1_BraROA [Golgi membrane] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A08p021520.1_BraROA R-BRA-1125489 A08p021520.1_BraROA [Golgi membrane] R-BRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brassica rapa A08p021520.1_BraROA R-BRA-1127743 A08p021520.1_BraROA [cytosol] R-BRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brassica rapa A08p021770.1_BraROA R-BRA-9025487 A08p021770.1_BraROA [cytosol] R-BRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119325 Sphingolipid metabolism none Brassica rapa A08p021860.1_BraROA R-BRA-1128069-2 A08p021860.1_BraROA [cytosol] R-BRA-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Brassica rapa A08p021860.1_BraROA R-BRA-1128069-2 A08p021860.1_BraROA [cytosol] R-BRA-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Brassica rapa A08p022120.1_BraROA R-BRA-1128624 A08p022120.1_BraROA [mitochondrial inner membrane] R-BRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119479 Valine degradation none Brassica rapa A08p023110.1_BraROA R-BRA-1127357 A08p023110.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A08p023110.1_BraROA R-BRA-1127357 A08p023110.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A08p023220.1_BraROA R-BRA-9618156-3 A08p023220.1_BraROA [plasma membrane] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A08p023400.1_BraROA R-BRA-1123561-2 A08p023400.1_BraROA [cytosol] R-BRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119624 Methionine salvage pathway none Brassica rapa A08p023570.1_BraROA R-BRA-1128707-2 A08p023570.1_BraROA [cytosol] R-BRA-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Brassica rapa A08p023570.1_BraROA R-BRA-1128707-2 A08p023570.1_BraROA [cytosol] R-BRA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119370 Sterol biosynthesis none Brassica rapa A08p023570.1_BraROA R-BRA-1128707-2 A08p023570.1_BraROA [cytosol] R-BRA-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119439 Cholesterol biosynthesis III (via desmosterol) none Brassica rapa A08p023570.1_BraROA R-BRA-1128707-2 A08p023570.1_BraROA [cytosol] R-BRA-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119559 Cholesterol biosynthesis I none Brassica rapa A08p023790.1_BraROA R-BRA-1128745 A08p023790.1_BraROA [plastid stroma] R-BRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119464 Methylerythritol phosphate pathway none Brassica rapa A08p024410.1_BraROA R-BRA-5606478 A08p024410.1_BraROA [plastid stroma] R-BRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119419 Lysine biosynthesis VI none Brassica rapa A08p024620.1_BraROA R-BRA-5654911-2 A08p024620.1_BraROA [Golgi lumen] R-BRA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5654909 Xylan biosynthesis none Brassica rapa A08p025170.1_BraROA R-BRA-1126875-4 A08p025170.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A08p025410.1_BraROA R-BRA-1127502-2 A08p025410.1_BraROA [cytosol] R-BRA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119394 Pantothenate and coenzyme A biosynthesis III none Brassica rapa A08p025570.1_BraROA R-BRA-1128054 A08p025570.1_BraROA [mitochondrial matrix] R-BRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119479 Valine degradation none Brassica rapa A08p025580.1_BraROA R-BRA-6787933-3 A08p025580.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A08p025740.1_BraROA R-BRA-6788065-3 A08p025740.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A08p026290.1_BraROA R-BRA-1123148-2 A08p026290.1_BraROA [cytosol] R-BRA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119300 Glycolipid desaturation none Brassica rapa A08p026730.1_BraROA R-BRA-9920292-5 A08p026730.1_BraROA [nucleoplasm] R-BRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934108 Short day regulated expression of florigens none Brassica rapa A08p027190.1_BraROA R-BRA-1126165 A08p027190.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A08p027190.1_BraROA R-BRA-5608120 A08p027190.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A08p029310.1_BraROA R-BRA-1130136 A08p029310.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A08p029310.1_BraROA R-BRA-1130136 A08p029310.1_BraROA [mitochondrial matrix] R-BRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119540 Leucine biosynthesis none Brassica rapa A08p029350.1_BraROA R-BRA-1129187 A08p029350.1_BraROA [cytosol] R-BRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119276 Choline biosynthesis III none Brassica rapa A08p029510.1_BraROA R-BRA-1130141 A08p029510.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A08p029510.1_BraROA R-BRA-1130141 A08p029510.1_BraROA [mitochondrial matrix] R-BRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119540 Leucine biosynthesis none Brassica rapa A08p029850.1_BraROA R-BRA-9025699-5 A08p029850.1_BraROA [plasma membrane] R-BRA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8858053 Polar auxin transport none Brassica rapa A08p029850.1_BraROA R-BRA-9025699-5 A08p029850.1_BraROA [plasma membrane] R-BRA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9025727 Iron uptake and transport in root vascular system none Brassica rapa A08p030130.1_BraROA R-BRA-1127815 A08p030130.1_BraROA [cytosol] R-BRA-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119450 Homocysteine biosynthesis none Brassica rapa A08p030280.1_BraROA R-BRA-9826620-7 HOX12/ OsGT1 [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A08p030280.1_BraROA R-BRA-9826620-7 HOX12/ OsGT1 [nucleoplasm] R-BRA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Brassica rapa A08p030860.1_BraROA R-BRA-1123895-2 A08p030860.1_BraROA [cytosol] R-BRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119334 Ethylene biosynthesis from methionine none Brassica rapa A08p030860.1_BraROA R-BRA-1123895-2 A08p030860.1_BraROA [cytosol] R-BRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119624 Methionine salvage pathway none Brassica rapa A08p031190.1_BraROA R-BRA-1130084-5 A08p031190.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A08p031690.1_BraROA R-BRA-1123717-3 A08p031690.1_BraROA [cytosol] R-BRA-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119395 Maackiain biosynthesis none Brassica rapa A08p031690.1_BraROA R-BRA-1123717-3 A08p031690.1_BraROA [cytosol] R-BRA-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119453 Medicarpin biosynthesis none Brassica rapa A08p031850.1_BraROA R-BRA-9826692-4 A08p031850.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A08p032090.1_BraROA R-BRA-1123561 A08p032090.1_BraROA [cytosol] R-BRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119624 Methionine salvage pathway none Brassica rapa A08p032600.1_BraROA R-BRA-9618186-3 A08p032600.1_BraROA [plant-type vacuole membrane] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A08p032630.1_BraROA R-BRA-5608154 A08p032630.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A08p034230.1_BraROA R-BRA-1130231 A08p034230.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119325 Sphingolipid metabolism none Brassica rapa A08p034450.1_BraROA R-BRA-5654942 A08p034450.1_BraROA [Golgi lumen] R-BRA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5654909 Xylan biosynthesis none Brassica rapa A08p035060.1_BraROA R-BRA-1128637-2 A08p035060.1_BraROA [chloroplast] R-BRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119494 Tryptophan biosynthesis none Brassica rapa A08p035070.1_BraROA R-BRA-5679470-2 A08p035070.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A08p035280.1_BraROA R-BRA-9826604 A08p035280.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A08p035880.1_BraROA R-BRA-9640752 A08p035880.1_BraROA [nucleoplasm] R-BRA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640882 Assembly of pre-replication complex none Brassica rapa A08p035880.1_BraROA R-BRA-9640752 A08p035880.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A08p036280.1_BraROA R-BRA-1125638-2 A08p036280.1_BraROA [cytosol] R-BRA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119516 Trehalose biosynthesis I none Brassica rapa A08p036570.1_BraROA R-BRA-8987548-5 A08p036570.1_BraROA [peroxisomal matrix] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A08p036630.1_BraROA R-BRA-1128632-2 A08p036630.1_BraROA [cytosol] R-BRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119465 Sucrose biosynthesis none Brassica rapa A08p036630.1_BraROA R-BRA-1128632-2 A08p036630.1_BraROA [cytosol] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A08p036710.1_BraROA R-BRA-1128126-3 A08p036710.1_BraROA [endosome] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A08p036710.1_BraROA R-BRA-5679348-3 A08p036710.1_BraROA [plasma membrane] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A08p036860.1_BraROA R-BRA-9826680-4 A08p036860.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A08p036910.1_BraROA R-BRA-1129934-3 A08p036910.1_BraROA [plastid stroma] R-BRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119430 Chorismate biosynthesis none Brassica rapa A08p036930.1_BraROA R-BRA-5632238-3 A08p036930.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A08p036930.1_BraROA R-BRA-5632238-3 A08p036930.1_BraROA [cytosol] R-BRA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934257 Transition from vegetative to reproductive shoot apical meristem none Brassica rapa A08p036930.1_BraROA R-BRA-9927894-3 A08p036930.1_BraROA [nucleoplasm] R-BRA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934257 Transition from vegetative to reproductive shoot apical meristem none Brassica rapa A08p036930.1_BraROA R-BRA-5632238-3 A08p036930.1_BraROA [cytosol] R-BRA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9609102 Flower development none Brassica rapa A08p036930.1_BraROA R-BRA-5632238-3 A08p036930.1_BraROA [cytosol] R-BRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928831 Severe drought none Brassica rapa A08p036930.1_BraROA R-BRA-9927894-3 A08p036930.1_BraROA [nucleoplasm] R-BRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928831 Severe drought none Brassica rapa A08p037060.1_BraROA R-BRA-8987574 A08p037060.1_BraROA [mitochondrial matrix] R-BRA-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119311 Glycine biosynthesis I none Brassica rapa A08p037280.1_BraROA R-BRA-9675877 A08p037280.1_BraROA [nucleoplasm] R-BRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675815 Leading strand synthesis none Brassica rapa A08p038160.1_BraROA R-BRA-1126344 A08p038160.1_BraROA [plastid stroma] R-BRA-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119529 Sulfate activation for sulfonation none Brassica rapa A08p038220.1_BraROA R-BRA-5608137-3 A08p038220.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A08p038420.1_BraROA R-BRA-5632334-4 A08p038420.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A08p038420.1_BraROA R-BRA-5632197-4 phospho-A08p038420.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A08p038420.1_BraROA R-BRA-5632183-4 phospho-A08p038420.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A08p038420.1_BraROA R-BRA-5632334-4 A08p038420.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A08p038520.1_BraROA R-BRA-5608125-3 A08p038520.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A08p039170.1_BraROA R-BRA-9640664 A08p039170.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A08p039250.1_BraROA R-BRA-1125014-3 A08p039250.1_BraROA [cytosol] R-BRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brassica rapa A08p039360.1_BraROA R-BRA-5632264-2 A08p039360.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A08p040380.1_BraROA R-BRA-1125504-2 A08p040380.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A08p040380.1_BraROA R-BRA-1125504-2 A08p040380.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A08p040380.1_BraROA R-BRA-1125504-2 A08p040380.1_BraROA [cytosol] R-BRA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119295 Homoserine biosynthesis none Brassica rapa A08p040380.1_BraROA R-BRA-5606489-2 A08p040380.1_BraROA [plastid stroma] R-BRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119419 Lysine biosynthesis VI none Brassica rapa A08p040650.1_BraROA R-BRA-5655076-2 A08p040650.1_BraROA [Golgi lumen] R-BRA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5655101 Xyloglucan biosynthesis none Brassica rapa A08p040910.1_BraROA R-BRA-1122785 A08p040910.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A08p040910.1_BraROA R-BRA-1126726 A08p040910.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A08p040910.1_BraROA R-BRA-1122785 A08p040910.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A08p040910.1_BraROA R-BRA-1126726 A08p040910.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A08p040910.1_BraROA R-BRA-1122785 A08p040910.1_BraROA [cytosol] R-BRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119570 Cytosolic glycolysis none Brassica rapa A08p041250.1_BraROA R-BRA-5608218-2 A08p041250.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A08p041250.1_BraROA R-BRA-5608218-2 A08p041250.1_BraROA [nucleoplasm] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A08p041250.1_BraROA R-BRA-9658968-2 A08p041250.1_BraROA [cytosol] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A08p041300.1_BraROA R-BRA-1130394-3 A08p041300.1_BraROA [cytosol] R-BRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119452 Galactose degradation II none Brassica rapa A08p041430.1_BraROA R-BRA-9639892 A08p041430.1_BraROA [cell wall] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A08p041820.1_BraROA R-BRA-1128606-2 A08p041820.1_BraROA [mitochondrial matrix] R-BRA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119365 Lysine degradation II none Brassica rapa A08p041820.1_BraROA R-BRA-1173244-2 A08p041820.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A08p041830.1_BraROA R-BRA-8987488 A08p041830.1_BraROA [mitochondrial matrix] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A08p041900.1_BraROA R-BRA-1127243 A08p041900.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A08p041900.1_BraROA R-BRA-9918268 soluble Starch Synthase (SSIIIA/SSIII-2) [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A08p042890.1_BraROA R-BRA-1122974-8 A08p042890.1_BraROA [mitochondrial matrix] R-BRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119479 Valine degradation none Brassica rapa A08p042900.1_BraROA R-BRA-1122974-4 A08p042900.1_BraROA [mitochondrial matrix] R-BRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119479 Valine degradation none Brassica rapa A08p043750.1_BraROA R-BRA-1128298-2 A08p043750.1_BraROA [cytosol] R-BRA-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119271 Threonine degradation none Brassica rapa A08p043750.1_BraROA R-BRA-1128298-2 A08p043750.1_BraROA [cytosol] R-BRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119610 Biotin biosynthesis II none Brassica rapa A08p043830.1_BraROA R-BRA-9826669-3 OsYABBY6 [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A08p043870.1_BraROA R-BRA-5632111-2 A08p043870.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A08p043870.1_BraROA R-BRA-5632216-2 phospho-A08p043870.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A08p044000.1_BraROA R-BRA-1124560-3 A08p044000.1_BraROA [cytosol] R-BRA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119563 UDP-D-xylose biosynthesis none Brassica rapa A08p044000.1_BraROA R-BRA-9681903-3 A08p044000.1_BraROA [Golgi lumen] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A08p044000.1_BraROA R-BRA-1124560-3 A08p044000.1_BraROA [cytosol] R-BRA-5654894 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5654894 UDP-D-apiose biosynthesis none Brassica rapa A08p044950.1_BraROA R-BRA-9675297-2 A08p044950.1_BraROA [mitochondrion] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A08p045680.1_BraROA R-BRA-8933738-2 A08p045680.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A08p045720.1_BraROA R-BRA-5225766 A08p045720.1_BraROA [nucleoplasm] R-BRA-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5225756 Ethylene mediated signaling none Brassica rapa A08p045780.1_BraROA R-BRA-1122892-3 A08p045780.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A08p045780.1_BraROA R-BRA-1122892-3 A08p045780.1_BraROA [nucleoplasm] R-BRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030557 Lateral root initiation none Brassica rapa A08p045780.1_BraROA R-BRA-1122892-3 A08p045780.1_BraROA [nucleoplasm] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A08p045870.1_BraROA R-BRA-5632268-2 A08p045870.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A08p046430.1_BraROA R-BRA-9916298-2 OsEXPA3 [extracellular region] R-BRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9916190 Root angle formation: elongation and curvature response none Brassica rapa A08p046480.1_BraROA R-BRA-8933759 A08p046480.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A09g500220.1_BraROA R-BRA-5632110-2 A09g500220.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A09g500220.1_BraROA R-BRA-5632110-2 A09g500220.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A09g502290.1_BraROA R-BRA-1126888-3 A09g502290.1_BraROA [cytosol] R-BRA-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119360 Fructan biosynthesis none Brassica rapa A09g513390.1_BraROA R-BRA-9618186-4 A09g513390.1_BraROA [plant-type vacuole membrane] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A09g515140.1_BraROA R-BRA-9928801 A09g515140.1_BraROA [nucleoplasm] R-BRA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928995 Drought escape (DE) via ABA-dependent pathway none Brassica rapa A09g515150.1_BraROA R-BRA-9025430-2 A09g515150.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119325 Sphingolipid metabolism none Brassica rapa A09g515710.1_BraROA R-BRA-1126549-3 A09g515710.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A09g516440.1_BraROA R-BRA-6788234 A09g516440.1_BraROA [cytosol] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A09g516440.1_BraROA R-BRA-1124041 A09g516440.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A09g517460.1_BraROA R-BRA-6788120 A09g517460.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A09g517460.1_BraROA R-BRA-6788120 A09g517460.1_BraROA [nucleoplasm] R-BRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9766881 TF network involved in salinity response none Brassica rapa A09g518270.1_BraROA R-BRA-1123860 A09g518270.1_BraROA [cytosol] R-BRA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119292 Cytokinins 7-N-glucoside biosynthesis none Brassica rapa A09g518270.1_BraROA R-BRA-1123860 A09g518270.1_BraROA [cytosol] R-BRA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119375 Cytokinins 9-N-glucoside biosynthesis none Brassica rapa A09g518270.1_BraROA R-BRA-1123860 A09g518270.1_BraROA [cytosol] R-BRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119473 Cytokinins-O-glucoside biosynthesis none Brassica rapa A09g518570.1_BraROA R-BRA-5632157 A09g518570.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A09g518570.1_BraROA R-BRA-5632157 A09g518570.1_BraROA [nucleoplasm] R-BRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5654828 Strigolactone signaling none Brassica rapa A09g518830.1_BraROA R-BRA-1127873-4 A09g518830.1_BraROA [plastid stroma] R-BRA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119424 Plastid glycolysis none Brassica rapa A09g518830.1_BraROA R-BRA-1127873-4 A09g518830.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A09g518840.1_BraROA R-BRA-5608218 A09g518840.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A09g518840.1_BraROA R-BRA-5608218 A09g518840.1_BraROA [nucleoplasm] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A09g518840.1_BraROA R-BRA-9658968 A09g518840.1_BraROA [cytosol] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A09g519120.1_BraROA R-BRA-1124560 A09g519120.1_BraROA [cytosol] R-BRA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119563 UDP-D-xylose biosynthesis none Brassica rapa A09g519120.1_BraROA R-BRA-9681903 A09g519120.1_BraROA [Golgi lumen] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A09g519120.1_BraROA R-BRA-1124560 A09g519120.1_BraROA [cytosol] R-BRA-5654894 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5654894 UDP-D-apiose biosynthesis none Brassica rapa A09p000510.1_BraROA R-BRA-5146758 A09p000510.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A09p000530.1_BraROA R-BRA-1125670 A09p000530.1_BraROA [cytosol] R-BRA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119393 Asparagine degradation I none Brassica rapa A09p001580.1_BraROA R-BRA-9640745-2 A09p001580.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A09p001580.1_BraROA R-BRA-9640745-2 A09p001580.1_BraROA [nucleoplasm] R-BRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675824 DNA replication Initiation none Brassica rapa A09p001750.1_BraROA R-BRA-1126115 A09p001750.1_BraROA [cytosol] R-BRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119452 Galactose degradation II none Brassica rapa A09p001750.1_BraROA R-BRA-1126115 A09p001750.1_BraROA [cytosol] R-BRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119465 Sucrose biosynthesis none Brassica rapa A09p001940.1_BraROA R-BRA-9639810-2 A09p001940.1_BraROA [cell wall] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A09p002030.1_BraROA R-BRA-1129781-2 A09p002030.1_BraROA [chloroplast] R-BRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119494 Tryptophan biosynthesis none Brassica rapa A09p002220.1_BraROA R-BRA-1128337 A09p002220.1_BraROA [plastid stroma] R-BRA-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119308 Momilactone biosynthesis none Brassica rapa A09p002220.1_BraROA R-BRA-1128244 A09p002220.1_BraROA [chloroplast] R-BRA-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119348 Ent-kaurene biosynthesis none Brassica rapa A09p002510.1_BraROA R-BRA-5608164-5 A09p002510.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A09p002510.1_BraROA R-BRA-5608164-5 A09p002510.1_BraROA [nucleoplasm] R-BRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030557 Lateral root initiation none Brassica rapa A09p002510.1_BraROA R-BRA-5608164-5 A09p002510.1_BraROA [nucleoplasm] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A09p002510.1_BraROA R-BRA-9658967-5 A09p002510.1_BraROA [cytosol] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A09p003160.1_BraROA R-BRA-8879006-2 A09p003160.1_BraROA [nucleoplasm] R-BRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8879007 Response to cold temperature none Brassica rapa A09p004040.1_BraROA R-BRA-9766876-3 A09p004040.1_BraROA [nucleoplasm] R-BRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9766881 TF network involved in salinity response none Brassica rapa A09p004040.1_BraROA R-BRA-9766876-3 A09p004040.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A09p004110.1_BraROA R-BRA-1126095 A09p004110.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A09p004190.1_BraROA R-BRA-6787262-4 A09p004190.1_BraROA [nucleoplasm] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A09p004500.1_BraROA R-BRA-1126998-2 A09p004500.1_BraROA [cytosol] R-BRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119615 Mevalonate pathway none Brassica rapa A09p004790.1_BraROA R-BRA-9640789 A09p004790.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A09p005170.1_BraROA R-BRA-9035785 A09p005170.1_BraROA [nucleoplasm] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A09p005240.1_BraROA R-BRA-5632268-5 A09p005240.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A09p005490.1_BraROA R-BRA-1129924-2 A09p005490.1_BraROA [cytosol] R-BRA-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119342 Gamma-glutamyl cycle none Brassica rapa A09p005490.1_BraROA R-BRA-1129924-2 A09p005490.1_BraROA [cytosol] R-BRA-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119483 Glutathione biosynthesis none Brassica rapa A09p005540.1_BraROA R-BRA-1127597-2 A09p005540.1_BraROA [cytosol] R-BRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119615 Mevalonate pathway none Brassica rapa A09p005620.1_BraROA R-BRA-9640783 A09p005620.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A09p006100.1_BraROA R-BRA-9826674 A09p006100.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A09p006540.1_BraROA R-BRA-1124809-3 A09p006540.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A09p006950.1_BraROA R-BRA-8933784-2 A09p006950.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A09p007580.1_BraROA R-BRA-1129355 A09p007580.1_BraROA [plastid] R-BRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119403 Removal of superoxide radicals none Brassica rapa A09p007920.1_BraROA R-BRA-8933833 A09p007920.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A09p007920.1_BraROA R-BRA-8933833 A09p007920.1_BraROA [nucleoplasm] R-BRA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928995 Drought escape (DE) via ABA-dependent pathway none Brassica rapa A09p008170.1_BraROA R-BRA-5608102 A09p008170.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A09p008170.1_BraROA R-BRA-1123690-3 A09p008170.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A09p008600.1_BraROA R-BRA-1126916-2 A09p008600.1_BraROA [plastid stroma] R-BRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119464 Methylerythritol phosphate pathway none Brassica rapa A09p008900.1_BraROA R-BRA-6787185 A09p008900.1_BraROA [nucleoplasm] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A09p009150.1_BraROA R-BRA-4827081-2 A09p009150.1_BraROA [plastid stroma] R-BRA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-4827054 Tetrapyrrole biosynthesis I none Brassica rapa A09p009260.1_BraROA R-BRA-1128989-2 A09p009260.1_BraROA [plastid stroma] R-BRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119509 Histidine biosynthesis I none Brassica rapa A09p009460.1_BraROA R-BRA-1128950-2 A09p009460.1_BraROA [cytosol] R-BRA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119379 Flavin biosynthesis none Brassica rapa A09p009490.1_BraROA R-BRA-1123575 A09p009490.1_BraROA [cytosol] R-BRA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119297 Beta-alanine biosynthesis III none Brassica rapa A09p009800.1_BraROA R-BRA-1129082-2 A09p009800.1_BraROA [mitochondrial matrix] R-BRA-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119445 Beta-alanine biosynthesis II none Brassica rapa A09p009950.1_BraROA R-BRA-9640777-3 A09p009950.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A09p009950.1_BraROA R-BRA-9640777-3 A09p009950.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A09p009960.1_BraROA R-BRA-5632192 A09p009960.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A09p010060.1_BraROA R-BRA-5083827 A09p010060.1_BraROA [mitochondrial matrix] R-BRA-1119319 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119319 Alanine biosynthesis III none Brassica rapa A09p010060.1_BraROA R-BRA-5083827 A09p010060.1_BraROA [mitochondrial matrix] R-BRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119612 Cysteine degradation none Brassica rapa A09p010110.1_BraROA R-BRA-1123895-8 A09p010110.1_BraROA [cytosol] R-BRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119334 Ethylene biosynthesis from methionine none Brassica rapa A09p010110.1_BraROA R-BRA-1123895-8 A09p010110.1_BraROA [cytosol] R-BRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119624 Methionine salvage pathway none Brassica rapa A09p010430.1_BraROA R-BRA-8879009-2 A09p010430.1_BraROA [nucleoplasm] R-BRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8879007 Response to cold temperature none Brassica rapa A09p010520.1_BraROA R-BRA-4754219 A09p010520.1_BraROA [plastid stroma] R-BRA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119449 Carotenoid biosynthesis none Brassica rapa A09p010770.1_BraROA R-BRA-1129247 A09p010770.1_BraROA [mitochondrial inner membrane] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A09p010810.1_BraROA R-BRA-9826620-6 HOX12/ OsGT1 [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A09p010810.1_BraROA R-BRA-9826620-6 HOX12/ OsGT1 [nucleoplasm] R-BRA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Brassica rapa A09p011180.1_BraROA R-BRA-1126440 A09p011180.1_BraROA [plastid stroma] R-BRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119430 Chorismate biosynthesis none Brassica rapa A09p011280.1_BraROA R-BRA-8868994 A09p011280.1_BraROA [endoplasmic reticulum membrane] R-BRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8868949 Intracellular auxin transport none Brassica rapa A09p011450.1_BraROA R-BRA-8987571 A09p011450.1_BraROA [peroxisomal matrix] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A09p011510.1_BraROA R-BRA-5146760 A09p011510.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A09p011550.1_BraROA R-BRA-1126269 A09p011550.1_BraROA [mitochondrial matrix] R-BRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119479 Valine degradation none Brassica rapa A09p011860.1_BraROA R-BRA-5655076-6 A09p011860.1_BraROA [Golgi lumen] R-BRA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5655101 Xyloglucan biosynthesis none Brassica rapa A09p012140.1_BraROA R-BRA-1125093 A09p012140.1_BraROA [cytosol] R-BRA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119456 Brassinosteroid biosynthesis II none Brassica rapa A09p012390.1_BraROA R-BRA-1125974 A09p012390.1_BraROA [cytosol] R-BRA-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119262 Threonine biosynthesis from homoserine none Brassica rapa A09p012390.1_BraROA R-BRA-1125974 A09p012390.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A09p012400.1_BraROA R-BRA-5221147-2 A09p012400.1_BraROA [cytosol] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A09p012550.1_BraROA R-BRA-8868994-4 A09p012550.1_BraROA [endoplasmic reticulum membrane] R-BRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8868949 Intracellular auxin transport none Brassica rapa A09p013270.1_BraROA R-BRA-9826620 HOX12/ OsGT1 [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A09p013270.1_BraROA R-BRA-9826620 HOX12/ OsGT1 [nucleoplasm] R-BRA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Brassica rapa A09p013380.1_BraROA R-BRA-1123210 A09p013380.1_BraROA [cytosol] R-BRA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119516 Trehalose biosynthesis I none Brassica rapa A09p013720.1_BraROA R-BRA-1130059-2 A09p013720.1_BraROA [cytosol] R-BRA-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119262 Threonine biosynthesis from homoserine none Brassica rapa A09p014040.1_BraROA R-BRA-1129547-12 A09p014040.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A09p014040.1_BraROA R-BRA-1129547-12 A09p014040.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A09p014040.1_BraROA R-BRA-1129547-12 A09p014040.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A09p014060.1_BraROA R-BRA-1127523-5 A09p014060.1_BraROA [cytosol] R-BRA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Brassica rapa A09p014310.1_BraROA R-BRA-1122881-6 A09p014310.1_BraROA [cytosol] R-BRA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Brassica rapa A09p014310.1_BraROA R-BRA-1122881-6 A09p014310.1_BraROA [cytosol] R-BRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119438 Secologanin and strictosidine biosynthesis none Brassica rapa A09p014310.1_BraROA R-BRA-1122881-6 A09p014310.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A09p014350.1_BraROA R-BRA-1122881-4 A09p014350.1_BraROA [cytosol] R-BRA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Brassica rapa A09p014350.1_BraROA R-BRA-1122881-4 A09p014350.1_BraROA [cytosol] R-BRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119438 Secologanin and strictosidine biosynthesis none Brassica rapa A09p014350.1_BraROA R-BRA-1122881-4 A09p014350.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A09p014380.1_BraROA R-BRA-5655057-2 A09p014380.1_BraROA [Golgi lumen] R-BRA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5655101 Xyloglucan biosynthesis none Brassica rapa A09p014740.1_BraROA R-BRA-1126888-4 A09p014740.1_BraROA [cytosol] R-BRA-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119360 Fructan biosynthesis none Brassica rapa A09p014940.1_BraROA R-BRA-9639892-3 A09p014940.1_BraROA [cell wall] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A09p015020.1_BraROA R-BRA-8879029 DREB1G [nucleoplasm] R-BRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8879007 Response to cold temperature none Brassica rapa A09p015020.1_BraROA R-BRA-8879071 CBF1 homolog [nucleoplasm] R-BRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8879007 Response to cold temperature none Brassica rapa A09p015020.1_BraROA R-BRA-8879085 A09p015020.1_BraROA [nucleoplasm] R-BRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8879007 Response to cold temperature none Brassica rapa A09p015060.1_BraROA R-BRA-9826696-4 A09p015060.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A09p015120.1_BraROA R-BRA-5632261-2 A09p015120.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A09p015210.1_BraROA R-BRA-9675851 A09p015210.1_BraROA [nucleoplasm] R-BRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675815 Leading strand synthesis none Brassica rapa A09p015230.1_BraROA R-BRA-1130394-2 A09p015230.1_BraROA [cytosol] R-BRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119452 Galactose degradation II none Brassica rapa A09p015290.1_BraROA R-BRA-1124905 A09p015290.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A09p015590.1_BraROA R-BRA-1122593 A09p015590.1_BraROA [cytosol] R-BRA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119436 Peptidoglycan biosynthesis I none Brassica rapa A09p015590.1_BraROA R-BRA-1122593 A09p015590.1_BraROA [cytosol] R-BRA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119523 Tetrahydrofolate biosynthesis II none Brassica rapa A09p015590.1_BraROA R-BRA-1122593 A09p015590.1_BraROA [cytosol] R-BRA-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119617 Folate polyglutamylation I none Brassica rapa A09p015660.1_BraROA R-BRA-1129896 A09p015660.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A09p015800.1_BraROA R-BRA-1129922 A09p015800.1_BraROA [plastid stroma] R-BRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119464 Methylerythritol phosphate pathway none Brassica rapa A09p015970.1_BraROA R-BRA-5654827 A09p015970.1_BraROA [nucleoplasm] R-BRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5654828 Strigolactone signaling none Brassica rapa A09p016950.1_BraROA R-BRA-9607105 A09p016950.1_BraROA [mitochondrion] R-BRA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9607185 Generation of superoxide radicals none Brassica rapa A09p017030.1_BraROA R-BRA-1129922-2 A09p017030.1_BraROA [plastid stroma] R-BRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119464 Methylerythritol phosphate pathway none Brassica rapa A09p017580.1_BraROA R-BRA-5138500 A09p017580.1_BraROA [plastid stroma] R-BRA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119263 Arginine biosynthesis none Brassica rapa A09p017580.1_BraROA R-BRA-1129397 A09p017580.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A09p017580.1_BraROA R-BRA-1129397 A09p017580.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A09p017580.1_BraROA R-BRA-1129397 A09p017580.1_BraROA [cytosol] R-BRA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119295 Homoserine biosynthesis none Brassica rapa A09p017580.1_BraROA R-BRA-5138500 A09p017580.1_BraROA [plastid stroma] R-BRA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119539 Ornithine biosynthesis none Brassica rapa A09p017580.1_BraROA R-BRA-5138500 A09p017580.1_BraROA [plastid stroma] R-BRA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119622 Arginine biosynthesis II (acetyl cycle) none Brassica rapa A09p017740.1_BraROA R-BRA-5632261 A09p017740.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A09p017810.1_BraROA R-BRA-9826696-3 A09p017810.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A09p018400.1_BraROA R-BRA-1123745-2 A09p018400.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119260 Cardiolipin biosynthesis none Brassica rapa A09p018400.1_BraROA R-BRA-1123745-2 A09p018400.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119402 Phospholipid biosynthesis I none Brassica rapa A09p018430.1_BraROA R-BRA-1122827-3 A09p018430.1_BraROA [cytosol] R-BRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119334 Ethylene biosynthesis from methionine none Brassica rapa A09p020120.1_BraROA R-BRA-4752547 A09p020120.1_BraROA [plastid stroma] R-BRA-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119498 Phylloquinone biosynthesis none Brassica rapa A09p021560.1_BraROA R-BRA-1128263-3 A09p021560.1_BraROA [plastid stroma] R-BRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119509 Histidine biosynthesis I none Brassica rapa A09p022230.1_BraROA R-BRA-8854121-2 A09p022230.1_BraROA [cytosol] R-BRA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119556 Choline biosynthesis I none Brassica rapa A09p022270.1_BraROA R-BRA-9675365-3 A09p022270.1_BraROA [nucleoplasm] R-BRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675508 Root elongation none Brassica rapa A09p022440.1_BraROA R-BRA-9826680-2 A09p022440.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A09p023110.1_BraROA R-BRA-1124742 A09p023110.1_BraROA [cytosol] R-BRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119410 Ascorbate biosynthesis none Brassica rapa A09p023110.1_BraROA R-BRA-1124742 A09p023110.1_BraROA [cytosol] R-BRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119570 Cytosolic glycolysis none Brassica rapa A09p024210.1_BraROA R-BRA-5632268-3 A09p024210.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A09p024660.1_BraROA R-BRA-1125489-4 A09p024660.1_BraROA [Golgi membrane] R-BRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119428 GDP-D-rhamnose biosynthesis none Brassica rapa A09p024660.1_BraROA R-BRA-1127743-4 A09p024660.1_BraROA [cytosol] R-BRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119428 GDP-D-rhamnose biosynthesis none Brassica rapa A09p024660.1_BraROA R-BRA-1125489-4 A09p024660.1_BraROA [Golgi membrane] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A09p024660.1_BraROA R-BRA-1125489-4 A09p024660.1_BraROA [Golgi membrane] R-BRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brassica rapa A09p024660.1_BraROA R-BRA-1127743-4 A09p024660.1_BraROA [cytosol] R-BRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brassica rapa A09p024880.1_BraROA R-BRA-9675357 A09p024880.1_BraROA [nucleoplasm] R-BRA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030680 Crown root development none Brassica rapa A09p024980.1_BraROA R-BRA-1129818 A09p024980.1_BraROA [mitochondrial matrix] R-BRA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119365 Lysine degradation II none Brassica rapa A09p024980.1_BraROA R-BRA-1173242 A09p024980.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A09p025170.1_BraROA R-BRA-9626337 A09p025170.1_BraROA [Golgi-associated vesicle] R-BRA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9626305 Regulatory network of nutrient accumulation none Brassica rapa A09p025280.1_BraROA R-BRA-1128857 A09p025280.1_BraROA [cytosol] R-BRA-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119609 Phaseic acid biosynthesis none Brassica rapa A09p026040.1_BraROA R-BRA-4415060-3 A09p026040.1_BraROA [plasma membrane] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A09p026040.1_BraROA R-BRA-4415065-3 phospho-A09p026040.1_BraROA [plasma membrane] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A09p027260.1_BraROA R-BRA-1126998 A09p027260.1_BraROA [cytosol] R-BRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119615 Mevalonate pathway none Brassica rapa A09p027280.1_BraROA R-BRA-1127491 A09p027280.1_BraROA [chloroplast] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A09p027800.1_BraROA R-BRA-5679470-4 A09p027800.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A09p028000.1_BraROA R-BRA-5679402-5 A09p028000.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A09p028030.1_BraROA R-BRA-5679402-2 A09p028030.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A09p028170.1_BraROA R-BRA-1127353 A09p028170.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A09p029130.1_BraROA R-BRA-9675365 A09p029130.1_BraROA [nucleoplasm] R-BRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675508 Root elongation none Brassica rapa A09p030440.1_BraROA R-BRA-9025224 A09p030440.1_BraROA [endoplasmic reticulum lumen] R-BRA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119502 Allantoin degradation none Brassica rapa A09p030600.1_BraROA R-BRA-1127999 A09p030600.1_BraROA [mitochondrial inner membrane] R-BRA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119260 Cardiolipin biosynthesis none Brassica rapa A09p030970.1_BraROA R-BRA-9675365-4 A09p030970.1_BraROA [nucleoplasm] R-BRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675508 Root elongation none Brassica rapa A09p032260.1_BraROA R-BRA-1128328-2 A09p032260.1_BraROA [cytosol] R-BRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119615 Mevalonate pathway none Brassica rapa A09p032590.1_BraROA R-BRA-1126615-2 A09p032590.1_BraROA [cytosol] R-BRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119437 Glutathione redox reactions I none Brassica rapa A09p033100.1_BraROA R-BRA-6788007 A09p033100.1_BraROA [cytosol] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A09p033420.1_BraROA R-BRA-8933788-2 A09p033420.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A09p033630.1_BraROA R-BRA-1122936 A09p033630.1_BraROA [cytosol] R-BRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119452 Galactose degradation II none Brassica rapa A09p035210.1_BraROA R-BRA-8854108-3 A09p035210.1_BraROA [cytosol] R-BRA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119556 Choline biosynthesis I none Brassica rapa A09p036050.1_BraROA R-BRA-8933710 A09p036050.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A09p041570.1_BraROA R-BRA-8854108-4 A09p041570.1_BraROA [cytosol] R-BRA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119556 Choline biosynthesis I none Brassica rapa A09p041890.1_BraROA R-BRA-9916305-2 A09p041890.1_BraROA [nucleoplasm] R-BRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9916190 Root angle formation: elongation and curvature response none Brassica rapa A09p043710.1_BraROA R-BRA-8987554-2 A09p043710.1_BraROA [mitochondrial matrix] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A09p044060.1_BraROA R-BRA-1122783 A09p044060.1_BraROA [chloroplast stroma] R-BRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119402 Phospholipid biosynthesis I none Brassica rapa A09p044270.1_BraROA R-BRA-5149678-3 A09p044270.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A09p044450.1_BraROA R-BRA-5679402 A09p044450.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A09p044580.1_BraROA R-BRA-1123596 A09p044580.1_BraROA [plastid stroma] R-BRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119509 Histidine biosynthesis I none Brassica rapa A09p045420.1_BraROA R-BRA-1125926-2 A09p045420.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A09p045420.1_BraROA R-BRA-1125926-2 A09p045420.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A09p045420.1_BraROA R-BRA-1125926-2 A09p045420.1_BraROA [cytosol] R-BRA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119295 Homoserine biosynthesis none Brassica rapa A09p045420.1_BraROA R-BRA-5606498-2 A09p045420.1_BraROA [plastid stroma] R-BRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119419 Lysine biosynthesis VI none Brassica rapa A09p045440.1_BraROA R-BRA-1127414 A09p045440.1_BraROA [cytosol] R-BRA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119265 Tetrahydrofolate biosynthesis I none Brassica rapa A09p046510.1_BraROA R-BRA-1125489-2 A09p046510.1_BraROA [Golgi membrane] R-BRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119428 GDP-D-rhamnose biosynthesis none Brassica rapa A09p046510.1_BraROA R-BRA-1127743-2 A09p046510.1_BraROA [cytosol] R-BRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119428 GDP-D-rhamnose biosynthesis none Brassica rapa A09p046510.1_BraROA R-BRA-1125489-2 A09p046510.1_BraROA [Golgi membrane] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A09p046510.1_BraROA R-BRA-1125489-2 A09p046510.1_BraROA [Golgi membrane] R-BRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brassica rapa A09p046510.1_BraROA R-BRA-1127743-2 A09p046510.1_BraROA [cytosol] R-BRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brassica rapa A09p046820.1_BraROA R-BRA-9618186 A09p046820.1_BraROA [plant-type vacuole membrane] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A09p046980.1_BraROA R-BRA-5608154-2 A09p046980.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A09p049790.1_BraROA R-BRA-1127562 A09p049790.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A09p049790.1_BraROA R-BRA-1130466 A09p049790.1_BraROA [cytosol] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A09p050490.1_BraROA R-BRA-1128637 A09p050490.1_BraROA [chloroplast] R-BRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119494 Tryptophan biosynthesis none Brassica rapa A09p050540.1_BraROA R-BRA-5679470-6 A09p050540.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A09p050970.1_BraROA R-BRA-9826604-4 A09p050970.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A09p051600.1_BraROA R-BRA-9681886-6 A09p051600.1_BraROA [cytosol] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A09p051970.1_BraROA R-BRA-9640752-2 A09p051970.1_BraROA [nucleoplasm] R-BRA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640882 Assembly of pre-replication complex none Brassica rapa A09p051970.1_BraROA R-BRA-9640752-2 A09p051970.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A09p052940.1_BraROA R-BRA-1130327-3 A09p052940.1_BraROA [cytosol] R-BRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119586 Cyanate degradation none Brassica rapa A09p053290.1_BraROA R-BRA-1126549-4 A09p053290.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A09p053410.1_BraROA R-BRA-8987548-4 A09p053410.1_BraROA [peroxisomal matrix] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A09p053540.1_BraROA R-BRA-1128632 A09p053540.1_BraROA [cytosol] R-BRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119465 Sucrose biosynthesis none Brassica rapa A09p053540.1_BraROA R-BRA-1128632 A09p053540.1_BraROA [cytosol] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A09p053770.1_BraROA R-BRA-1125275 A09p053770.1_BraROA [cytosol] R-BRA-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119629 Thiamine biosynthesis none Brassica rapa A09p054060.1_BraROA R-BRA-9675481-5 A09p054060.1_BraROA [cytosol] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A09p054270.1_BraROA R-BRA-9826680-3 A09p054270.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A09p054370.1_BraROA R-BRA-1129934-2 A09p054370.1_BraROA [plastid stroma] R-BRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119430 Chorismate biosynthesis none Brassica rapa A09p054830.1_BraROA R-BRA-8987574-3 A09p054830.1_BraROA [mitochondrial matrix] R-BRA-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119311 Glycine biosynthesis I none Brassica rapa A09p054840.1_BraROA R-BRA-1128319-3 A09p054840.1_BraROA [cytosol] R-BRA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119341 Galactosylcyclitol biosynthesis none Brassica rapa A09p055260.1_BraROA R-BRA-1123819-2 A09p055260.1_BraROA [plastid stroma] R-BRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119464 Methylerythritol phosphate pathway none Brassica rapa A09p055320.1_BraROA R-BRA-9640671-3 A09p055320.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A09p055320.1_BraROA R-BRA-9640671-3 A09p055320.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A09p056490.1_BraROA R-BRA-2672431-2 A09p056490.1_BraROA [cytosol] R-BRA-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119322 Leucodelphinidin biosynthesis none Brassica rapa A09p056490.1_BraROA R-BRA-2672431-2 A09p056490.1_BraROA [cytosol] R-BRA-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Brassica rapa A09p056490.1_BraROA R-BRA-1124195-2 A09p056490.1_BraROA [cytosol] R-BRA-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119531 Flavonoid biosynthesis none Brassica rapa A09p056910.1_BraROA R-BRA-1127087 A09p056910.1_BraROA [cytosol] R-BRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119438 Secologanin and strictosidine biosynthesis none Brassica rapa A09p057300.1_BraROA R-BRA-1124190-2 A09p057300.1_BraROA [plastid stroma] R-BRA-1119412 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119412 Chlorophyll a biosynthesis I none Brassica rapa A09p057320.1_BraROA R-BRA-9916309-2 CPK3 [plasma membrane] R-BRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9916190 Root angle formation: elongation and curvature response none Brassica rapa A09p058280.1_BraROA R-BRA-1125374 A09p058280.1_BraROA [cytosol] R-BRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119586 Cyanate degradation none Brassica rapa A09p058530.1_BraROA R-BRA-5149646-4 A09p058530.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A09p058530.1_BraROA R-BRA-1126652-4 A09p058530.1_BraROA [cytosol] R-BRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119570 Cytosolic glycolysis none Brassica rapa A09p058570.1_BraROA R-BRA-1126955-3 A09p058570.1_BraROA [plastid] R-BRA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119407 Ureide biosynthesis none Brassica rapa A09p058700.1_BraROA R-BRA-1128678-2 A09p058700.1_BraROA [cytosol] R-BRA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119292 Cytokinins 7-N-glucoside biosynthesis none Brassica rapa A09p058700.1_BraROA R-BRA-1128678-2 A09p058700.1_BraROA [cytosol] R-BRA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119375 Cytokinins 9-N-glucoside biosynthesis none Brassica rapa A09p058700.1_BraROA R-BRA-1128678-2 A09p058700.1_BraROA [cytosol] R-BRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119473 Cytokinins-O-glucoside biosynthesis none Brassica rapa A09p058880.1_BraROA R-BRA-1130235-4 A09p058880.1_BraROA [cytosol] R-BRA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119261 Salicylate biosynthesis none Brassica rapa A09p058880.1_BraROA R-BRA-1130235-4 A09p058880.1_BraROA [cytosol] R-BRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119418 Suberin biosynthesis none Brassica rapa A09p058880.1_BraROA R-BRA-1130235-4 A09p058880.1_BraROA [cytosol] R-BRA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119582 Phenylpropanoid biosynthesis, initial reactions none Brassica rapa A09p059040.1_BraROA R-BRA-9618056-5 A09p059040.1_BraROA [plasma membrane] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A09p059670.1_BraROA R-BRA-1127082 A09p059670.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A09p059970.1_BraROA R-BRA-1126436-2 A09p059970.1_BraROA [cytosol] R-BRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119615 Mevalonate pathway none Brassica rapa A09p059980.1_BraROA R-BRA-1127089-6 A09p059980.1_BraROA [cytosol] R-BRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119465 Sucrose biosynthesis none Brassica rapa A09p060280.1_BraROA R-BRA-1129781 A09p060280.1_BraROA [chloroplast] R-BRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119494 Tryptophan biosynthesis none Brassica rapa A09p060300.1_BraROA R-BRA-1127299-2 A09p060300.1_BraROA [cytosol] R-BRA-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119298 Glutathione redox reactions II none Brassica rapa A09p060300.1_BraROA R-BRA-1127299-2 A09p060300.1_BraROA [cytosol] R-BRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119437 Glutathione redox reactions I none Brassica rapa A09p060760.1_BraROA R-BRA-1130032-2 A09p060760.1_BraROA [mitochondrial inner membrane] R-BRA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119260 Cardiolipin biosynthesis none Brassica rapa A09p061000.1_BraROA R-BRA-1125877 A09p061000.1_BraROA [cytosol] R-BRA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119456 Brassinosteroid biosynthesis II none Brassica rapa A09p061120.1_BraROA R-BRA-5149632 A09p061120.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A09p061350.1_BraROA R-BRA-1127913-5 A09p061350.1_BraROA [cytosol] R-BRA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119495 Citrulline biosynthesis none Brassica rapa A09p061350.1_BraROA R-BRA-1127913-5 A09p061350.1_BraROA [cytosol] R-BRA-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119631 Proline biosynthesis I none Brassica rapa A09p061460.1_BraROA R-BRA-1123470-3 A09p061460.1_BraROA [cytosol] R-BRA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119292 Cytokinins 7-N-glucoside biosynthesis none Brassica rapa A09p061460.1_BraROA R-BRA-1123470-3 A09p061460.1_BraROA [cytosol] R-BRA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119375 Cytokinins 9-N-glucoside biosynthesis none Brassica rapa A09p061460.1_BraROA R-BRA-1123470-3 A09p061460.1_BraROA [cytosol] R-BRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119473 Cytokinins-O-glucoside biosynthesis none Brassica rapa A09p061590.1_BraROA R-BRA-5149683-2 A09p061590.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A09p063200.1_BraROA R-BRA-1129311-2 A09p063200.1_BraROA [cytosol] R-BRA-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Brassica rapa A09p063450.1_BraROA R-BRA-2885386 A09p063450.1_BraROA [cytosol] R-BRA-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119417 Stachyose biosynthesis none Brassica rapa A09p064220.1_BraROA R-BRA-5632241-3 A09p064220.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A09p064290.1_BraROA R-BRA-1126157 A09p064290.1_BraROA [cytosol] R-BRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119460 Isoleucine biosynthesis from threonine none Brassica rapa A09p064290.1_BraROA R-BRA-1126157 A09p064290.1_BraROA [cytosol] R-BRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119600 Valine biosynthesis none Brassica rapa A09p064620.1_BraROA R-BRA-5632110 A09p064620.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A09p064620.1_BraROA R-BRA-5632110 A09p064620.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A09p064980.1_BraROA R-BRA-1125989-2 A09p064980.1_BraROA [cytosol] R-BRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119438 Secologanin and strictosidine biosynthesis none Brassica rapa A09p065270.1_BraROA R-BRA-9675391-5 A09p065270.1_BraROA [nucleoplasm] R-BRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675508 Root elongation none Brassica rapa A09p065790.1_BraROA R-BRA-8933728-4 A09p065790.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A09p066240.1_BraROA R-BRA-1130247-2 A09p066240.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A09p066400.1_BraROA R-BRA-1126602-2 A09p066400.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A09p066400.1_BraROA R-BRA-1126602-2 A09p066400.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A09p066400.1_BraROA R-BRA-5606494-2 A09p066400.1_BraROA [plastid stroma] R-BRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119419 Lysine biosynthesis VI none Brassica rapa A09p066900.1_BraROA R-BRA-1129547-7 A09p066900.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A09p066900.1_BraROA R-BRA-1129547-7 A09p066900.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A09p066900.1_BraROA R-BRA-1129547-7 A09p066900.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A09p066910.1_BraROA R-BRA-1129892-2 A09p066910.1_BraROA [cytosol] R-BRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119334 Ethylene biosynthesis from methionine none Brassica rapa A09p066910.1_BraROA R-BRA-1129892-2 A09p066910.1_BraROA [cytosol] R-BRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119624 Methionine salvage pathway none Brassica rapa A09p066920.1_BraROA R-BRA-1129411 A09p066920.1_BraROA [cytosol] R-BRA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119496 Pantothenate biosynthesis I none Brassica rapa A09p066920.1_BraROA R-BRA-1129411 A09p066920.1_BraROA [cytosol] R-BRA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119544 Pantothenate biosynthesis II none Brassica rapa A09p068170.1_BraROA R-BRA-5608164 A09p068170.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A09p068170.1_BraROA R-BRA-5608164 A09p068170.1_BraROA [nucleoplasm] R-BRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030557 Lateral root initiation none Brassica rapa A09p068170.1_BraROA R-BRA-5608164 A09p068170.1_BraROA [nucleoplasm] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A09p068170.1_BraROA R-BRA-9658967 A09p068170.1_BraROA [cytosol] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A09p068210.1_BraROA R-BRA-5679398 A09p068210.1_BraROA [cytosol] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A09p068470.1_BraROA R-BRA-9924379-2 HSFA2D [nucleoplasm] R-BRA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924451 Shoot (tiller) formation and regulation of tiller angle none Brassica rapa A09p068580.1_BraROA R-BRA-4827040 A09p068580.1_BraROA [plastid stroma] R-BRA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-4827054 Tetrapyrrole biosynthesis I none Brassica rapa A09p069050.1_BraROA R-BRA-3240749 A09p069050.1_BraROA [cytosol] R-BRA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Brassica rapa A09p069050.1_BraROA R-BRA-9681918 A09p069050.1_BraROA [cytosol] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A09p069110.1_BraROA R-BRA-1129485 A09p069110.1_BraROA [cytosol] R-BRA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119341 Galactosylcyclitol biosynthesis none Brassica rapa A09p069340.1_BraROA R-BRA-1128173-2 A09p069340.1_BraROA [cytosol] R-BRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119437 Glutathione redox reactions I none Brassica rapa A09p069410.1_BraROA R-BRA-9609343 A09p069410.1_BraROA [cytosol] R-BRA-9609352 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9609352 Lycopene catabolism none Brassica rapa A09p069420.1_BraROA R-BRA-9609343-2 A09p069420.1_BraROA [cytosol] R-BRA-9609352 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9609352 Lycopene catabolism none Brassica rapa A09p069440.1_BraROA R-BRA-1129547-8 A09p069440.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A09p069440.1_BraROA R-BRA-1129547-8 A09p069440.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A09p069440.1_BraROA R-BRA-1129547-8 A09p069440.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A09p070580.1_BraROA R-BRA-8933816-2 A09p070580.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A09p071080.1_BraROA R-BRA-9640777-2 A09p071080.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A09p071080.1_BraROA R-BRA-9640777-2 A09p071080.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A09p071120.1_BraROA R-BRA-1128950 A09p071120.1_BraROA [cytosol] R-BRA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119379 Flavin biosynthesis none Brassica rapa A09p071310.1_BraROA R-BRA-1129964-2 A09p071310.1_BraROA [cytosol] R-BRA-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119378 Myo-inositol biosynthesis none Brassica rapa A09p071310.1_BraROA R-BRA-1129964-2 A09p071310.1_BraROA [cytosol] R-BRA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119434 Phytic acid biosynthesis (lipid-independent) none Brassica rapa A09p072110.1_BraROA R-BRA-1128877 A09p072110.1_BraROA [plastid stroma] R-BRA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119424 Plastid glycolysis none Brassica rapa A09p072110.1_BraROA R-BRA-1128877 A09p072110.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A09p072460.1_BraROA R-BRA-1129547-13 A09p072460.1_BraROA [cytosol] R-BRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119389 Phenylalanine biosynthesis I none Brassica rapa A09p072460.1_BraROA R-BRA-1129547-13 A09p072460.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A09p072460.1_BraROA R-BRA-1129547-13 A09p072460.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A09p072610.1_BraROA R-BRA-1122881 A09p072610.1_BraROA [cytosol] R-BRA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Brassica rapa A09p072610.1_BraROA R-BRA-1122881 A09p072610.1_BraROA [cytosol] R-BRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119438 Secologanin and strictosidine biosynthesis none Brassica rapa A09p072610.1_BraROA R-BRA-1122881 A09p072610.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A09p072800.1_BraROA R-BRA-1123860-5 A09p072800.1_BraROA [cytosol] R-BRA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119292 Cytokinins 7-N-glucoside biosynthesis none Brassica rapa A09p072800.1_BraROA R-BRA-1123860-5 A09p072800.1_BraROA [cytosol] R-BRA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119375 Cytokinins 9-N-glucoside biosynthesis none Brassica rapa A09p072800.1_BraROA R-BRA-1123860-5 A09p072800.1_BraROA [cytosol] R-BRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119473 Cytokinins-O-glucoside biosynthesis none Brassica rapa A09p073040.1_BraROA R-BRA-5632334-8 A09p073040.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A09p073040.1_BraROA R-BRA-5632197-8 phospho-A09p073040.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A09p073040.1_BraROA R-BRA-5632183-8 phospho-A09p073040.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A09p073040.1_BraROA R-BRA-5632334-8 A09p073040.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A09p073100.1_BraROA R-BRA-9607102 A09p073100.1_BraROA [mitochondrion] R-BRA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9607185 Generation of superoxide radicals none Brassica rapa A09p073560.1_BraROA R-BRA-1127173-2 A09p073560.1_BraROA [cytosol] R-BRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119540 Leucine biosynthesis none Brassica rapa A09p073740.1_BraROA R-BRA-9640664-3 A09p073740.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A09p073860.1_BraROA R-BRA-5632264 A09p073860.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A09p074080.1_BraROA R-BRA-1123433-3 A09p074080.1_BraROA [cytosol] R-BRA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119332 Jasmonic acid biosynthesis none Brassica rapa A09p074080.1_BraROA R-BRA-1123433-3 A09p074080.1_BraROA [cytosol] R-BRA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119618 13-LOX and 13-HPL pathway none Brassica rapa A09p074910.1_BraROA R-BRA-1128200 A09p074910.1_BraROA [cytosol] R-BRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119316 Phenylpropanoid biosynthesis none Brassica rapa A09p075450.1_BraROA R-BRA-1123250-2 A09p075450.1_BraROA [cytosol] R-BRA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119265 Tetrahydrofolate biosynthesis I none Brassica rapa A09p075450.1_BraROA R-BRA-1123250-2 A09p075450.1_BraROA [cytosol] R-BRA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119523 Tetrahydrofolate biosynthesis II none Brassica rapa A09p075470.1_BraROA R-BRA-9025372 A09p075470.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119402 Phospholipid biosynthesis I none Brassica rapa A09p075880.1_BraROA R-BRA-5679402-7 A09p075880.1_BraROA [nucleoplasm] R-BRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5679411 Gibberellin signaling none Brassica rapa A09p076690.1_BraROA R-BRA-6787262-7 A09p076690.1_BraROA [nucleoplasm] R-BRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6787011 Jasmonic acid signaling none Brassica rapa A09p076850.1_BraROA R-BRA-1122785-5 A09p076850.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A09p076850.1_BraROA R-BRA-1126726-5 A09p076850.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A09p076850.1_BraROA R-BRA-1122785-5 A09p076850.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A09p076850.1_BraROA R-BRA-1126726-5 A09p076850.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A09p076850.1_BraROA R-BRA-1122785-5 A09p076850.1_BraROA [cytosol] R-BRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119570 Cytosolic glycolysis none Brassica rapa A09p077150.1_BraROA R-BRA-9611469-2 phospho-phosphorylated-SDS2 [plasma membrane] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A09p077150.1_BraROA R-BRA-9611553-2 ubiquitinated-SDS2 [cytosol] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A09p077630.1_BraROA R-BRA-9639892-2 A09p077630.1_BraROA [cell wall] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A09p077920.1_BraROA R-BRA-1126888 A09p077920.1_BraROA [cytosol] R-BRA-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119360 Fructan biosynthesis none Brassica rapa A09p078040.1_BraROA R-BRA-1122827 A09p078040.1_BraROA [cytosol] R-BRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119334 Ethylene biosynthesis from methionine none Brassica rapa A09p078180.1_BraROA R-BRA-8987488-2 A09p078180.1_BraROA [mitochondrial matrix] R-BRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119312 Photorespiration none Brassica rapa A09p078330.1_BraROA R-BRA-9918175-3 A09p078330.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A09p079010.1_BraROA R-BRA-5632120-2 A09p079010.1_BraROA [nucleoplasm] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A09p079430.1_BraROA R-BRA-8933842-2 A09p079430.1_BraROA [cytosol] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A09p079430.1_BraROA R-BRA-8933843-2 A09p079430.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A09p079590.1_BraROA R-BRA-9607149 A09p079590.1_BraROA [plasma membrane] R-BRA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9607185 Generation of superoxide radicals none Brassica rapa A09p079590.1_BraROA R-BRA-9607094 phospho-A09p079590.1_BraROA [plasma membrane] R-BRA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9607185 Generation of superoxide radicals none Brassica rapa A09p079590.1_BraROA R-BRA-9607132 RBOHB [plasma membrane] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A09p079590.1_BraROA R-BRA-9611529 phospho-phosphorylated-RBOHB [plasma membrane] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A09p079740.1_BraROA R-BRA-9675878 A09p079740.1_BraROA [nucleoplasm] R-BRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675782 Maturation none Brassica rapa A09p079940.1_BraROA R-BRA-9826669-2 OsYABBY6 [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A09p079970.1_BraROA R-BRA-5632111 A09p079970.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A09p079970.1_BraROA R-BRA-5632216 phospho-A09p079970.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A09p080060.1_BraROA R-BRA-6787863 A09p080060.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A09p080080.1_BraROA R-BRA-9675845 A09p080080.1_BraROA [nucleoplasm] R-BRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675782 Maturation none Brassica rapa A09p080350.1_BraROA R-BRA-9611528 RLCK176 [cytosol] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A09p080350.1_BraROA R-BRA-9611477 phospho-phosphorylated-RLCK176 [cytosol] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A09p080520.1_BraROA R-BRA-4415078-3 A09p080520.1_BraROA [cytosol] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A09p080690.1_BraROA R-BRA-5654797-3 A09p080690.1_BraROA [nucleoplasm] R-BRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5654828 Strigolactone signaling none Brassica rapa A09p081000.1_BraROA R-BRA-1128974 A09p081000.1_BraROA [cytosol] R-BRA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119287 Vitamin E biosynthesis none Brassica rapa A09p081000.1_BraROA R-BRA-1128974 A09p081000.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A09p081310.1_BraROA R-BRA-9675297-3 A09p081310.1_BraROA [mitochondrion] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A09p081400.1_BraROA R-BRA-9927723 A09p081400.1_BraROA [nucleoplasm] R-BRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934036 Long day regulated expression of florigens none Brassica rapa A09p081600.1_BraROA R-BRA-1125187-4 A09p081600.1_BraROA [cytosol] R-BRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119276 Choline biosynthesis III none Brassica rapa A09p081950.1_BraROA R-BRA-1128385-5 A09p081950.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A09p082180.1_BraROA R-BRA-1122892-8 A09p082180.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A09p082180.1_BraROA R-BRA-1122892-8 A09p082180.1_BraROA [nucleoplasm] R-BRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030557 Lateral root initiation none Brassica rapa A09p082180.1_BraROA R-BRA-1122892-8 A09p082180.1_BraROA [nucleoplasm] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A10g503730.1_BraROA R-BRA-1128974-2 A10g503730.1_BraROA [cytosol] R-BRA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119287 Vitamin E biosynthesis none Brassica rapa A10g503730.1_BraROA R-BRA-1128974-2 A10g503730.1_BraROA [cytosol] R-BRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119506 tyrosine degradation I none Brassica rapa A10g504000.1_BraROA R-BRA-9640689 A10g504000.1_BraROA [nucleoplasm] R-BRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675782 Maturation none Brassica rapa A10g504000.1_BraROA R-BRA-9640689 A10g504000.1_BraROA [nucleoplasm] R-BRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675815 Leading strand synthesis none Brassica rapa A10g504000.1_BraROA R-BRA-9640689 A10g504000.1_BraROA [nucleoplasm] R-BRA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675885 Lagging strand synthesis none Brassica rapa A10g505860.1_BraROA R-BRA-1123860-2 A10g505860.1_BraROA [cytosol] R-BRA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119292 Cytokinins 7-N-glucoside biosynthesis none Brassica rapa A10g505860.1_BraROA R-BRA-1123860-2 A10g505860.1_BraROA [cytosol] R-BRA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119375 Cytokinins 9-N-glucoside biosynthesis none Brassica rapa A10g505860.1_BraROA R-BRA-1123860-2 A10g505860.1_BraROA [cytosol] R-BRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119473 Cytokinins-O-glucoside biosynthesis none Brassica rapa A10g506290.1_BraROA R-BRA-1124861-3 A10g506290.1_BraROA [plastid stroma] R-BRA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119449 Carotenoid biosynthesis none Brassica rapa A10g506650.1_BraROA R-BRA-3240748-3 A10g506650.1_BraROA [cytosol] R-BRA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Brassica rapa A10g506760.1_BraROA R-BRA-5632192-2 A10g506760.1_BraROA [cytosol] R-BRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5632095 Brassinosteroid signaling none Brassica rapa A10g506830.1_BraROA R-BRA-1129964-4 A10g506830.1_BraROA [cytosol] R-BRA-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119378 Myo-inositol biosynthesis none Brassica rapa A10g506830.1_BraROA R-BRA-1129964-4 A10g506830.1_BraROA [cytosol] R-BRA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119434 Phytic acid biosynthesis (lipid-independent) none Brassica rapa A10g507150.1_BraROA R-BRA-5655007-3 A10g507150.1_BraROA [Golgi lumen] R-BRA-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5655010 Xylogalacturonan biosynthesis none Brassica rapa A10p000300.1_BraROA R-BRA-9930308-2 SNAC2 (OsNAC6) [nucleoplasm] R-BRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9766881 TF network involved in salinity response none Brassica rapa A10p000510.1_BraROA R-BRA-1129892 A10p000510.1_BraROA [cytosol] R-BRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119334 Ethylene biosynthesis from methionine none Brassica rapa A10p000510.1_BraROA R-BRA-1129892 A10p000510.1_BraROA [cytosol] R-BRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119624 Methionine salvage pathway none Brassica rapa A10p000910.1_BraROA R-BRA-8933759-2 A10p000910.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A10p001540.1_BraROA R-BRA-1123894 A10p001540.1_BraROA [plasma membrane] R-BRA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119314 Cellulose biosynthesis none Brassica rapa A10p002060.1_BraROA R-BRA-9918267 ISA2 [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A10p002680.1_BraROA R-BRA-9928771 A10p002680.1_BraROA [nucleoplasm] R-BRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928831 Severe drought none Brassica rapa A10p002920.1_BraROA R-BRA-1122892 A10p002920.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A10p002920.1_BraROA R-BRA-1122892 A10p002920.1_BraROA [nucleoplasm] R-BRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030557 Lateral root initiation none Brassica rapa A10p002920.1_BraROA R-BRA-1122892 A10p002920.1_BraROA [nucleoplasm] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A10p002970.1_BraROA R-BRA-5225766-2 A10p002970.1_BraROA [nucleoplasm] R-BRA-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5225756 Ethylene mediated signaling none Brassica rapa A10p003110.1_BraROA R-BRA-8933738 A10p003110.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A10p003270.1_BraROA R-BRA-1128385 A10p003270.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A10p003310.1_BraROA R-BRA-1250418-5 A10p003310.1_BraROA [cytosol] R-BRA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119374 Abscisic acid biosynthesis none Brassica rapa A10p003310.1_BraROA R-BRA-1129637-5 A10p003310.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A10p003750.1_BraROA R-BRA-1124348 A10p003750.1_BraROA [cytosol] R-BRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119465 Sucrose biosynthesis none Brassica rapa A10p003940.1_BraROA R-BRA-1122827-2 A10p003940.1_BraROA [cytosol] R-BRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119334 Ethylene biosynthesis from methionine none Brassica rapa A10p004090.1_BraROA R-BRA-1125766 A10p004090.1_BraROA [cytosol] R-BRA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119557 GA12 biosynthesis none Brassica rapa A10p005140.1_BraROA R-BRA-9675297 A10p005140.1_BraROA [mitochondrion] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A10p006600.1_BraROA R-BRA-5654797-4 A10p006600.1_BraROA [nucleoplasm] R-BRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5654828 Strigolactone signaling none Brassica rapa A10p006690.1_BraROA R-BRA-9640886 A10p006690.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A10p006840.1_BraROA R-BRA-4415078-7 A10p006840.1_BraROA [cytosol] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A10p007030.1_BraROA R-BRA-9611528-2 RLCK176 [cytosol] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A10p007030.1_BraROA R-BRA-9611477-2 phospho-phosphorylated-RLCK176 [cytosol] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A10p007170.1_BraROA R-BRA-1123465 A10p007170.1_BraROA [plastid stroma] R-BRA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119424 Plastid glycolysis none Brassica rapa A10p007170.1_BraROA R-BRA-5633368 A10p007170.1_BraROA [cytosol] R-BRA-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119601 Trehalose degradation II none Brassica rapa A10p007560.1_BraROA R-BRA-9916252 OsEGT1 [nucleoplasm] R-BRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9916190 Root angle formation: elongation and curvature response none Brassica rapa A10p007820.1_BraROA R-BRA-8986682-5 A10p007820.1_BraROA [extracellular region] R-BRA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8986768 Anther and pollen development none Brassica rapa A10p010210.1_BraROA R-BRA-9640753-2 A10p010210.1_BraROA [nucleoplasm] R-BRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9645850 Activation of pre-replication complex none Brassica rapa A10p010210.1_BraROA R-BRA-9640753-2 A10p010210.1_BraROA [nucleoplasm] R-BRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9675824 DNA replication Initiation none Brassica rapa A10p011240.1_BraROA R-BRA-2685721 A10p011240.1_BraROA [cytosol] R-BRA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119580 IAA biosynthesis II none Brassica rapa A10p011250.1_BraROA R-BRA-4827046 A10p011250.1_BraROA [plastid stroma] R-BRA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-4827054 Tetrapyrrole biosynthesis I none Brassica rapa A10p012920.1_BraROA R-BRA-1127151 A10p012920.1_BraROA [cytosol] R-BRA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119384 NAD biosynthesis I (from aspartate) none Brassica rapa A10p013340.1_BraROA R-BRA-9608930-3 A10p013340.1_BraROA [nucleoplasm] R-BRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934036 Long day regulated expression of florigens none Brassica rapa A10p013780.1_BraROA R-BRA-1125569 A10p013780.1_BraROA [cytosol] R-BRA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119516 Trehalose biosynthesis I none Brassica rapa A10p014300.1_BraROA R-BRA-1124757 A10p014300.1_BraROA [cytosol] R-BRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119465 Sucrose biosynthesis none Brassica rapa A10p014300.1_BraROA R-BRA-1124757 A10p014300.1_BraROA [cytosol] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A10p014490.1_BraROA R-BRA-8879029-2 DREB1G [nucleoplasm] R-BRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8879007 Response to cold temperature none Brassica rapa A10p014490.1_BraROA R-BRA-8879071-2 CBF1 homolog [nucleoplasm] R-BRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8879007 Response to cold temperature none Brassica rapa A10p014490.1_BraROA R-BRA-8879085-2 A10p014490.1_BraROA [nucleoplasm] R-BRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8879007 Response to cold temperature none Brassica rapa A10p014500.1_BraROA R-BRA-9826696-2 A10p014500.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A10p015820.1_BraROA R-BRA-1123059-2 A10p015820.1_BraROA [cytosol] R-BRA-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119317 Spermine biosynthesis none Brassica rapa A10p015820.1_BraROA R-BRA-1123059-2 A10p015820.1_BraROA [cytosol] R-BRA-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119343 Spermidine biosynthesis none Brassica rapa A10p016440.1_BraROA R-BRA-9025699-2 A10p016440.1_BraROA [plasma membrane] R-BRA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8858053 Polar auxin transport none Brassica rapa A10p016440.1_BraROA R-BRA-9025699-2 A10p016440.1_BraROA [plasma membrane] R-BRA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9025727 Iron uptake and transport in root vascular system none Brassica rapa A10p016730.1_BraROA R-BRA-9611469-3 phospho-phosphorylated-SDS2 [plasma membrane] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A10p016730.1_BraROA R-BRA-9611553-3 ubiquitinated-SDS2 [cytosol] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A10p017000.1_BraROA R-BRA-2685732 A10p017000.1_BraROA [cytosol] R-BRA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119580 IAA biosynthesis II none Brassica rapa A10p017870.1_BraROA R-BRA-9918175-5 A10p017870.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A10p017880.1_BraROA R-BRA-1129867-2 A10p017880.1_BraROA [chloroplast] R-BRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119494 Tryptophan biosynthesis none Brassica rapa A10p018020.1_BraROA R-BRA-9025294-2 A10p018020.1_BraROA [cytosol] R-BRA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119267 Phenylalanine degradation III none Brassica rapa A10p018020.1_BraROA R-BRA-1124944-3 A10p018020.1_BraROA [plastid stroma] R-BRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119460 Isoleucine biosynthesis from threonine none Brassica rapa A10p018020.1_BraROA R-BRA-1127774-3 A10p018020.1_BraROA [cytosol] R-BRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119460 Isoleucine biosynthesis from threonine none Brassica rapa A10p018020.1_BraROA R-BRA-1124944-3 A10p018020.1_BraROA [plastid stroma] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A10p018020.1_BraROA R-BRA-1127774-3 A10p018020.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A10p018020.1_BraROA R-BRA-1124944-3 A10p018020.1_BraROA [plastid stroma] R-BRA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119502 Allantoin degradation none Brassica rapa A10p018020.1_BraROA R-BRA-1124944-3 A10p018020.1_BraROA [plastid stroma] R-BRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119600 Valine biosynthesis none Brassica rapa A10p018020.1_BraROA R-BRA-1127774-3 A10p018020.1_BraROA [cytosol] R-BRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119600 Valine biosynthesis none Brassica rapa A10p018110.1_BraROA R-BRA-1128606-3 A10p018110.1_BraROA [mitochondrial matrix] R-BRA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119365 Lysine degradation II none Brassica rapa A10p018110.1_BraROA R-BRA-1173244-3 A10p018110.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A10p018330.1_BraROA R-BRA-9675426-2 A10p018330.1_BraROA [nucleoplasm] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A10p019190.1_BraROA R-BRA-1130281 A10p019190.1_BraROA [cytosol] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A10p020060.1_BraROA R-BRA-1128798-2 A10p020060.1_BraROA [cytosol] R-BRA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119331 Cysteine biosynthesis I none Brassica rapa A10p020430.1_BraROA R-BRA-8858085-2 A10p020430.1_BraROA [plasma membrane] R-BRA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8858053 Polar auxin transport none Brassica rapa A10p020430.1_BraROA R-BRA-8858085-2 A10p020430.1_BraROA [plasma membrane] R-BRA-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924494 Gravity sensing and statolith sedimentation none Brassica rapa A10p020430.1_BraROA R-BRA-9928298-2 PIN2 [endosome] R-BRA-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924494 Gravity sensing and statolith sedimentation none Brassica rapa A10p020570.1_BraROA R-BRA-1126488 A10p020570.1_BraROA [mitochondrial inner membrane] R-BRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119402 Phospholipid biosynthesis I none Brassica rapa A10p020930.1_BraROA R-BRA-1124048-2 A10p020930.1_BraROA [cytosol] R-BRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119610 Biotin biosynthesis II none Brassica rapa A10p021050.1_BraROA R-BRA-1123477 A10p021050.1_BraROA [cytosol] R-BRA-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119451 Xylose degradation none Brassica rapa A10p022510.1_BraROA R-BRA-4415078-6 A10p022510.1_BraROA [cytosol] R-BRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-3899351 Abscisic acid (ABA) mediated signaling none Brassica rapa A10p022800.1_BraROA R-BRA-9684723-2 A10p022800.1_BraROA [cytosol] R-BRA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9609102 Flower development none Brassica rapa A10p023250.1_BraROA R-BRA-9826691-2 A10p023250.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A10p023950.1_BraROA R-BRA-1125910-2 A10p023950.1_BraROA [plastid stroma] R-BRA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119367 Polyisoprenoid biosynthesis none Brassica rapa A10p023960.1_BraROA R-BRA-1125910 A10p023960.1_BraROA [plastid stroma] R-BRA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119367 Polyisoprenoid biosynthesis none Brassica rapa A10p024050.1_BraROA R-BRA-1124778 A10p024050.1_BraROA [plastid stroma] R-BRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119464 Methylerythritol phosphate pathway none Brassica rapa A10p024120.1_BraROA R-BRA-1125494 A10p024120.1_BraROA [endoplasmic reticulum membrane] R-BRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119402 Phospholipid biosynthesis I none Brassica rapa A10p024150.1_BraROA R-BRA-9618056 A10p024150.1_BraROA [plasma membrane] R-BRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9618218 Arsenic uptake and detoxification none Brassica rapa A10p024400.1_BraROA R-BRA-9826654 A10p024400.1_BraROA [nucleoplasm] R-BRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brassica rapa A10p024970.1_BraROA R-BRA-9640739-2 A10p024970.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A10p025150.1_BraROA R-BRA-1126604 A10p025150.1_BraROA [cytosol] R-BRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119438 Secologanin and strictosidine biosynthesis none Brassica rapa A10p025320.1_BraROA R-BRA-9927865 A10p025320.1_BraROA [nucleoplasm] R-BRA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934257 Transition from vegetative to reproductive shoot apical meristem none Brassica rapa A10p025450.1_BraROA R-BRA-1126387 A10p025450.1_BraROA [cytosol] R-BRA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119295 Homoserine biosynthesis none Brassica rapa A10p025520.1_BraROA R-BRA-1250418-3 A10p025520.1_BraROA [cytosol] R-BRA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119374 Abscisic acid biosynthesis none Brassica rapa A10p025520.1_BraROA R-BRA-1129637-3 A10p025520.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A10p025660.1_BraROA R-BRA-6788201-2 A10p025660.1_BraROA [nucleoplasm] R-BRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-6788019 Salicylic acid signaling none Brassica rapa A10p025680.1_BraROA R-BRA-1129561 A10p025680.1_BraROA [cytosol] R-BRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119452 Galactose degradation II none Brassica rapa A10p025680.1_BraROA R-BRA-1129561 A10p025680.1_BraROA [cytosol] R-BRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119465 Sucrose biosynthesis none Brassica rapa A10p025730.1_BraROA R-BRA-5608125-4 A10p025730.1_BraROA [nucleoplasm] R-BRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5608118 Auxin signalling none Brassica rapa A10p026090.1_BraROA R-BRA-1127574-3 A10p026090.1_BraROA [cytosol] R-BRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119465 Sucrose biosynthesis none Brassica rapa A10p026590.1_BraROA R-BRA-1125734 A10p026590.1_BraROA [cytosol] R-BRA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119281 Aspartate biosynthesis I none Brassica rapa A10p026590.1_BraROA R-BRA-5632000 A10p026590.1_BraROA [plastid stroma] R-BRA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119553 Asparagine biosynthesis none Brassica rapa A10p026740.1_BraROA R-BRA-9611465-3 A10p026740.1_BraROA [nucleoplasm] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A10p026740.1_BraROA R-BRA-9611445-3 A10p026740.1_BraROA [nucleoplasm] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A10p026840.1_BraROA R-BRA-1122398 A10p026840.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A10p027080.1_BraROA R-BRA-9930255-2 MPK15 [nucleoplasm] R-BRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9766881 TF network involved in salinity response none Brassica rapa A10p027990.1_BraROA R-BRA-1126238 A10p027990.1_BraROA [chloroplast] R-BRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119494 Tryptophan biosynthesis none Brassica rapa A10p028020.1_BraROA R-BRA-1125151-2 A10p028020.1_BraROA [cytosol] R-BRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119400 Methionine biosynthesis II none Brassica rapa A10p028020.1_BraROA R-BRA-1125151-2 A10p028020.1_BraROA [cytosol] R-BRA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119501 S-adenosyl-L-methionine cycle none Brassica rapa A10p028120.1_BraROA R-BRA-9924413-3 WOX6 [nucleoplasm] R-BRA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9924451 Shoot (tiller) formation and regulation of tiller angle none Brassica rapa A10p029220.1_BraROA R-BRA-8858074 A10p029220.1_BraROA [plasma membrane] R-BRA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8858053 Polar auxin transport none Brassica rapa A10p029890.1_BraROA R-BRA-8934168-2 A10p029890.1_BraROA [nucleoplasm] R-BRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934036 Long day regulated expression of florigens none Brassica rapa A10p029890.1_BraROA R-BRA-8934168-2 A10p029890.1_BraROA [nucleoplasm] R-BRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934108 Short day regulated expression of florigens none Brassica rapa A10p029890.1_BraROA R-BRA-9920270-2 A10p029890.1_BraROA [nucleoplasm] R-BRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934108 Short day regulated expression of florigens none Brassica rapa A10p029890.1_BraROA R-BRA-8934168-2 A10p029890.1_BraROA [nucleoplasm] R-BRA-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928946 Drought escape (DE) via ABA-independent pathway none Brassica rapa A10p029900.1_BraROA R-BRA-8934168 A10p029900.1_BraROA [nucleoplasm] R-BRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934036 Long day regulated expression of florigens none Brassica rapa A10p029900.1_BraROA R-BRA-8934168 A10p029900.1_BraROA [nucleoplasm] R-BRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934108 Short day regulated expression of florigens none Brassica rapa A10p029900.1_BraROA R-BRA-9920270 A10p029900.1_BraROA [nucleoplasm] R-BRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8934108 Short day regulated expression of florigens none Brassica rapa A10p029900.1_BraROA R-BRA-8934168 A10p029900.1_BraROA [nucleoplasm] R-BRA-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928946 Drought escape (DE) via ABA-independent pathway none Brassica rapa A10p029990.1_BraROA R-BRA-2960790-2 A10p029990.1_BraROA [cytosol] R-BRA-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119386 UDP-N-acetylgalactosamine biosynthesis none Brassica rapa A10p029990.1_BraROA R-BRA-2960790-2 A10p029990.1_BraROA [cytosol] R-BRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9030654 Primary root development none Brassica rapa A10p030070.1_BraROA R-BRA-9681910-2 A10p030070.1_BraROA [Golgi membrane] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A10p030220.1_BraROA R-BRA-9681886 A10p030220.1_BraROA [cytosol] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A10p030560.1_BraROA R-BRA-8858063 A10p030560.1_BraROA [plasma membrane] R-BRA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8858053 Polar auxin transport none Brassica rapa A10p030700.1_BraROA R-BRA-5631958-2 A10p030700.1_BraROA [cytosol] R-BRA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119289 Arginine degradation none Brassica rapa A10p030700.1_BraROA R-BRA-1122345-2 A10p030700.1_BraROA [cytosol] R-BRA-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119318 Proline biosynthesis V (from arginine) none Brassica rapa A10p030700.1_BraROA R-BRA-1122345-2 A10p030700.1_BraROA [cytosol] R-BRA-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119631 Proline biosynthesis I none Brassica rapa A10p030740.1_BraROA R-BRA-1122347 A10p030740.1_BraROA [cytosol] R-BRA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119384 NAD biosynthesis I (from aspartate) none Brassica rapa A10p030950.1_BraROA R-BRA-3240748 A10p030950.1_BraROA [cytosol] R-BRA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Brassica rapa A10p031860.1_BraROA R-BRA-1126714 A10p031860.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A10p031860.1_BraROA R-BRA-1126714 A10p031860.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A10p031860.1_BraROA R-BRA-1126714 A10p031860.1_BraROA [cytosol] R-BRA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119295 Homoserine biosynthesis none Brassica rapa A10p031860.1_BraROA R-BRA-5606484 A10p031860.1_BraROA [plastid stroma] R-BRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119419 Lysine biosynthesis VI none Brassica rapa A10p032650.1_BraROA R-BRA-1127373 A10p032650.1_BraROA [cytosol] R-BRA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119297 Beta-alanine biosynthesis III none Brassica rapa A10p032680.1_BraROA R-BRA-9611465 A10p032680.1_BraROA [nucleoplasm] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A10p032680.1_BraROA R-BRA-9611445 A10p032680.1_BraROA [nucleoplasm] R-BRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brassica rapa A10p032920.1_BraROA R-BRA-1127738-2 A10p032920.1_BraROA [cytosol] R-BRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119273 Lysine biosynthesis I none Brassica rapa A10p032920.1_BraROA R-BRA-1127738-2 A10p032920.1_BraROA [cytosol] R-BRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119283 Lysine biosynthesis II none Brassica rapa A10p032920.1_BraROA R-BRA-5606514-2 A10p032920.1_BraROA [plastid stroma] R-BRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119419 Lysine biosynthesis VI none Brassica rapa A10p033390.1_BraROA R-BRA-1126875 A10p033390.1_BraROA [cytosol] R-BRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119486 IAA biosynthesis I none Brassica rapa A10p033440.1_BraROA R-BRA-8933766-2 A10p033440.1_BraROA [nucleoplasm] R-BRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-8933811 Circadian rhythm none Brassica rapa A10p034090.1_BraROA R-BRA-9640777-4 A10p034090.1_BraROA [nucleoplasm] R-BRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640760 G1 phase none Brassica rapa A10p034090.1_BraROA R-BRA-9640777-4 A10p034090.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A10p035450.1_BraROA R-BRA-1125237-3 A10p035450.1_BraROA [mitochondrial matrix] R-BRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119533 TCA cycle (plant) none Brassica rapa A10p035470.1_BraROA R-BRA-4827041-2 A10p035470.1_BraROA [plastid stroma] R-BRA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-4827054 Tetrapyrrole biosynthesis I none Brassica rapa A10p035580.1_BraROA R-BRA-1125533 A10p035580.1_BraROA [cytosol] R-BRA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119304 Putrescine biosynthesis II none Brassica rapa A10p035750.1_BraROA R-BRA-1128178 A10p035750.1_BraROA [cytosol] R-BRA-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119322 Leucodelphinidin biosynthesis none Brassica rapa A10p035750.1_BraROA R-BRA-1128178 A10p035750.1_BraROA [cytosol] R-BRA-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Brassica rapa A10p035750.1_BraROA R-BRA-9609575 A10p035750.1_BraROA [endoplasmic reticulum membrane] R-BRA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9609573 Tricin biosynthesis none Brassica rapa A10p035960.1_BraROA R-BRA-9916302-4 A10p035960.1_BraROA [nucleoplasm] R-BRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9916190 Root angle formation: elongation and curvature response none Brassica rapa A10p036220.1_BraROA R-BRA-9930242-3 A10p036220.1_BraROA [nucleoplasm] R-BRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9766881 TF network involved in salinity response none Brassica rapa A10p037160.1_BraROA R-BRA-9608693 A10p037160.1_BraROA [cytosol] R-BRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9608575 Reproductive meristem phase change none Brassica rapa A10p037460.1_BraROA R-BRA-1125928 A10p037460.1_BraROA [cytosol] R-BRA-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119484 Folate polyglutamylation II none Brassica rapa A10p037460.1_BraROA R-BRA-1125928 A10p037460.1_BraROA [cytosol] R-BRA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119523 Tetrahydrofolate biosynthesis II none Brassica rapa A10p037460.1_BraROA R-BRA-1125928 A10p037460.1_BraROA [cytosol] R-BRA-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119617 Folate polyglutamylation I none Brassica rapa A10p037670.1_BraROA R-BRA-9681885 A10p037670.1_BraROA [Golgi membrane] R-BRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119574 UDP-L-arabinose biosynthesis and transport none Brassica rapa A10p037740.1_BraROA R-BRA-1123998 A10p037740.1_BraROA [chloroplast] R-BRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119494 Tryptophan biosynthesis none Brassica rapa A10p039070.1_BraROA R-BRA-1128613 A10p039070.1_BraROA [cytosol] R-BRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119316 Phenylpropanoid biosynthesis none Brassica rapa A10p039290.1_BraROA R-BRA-5603891 A10p039290.1_BraROA [plastid stroma] R-BRA-1119420 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119420 Glutamate biosynthesis V none Brassica rapa A10p039290.1_BraROA R-BRA-1125410 A10p039290.1_BraROA [chloroplast stroma] R-BRA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119443 Ammonia assimilation cycle none Brassica rapa A10p039580.1_BraROA R-BRA-9608694 A10p039580.1_BraROA [cytosol] R-BRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928831 Severe drought none Brassica rapa A10p039580.1_BraROA R-BRA-9928774 A10p039580.1_BraROA [nucleoplasm] R-BRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9928831 Severe drought none Brassica rapa A10p039600.1_BraROA R-BRA-5655007-2 A10p039600.1_BraROA [Golgi lumen] R-BRA-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-5655010 Xylogalacturonan biosynthesis none Brassica rapa A10p039700.1_BraROA R-BRA-5149646 A10p039700.1_BraROA [plastid stroma] R-BRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119519 Calvin cycle none Brassica rapa A10p039700.1_BraROA R-BRA-1126652 A10p039700.1_BraROA [cytosol] R-BRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119570 Cytosolic glycolysis none Brassica rapa A10p039750.1_BraROA R-BRA-1124067-2 A10p039750.1_BraROA [amyloplast] R-BRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-1119477 Starch biosynthesis none Brassica rapa A10p039750.1_BraROA R-BRA-9626520-2 A10p039750.1_BraROA [plastid stroma] R-BRA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9626305 Regulatory network of nutrient accumulation none Brassica rapa A10p040460.1_BraROA R-BRA-9640723 A10p040460.1_BraROA [nucleoplasm] R-BRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9640887 G1/S transition none Brassica rapa A10p041010.1_BraROA R-BRA-8858070 A10p041010.1_BraROA [plasma membrane] R-BRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BRA-9639861 Development of root hair none Brassica rapa A4A49_00005 R-NAT-9608693-2 A4A49_00005 [cytosol] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_00058 R-NAT-1129723 A4A49_00058 [chloroplast] R-NAT-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119494 Tryptophan biosynthesis none Nicotiana attenuata A4A49_00090 R-NAT-8986605-2 A4A49_00090 [mitochondrial matrix] R-NAT-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119312 Photorespiration none Nicotiana attenuata A4A49_00090 R-NAT-1124620-2 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-NAT-1119351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119351 Mitochondrial pyruvate metabolism none Nicotiana attenuata A4A49_00090 R-NAT-1124620-2 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-NAT-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119533 TCA cycle (plant) none Nicotiana attenuata A4A49_00096 R-NAT-1130084 A4A49_00096 [cytosol] R-NAT-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119486 IAA biosynthesis I none Nicotiana attenuata A4A49_00116 R-NAT-9826691-3 A4A49_00116 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_00123 R-NAT-1127087 A4A49_00123 [cytosol] R-NAT-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119438 Secologanin and strictosidine biosynthesis none Nicotiana attenuata A4A49_00125 R-NAT-9658676 A4A49_00125 [cytosol] R-NAT-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119567 Beta-alanine biosynthesis I none Nicotiana attenuata A4A49_00140 R-NAT-1122541 A4A49_00140 [cytosol] R-NAT-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Nicotiana attenuata A4A49_00140 R-NAT-1122541 A4A49_00140 [cytosol] R-NAT-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Nicotiana attenuata A4A49_00168 R-NAT-9826597-3 A4A49_00168 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_00178 R-NAT-1122785-4 A4A49_00178 [cytosol] R-NAT-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119273 Lysine biosynthesis I none Nicotiana attenuata A4A49_00178 R-NAT-1126726-4 A4A49_00178 [cytosol] R-NAT-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119273 Lysine biosynthesis I none Nicotiana attenuata A4A49_00178 R-NAT-1122785-4 A4A49_00178 [cytosol] R-NAT-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119283 Lysine biosynthesis II none Nicotiana attenuata A4A49_00178 R-NAT-1126726-4 A4A49_00178 [cytosol] R-NAT-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119283 Lysine biosynthesis II none Nicotiana attenuata A4A49_00178 R-NAT-1122785-4 A4A49_00178 [cytosol] R-NAT-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119570 Cytosolic glycolysis none Nicotiana attenuata A4A49_00278 R-NAT-1129547-7 A4A49_00278 [cytosol] R-NAT-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119389 Phenylalanine biosynthesis I none Nicotiana attenuata A4A49_00278 R-NAT-1129547-7 A4A49_00278 [cytosol] R-NAT-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119400 Methionine biosynthesis II none Nicotiana attenuata A4A49_00278 R-NAT-1129547-7 A4A49_00278 [cytosol] R-NAT-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119506 tyrosine degradation I none Nicotiana attenuata A4A49_00279 R-NAT-1129547-4 A4A49_00279 [cytosol] R-NAT-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119389 Phenylalanine biosynthesis I none Nicotiana attenuata A4A49_00279 R-NAT-1129547-4 A4A49_00279 [cytosol] R-NAT-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119400 Methionine biosynthesis II none Nicotiana attenuata A4A49_00279 R-NAT-1129547-4 A4A49_00279 [cytosol] R-NAT-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119506 tyrosine degradation I none Nicotiana attenuata A4A49_00365 R-NAT-1126728 A4A49_00365 [plastid stroma] R-NAT-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119424 Plastid glycolysis none Nicotiana attenuata A4A49_00422 R-NAT-9675849 A4A49_00422 [nucleoplasm] R-NAT-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675824 DNA replication Initiation none Nicotiana attenuata A4A49_00426 R-NAT-1127031 A4A49_00426 [cytosol] R-NAT-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119460 Isoleucine biosynthesis from threonine none Nicotiana attenuata A4A49_00430 R-NAT-5655007-3 A4A49_00430 [Golgi lumen] R-NAT-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5655010 Xylogalacturonan biosynthesis none Nicotiana attenuata A4A49_00440 R-NAT-8854108-3 A4A49_00440 [cytosol] R-NAT-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119556 Choline biosynthesis I none Nicotiana attenuata A4A49_00442 R-NAT-8854108-2 A4A49_00442 [cytosol] R-NAT-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119556 Choline biosynthesis I none Nicotiana attenuata A4A49_00487 R-NAT-1123077-2 A4A49_00487 [cytosol] R-NAT-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119458 Glutamate degradation none Nicotiana attenuata A4A49_00509 R-NAT-1130032-2 A4A49_00509 [mitochondrial inner membrane] R-NAT-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119260 Cardiolipin biosynthesis none Nicotiana attenuata A4A49_00511 R-NAT-1126892 A4A49_00511 [cytosol] R-NAT-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119353 Linear furanocoumarin biosynthesis none Nicotiana attenuata A4A49_00558 R-NAT-1123563 A4A49_00558 [cytosol] R-NAT-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119379 Flavin biosynthesis none Nicotiana attenuata A4A49_00573 R-NAT-9639810 A4A49_00573 [cell wall] R-NAT-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639861 Development of root hair none Nicotiana attenuata A4A49_00590 R-NAT-5654957 A4A49_00590 [Golgi lumen] R-NAT-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654909 Xylan biosynthesis none Nicotiana attenuata A4A49_00653 R-NAT-9658681 A4A49_00653 [plasma membrane] R-NAT-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119567 Beta-alanine biosynthesis I none Nicotiana attenuata A4A49_00682 R-NAT-9611549-2 phospho-phosphorylated-CERK1 [plasma membrane] R-NAT-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9611432 Recognition of fungal and bacterial pathogens and immunity response none Nicotiana attenuata A4A49_00684 R-NAT-5679398-4 A4A49_00684 [cytosol] R-NAT-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5679411 Gibberellin signaling none Nicotiana attenuata A4A49_00686 R-NAT-1129184 A4A49_00686 [cytosol] R-NAT-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119273 Lysine biosynthesis I none Nicotiana attenuata A4A49_00686 R-NAT-1129184 A4A49_00686 [cytosol] R-NAT-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119283 Lysine biosynthesis II none Nicotiana attenuata A4A49_00686 R-NAT-5606505 A4A49_00686 [plastid stroma] R-NAT-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119419 Lysine biosynthesis VI none Nicotiana attenuata A4A49_00696 R-NAT-9640767 A4A49_00696 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_00696 R-NAT-9640767 A4A49_00696 [nucleoplasm] R-NAT-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675824 DNA replication Initiation none Nicotiana attenuata A4A49_00710 R-NAT-1128973 A4A49_00710 [cytosol] R-NAT-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Nicotiana attenuata A4A49_00710 R-NAT-1128973 A4A49_00710 [cytosol] R-NAT-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119438 Secologanin and strictosidine biosynthesis none Nicotiana attenuata A4A49_00710 R-NAT-1128973 A4A49_00710 [cytosol] R-NAT-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119486 IAA biosynthesis I none Nicotiana attenuata A4A49_00744 R-NAT-1126593 A4A49_00744 [endosome] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_00744 R-NAT-5679293 A4A49_00744 [plasma membrane] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_00744 R-NAT-8858098 A4A49_00744 [plasma membrane] R-NAT-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8858053 Polar auxin transport none Nicotiana attenuata A4A49_00907 R-NAT-5655075 A4A49_00907 [Golgi lumen] R-NAT-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5655101 Xyloglucan biosynthesis none Nicotiana attenuata A4A49_01011 R-NAT-1130394 A4A49_01011 [cytosol] R-NAT-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119452 Galactose degradation II none Nicotiana attenuata A4A49_01052 R-NAT-1124484 A4A49_01052 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_01111 R-NAT-1127723-2 A4A49_01111 [cytosol] R-NAT-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119331 Cysteine biosynthesis I none Nicotiana attenuata A4A49_01133 R-NAT-8987574-2 A4A49_01133 [mitochondrial matrix] R-NAT-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119311 Glycine biosynthesis I none Nicotiana attenuata A4A49_01142 R-NAT-5654840 A4A49_01142 [nucleoplasm] R-NAT-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654828 Strigolactone signaling none Nicotiana attenuata A4A49_01142 R-NAT-5654840 A4A49_01142 [nucleoplasm] R-NAT-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Nicotiana attenuata A4A49_01145 R-NAT-1125638 A4A49_01145 [cytosol] R-NAT-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119516 Trehalose biosynthesis I none Nicotiana attenuata A4A49_01156 R-NAT-9916160 A4A49_01156 [nucleoplasm] R-NAT-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9916190 Root angle formation: elongation and curvature response none Nicotiana attenuata A4A49_01177 R-NAT-9618056-7 A4A49_01177 [plasma membrane] R-NAT-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9618218 Arsenic uptake and detoxification none Nicotiana attenuata A4A49_01197 R-NAT-8933842 A4A49_01197 [cytosol] R-NAT-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8933811 Circadian rhythm none Nicotiana attenuata A4A49_01197 R-NAT-8933843 A4A49_01197 [nucleoplasm] R-NAT-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8933811 Circadian rhythm none Nicotiana attenuata A4A49_01240 R-NAT-9918175-4 A4A49_01240 [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_01310 R-NAT-9916252-2 OsEGT1 [nucleoplasm] R-NAT-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9916190 Root angle formation: elongation and curvature response none Nicotiana attenuata A4A49_01362 R-NAT-9618056 A4A49_01362 [plasma membrane] R-NAT-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9618218 Arsenic uptake and detoxification none Nicotiana attenuata A4A49_01413 R-NAT-1123895-2 A4A49_01413 [cytosol] R-NAT-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119334 Ethylene biosynthesis from methionine none Nicotiana attenuata A4A49_01413 R-NAT-1123895-2 A4A49_01413 [cytosol] R-NAT-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119624 Methionine salvage pathway none Nicotiana attenuata A4A49_01422 R-NAT-9675274-2 A4A49_01422 [nucleoplasm] R-NAT-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030654 Primary root development none Nicotiana attenuata A4A49_01463 R-NAT-9639957 A4A49_01463 [plasma membrane] R-NAT-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639861 Development of root hair none Nicotiana attenuata A4A49_01498 R-NAT-1122536 A4A49_01498 [cytosol] R-NAT-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119271 Threonine degradation none Nicotiana attenuata A4A49_01498 R-NAT-1122536 A4A49_01498 [cytosol] R-NAT-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119486 IAA biosynthesis I none Nicotiana attenuata A4A49_01498 R-NAT-9658656 A4A49_01498 [cytosol] R-NAT-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119567 Beta-alanine biosynthesis I none Nicotiana attenuata A4A49_01517 R-NAT-9916252-3 OsEGT1 [nucleoplasm] R-NAT-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9916190 Root angle formation: elongation and curvature response none Nicotiana attenuata A4A49_01520 R-NAT-1129169-2 A4A49_01520 [plastid stroma] R-NAT-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119308 Momilactone biosynthesis none Nicotiana attenuata A4A49_01536 R-NAT-1130327-10 A4A49_01536 [cytosol] R-NAT-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119586 Cyanate degradation none Nicotiana attenuata A4A49_01559 R-NAT-8987488 A4A49_01559 [mitochondrial matrix] R-NAT-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119312 Photorespiration none Nicotiana attenuata A4A49_01583 R-NAT-1127015 A4A49_01583 [cytosol] R-NAT-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119334 Ethylene biosynthesis from methionine none Nicotiana attenuata A4A49_01583 R-NAT-1127015 A4A49_01583 [cytosol] R-NAT-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119624 Methionine salvage pathway none Nicotiana attenuata A4A49_01617 R-NAT-1127076 A4A49_01617 [cytosol] R-NAT-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119418 Suberin biosynthesis none Nicotiana attenuata A4A49_01617 R-NAT-1127076 A4A49_01617 [cytosol] R-NAT-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119582 Phenylpropanoid biosynthesis, initial reactions none Nicotiana attenuata A4A49_01623 R-NAT-1125341 A4A49_01623 [cytosol] R-NAT-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119460 Isoleucine biosynthesis from threonine none Nicotiana attenuata A4A49_01623 R-NAT-1125341 A4A49_01623 [cytosol] R-NAT-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119600 Valine biosynthesis none Nicotiana attenuata A4A49_01653 R-NAT-1129739 A4A49_01653 [cytosol] R-NAT-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119389 Phenylalanine biosynthesis I none Nicotiana attenuata A4A49_01661 R-NAT-8879027 A4A49_01661 [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_01680 R-NAT-8987505-2 A4A49_01680 [mitochondrial matrix] R-NAT-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119312 Photorespiration none Nicotiana attenuata A4A49_01687 R-NAT-1123998 A4A49_01687 [chloroplast] R-NAT-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119494 Tryptophan biosynthesis none Nicotiana attenuata A4A49_01795 R-NAT-9826667 A4A49_01795 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_01824 R-NAT-1128257-2 A4A49_01824 [plastid stroma] R-NAT-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119529 Sulfate activation for sulfonation none Nicotiana attenuata A4A49_01827 R-NAT-9611477 phospho-phosphorylated-RLCK176 [cytosol] R-NAT-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9611432 Recognition of fungal and bacterial pathogens and immunity response none Nicotiana attenuata A4A49_01828 R-NAT-5149632-2 A4A49_01828 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_01845 R-NAT-1128534-2 A4A49_01845 [cytosol] R-NAT-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119437 Glutathione redox reactions I none Nicotiana attenuata A4A49_01858 R-NAT-6788026 A4A49_01858 [cytosol] R-NAT-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6788019 Salicylic acid signaling none Nicotiana attenuata A4A49_01914 R-NAT-5367777 A4A49_01914 [plastid stroma] R-NAT-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5367729 Strigolactone biosynthesis none Nicotiana attenuata A4A49_01952 R-NAT-1126996 A4A49_01952 [cytosol] R-NAT-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119316 Phenylpropanoid biosynthesis none Nicotiana attenuata A4A49_02019 R-NAT-1126996-3 A4A49_02019 [cytosol] R-NAT-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119316 Phenylpropanoid biosynthesis none Nicotiana attenuata A4A49_02021 R-NAT-1126996-2 A4A49_02021 [cytosol] R-NAT-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119316 Phenylpropanoid biosynthesis none Nicotiana attenuata A4A49_02111 R-NAT-9618057 A4A49_02111 [cytosol] R-NAT-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9618218 Arsenic uptake and detoxification none Nicotiana attenuata A4A49_02117 R-NAT-1128586 A4A49_02117 [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_02169 R-NAT-9640783 A4A49_02169 [nucleoplasm] R-NAT-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640760 G1 phase none Nicotiana attenuata A4A49_02200 R-NAT-9930216 ABI5 [nucleoplasm] R-NAT-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9766881 TF network involved in salinity response none Nicotiana attenuata A4A49_02271 R-NAT-1125374 A4A49_02271 [cytosol] R-NAT-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119586 Cyanate degradation none Nicotiana attenuata A4A49_02316 R-NAT-1124905 A4A49_02316 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_02352 R-NAT-1122827-3 A4A49_02352 [cytosol] R-NAT-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119334 Ethylene biosynthesis from methionine none Nicotiana attenuata A4A49_02355 R-NAT-1122351 A4A49_02355 [cytosol] R-NAT-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119354 Asparagine biosynthesis III none Nicotiana attenuata A4A49_02355 R-NAT-5633281 A4A49_02355 [cytosol] R-NAT-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119495 Citrulline biosynthesis none Nicotiana attenuata A4A49_02355 R-NAT-1122351 A4A49_02355 [cytosol] R-NAT-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119553 Asparagine biosynthesis none Nicotiana attenuata A4A49_02382 R-NAT-1128126-2 A4A49_02382 [endosome] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_02382 R-NAT-5679348-2 A4A49_02382 [plasma membrane] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_02394 R-NAT-4723654 A4A49_02394 [plastid stroma] R-NAT-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119464 Methylerythritol phosphate pathway none Nicotiana attenuata A4A49_02394 R-NAT-1130030 A4A49_02394 [cytosol] R-NAT-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119594 Pyridoxal 5'-phosphate biosynthesis none Nicotiana attenuata A4A49_02394 R-NAT-1130030 A4A49_02394 [cytosol] R-NAT-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119629 Thiamine biosynthesis none Nicotiana attenuata A4A49_02417 R-NAT-1128707-3 A4A49_02417 [cytosol] R-NAT-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Nicotiana attenuata A4A49_02417 R-NAT-1128707-3 A4A49_02417 [cytosol] R-NAT-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119370 Sterol biosynthesis none Nicotiana attenuata A4A49_02417 R-NAT-1128707-3 A4A49_02417 [cytosol] R-NAT-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119439 Cholesterol biosynthesis III (via desmosterol) none Nicotiana attenuata A4A49_02417 R-NAT-1128707-3 A4A49_02417 [cytosol] R-NAT-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119559 Cholesterol biosynthesis I none Nicotiana attenuata A4A49_02452 R-NAT-1124145-2 A4A49_02452 [mitochondrial matrix] R-NAT-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119445 Beta-alanine biosynthesis II none Nicotiana attenuata A4A49_02460 R-NAT-9826620-2 HOX12/ OsGT1 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_02460 R-NAT-9826620-2 HOX12/ OsGT1 [nucleoplasm] R-NAT-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Nicotiana attenuata A4A49_02483 R-NAT-9658589 A4A49_02483 [endoplasmic reticulum lumen] R-NAT-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119502 Allantoin degradation none Nicotiana attenuata A4A49_02501 R-NAT-9035727-3 A4A49_02501 [cytosol] R-NAT-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9035605 Regulation of seed size none Nicotiana attenuata A4A49_02501 R-NAT-9035692-3 A4A49_02501 [nucleoplasm] R-NAT-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9035605 Regulation of seed size none Nicotiana attenuata A4A49_02542 R-NAT-5654933 A4A49_02542 [Golgi lumen] R-NAT-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654909 Xylan biosynthesis none Nicotiana attenuata A4A49_02561 R-NAT-1126165-3 A4A49_02561 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_02561 R-NAT-5608120 A4A49_02561 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_02596 R-NAT-1123745-2 A4A49_02596 [endoplasmic reticulum membrane] R-NAT-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119260 Cardiolipin biosynthesis none Nicotiana attenuata A4A49_02596 R-NAT-1123745-2 A4A49_02596 [endoplasmic reticulum membrane] R-NAT-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119402 Phospholipid biosynthesis I none Nicotiana attenuata A4A49_02602 R-NAT-1122892 A4A49_02602 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_02602 R-NAT-1122892 A4A49_02602 [nucleoplasm] R-NAT-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030557 Lateral root initiation none Nicotiana attenuata A4A49_02602 R-NAT-1122892 A4A49_02602 [nucleoplasm] R-NAT-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030654 Primary root development none Nicotiana attenuata A4A49_02615 R-NAT-9025728-2 A4A49_02615 [plasma membrane] R-NAT-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9025727 Iron uptake and transport in root vascular system none Nicotiana attenuata A4A49_02617 R-NAT-9025728 A4A49_02617 [plasma membrane] R-NAT-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9025727 Iron uptake and transport in root vascular system none Nicotiana attenuata A4A49_02724 R-NAT-1130181-2 A4A49_02724 [plastid stroma] R-NAT-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119430 Chorismate biosynthesis none Nicotiana attenuata A4A49_02767 R-NAT-9675354 A4A49_02767 [nucleoplasm] R-NAT-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675508 Root elongation none Nicotiana attenuata A4A49_02767 R-NAT-9675335-2 A4A49_02767 [mitochondrial matrix] R-NAT-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675508 Root elongation none Nicotiana attenuata A4A49_02796 R-NAT-1126549 A4A49_02796 [cytosol] R-NAT-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119486 IAA biosynthesis I none Nicotiana attenuata A4A49_02805 R-NAT-9640701 A4A49_02805 [nucleoplasm] R-NAT-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640882 Assembly of pre-replication complex none Nicotiana attenuata A4A49_02805 R-NAT-9640701 A4A49_02805 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_02948 R-NAT-1124560-3 A4A49_02948 [cytosol] R-NAT-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119563 UDP-D-xylose biosynthesis none Nicotiana attenuata A4A49_02948 R-NAT-9681903-3 A4A49_02948 [Golgi lumen] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_02948 R-NAT-1124560-3 A4A49_02948 [cytosol] R-NAT-5654894 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654894 UDP-D-apiose biosynthesis none Nicotiana attenuata A4A49_02978 R-NAT-8854121-5 A4A49_02978 [cytosol] R-NAT-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119556 Choline biosynthesis I none Nicotiana attenuata A4A49_02990 R-NAT-1127442 A4A49_02990 [cytosol] R-NAT-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119281 Aspartate biosynthesis I none Nicotiana attenuata A4A49_02990 R-NAT-5632001 A4A49_02990 [plastid stroma] R-NAT-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119553 Asparagine biosynthesis none Nicotiana attenuata A4A49_03021 R-NAT-9826691 A4A49_03021 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_03026 R-NAT-1126172 A4A49_03026 [cytosol] R-NAT-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119379 Flavin biosynthesis none Nicotiana attenuata A4A49_03053 R-NAT-1130308 A4A49_03053 [plastid stroma] R-NAT-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119430 Chorismate biosynthesis none Nicotiana attenuata A4A49_03117 R-NAT-5655075-3 A4A49_03117 [Golgi lumen] R-NAT-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5655101 Xyloglucan biosynthesis none Nicotiana attenuata A4A49_03124 R-NAT-1125638-2 A4A49_03124 [cytosol] R-NAT-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119516 Trehalose biosynthesis I none Nicotiana attenuata A4A49_03138 R-NAT-1126602 A4A49_03138 [cytosol] R-NAT-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119273 Lysine biosynthesis I none Nicotiana attenuata A4A49_03138 R-NAT-1126602 A4A49_03138 [cytosol] R-NAT-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119283 Lysine biosynthesis II none Nicotiana attenuata A4A49_03138 R-NAT-5606494 A4A49_03138 [plastid stroma] R-NAT-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119419 Lysine biosynthesis VI none Nicotiana attenuata A4A49_03191 R-NAT-9675399 A4A49_03191 [nucleoplasm] R-NAT-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030654 Primary root development none Nicotiana attenuata A4A49_03265 R-NAT-5679455 A4A49_03265 [nucleoplasm] R-NAT-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5679411 Gibberellin signaling none Nicotiana attenuata A4A49_03265 R-NAT-6787020 A4A49_03265 [cytosol] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_03444 R-NAT-6787181 A4A49_03444 [cytosol] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_03523 R-NAT-5632264-3 A4A49_03523 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_03560 R-NAT-1127031-3 A4A49_03560 [cytosol] R-NAT-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119460 Isoleucine biosynthesis from threonine none Nicotiana attenuata A4A49_03574 R-NAT-1123096-2 A4A49_03574 [mitochondrial inner membrane] R-NAT-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119533 TCA cycle (plant) none Nicotiana attenuata A4A49_03575 R-NAT-1123096 A4A49_03575 [mitochondrial inner membrane] R-NAT-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119533 TCA cycle (plant) none Nicotiana attenuata A4A49_03578 R-NAT-1123867 A4A49_03578 [cytosol] R-NAT-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119370 Sterol biosynthesis none Nicotiana attenuata A4A49_03617 R-NAT-5083827 A4A49_03617 [mitochondrial matrix] R-NAT-1119319 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119319 Alanine biosynthesis III none Nicotiana attenuata A4A49_03617 R-NAT-5083827 A4A49_03617 [mitochondrial matrix] R-NAT-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119612 Cysteine degradation none Nicotiana attenuata A4A49_03668 R-NAT-1127443 A4A49_03668 [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_03668 R-NAT-1122818 A4A49_03668 [cytosol] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_03849 R-NAT-9675357 A4A49_03849 [nucleoplasm] R-NAT-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030680 Crown root development none Nicotiana attenuata A4A49_03875 R-NAT-1125340-2 A4A49_03875 [plastid stroma] R-NAT-1119274 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119274 Monoterpene biosynthesis none Nicotiana attenuata A4A49_03875 R-NAT-1125340-2 A4A49_03875 [plastid stroma] R-NAT-1119593 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119593 Oleoresin monoterpene volatiles biosynthesis none Nicotiana attenuata A4A49_03941 R-NAT-1122463 A4A49_03941 [cytosol] R-NAT-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119321 Glycerol degradation I none Nicotiana attenuata A4A49_03947 R-NAT-1124048 A4A49_03947 [cytosol] R-NAT-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119610 Biotin biosynthesis II none Nicotiana attenuata A4A49_03959 R-NAT-5149646-2 A4A49_03959 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_03959 R-NAT-1126652-2 A4A49_03959 [cytosol] R-NAT-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119570 Cytosolic glycolysis none Nicotiana attenuata A4A49_03964 R-NAT-1127292 A4A49_03964 [plastid stroma] R-NAT-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Nicotiana attenuata A4A49_04021 R-NAT-8987571 A4A49_04021 [peroxisomal matrix] R-NAT-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119312 Photorespiration none Nicotiana attenuata A4A49_04076 R-NAT-9658664-3 A4A49_04076 [plasma membrane] R-NAT-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119567 Beta-alanine biosynthesis I none Nicotiana attenuata A4A49_04093 R-NAT-9025230 A4A49_04093 [peroxisomal matrix] R-NAT-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119407 Ureide biosynthesis none Nicotiana attenuata A4A49_04166 R-NAT-1122827-2 A4A49_04166 [cytosol] R-NAT-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119334 Ethylene biosynthesis from methionine none Nicotiana attenuata A4A49_04168 R-NAT-1122827-6 A4A49_04168 [cytosol] R-NAT-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119334 Ethylene biosynthesis from methionine none Nicotiana attenuata A4A49_04217 R-NAT-9930242-3 A4A49_04217 [nucleoplasm] R-NAT-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9766881 TF network involved in salinity response none Nicotiana attenuata A4A49_04348 R-NAT-5655070-2 A4A49_04348 [Golgi lumen] R-NAT-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5655101 Xyloglucan biosynthesis none Nicotiana attenuata A4A49_04404 R-NAT-1125920 A4A49_04404 [cytosol] R-NAT-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119273 Lysine biosynthesis I none Nicotiana attenuata A4A49_04404 R-NAT-1125920 A4A49_04404 [cytosol] R-NAT-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119283 Lysine biosynthesis II none Nicotiana attenuata A4A49_04409 R-NAT-1124949 A4A49_04409 [plastid stroma] R-NAT-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119308 Momilactone biosynthesis none Nicotiana attenuata A4A49_04409 R-NAT-1124949 A4A49_04409 [plastid stroma] R-NAT-1119328 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119328 Oleoresin sesquiterpene volatiles biosynthesis none Nicotiana attenuata A4A49_04409 R-NAT-1129421 A4A49_04409 [chloroplast] R-NAT-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119348 Ent-kaurene biosynthesis none Nicotiana attenuata A4A49_04409 R-NAT-1124949 A4A49_04409 [plastid stroma] R-NAT-1119371 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119371 Oryzalexin A-F biosynthesis none Nicotiana attenuata A4A49_04409 R-NAT-1124949 A4A49_04409 [plastid stroma] R-NAT-1119521 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119521 Oryzalexin S biosynthesis none Nicotiana attenuata A4A49_04409 R-NAT-1129220 A4A49_04409 [cytosol] R-NAT-1119583 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119583 Phytocassane biosynthesis none Nicotiana attenuata A4A49_04409 R-NAT-9610718 A4A49_04409 [plastid stroma] R-NAT-9610720 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9610720 Oryzalide A biosynthesis none Nicotiana attenuata A4A49_04459 R-NAT-1123860 A4A49_04459 [cytosol] R-NAT-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119292 Cytokinins 7-N-glucoside biosynthesis none Nicotiana attenuata A4A49_04459 R-NAT-1123860 A4A49_04459 [cytosol] R-NAT-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119375 Cytokinins 9-N-glucoside biosynthesis none Nicotiana attenuata A4A49_04459 R-NAT-1123860 A4A49_04459 [cytosol] R-NAT-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119473 Cytokinins-O-glucoside biosynthesis none Nicotiana attenuata A4A49_04475 R-NAT-1129921 A4A49_04475 [cytosol] R-NAT-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119428 GDP-D-rhamnose biosynthesis none Nicotiana attenuata A4A49_04475 R-NAT-1129921 A4A49_04475 [cytosol] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_04490 R-NAT-9681905 A4A49_04490 [Golgi membrane] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_04499 R-NAT-1124249-3 A4A49_04499 [cytosol] R-NAT-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119428 GDP-D-rhamnose biosynthesis none Nicotiana attenuata A4A49_04499 R-NAT-1124249-3 A4A49_04499 [cytosol] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_04500 R-NAT-1124249 A4A49_04500 [cytosol] R-NAT-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119428 GDP-D-rhamnose biosynthesis none Nicotiana attenuata A4A49_04500 R-NAT-1124249 A4A49_04500 [cytosol] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_04582 R-NAT-9675481 A4A49_04582 [cytosol] R-NAT-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030654 Primary root development none Nicotiana attenuata A4A49_04596 R-NAT-1127527 A4A49_04596 [cytosol] R-NAT-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Nicotiana attenuata A4A49_04608 R-NAT-1129547-3 A4A49_04608 [cytosol] R-NAT-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119389 Phenylalanine biosynthesis I none Nicotiana attenuata A4A49_04608 R-NAT-1129547-3 A4A49_04608 [cytosol] R-NAT-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119400 Methionine biosynthesis II none Nicotiana attenuata A4A49_04608 R-NAT-1129547-3 A4A49_04608 [cytosol] R-NAT-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119506 tyrosine degradation I none Nicotiana attenuata A4A49_04654 R-NAT-4723660 A4A49_04654 [plastid stroma] R-NAT-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119464 Methylerythritol phosphate pathway none Nicotiana attenuata A4A49_04654 R-NAT-1125869 A4A49_04654 [cytosol] R-NAT-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119594 Pyridoxal 5'-phosphate biosynthesis none Nicotiana attenuata A4A49_04654 R-NAT-1125869 A4A49_04654 [cytosol] R-NAT-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119629 Thiamine biosynthesis none Nicotiana attenuata A4A49_04756 R-NAT-2685731 A4A49_04756 [cytosol] R-NAT-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119580 IAA biosynthesis II none Nicotiana attenuata A4A49_04773 R-NAT-1126955 A4A49_04773 [plastid] R-NAT-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119407 Ureide biosynthesis none Nicotiana attenuata A4A49_04811 R-NAT-9826609-3 A4A49_04811 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_04822 R-NAT-5632143 A4A49_04822 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_04822 R-NAT-5632143 A4A49_04822 [nucleoplasm] R-NAT-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924451 Shoot (tiller) formation and regulation of tiller angle none Nicotiana attenuata A4A49_04861 R-NAT-9658643-2 A4A49_04861 [cytosol] R-NAT-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119567 Beta-alanine biosynthesis I none Nicotiana attenuata A4A49_04871 R-NAT-9640671-5 A4A49_04871 [nucleoplasm] R-NAT-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640760 G1 phase none Nicotiana attenuata A4A49_04871 R-NAT-9640671-5 A4A49_04871 [nucleoplasm] R-NAT-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640887 G1/S transition none Nicotiana attenuata A4A49_04886 R-NAT-1129029 A4A49_04886 [cytosol] R-NAT-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119501 S-adenosyl-L-methionine cycle none Nicotiana attenuata A4A49_04912 R-NAT-1123832-2 A4A49_04912 [cytosol] R-NAT-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119304 Putrescine biosynthesis II none Nicotiana attenuata A4A49_04912 R-NAT-1123832-2 A4A49_04912 [cytosol] R-NAT-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119447 Putrescine biosynthesis I none Nicotiana attenuata A4A49_04914 R-NAT-1125093 A4A49_04914 [cytosol] R-NAT-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119456 Brassinosteroid biosynthesis II none Nicotiana attenuata A4A49_04996 R-NAT-1122783 A4A49_04996 [chloroplast stroma] R-NAT-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119402 Phospholipid biosynthesis I none Nicotiana attenuata A4A49_05022 R-NAT-9916125-2 A4A49_05022 [nucleoplasm] R-NAT-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9916190 Root angle formation: elongation and curvature response none Nicotiana attenuata A4A49_05022 R-NAT-9916231-2 A4A49_05022 [cytosol] R-NAT-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9916190 Root angle formation: elongation and curvature response none Nicotiana attenuata A4A49_05022 R-NAT-9916199-2 phospho-A4A49_05022 [cytosol] R-NAT-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9916190 Root angle formation: elongation and curvature response none Nicotiana attenuata A4A49_05025 R-NAT-1126115 A4A49_05025 [cytosol] R-NAT-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119452 Galactose degradation II none Nicotiana attenuata A4A49_05025 R-NAT-1126115 A4A49_05025 [cytosol] R-NAT-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119465 Sucrose biosynthesis none Nicotiana attenuata A4A49_05124 R-NAT-1127140 A4A49_05124 [cytosol] R-NAT-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119403 Removal of superoxide radicals none Nicotiana attenuata A4A49_05162 R-NAT-9640708-2 phospho-A4A49_05162 [nucleoplasm] R-NAT-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640760 G1 phase none Nicotiana attenuata A4A49_05162 R-NAT-9640770-2 A4A49_05162 [nucleoplasm] R-NAT-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640760 G1 phase none Nicotiana attenuata A4A49_05162 R-NAT-9640708-2 phospho-A4A49_05162 [nucleoplasm] R-NAT-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640887 G1/S transition none Nicotiana attenuata A4A49_05179 R-NAT-1127299 A4A49_05179 [cytosol] R-NAT-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119298 Glutathione redox reactions II none Nicotiana attenuata A4A49_05179 R-NAT-1127299 A4A49_05179 [cytosol] R-NAT-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119437 Glutathione redox reactions I none Nicotiana attenuata A4A49_05206 R-NAT-5633387 A4A49_05206 [mitochondrial matrix] R-NAT-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119445 Beta-alanine biosynthesis II none Nicotiana attenuata A4A49_05213 R-NAT-1130231 A4A49_05213 [endoplasmic reticulum membrane] R-NAT-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119325 Sphingolipid metabolism none Nicotiana attenuata A4A49_05255 R-NAT-9618186 A4A49_05255 [plant-type vacuole membrane] R-NAT-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9618218 Arsenic uptake and detoxification none Nicotiana attenuata A4A49_05289 R-NAT-1124791 A4A49_05289 [cytosol] R-NAT-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119610 Biotin biosynthesis II none Nicotiana attenuata A4A49_05302 R-NAT-5221144-2 A4A49_05302 [plastid] R-NAT-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119374 Abscisic acid biosynthesis none Nicotiana attenuata A4A49_05321 R-NAT-5606478 A4A49_05321 [plastid stroma] R-NAT-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119419 Lysine biosynthesis VI none Nicotiana attenuata A4A49_05370 R-NAT-1126421 A4A49_05370 [cytosol] R-NAT-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119428 GDP-D-rhamnose biosynthesis none Nicotiana attenuata A4A49_05370 R-NAT-1126421 A4A49_05370 [cytosol] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_05371 R-NAT-1128197-2 A4A49_05371 [plastid stroma] R-NAT-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119430 Chorismate biosynthesis none Nicotiana attenuata A4A49_05372 R-NAT-1130247-2 A4A49_05372 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_05466 R-NAT-1123250-2 A4A49_05466 [cytosol] R-NAT-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119265 Tetrahydrofolate biosynthesis I none Nicotiana attenuata A4A49_05466 R-NAT-1123250-2 A4A49_05466 [cytosol] R-NAT-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119523 Tetrahydrofolate biosynthesis II none Nicotiana attenuata A4A49_05478 R-NAT-9920344-4 A4A49_05478 [nucleoplasm] R-NAT-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8934108 Short day regulated expression of florigens none Nicotiana attenuata A4A49_05587 R-NAT-1250418-3 A4A49_05587 [cytosol] R-NAT-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119374 Abscisic acid biosynthesis none Nicotiana attenuata A4A49_05587 R-NAT-1129637-3 A4A49_05587 [cytosol] R-NAT-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119486 IAA biosynthesis I none Nicotiana attenuata A4A49_05656 R-NAT-1126373 A4A49_05656 [cytosol] R-NAT-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Nicotiana attenuata A4A49_05701 R-NAT-1129723-2 A4A49_05701 [chloroplast] R-NAT-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119494 Tryptophan biosynthesis none Nicotiana attenuata A4A49_05702 R-NAT-1129616 A4A49_05702 [cytosol] R-NAT-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119300 Glycolipid desaturation none Nicotiana attenuata A4A49_05704 R-NAT-1128950-2 A4A49_05704 [cytosol] R-NAT-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119379 Flavin biosynthesis none Nicotiana attenuata A4A49_05710 R-NAT-9826680-3 A4A49_05710 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_05736 R-NAT-1124083-2 A4A49_05736 [cytosol] R-NAT-1119323 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119323 Lipid-A-precursor biosynthesis none Nicotiana attenuata A4A49_05781 R-NAT-9826692 A4A49_05781 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_05800 R-NAT-1129208-2 A4A49_05800 [chloroplast envelope] R-NAT-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119402 Phospholipid biosynthesis I none Nicotiana attenuata A4A49_05917 R-NAT-1130202-3 A4A49_05917 [cytosol] R-NAT-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119410 Ascorbate biosynthesis none Nicotiana attenuata A4A49_05934 R-NAT-1123832 A4A49_05934 [cytosol] R-NAT-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119304 Putrescine biosynthesis II none Nicotiana attenuata A4A49_05934 R-NAT-1123832 A4A49_05934 [cytosol] R-NAT-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119447 Putrescine biosynthesis I none Nicotiana attenuata A4A49_05999 R-NAT-1124939 A4A49_05999 [cytosol] R-NAT-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119540 Leucine biosynthesis none Nicotiana attenuata A4A49_06006 R-NAT-5221147-2 A4A49_06006 [cytosol] R-NAT-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-3899351 Abscisic acid (ABA) mediated signaling none Nicotiana attenuata A4A49_06048 R-NAT-9918175-2 A4A49_06048 [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_06061 R-NAT-4827041-2 A4A49_06061 [plastid stroma] R-NAT-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-4827054 Tetrapyrrole biosynthesis I none Nicotiana attenuata A4A49_06099 R-NAT-1123482 A4A49_06099 [plastid stroma] R-NAT-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119367 Polyisoprenoid biosynthesis none Nicotiana attenuata A4A49_06118 R-NAT-5138500-2 A4A49_06118 [plastid stroma] R-NAT-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119263 Arginine biosynthesis none Nicotiana attenuata A4A49_06118 R-NAT-1129397-2 A4A49_06118 [cytosol] R-NAT-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119273 Lysine biosynthesis I none Nicotiana attenuata A4A49_06118 R-NAT-1129397-2 A4A49_06118 [cytosol] R-NAT-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119283 Lysine biosynthesis II none Nicotiana attenuata A4A49_06118 R-NAT-1129397-2 A4A49_06118 [cytosol] R-NAT-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119295 Homoserine biosynthesis none Nicotiana attenuata A4A49_06118 R-NAT-5138500-2 A4A49_06118 [plastid stroma] R-NAT-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119539 Ornithine biosynthesis none Nicotiana attenuata A4A49_06118 R-NAT-5138500-2 A4A49_06118 [plastid stroma] R-NAT-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119622 Arginine biosynthesis II (acetyl cycle) none Nicotiana attenuata A4A49_06146 R-NAT-1128431-2 A4A49_06146 [cytosol] R-NAT-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119316 Phenylpropanoid biosynthesis none Nicotiana attenuata A4A49_06174 R-NAT-1129896-2 A4A49_06174 [mitochondrial matrix] R-NAT-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119533 TCA cycle (plant) none Nicotiana attenuata A4A49_06184 R-NAT-1125550 A4A49_06184 [cytosol] R-NAT-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119623 Acyl-CoA synthetase pathway none Nicotiana attenuata A4A49_06189 R-NAT-9640664 A4A49_06189 [nucleoplasm] R-NAT-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640760 G1 phase none Nicotiana attenuata A4A49_06281 R-NAT-1128606 A4A49_06281 [mitochondrial matrix] R-NAT-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119365 Lysine degradation II none Nicotiana attenuata A4A49_06281 R-NAT-1173244 A4A49_06281 [mitochondrial matrix] R-NAT-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119533 TCA cycle (plant) none Nicotiana attenuata A4A49_06304 R-NAT-1125967-2 A4A49_06304 [cytosol] R-NAT-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119316 Phenylpropanoid biosynthesis none Nicotiana attenuata A4A49_06410 R-NAT-1126238 A4A49_06410 [chloroplast] R-NAT-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119494 Tryptophan biosynthesis none Nicotiana attenuata A4A49_06433 R-NAT-1130202 A4A49_06433 [cytosol] R-NAT-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119410 Ascorbate biosynthesis none Nicotiana attenuata A4A49_06441 R-NAT-5632241 A4A49_06441 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_06476 R-NAT-1130327-9 A4A49_06476 [cytosol] R-NAT-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119586 Cyanate degradation none Nicotiana attenuata A4A49_06493 R-NAT-9675391-2 A4A49_06493 [nucleoplasm] R-NAT-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675508 Root elongation none Nicotiana attenuata A4A49_06506 R-NAT-1128126 A4A49_06506 [endosome] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_06506 R-NAT-5679348 A4A49_06506 [plasma membrane] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_06540 R-NAT-5655007 A4A49_06540 [Golgi lumen] R-NAT-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5655010 Xylogalacturonan biosynthesis none Nicotiana attenuata A4A49_06588 R-NAT-5632301-2 A4A49_06588 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_06588 R-NAT-5632301-2 A4A49_06588 [nucleoplasm] R-NAT-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654828 Strigolactone signaling none Nicotiana attenuata A4A49_06588 R-NAT-5632301-2 A4A49_06588 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_06647 R-NAT-1123465 A4A49_06647 [plastid stroma] R-NAT-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119424 Plastid glycolysis none Nicotiana attenuata A4A49_06647 R-NAT-5633368 A4A49_06647 [cytosol] R-NAT-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119601 Trehalose degradation II none Nicotiana attenuata A4A49_06704 R-NAT-1128626 A4A49_06704 [cytosol] R-NAT-1119581 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119581 Thiosulfate disproportionation III (rhodanese) none Nicotiana attenuata A4A49_06704 R-NAT-1128626 A4A49_06704 [cytosol] R-NAT-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119612 Cysteine degradation none Nicotiana attenuata A4A49_06739 R-NAT-1127999 A4A49_06739 [mitochondrial inner membrane] R-NAT-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119260 Cardiolipin biosynthesis none Nicotiana attenuata A4A49_06981 R-NAT-9608678 A4A49_06981 [cytosol] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_06981 R-NAT-8986843 A4A49_06981 [nucleoplasm] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_07057 R-NAT-1127338 A4A49_07057 [mitochondrial inner membrane] R-NAT-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119402 Phospholipid biosynthesis I none Nicotiana attenuata A4A49_07132 R-NAT-1126531-2 A4A49_07132 [cytosol] R-NAT-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119410 Ascorbate biosynthesis none Nicotiana attenuata A4A49_07132 R-NAT-1126531-2 A4A49_07132 [cytosol] R-NAT-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119628 GDP-mannose metabolism none Nicotiana attenuata A4A49_07163 R-NAT-1124523 A4A49_07163 [cytosol] R-NAT-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119460 Isoleucine biosynthesis from threonine none Nicotiana attenuata A4A49_07163 R-NAT-1124523 A4A49_07163 [cytosol] R-NAT-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119600 Valine biosynthesis none Nicotiana attenuata A4A49_07173 R-NAT-9639171 A4A49_07173 [plant-type vacuole membrane] R-NAT-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639136 Response to Aluminum stress none Nicotiana attenuata A4A49_07183 R-NAT-5654911-2 A4A49_07183 [Golgi lumen] R-NAT-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654909 Xylan biosynthesis none Nicotiana attenuata A4A49_07259 R-NAT-1129411 A4A49_07259 [cytosol] R-NAT-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119496 Pantothenate biosynthesis I none Nicotiana attenuata A4A49_07259 R-NAT-1129411 A4A49_07259 [cytosol] R-NAT-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119544 Pantothenate biosynthesis II none Nicotiana attenuata A4A49_07272 R-NAT-6788201 A4A49_07272 [nucleoplasm] R-NAT-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6788019 Salicylic acid signaling none Nicotiana attenuata A4A49_07300 R-NAT-8879009-2 A4A49_07300 [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_07336 R-NAT-9611557 RAC1 [plasma membrane] R-NAT-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9611432 Recognition of fungal and bacterial pathogens and immunity response none Nicotiana attenuata A4A49_07409 R-NAT-9675297 A4A49_07409 [mitochondrion] R-NAT-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030654 Primary root development none Nicotiana attenuata A4A49_07420 R-NAT-9611465-2 A4A49_07420 [nucleoplasm] R-NAT-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9611432 Recognition of fungal and bacterial pathogens and immunity response none Nicotiana attenuata A4A49_07420 R-NAT-9611445-2 A4A49_07420 [nucleoplasm] R-NAT-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9611432 Recognition of fungal and bacterial pathogens and immunity response none Nicotiana attenuata A4A49_07431 R-NAT-1125926-2 A4A49_07431 [cytosol] R-NAT-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119273 Lysine biosynthesis I none Nicotiana attenuata A4A49_07431 R-NAT-1125926-2 A4A49_07431 [cytosol] R-NAT-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119283 Lysine biosynthesis II none Nicotiana attenuata A4A49_07431 R-NAT-1125926-2 A4A49_07431 [cytosol] R-NAT-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119295 Homoserine biosynthesis none Nicotiana attenuata A4A49_07431 R-NAT-5606498-2 A4A49_07431 [plastid stroma] R-NAT-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119419 Lysine biosynthesis VI none Nicotiana attenuata A4A49_07451 R-NAT-1128328 A4A49_07451 [cytosol] R-NAT-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119615 Mevalonate pathway none Nicotiana attenuata A4A49_07457 R-NAT-9035614 A4A49_07457 [cytosol] R-NAT-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9035605 Regulation of seed size none Nicotiana attenuata A4A49_07457 R-NAT-9035651 A4A49_07457 [nucleoplasm] R-NAT-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9035605 Regulation of seed size none Nicotiana attenuata A4A49_07576 R-NAT-1123733-2 A4A49_07576 [cytosol] R-NAT-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119484 Folate polyglutamylation II none Nicotiana attenuata A4A49_07577 R-NAT-1123733 A4A49_07577 [cytosol] R-NAT-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119484 Folate polyglutamylation II none Nicotiana attenuata A4A49_07601 R-NAT-8879029-10 DREB1G [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_07601 R-NAT-8879085-10 A4A49_07601 [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_07606 R-NAT-5679470-4 A4A49_07606 [nucleoplasm] R-NAT-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5679411 Gibberellin signaling none Nicotiana attenuata A4A49_07686 R-NAT-1128069 A4A49_07686 [cytosol] R-NAT-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Nicotiana attenuata A4A49_07686 R-NAT-1128069 A4A49_07686 [cytosol] R-NAT-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Nicotiana attenuata A4A49_07694 R-NAT-1127161 A4A49_07694 [cytosol] R-NAT-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119486 IAA biosynthesis I none Nicotiana attenuata A4A49_07696 R-NAT-6786908 A4A49_07696 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_07696 R-NAT-9826697 A4A49_07696 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_07705 R-NAT-1127989 A4A49_07705 [plastid stroma] R-NAT-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119430 Chorismate biosynthesis none Nicotiana attenuata A4A49_07717 R-NAT-1125182 A4A49_07717 [plastid stroma] R-NAT-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119430 Chorismate biosynthesis none Nicotiana attenuata A4A49_07736 R-NAT-5608137 A4A49_07736 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_07835 R-NAT-1127899-2 A4A49_07835 [cytosol] R-NAT-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119370 Sterol biosynthesis none Nicotiana attenuata A4A49_07870 R-NAT-9918201 A4A49_07870 [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_07960 R-NAT-1129169 A4A49_07960 [plastid stroma] R-NAT-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119308 Momilactone biosynthesis none Nicotiana attenuata A4A49_07967 R-NAT-1128804 A4A49_07967 [cytosol] R-NAT-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119516 Trehalose biosynthesis I none Nicotiana attenuata A4A49_07974 R-NAT-9618056-6 A4A49_07974 [plasma membrane] R-NAT-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9618218 Arsenic uptake and detoxification none Nicotiana attenuata A4A49_08043 R-NAT-1130036 A4A49_08043 [endoplasmic reticulum membrane] R-NAT-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119402 Phospholipid biosynthesis I none Nicotiana attenuata A4A49_08046 R-NAT-1129600 A4A49_08046 [cytosol] R-NAT-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119407 Ureide biosynthesis none Nicotiana attenuata A4A49_08075 R-NAT-9030976-2 A4A49_08075 [nucleoplasm] R-NAT-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654828 Strigolactone signaling none Nicotiana attenuata A4A49_08075 R-NAT-9030976-2 A4A49_08075 [nucleoplasm] R-NAT-9030908 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030908 Underwater shoot and internode elongation none Nicotiana attenuata A4A49_08075 R-NAT-9030976-2 A4A49_08075 [nucleoplasm] R-NAT-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9035605 Regulation of seed size none Nicotiana attenuata A4A49_08075 R-NAT-9035631-2 A4A49_08075 [cytosol] R-NAT-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9035605 Regulation of seed size none Nicotiana attenuata A4A49_08075 R-NAT-9030976-2 A4A49_08075 [nucleoplasm] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_08075 R-NAT-9035631-2 A4A49_08075 [cytosol] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_08075 R-NAT-9608743-2 A4A49_08075 [cytosol] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_08075 R-NAT-9608705-2 A4A49_08075 [nucleoplasm] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_08101 R-NAT-5679402 A4A49_08101 [nucleoplasm] R-NAT-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5679411 Gibberellin signaling none Nicotiana attenuata A4A49_08105 R-NAT-9025430 A4A49_08105 [endoplasmic reticulum membrane] R-NAT-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119325 Sphingolipid metabolism none Nicotiana attenuata A4A49_08119 R-NAT-8987557 A4A49_08119 [mitochondrial matrix] R-NAT-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119312 Photorespiration none Nicotiana attenuata A4A49_08120 R-NAT-5632301 A4A49_08120 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_08120 R-NAT-5632301 A4A49_08120 [nucleoplasm] R-NAT-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654828 Strigolactone signaling none Nicotiana attenuata A4A49_08120 R-NAT-5632301 A4A49_08120 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_08136 R-NAT-2685732 A4A49_08136 [cytosol] R-NAT-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119580 IAA biosynthesis II none Nicotiana attenuata A4A49_08184 R-NAT-2960790 A4A49_08184 [cytosol] R-NAT-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119386 UDP-N-acetylgalactosamine biosynthesis none Nicotiana attenuata A4A49_08184 R-NAT-2960790 A4A49_08184 [cytosol] R-NAT-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030654 Primary root development none Nicotiana attenuata A4A49_08204 R-NAT-1129547-5 A4A49_08204 [cytosol] R-NAT-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119389 Phenylalanine biosynthesis I none Nicotiana attenuata A4A49_08204 R-NAT-1129547-5 A4A49_08204 [cytosol] R-NAT-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119400 Methionine biosynthesis II none Nicotiana attenuata A4A49_08204 R-NAT-1129547-5 A4A49_08204 [cytosol] R-NAT-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119506 tyrosine degradation I none Nicotiana attenuata A4A49_08220 R-NAT-5654942 A4A49_08220 [Golgi lumen] R-NAT-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654909 Xylan biosynthesis none Nicotiana attenuata A4A49_08245 R-NAT-5632341 A4A49_08245 [cytosol] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_08245 R-NAT-5632221 phospho-A4A49_08245 [cytosol] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_08245 R-NAT-5632170 phospho-A4A49_08245 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_08339 R-NAT-1129514-2 A4A49_08339 [chloroplast] R-NAT-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119579 Glycine betaine biosynthesis III none Nicotiana attenuata A4A49_08340 R-NAT-6788036 A4A49_08340 [cytosol] R-NAT-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6788019 Salicylic acid signaling none Nicotiana attenuata A4A49_08340 R-NAT-1126611 A4A49_08340 [nucleoplasm] R-NAT-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6788019 Salicylic acid signaling none Nicotiana attenuata A4A49_08367 R-NAT-9826604 A4A49_08367 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_08395 R-NAT-1122398 A4A49_08395 [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_08488 R-NAT-1123745 A4A49_08488 [endoplasmic reticulum membrane] R-NAT-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119260 Cardiolipin biosynthesis none Nicotiana attenuata A4A49_08488 R-NAT-1123745 A4A49_08488 [endoplasmic reticulum membrane] R-NAT-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119402 Phospholipid biosynthesis I none Nicotiana attenuata A4A49_08515 R-NAT-9025471 A4A49_08515 [endoplasmic reticulum membrane] R-NAT-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119325 Sphingolipid metabolism none Nicotiana attenuata A4A49_08515 R-NAT-1127934 A4A49_08515 [cytosol] R-NAT-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119610 Biotin biosynthesis II none Nicotiana attenuata A4A49_08570 R-NAT-1123477 A4A49_08570 [cytosol] R-NAT-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119451 Xylose degradation none Nicotiana attenuata A4A49_08592 R-NAT-9639016-2 A4A49_08592 [cytosol] R-NAT-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119410 Ascorbate biosynthesis none Nicotiana attenuata A4A49_08592 R-NAT-9639016-2 A4A49_08592 [cytosol] R-NAT-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119434 Phytic acid biosynthesis (lipid-independent) none Nicotiana attenuata A4A49_08599 R-NAT-1128431 A4A49_08599 [cytosol] R-NAT-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119316 Phenylpropanoid biosynthesis none Nicotiana attenuata A4A49_08622 R-NAT-9826683 HSFB4A [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_08772 R-NAT-1123819-2 A4A49_08772 [plastid stroma] R-NAT-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119464 Methylerythritol phosphate pathway none Nicotiana attenuata A4A49_08786 R-NAT-9924379 HSFA2D [nucleoplasm] R-NAT-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924451 Shoot (tiller) formation and regulation of tiller angle none Nicotiana attenuata A4A49_08795 R-NAT-8933787-2 A4A49_08795 [nucleoplasm] R-NAT-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8933811 Circadian rhythm none Nicotiana attenuata A4A49_08798 R-NAT-1125237 A4A49_08798 [mitochondrial matrix] R-NAT-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119533 TCA cycle (plant) none Nicotiana attenuata A4A49_08826 R-NAT-9626449 A4A49_08826 [cytosol] R-NAT-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9626305 Regulatory network of nutrient accumulation none Nicotiana attenuata A4A49_08837 R-NAT-5679398 A4A49_08837 [cytosol] R-NAT-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5679411 Gibberellin signaling none Nicotiana attenuata A4A49_08858 R-NAT-9640708 phospho-A4A49_08858 [nucleoplasm] R-NAT-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640760 G1 phase none Nicotiana attenuata A4A49_08858 R-NAT-9640770 A4A49_08858 [nucleoplasm] R-NAT-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640760 G1 phase none Nicotiana attenuata A4A49_08858 R-NAT-9640708 phospho-A4A49_08858 [nucleoplasm] R-NAT-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640887 G1/S transition none Nicotiana attenuata A4A49_08912 R-NAT-8858112-2 A4A49_08912 [plasma membrane] R-NAT-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8858053 Polar auxin transport none Nicotiana attenuata A4A49_09102 R-NAT-5631953 A4A49_09102 [mitochondrial matrix] R-NAT-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119289 Arginine degradation none Nicotiana attenuata A4A49_09102 R-NAT-1124214 A4A49_09102 [cytosol] R-NAT-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119318 Proline biosynthesis V (from arginine) none Nicotiana attenuata A4A49_09102 R-NAT-1124214 A4A49_09102 [cytosol] R-NAT-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119610 Biotin biosynthesis II none Nicotiana attenuata A4A49_09106 R-NAT-9826635 PCF8 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_09209 R-NAT-1127173-4 A4A49_09209 [cytosol] R-NAT-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119540 Leucine biosynthesis none Nicotiana attenuata A4A49_09252 R-NAT-1123404 A4A49_09252 [peroxisomal matrix] R-NAT-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119407 Ureide biosynthesis none Nicotiana attenuata A4A49_09272 R-NAT-1123092-2 A4A49_09272 [cytosol] R-NAT-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119278 PRPP biosynthesis I none Nicotiana attenuata A4A49_09275 R-NAT-9916305-3 A4A49_09275 [nucleoplasm] R-NAT-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9916190 Root angle formation: elongation and curvature response none Nicotiana attenuata A4A49_09318 R-NAT-1127523-3 A4A49_09318 [cytosol] R-NAT-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Nicotiana attenuata A4A49_09352 R-NAT-1130202-2 A4A49_09352 [cytosol] R-NAT-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119410 Ascorbate biosynthesis none Nicotiana attenuata A4A49_09482 R-NAT-9675838 A4A49_09482 [nucleoplasm] R-NAT-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675815 Leading strand synthesis none Nicotiana attenuata A4A49_09483 R-NAT-1125151-3 A4A49_09483 [cytosol] R-NAT-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119400 Methionine biosynthesis II none Nicotiana attenuata A4A49_09483 R-NAT-1125151-3 A4A49_09483 [cytosol] R-NAT-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119501 S-adenosyl-L-methionine cycle none Nicotiana attenuata A4A49_09500 R-NAT-8868961 A4A49_09500 [plant-type vacuole membrane] R-NAT-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8868949 Intracellular auxin transport none Nicotiana attenuata A4A49_09521 R-NAT-9920344 A4A49_09521 [nucleoplasm] R-NAT-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8934108 Short day regulated expression of florigens none Nicotiana attenuata A4A49_09526 R-NAT-8987531-3 A4A49_09526 [chloroplast] R-NAT-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119312 Photorespiration none Nicotiana attenuata A4A49_09526 R-NAT-1125951-3 A4A49_09526 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_09528 R-NAT-1126531 A4A49_09528 [cytosol] R-NAT-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119410 Ascorbate biosynthesis none Nicotiana attenuata A4A49_09528 R-NAT-1126531 A4A49_09528 [cytosol] R-NAT-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119628 GDP-mannose metabolism none Nicotiana attenuata A4A49_09557 R-NAT-8879040 A4A49_09557 [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_09595 R-NAT-1122326 A4A49_09595 [cytosol] R-NAT-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119438 Secologanin and strictosidine biosynthesis none Nicotiana attenuata A4A49_09605 R-NAT-1122974-5 A4A49_09605 [mitochondrial matrix] R-NAT-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119479 Valine degradation none Nicotiana attenuata A4A49_09650 R-NAT-1129964 A4A49_09650 [cytosol] R-NAT-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119378 Myo-inositol biosynthesis none Nicotiana attenuata A4A49_09650 R-NAT-1129964 A4A49_09650 [cytosol] R-NAT-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119434 Phytic acid biosynthesis (lipid-independent) none Nicotiana attenuata A4A49_09766 R-NAT-5679470-2 A4A49_09766 [nucleoplasm] R-NAT-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5679411 Gibberellin signaling none Nicotiana attenuata A4A49_09823 R-NAT-9675818 A4A49_09823 [nucleoplasm] R-NAT-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675815 Leading strand synthesis none Nicotiana attenuata A4A49_09850 R-NAT-1128263 A4A49_09850 [plastid stroma] R-NAT-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119509 Histidine biosynthesis I none Nicotiana attenuata A4A49_09870 R-NAT-9640694 A4A49_09870 [nucleoplasm] R-NAT-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640882 Assembly of pre-replication complex none Nicotiana attenuata A4A49_09870 R-NAT-9640694 A4A49_09870 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_09904 R-NAT-5632251 A4A49_09904 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_09917 R-NAT-1127243 A4A49_09917 [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_09917 R-NAT-9918268 soluble Starch Synthase (SSIIIA/SSIII-2) [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_09977 R-NAT-1123717-5 A4A49_09977 [cytosol] R-NAT-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119395 Maackiain biosynthesis none Nicotiana attenuata A4A49_09977 R-NAT-1123717-5 A4A49_09977 [cytosol] R-NAT-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119453 Medicarpin biosynthesis none Nicotiana attenuata A4A49_09984 R-NAT-9924543-2 CYP714D1/EUI1 [endoplasmic reticulum membrane] R-NAT-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Nicotiana attenuata A4A49_10018 R-NAT-9916124 OsPRX95 [extracellular region] R-NAT-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119403 Removal of superoxide radicals none Nicotiana attenuata A4A49_10018 R-NAT-9916124 OsPRX95 [extracellular region] R-NAT-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9607185 Generation of superoxide radicals none Nicotiana attenuata A4A49_10033 R-NAT-9640886-2 A4A49_10033 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_10097 R-NAT-1124778 A4A49_10097 [plastid stroma] R-NAT-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119464 Methylerythritol phosphate pathway none Nicotiana attenuata A4A49_10118 R-NAT-5654840-2 A4A49_10118 [nucleoplasm] R-NAT-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654828 Strigolactone signaling none Nicotiana attenuata A4A49_10118 R-NAT-5654840-2 A4A49_10118 [nucleoplasm] R-NAT-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Nicotiana attenuata A4A49_10140 R-NAT-9930242-2 A4A49_10140 [nucleoplasm] R-NAT-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9766881 TF network involved in salinity response none Nicotiana attenuata A4A49_10146 R-NAT-5608102-2 A4A49_10146 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_10146 R-NAT-1123690-2 A4A49_10146 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_10304 R-NAT-1130189 A4A49_10304 [cytosol] R-NAT-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Nicotiana attenuata A4A49_10304 R-NAT-1130189 A4A49_10304 [cytosol] R-NAT-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119438 Secologanin and strictosidine biosynthesis none Nicotiana attenuata A4A49_10304 R-NAT-1130189 A4A49_10304 [cytosol] R-NAT-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119486 IAA biosynthesis I none Nicotiana attenuata A4A49_10325 R-NAT-6787933 A4A49_10325 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_10384 R-NAT-1130344 A4A49_10384 [cytosol] R-NAT-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119389 Phenylalanine biosynthesis I none Nicotiana attenuata A4A49_10400 R-NAT-1126531-4 A4A49_10400 [cytosol] R-NAT-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119410 Ascorbate biosynthesis none Nicotiana attenuata A4A49_10400 R-NAT-1126531-4 A4A49_10400 [cytosol] R-NAT-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119628 GDP-mannose metabolism none Nicotiana attenuata A4A49_10404 R-NAT-9608678-3 A4A49_10404 [cytosol] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_10404 R-NAT-8986843-3 A4A49_10404 [nucleoplasm] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_10445 R-NAT-9826680 A4A49_10445 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_10465 R-NAT-9639088-3 A4A49_10465 [plasma membrane] R-NAT-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639136 Response to Aluminum stress none Nicotiana attenuata A4A49_10493 R-NAT-9025513-2 A4A49_10493 [endoplasmic reticulum membrane] R-NAT-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119325 Sphingolipid metabolism none Nicotiana attenuata A4A49_10493 R-NAT-1129700-2 A4A49_10493 [cytosol] R-NAT-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119610 Biotin biosynthesis II none Nicotiana attenuata A4A49_10508 R-NAT-9766876 A4A49_10508 [nucleoplasm] R-NAT-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9766881 TF network involved in salinity response none Nicotiana attenuata A4A49_10508 R-NAT-9766876 A4A49_10508 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_10524 R-NAT-1250417 A4A49_10524 [cytosol] R-NAT-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119374 Abscisic acid biosynthesis none Nicotiana attenuata A4A49_10537 R-NAT-8879029-3 DREB1G [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_10537 R-NAT-8879085-3 A4A49_10537 [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_10555 R-NAT-1129187-3 A4A49_10555 [cytosol] R-NAT-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119276 Choline biosynthesis III none Nicotiana attenuata A4A49_10559 R-NAT-1127899 A4A49_10559 [cytosol] R-NAT-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119370 Sterol biosynthesis none Nicotiana attenuata A4A49_10583 R-NAT-1127373 A4A49_10583 [cytosol] R-NAT-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119297 Beta-alanine biosynthesis III none Nicotiana attenuata A4A49_10638 R-NAT-1125406-2 A4A49_10638 [cytosol] R-NAT-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119418 Suberin biosynthesis none Nicotiana attenuata A4A49_10697 R-NAT-1123337-2 A4A49_10697 [plastid stroma] R-NAT-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119509 Histidine biosynthesis I none Nicotiana attenuata A4A49_10751 R-NAT-6787262-4 A4A49_10751 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_10777 R-NAT-1128707-2 A4A49_10777 [cytosol] R-NAT-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Nicotiana attenuata A4A49_10777 R-NAT-1128707-2 A4A49_10777 [cytosol] R-NAT-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119370 Sterol biosynthesis none Nicotiana attenuata A4A49_10777 R-NAT-1128707-2 A4A49_10777 [cytosol] R-NAT-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119439 Cholesterol biosynthesis III (via desmosterol) none Nicotiana attenuata A4A49_10777 R-NAT-1128707-2 A4A49_10777 [cytosol] R-NAT-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119559 Cholesterol biosynthesis I none Nicotiana attenuata A4A49_10799 R-NAT-1129922 A4A49_10799 [plastid stroma] R-NAT-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119464 Methylerythritol phosphate pathway none Nicotiana attenuata A4A49_10861 R-NAT-9675827 A4A49_10861 [nucleoplasm] R-NAT-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675782 Maturation none Nicotiana attenuata A4A49_10861 R-NAT-9675827 A4A49_10861 [nucleoplasm] R-NAT-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675815 Leading strand synthesis none Nicotiana attenuata A4A49_10861 R-NAT-9675827 A4A49_10861 [nucleoplasm] R-NAT-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675885 Lagging strand synthesis none Nicotiana attenuata A4A49_10891 R-NAT-1123454 A4A49_10891 [chloroplast inner membrane] R-NAT-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119287 Vitamin E biosynthesis none Nicotiana attenuata A4A49_10897 R-NAT-1250417-2 A4A49_10897 [cytosol] R-NAT-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119374 Abscisic acid biosynthesis none Nicotiana attenuata A4A49_10899 R-NAT-1128857 A4A49_10899 [cytosol] R-NAT-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119609 Phaseic acid biosynthesis none Nicotiana attenuata A4A49_10935 R-NAT-8854127 A4A49_10935 [cytosol] R-NAT-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119556 Choline biosynthesis I none Nicotiana attenuata A4A49_10967 R-NAT-5632121 A4A49_10967 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_10988 R-NAT-9826696-4 A4A49_10988 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_11037 R-NAT-9930308 SNAC2 (OsNAC6) [nucleoplasm] R-NAT-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9766881 TF network involved in salinity response none Nicotiana attenuata A4A49_11084 R-NAT-1122843 A4A49_11084 [cytosol] R-NAT-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119458 Glutamate degradation none Nicotiana attenuata A4A49_11085 R-NAT-9645866 A4A49_11085 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_11085 R-NAT-9645866 A4A49_11085 [nucleoplasm] R-NAT-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675824 DNA replication Initiation none Nicotiana attenuata A4A49_11193 R-NAT-1125928 A4A49_11193 [cytosol] R-NAT-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119484 Folate polyglutamylation II none Nicotiana attenuata A4A49_11193 R-NAT-1125928 A4A49_11193 [cytosol] R-NAT-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119523 Tetrahydrofolate biosynthesis II none Nicotiana attenuata A4A49_11193 R-NAT-1125928 A4A49_11193 [cytosol] R-NAT-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119617 Folate polyglutamylation I none Nicotiana attenuata A4A49_11268 R-NAT-5225766-4 A4A49_11268 [nucleoplasm] R-NAT-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5225756 Ethylene mediated signaling none Nicotiana attenuata A4A49_11270 R-NAT-5225766-5 A4A49_11270 [nucleoplasm] R-NAT-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5225756 Ethylene mediated signaling none Nicotiana attenuata A4A49_11348 R-NAT-8879009-3 A4A49_11348 [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_11462 R-NAT-9608694-3 A4A49_11462 [cytosol] R-NAT-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9928831 Severe drought none Nicotiana attenuata A4A49_11462 R-NAT-9928774-3 A4A49_11462 [nucleoplasm] R-NAT-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9928831 Severe drought none Nicotiana attenuata A4A49_11525 R-NAT-6788065 A4A49_11525 [nucleoplasm] R-NAT-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6788019 Salicylic acid signaling none Nicotiana attenuata A4A49_11573 R-NAT-1129187-2 A4A49_11573 [cytosol] R-NAT-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119276 Choline biosynthesis III none Nicotiana attenuata A4A49_11595 R-NAT-9658611-2 A4A49_11595 [plastid stroma] R-NAT-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119263 Arginine biosynthesis none Nicotiana attenuata A4A49_11595 R-NAT-9658611-2 A4A49_11595 [plastid stroma] R-NAT-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119539 Ornithine biosynthesis none Nicotiana attenuata A4A49_11595 R-NAT-9658611-2 A4A49_11595 [plastid stroma] R-NAT-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119622 Arginine biosynthesis II (acetyl cycle) none Nicotiana attenuata A4A49_11626 R-NAT-1126488 A4A49_11626 [mitochondrial inner membrane] R-NAT-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119402 Phospholipid biosynthesis I none Nicotiana attenuata A4A49_11639 R-NAT-5632334-2 A4A49_11639 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_11639 R-NAT-5632197-2 phospho-A4A49_11639 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_11639 R-NAT-5632183-2 phospho-A4A49_11639 [cytosol] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_11639 R-NAT-5632334-2 A4A49_11639 [nucleoplasm] R-NAT-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5679411 Gibberellin signaling none Nicotiana attenuata A4A49_11665 R-NAT-1128298 A4A49_11665 [cytosol] R-NAT-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119271 Threonine degradation none Nicotiana attenuata A4A49_11665 R-NAT-1128298 A4A49_11665 [cytosol] R-NAT-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119610 Biotin biosynthesis II none Nicotiana attenuata A4A49_11666 R-NAT-1128298-2 A4A49_11666 [cytosol] R-NAT-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119271 Threonine degradation none Nicotiana attenuata A4A49_11666 R-NAT-1128298-2 A4A49_11666 [cytosol] R-NAT-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119610 Biotin biosynthesis II none Nicotiana attenuata A4A49_11672 R-NAT-4788601-2 A4A49_11672 [plastid stroma] R-NAT-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119509 Histidine biosynthesis I none Nicotiana attenuata A4A49_11680 R-NAT-1126671 A4A49_11680 [cytosol] R-NAT-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119534 Pyridoxal 5'-phosphate salvage pathway none Nicotiana attenuata A4A49_11680 R-NAT-1126671 A4A49_11680 [cytosol] R-NAT-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119594 Pyridoxal 5'-phosphate biosynthesis none Nicotiana attenuata A4A49_11732 R-NAT-9025372 A4A49_11732 [endoplasmic reticulum membrane] R-NAT-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119402 Phospholipid biosynthesis I none Nicotiana attenuata A4A49_11776 R-NAT-9684723 A4A49_11776 [cytosol] R-NAT-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9609102 Flower development none Nicotiana attenuata A4A49_11802 R-NAT-9025819-2 A4A49_11802 [plasma membrane] R-NAT-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9025727 Iron uptake and transport in root vascular system none Nicotiana attenuata A4A49_11811 R-NAT-9639088-2 A4A49_11811 [plasma membrane] R-NAT-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639136 Response to Aluminum stress none Nicotiana attenuata A4A49_11892 R-NAT-9639010 A4A49_11892 [cytosol] R-NAT-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119434 Phytic acid biosynthesis (lipid-independent) none Nicotiana attenuata A4A49_11916 R-NAT-8868866-2 A4A49_11916 [endoplasmic reticulum membrane] R-NAT-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8868949 Intracellular auxin transport none Nicotiana attenuata A4A49_11967 R-NAT-9607105 A4A49_11967 [mitochondrion] R-NAT-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9607185 Generation of superoxide radicals none Nicotiana attenuata A4A49_11991 R-NAT-1129851 A4A49_11991 [mitochondrial matrix] R-NAT-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119533 TCA cycle (plant) none Nicotiana attenuata A4A49_11991 R-NAT-1129851 A4A49_11991 [mitochondrial matrix] R-NAT-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119540 Leucine biosynthesis none Nicotiana attenuata A4A49_11994 R-NAT-9640704 A4A49_11994 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_11994 R-NAT-9640704 A4A49_11994 [nucleoplasm] R-NAT-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675824 DNA replication Initiation none Nicotiana attenuata A4A49_12054 R-NAT-1129485 A4A49_12054 [cytosol] R-NAT-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119341 Galactosylcyclitol biosynthesis none Nicotiana attenuata A4A49_12091 R-NAT-1122347 A4A49_12091 [cytosol] R-NAT-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119384 NAD biosynthesis I (from aspartate) none Nicotiana attenuata A4A49_12116 R-NAT-5367761 A4A49_12116 [plastid stroma] R-NAT-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5367729 Strigolactone biosynthesis none Nicotiana attenuata A4A49_12150 R-NAT-1126034-2 A4A49_12150 [cytosol] R-NAT-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119534 Pyridoxal 5'-phosphate salvage pathway none Nicotiana attenuata A4A49_12150 R-NAT-1126034-2 A4A49_12150 [cytosol] R-NAT-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119594 Pyridoxal 5'-phosphate biosynthesis none Nicotiana attenuata A4A49_12178 R-NAT-6788234 A4A49_12178 [cytosol] R-NAT-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6788019 Salicylic acid signaling none Nicotiana attenuata A4A49_12178 R-NAT-1124041 A4A49_12178 [nucleoplasm] R-NAT-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6788019 Salicylic acid signaling none Nicotiana attenuata A4A49_12202 R-NAT-1126828 A4A49_12202 [plastid] R-NAT-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119403 Removal of superoxide radicals none Nicotiana attenuata A4A49_12204 R-NAT-5149657 A4A49_12204 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_12204 R-NAT-1129239 A4A49_12204 [cytosol] R-NAT-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119570 Cytosolic glycolysis none Nicotiana attenuata A4A49_12224 R-NAT-1124285-2 A4A49_12224 [cytosol] R-NAT-1119284 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119284 Coumarin biosynthesis (via 2-coumarate) none Nicotiana attenuata A4A49_12233 R-NAT-1125906-2 A4A49_12233 [cytosol] R-NAT-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119276 Choline biosynthesis III none Nicotiana attenuata A4A49_12259 R-NAT-8879029-7 DREB1G [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_12259 R-NAT-8879085-7 A4A49_12259 [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_12259 R-NAT-8879050-4 CBF1 homolog [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_12287 R-NAT-9930304-2 ACA7 [plasma membrane] R-NAT-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9766881 TF network involved in salinity response none Nicotiana attenuata A4A49_12297 R-NAT-1129311 A4A49_12297 [cytosol] R-NAT-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Nicotiana attenuata A4A49_12322 R-NAT-1129934 A4A49_12322 [plastid stroma] R-NAT-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119430 Chorismate biosynthesis none Nicotiana attenuata A4A49_12364 R-NAT-1126157 A4A49_12364 [cytosol] R-NAT-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119460 Isoleucine biosynthesis from threonine none Nicotiana attenuata A4A49_12364 R-NAT-1126157 A4A49_12364 [cytosol] R-NAT-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119600 Valine biosynthesis none Nicotiana attenuata A4A49_12368 R-NAT-1124520 A4A49_12368 [cytosol] R-NAT-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119278 PRPP biosynthesis I none Nicotiana attenuata A4A49_12384 R-NAT-1123161-2 A4A49_12384 [chloroplast] R-NAT-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119494 Tryptophan biosynthesis none Nicotiana attenuata A4A49_12440 R-NAT-1124334 A4A49_12440 [plasma membrane] R-NAT-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119314 Cellulose biosynthesis none Nicotiana attenuata A4A49_12456 R-NAT-1125259 A4A49_12456 [cytosol] R-NAT-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119428 GDP-D-rhamnose biosynthesis none Nicotiana attenuata A4A49_12456 R-NAT-1125259 A4A49_12456 [cytosol] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_12461 R-NAT-1130181 A4A49_12461 [plastid stroma] R-NAT-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119430 Chorismate biosynthesis none Nicotiana attenuata A4A49_12505 R-NAT-9658702 A4A49_12505 [plastid stroma] R-NAT-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119297 Beta-alanine biosynthesis III none Nicotiana attenuata A4A49_12520 R-NAT-9681886-2 A4A49_12520 [cytosol] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_12558 R-NAT-1126320-2 A4A49_12558 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_12661 R-NAT-9636827 A4A49_12661 [nucleoplasm] R-NAT-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9766881 TF network involved in salinity response none Nicotiana attenuata A4A49_12672 R-NAT-5632129 A4A49_12672 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_12685 R-NAT-9645891 A4A49_12685 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_12704 R-NAT-9025739 A4A49_12704 [plasma membrane] R-NAT-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9025727 Iron uptake and transport in root vascular system none Nicotiana attenuata A4A49_12704 R-NAT-9025739 A4A49_12704 [plasma membrane] R-NAT-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9618218 Arsenic uptake and detoxification none Nicotiana attenuata A4A49_12704 R-NAT-9025739 A4A49_12704 [plasma membrane] R-NAT-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639136 Response to Aluminum stress none Nicotiana attenuata A4A49_12742 R-NAT-9611889-3 A4A49_12742 [mitochondrial matrix] R-NAT-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119479 Valine degradation none Nicotiana attenuata A4A49_12750 R-NAT-1128707 A4A49_12750 [cytosol] R-NAT-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Nicotiana attenuata A4A49_12750 R-NAT-1128707 A4A49_12750 [cytosol] R-NAT-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119370 Sterol biosynthesis none Nicotiana attenuata A4A49_12750 R-NAT-1128707 A4A49_12750 [cytosol] R-NAT-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119439 Cholesterol biosynthesis III (via desmosterol) none Nicotiana attenuata A4A49_12750 R-NAT-1128707 A4A49_12750 [cytosol] R-NAT-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119559 Cholesterol biosynthesis I none Nicotiana attenuata A4A49_12829 R-NAT-9645954 A4A49_12829 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_12874 R-NAT-4415101 A4A49_12874 [cytosol] R-NAT-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-3899351 Abscisic acid (ABA) mediated signaling none Nicotiana attenuata A4A49_12874 R-NAT-4415101 A4A49_12874 [cytosol] R-NAT-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639861 Development of root hair none Nicotiana attenuata A4A49_12909 R-NAT-6787262 A4A49_12909 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_12969 R-NAT-9611544-2 SPL11 [nucleoplasm] R-NAT-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9611432 Recognition of fungal and bacterial pathogens and immunity response none Nicotiana attenuata A4A49_12969 R-NAT-9611440-2 phospho-phosphorylated-SPL11 [nucleoplasm] R-NAT-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9611432 Recognition of fungal and bacterial pathogens and immunity response none Nicotiana attenuata A4A49_12972 R-NAT-1129811 A4A49_12972 [mitochondrion] R-NAT-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119403 Removal of superoxide radicals none Nicotiana attenuata A4A49_13004 R-NAT-9675426 A4A49_13004 [nucleoplasm] R-NAT-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030654 Primary root development none Nicotiana attenuata A4A49_13008 R-NAT-5632334-3 A4A49_13008 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_13008 R-NAT-5632197-3 phospho-A4A49_13008 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_13008 R-NAT-5632183-3 phospho-A4A49_13008 [cytosol] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_13008 R-NAT-5632334-3 A4A49_13008 [nucleoplasm] R-NAT-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5679411 Gibberellin signaling none Nicotiana attenuata A4A49_13034 R-NAT-2731026 A4A49_13034 [endoplasmic reticulum membrane] R-NAT-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119557 GA12 biosynthesis none Nicotiana attenuata A4A49_13042 R-NAT-9608930 A4A49_13042 [nucleoplasm] R-NAT-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8934036 Long day regulated expression of florigens none Nicotiana attenuata A4A49_13077 R-NAT-9639789-2 A4A49_13077 [plasma membrane] R-NAT-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639861 Development of root hair none Nicotiana attenuata A4A49_13081 R-NAT-9675391-3 A4A49_13081 [nucleoplasm] R-NAT-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675508 Root elongation none Nicotiana attenuata A4A49_13095 R-NAT-9658573 A4A49_13095 [endoplasmic reticulum lumen] R-NAT-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119502 Allantoin degradation none Nicotiana attenuata A4A49_13110 R-NAT-1122832 A4A49_13110 [plastid stroma] R-NAT-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119449 Carotenoid biosynthesis none Nicotiana attenuata A4A49_13130 R-NAT-5679398-3 A4A49_13130 [cytosol] R-NAT-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5679411 Gibberellin signaling none Nicotiana attenuata A4A49_13138 R-NAT-1127922 A4A49_13138 [cytosol] R-NAT-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119370 Sterol biosynthesis none Nicotiana attenuata A4A49_13164 R-NAT-1126238-2 A4A49_13164 [chloroplast] R-NAT-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119494 Tryptophan biosynthesis none Nicotiana attenuata A4A49_13257 R-NAT-1126916 A4A49_13257 [plastid stroma] R-NAT-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119464 Methylerythritol phosphate pathway none Nicotiana attenuata A4A49_13261 R-NAT-1123210-2 A4A49_13261 [cytosol] R-NAT-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119516 Trehalose biosynthesis I none Nicotiana attenuata A4A49_13280 R-NAT-1128071-2 A4A49_13280 [mitochondrial matrix] R-NAT-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119533 TCA cycle (plant) none Nicotiana attenuata A4A49_13292 R-NAT-9826597 A4A49_13292 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_13293 R-NAT-9640777-2 A4A49_13293 [nucleoplasm] R-NAT-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640760 G1 phase none Nicotiana attenuata A4A49_13293 R-NAT-9640777-2 A4A49_13293 [nucleoplasm] R-NAT-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640887 G1/S transition none Nicotiana attenuata A4A49_13310 R-NAT-8858063 A4A49_13310 [plasma membrane] R-NAT-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8858053 Polar auxin transport none Nicotiana attenuata A4A49_13334 R-NAT-9025699 A4A49_13334 [plasma membrane] R-NAT-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8858053 Polar auxin transport none Nicotiana attenuata A4A49_13334 R-NAT-9025699 A4A49_13334 [plasma membrane] R-NAT-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9025727 Iron uptake and transport in root vascular system none Nicotiana attenuata A4A49_13396 R-NAT-1129466 A4A49_13396 [cytosol] R-NAT-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119449 Carotenoid biosynthesis none Nicotiana attenuata A4A49_13401 R-NAT-9675274 A4A49_13401 [nucleoplasm] R-NAT-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030654 Primary root development none Nicotiana attenuata A4A49_13450 R-NAT-4827046 A4A49_13450 [plastid stroma] R-NAT-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-4827054 Tetrapyrrole biosynthesis I none Nicotiana attenuata A4A49_13454 R-NAT-1128319-2 A4A49_13454 [cytosol] R-NAT-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119341 Galactosylcyclitol biosynthesis none Nicotiana attenuata A4A49_13461 R-NAT-1127815-2 A4A49_13461 [cytosol] R-NAT-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119450 Homocysteine biosynthesis none Nicotiana attenuata A4A49_13660 R-NAT-1122827 A4A49_13660 [cytosol] R-NAT-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119334 Ethylene biosynthesis from methionine none Nicotiana attenuata A4A49_13682 R-NAT-1129629 A4A49_13682 [plastid stroma] R-NAT-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119293 Glutamine biosynthesis I none Nicotiana attenuata A4A49_13682 R-NAT-1129629 A4A49_13682 [plastid stroma] R-NAT-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119443 Ammonia assimilation cycle none Nicotiana attenuata A4A49_13719 R-NAT-9675857 A4A49_13719 [nucleoplasm] R-NAT-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675782 Maturation none Nicotiana attenuata A4A49_13737 R-NAT-1125910 A4A49_13737 [plastid stroma] R-NAT-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119367 Polyisoprenoid biosynthesis none Nicotiana attenuata A4A49_13751 R-NAT-1126888 A4A49_13751 [cytosol] R-NAT-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119360 Fructan biosynthesis none Nicotiana attenuata A4A49_13777 R-NAT-9645950 A4A49_13777 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_13777 R-NAT-9645950 A4A49_13777 [nucleoplasm] R-NAT-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675782 Maturation none Nicotiana attenuata A4A49_13777 R-NAT-9645950 A4A49_13777 [nucleoplasm] R-NAT-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675815 Leading strand synthesis none Nicotiana attenuata A4A49_13777 R-NAT-9645950 A4A49_13777 [nucleoplasm] R-NAT-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675824 DNA replication Initiation none Nicotiana attenuata A4A49_13777 R-NAT-9645950 A4A49_13777 [nucleoplasm] R-NAT-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675885 Lagging strand synthesis none Nicotiana attenuata A4A49_13866 R-NAT-1124269-2 A4A49_13866 [cytosol] R-NAT-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119456 Brassinosteroid biosynthesis II none Nicotiana attenuata A4A49_13930 R-NAT-8933784 A4A49_13930 [nucleoplasm] R-NAT-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8933811 Circadian rhythm none Nicotiana attenuata A4A49_14108 R-NAT-9826692-2 A4A49_14108 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_14191 R-NAT-1129539 A4A49_14191 [cytosol] R-NAT-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119610 Biotin biosynthesis II none Nicotiana attenuata A4A49_14257 R-NAT-1128327 A4A49_14257 [cytosol] R-NAT-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119267 Phenylalanine degradation III none Nicotiana attenuata A4A49_14366 R-NAT-1129175 A4A49_14366 [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_14374 R-NAT-8933728-4 A4A49_14374 [nucleoplasm] R-NAT-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8933811 Circadian rhythm none Nicotiana attenuata A4A49_14386 R-NAT-9918210 granule-bound starch synthase 1 (GBSSI, or Waxy) [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_14386 R-NAT-9918222 A4A49_14386 [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_14386 R-NAT-9626344 A4A49_14386 [plastid stroma] R-NAT-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9626305 Regulatory network of nutrient accumulation none Nicotiana attenuata A4A49_14397 R-NAT-9025487-2 A4A49_14397 [cytosol] R-NAT-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119325 Sphingolipid metabolism none Nicotiana attenuata A4A49_14447 R-NAT-5655076-2 A4A49_14447 [Golgi lumen] R-NAT-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5655101 Xyloglucan biosynthesis none Nicotiana attenuata A4A49_14453 R-NAT-9826620 HOX12/ OsGT1 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_14453 R-NAT-9826620 HOX12/ OsGT1 [nucleoplasm] R-NAT-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Nicotiana attenuata A4A49_14459 R-NAT-9826682-2 A4A49_14459 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_14463 R-NAT-9645944 A4A49_14463 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_14481 R-NAT-1125489-2 A4A49_14481 [Golgi membrane] R-NAT-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119428 GDP-D-rhamnose biosynthesis none Nicotiana attenuata A4A49_14481 R-NAT-1127743-2 A4A49_14481 [cytosol] R-NAT-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119428 GDP-D-rhamnose biosynthesis none Nicotiana attenuata A4A49_14481 R-NAT-1125489-2 A4A49_14481 [Golgi membrane] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_14481 R-NAT-1125489-2 A4A49_14481 [Golgi membrane] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_14481 R-NAT-1127743-2 A4A49_14481 [cytosol] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_14519 R-NAT-9924407-9 EXPB5 [basolateral plasma membrane] R-NAT-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924451 Shoot (tiller) formation and regulation of tiller angle none Nicotiana attenuata A4A49_14591 R-NAT-5603891 A4A49_14591 [plastid stroma] R-NAT-1119420 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119420 Glutamate biosynthesis V none Nicotiana attenuata A4A49_14591 R-NAT-1125410 A4A49_14591 [chloroplast stroma] R-NAT-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119443 Ammonia assimilation cycle none Nicotiana attenuata A4A49_14598 R-NAT-5225766-3 A4A49_14598 [nucleoplasm] R-NAT-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5225756 Ethylene mediated signaling none Nicotiana attenuata A4A49_14707 R-NAT-1129926 A4A49_14707 [cytosol] R-NAT-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Nicotiana attenuata A4A49_14738 R-NAT-4415101-4 A4A49_14738 [cytosol] R-NAT-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-3899351 Abscisic acid (ABA) mediated signaling none Nicotiana attenuata A4A49_14738 R-NAT-4415101-4 A4A49_14738 [cytosol] R-NAT-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639861 Development of root hair none Nicotiana attenuata A4A49_14758 R-NAT-6787066-3 A4A49_14758 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_14815 R-NAT-3230566 A4A49_14815 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_14853 R-NAT-6787181-2 A4A49_14853 [cytosol] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_14854 R-NAT-1129571 A4A49_14854 [mitochondrion] R-NAT-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119365 Lysine degradation II none Nicotiana attenuata A4A49_14878 R-NAT-6787262-2 A4A49_14878 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_14887 R-NAT-1122656 A4A49_14887 [endosome] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_14887 R-NAT-5679312 A4A49_14887 [plasma membrane] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_15038 R-NAT-9639874 A4A49_15038 [plasma membrane] R-NAT-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639861 Development of root hair none Nicotiana attenuata A4A49_15089 R-NAT-9826639-2 A4A49_15089 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_15155 R-NAT-1124809 A4A49_15155 [cytosol] R-NAT-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119486 IAA biosynthesis I none Nicotiana attenuata A4A49_15187 R-NAT-1124861 A4A49_15187 [plastid stroma] R-NAT-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119449 Carotenoid biosynthesis none Nicotiana attenuata A4A49_15189 R-NAT-1128815 A4A49_15189 [cytosol] R-NAT-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119452 Galactose degradation II none Nicotiana attenuata A4A49_15189 R-NAT-1128815 A4A49_15189 [cytosol] R-NAT-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119465 Sucrose biosynthesis none Nicotiana attenuata A4A49_15235 R-NAT-1125406-4 A4A49_15235 [cytosol] R-NAT-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119418 Suberin biosynthesis none Nicotiana attenuata A4A49_15276 R-NAT-9826597-2 A4A49_15276 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_15285 R-NAT-9675423 A4A49_15285 [nucleoplasm] R-NAT-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675508 Root elongation none Nicotiana attenuata A4A49_15285 R-NAT-9930290 MPK5 [nucleoplasm] R-NAT-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9766881 TF network involved in salinity response none Nicotiana attenuata A4A49_15331 R-NAT-1123596 A4A49_15331 [plastid stroma] R-NAT-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119509 Histidine biosynthesis I none Nicotiana attenuata A4A49_15342 R-NAT-1123210 A4A49_15342 [cytosol] R-NAT-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119516 Trehalose biosynthesis I none Nicotiana attenuata A4A49_15373 R-NAT-8933833 A4A49_15373 [nucleoplasm] R-NAT-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8933811 Circadian rhythm none Nicotiana attenuata A4A49_15373 R-NAT-8933833 A4A49_15373 [nucleoplasm] R-NAT-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9928995 Drought escape (DE) via ABA-dependent pathway none Nicotiana attenuata A4A49_15381 R-NAT-1126091 A4A49_15381 [cytosol] R-NAT-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119394 Pantothenate and coenzyme A biosynthesis III none Nicotiana attenuata A4A49_15381 R-NAT-1126091 A4A49_15381 [cytosol] R-NAT-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119496 Pantothenate biosynthesis I none Nicotiana attenuata A4A49_15381 R-NAT-1126091 A4A49_15381 [cytosol] R-NAT-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119544 Pantothenate biosynthesis II none Nicotiana attenuata A4A49_15381 R-NAT-1126091 A4A49_15381 [cytosol] R-NAT-1119568 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119568 Pantothenate biosynthesis III none Nicotiana attenuata A4A49_15420 R-NAT-9035614-2 A4A49_15420 [cytosol] R-NAT-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9035605 Regulation of seed size none Nicotiana attenuata A4A49_15420 R-NAT-9035651-2 A4A49_15420 [nucleoplasm] R-NAT-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9035605 Regulation of seed size none Nicotiana attenuata A4A49_15438 R-NAT-9607102 A4A49_15438 [mitochondrion] R-NAT-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9607185 Generation of superoxide radicals none Nicotiana attenuata A4A49_15458 R-NAT-5138505 A4A49_15458 [plastid stroma] R-NAT-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119263 Arginine biosynthesis none Nicotiana attenuata A4A49_15458 R-NAT-5138505 A4A49_15458 [plastid stroma] R-NAT-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119539 Ornithine biosynthesis none Nicotiana attenuata A4A49_15458 R-NAT-5138505 A4A49_15458 [plastid stroma] R-NAT-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119622 Arginine biosynthesis II (acetyl cycle) none Nicotiana attenuata A4A49_15479 R-NAT-9035593-2 A4A49_15479 [cytosol] R-NAT-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9035605 Regulation of seed size none Nicotiana attenuata A4A49_15479 R-NAT-9035634-2 A4A49_15479 [nucleoplasm] R-NAT-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9035605 Regulation of seed size none Nicotiana attenuata A4A49_15479 R-NAT-9035593-2 A4A49_15479 [cytosol] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_15479 R-NAT-9035634-2 A4A49_15479 [nucleoplasm] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_15623 R-NAT-9640753 A4A49_15623 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_15623 R-NAT-9640753 A4A49_15623 [nucleoplasm] R-NAT-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675824 DNA replication Initiation none Nicotiana attenuata A4A49_15651 R-NAT-1129896 A4A49_15651 [mitochondrial matrix] R-NAT-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119533 TCA cycle (plant) none Nicotiana attenuata A4A49_15666 R-NAT-5632319-2 phospho-A4A49_15666 [plasma membrane] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_15672 R-NAT-6787066 A4A49_15672 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_15694 R-NAT-1128989-2 A4A49_15694 [plastid stroma] R-NAT-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119509 Histidine biosynthesis I none Nicotiana attenuata A4A49_15729 R-NAT-9826691-2 A4A49_15729 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_15788 R-NAT-5632319 phospho-A4A49_15788 [plasma membrane] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_15798 R-NAT-1128632-3 A4A49_15798 [cytosol] R-NAT-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119465 Sucrose biosynthesis none Nicotiana attenuata A4A49_15798 R-NAT-1128632-3 A4A49_15798 [cytosol] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_15800 R-NAT-9918159 A4A49_15800 [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_15909 R-NAT-9026148-3 A4A49_15909 [mitochondrion] R-NAT-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119458 Glutamate degradation none Nicotiana attenuata A4A49_15909 R-NAT-1130288-3 A4A49_15909 [cytosol] R-NAT-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119610 Biotin biosynthesis II none Nicotiana attenuata A4A49_15911 R-NAT-5679502 A4A49_15911 [plastid stroma] R-NAT-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5367729 Strigolactone biosynthesis none Nicotiana attenuata A4A49_15957 R-NAT-8868961-2 A4A49_15957 [plant-type vacuole membrane] R-NAT-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8868949 Intracellular auxin transport none Nicotiana attenuata A4A49_15987 R-NAT-1128594-2 A4A49_15987 [cytosol] R-NAT-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119349 S-methylmethionine cycle none Nicotiana attenuata A4A49_15987 R-NAT-1128594-2 A4A49_15987 [cytosol] R-NAT-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119400 Methionine biosynthesis II none Nicotiana attenuata A4A49_16042 R-NAT-1125877 A4A49_16042 [cytosol] R-NAT-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119456 Brassinosteroid biosynthesis II none Nicotiana attenuata A4A49_16055 R-NAT-4415007-3 A4A49_16055 [cytosol] R-NAT-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-3899351 Abscisic acid (ABA) mediated signaling none Nicotiana attenuata A4A49_16055 R-NAT-4415016-3 phospho-A4A49_16055 [cytosol] R-NAT-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-3899351 Abscisic acid (ABA) mediated signaling none Nicotiana attenuata A4A49_16055 R-NAT-4415007-3 A4A49_16055 [cytosol] R-NAT-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639861 Development of root hair none Nicotiana attenuata A4A49_16061 R-NAT-5632199-2 A4A49_16061 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_16071 R-NAT-5654755 A4A49_16071 [cytosol] R-NAT-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119393 Asparagine degradation I none Nicotiana attenuata A4A49_16107 R-NAT-1130059-2 A4A49_16107 [cytosol] R-NAT-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119262 Threonine biosynthesis from homoserine none Nicotiana attenuata A4A49_16142 R-NAT-1122881 A4A49_16142 [cytosol] R-NAT-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Nicotiana attenuata A4A49_16142 R-NAT-1122881 A4A49_16142 [cytosol] R-NAT-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119438 Secologanin and strictosidine biosynthesis none Nicotiana attenuata A4A49_16142 R-NAT-1122881 A4A49_16142 [cytosol] R-NAT-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119486 IAA biosynthesis I none Nicotiana attenuata A4A49_16149 R-NAT-5655057 A4A49_16149 [Golgi lumen] R-NAT-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5655101 Xyloglucan biosynthesis none Nicotiana attenuata A4A49_16156 R-NAT-1122974 A4A49_16156 [mitochondrial matrix] R-NAT-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119479 Valine degradation none Nicotiana attenuata A4A49_16211 R-NAT-9611549 phospho-phosphorylated-CERK1 [plasma membrane] R-NAT-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9611432 Recognition of fungal and bacterial pathogens and immunity response none Nicotiana attenuata A4A49_16301 R-NAT-1129781 A4A49_16301 [chloroplast] R-NAT-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119494 Tryptophan biosynthesis none Nicotiana attenuata A4A49_16322 R-NAT-1122936 A4A49_16322 [cytosol] R-NAT-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119452 Galactose degradation II none Nicotiana attenuata A4A49_16340 R-NAT-1128877-2 A4A49_16340 [plastid stroma] R-NAT-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119424 Plastid glycolysis none Nicotiana attenuata A4A49_16340 R-NAT-1128877-2 A4A49_16340 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_16351 R-NAT-1127625 A4A49_16351 [cytosol] R-NAT-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119265 Tetrahydrofolate biosynthesis I none Nicotiana attenuata A4A49_16351 R-NAT-1127625 A4A49_16351 [cytosol] R-NAT-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119523 Tetrahydrofolate biosynthesis II none Nicotiana attenuata A4A49_16360 R-NAT-5608102 A4A49_16360 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_16360 R-NAT-1123690 A4A49_16360 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_16384 R-NAT-8987460 A4A49_16384 [chloroplast] R-NAT-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119312 Photorespiration none Nicotiana attenuata A4A49_16429 R-NAT-6787119-2 A4A49_16429 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_16490 R-NAT-9826705 OSH71 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_16492 R-NAT-9025712-2 A4A49_16492 [cytosol] R-NAT-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9025754 Mugineic acid biosynthesis none Nicotiana attenuata A4A49_16534 R-NAT-9681885-2 A4A49_16534 [Golgi membrane] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_16562 R-NAT-5149678-2 A4A49_16562 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_16588 R-NAT-5683263 A4A49_16588 [cytosol] R-NAT-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119586 Cyanate degradation none Nicotiana attenuata A4A49_16598 R-NAT-1126998-2 A4A49_16598 [cytosol] R-NAT-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119615 Mevalonate pathway none Nicotiana attenuata A4A49_16654 R-NAT-1126875 A4A49_16654 [cytosol] R-NAT-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119486 IAA biosynthesis I none Nicotiana attenuata A4A49_16694 R-NAT-9826652 OSH15 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_16694 R-NAT-9631619 A4A49_16694 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_16701 R-NAT-9611863-2 A4A49_16701 [mitochondrial matrix] R-NAT-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119479 Valine degradation none Nicotiana attenuata A4A49_16766 R-NAT-9918264 ISA3 [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_16779 R-NAT-9025819-3 A4A49_16779 [plasma membrane] R-NAT-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9025727 Iron uptake and transport in root vascular system none Nicotiana attenuata A4A49_16794 R-NAT-1130235-3 A4A49_16794 [cytosol] R-NAT-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119261 Salicylate biosynthesis none Nicotiana attenuata A4A49_16794 R-NAT-1130235-3 A4A49_16794 [cytosol] R-NAT-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119418 Suberin biosynthesis none Nicotiana attenuata A4A49_16794 R-NAT-1130235-3 A4A49_16794 [cytosol] R-NAT-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119582 Phenylpropanoid biosynthesis, initial reactions none Nicotiana attenuata A4A49_16800 R-NAT-6787113 A4A49_16800 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_16810 R-NAT-4754219 A4A49_16810 [plastid stroma] R-NAT-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119449 Carotenoid biosynthesis none Nicotiana attenuata A4A49_16817 R-NAT-1122261 A4A49_16817 [plastid stroma] R-NAT-1119602 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119602 Phytyl-PP biosynthesis none Nicotiana attenuata A4A49_16817 R-NAT-1122261 A4A49_16817 [plastid stroma] R-NAT-1119605 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119605 Chlorophyll a biosynthesis II none Nicotiana attenuata A4A49_16884 R-NAT-1127733 A4A49_16884 [cytosol] R-NAT-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119460 Isoleucine biosynthesis from threonine none Nicotiana attenuata A4A49_16884 R-NAT-1127733 A4A49_16884 [cytosol] R-NAT-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119600 Valine biosynthesis none Nicotiana attenuata A4A49_16893 R-NAT-1124067 A4A49_16893 [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_16893 R-NAT-9626520 A4A49_16893 [plastid stroma] R-NAT-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9626305 Regulatory network of nutrient accumulation none Nicotiana attenuata A4A49_16895 R-NAT-8854108 A4A49_16895 [cytosol] R-NAT-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119556 Choline biosynthesis I none Nicotiana attenuata A4A49_16932 R-NAT-1123757-5 A4A49_16932 [cytosol] R-NAT-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119460 Isoleucine biosynthesis from threonine none Nicotiana attenuata A4A49_16932 R-NAT-1123757-5 A4A49_16932 [cytosol] R-NAT-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119473 Cytokinins-O-glucoside biosynthesis none Nicotiana attenuata A4A49_16932 R-NAT-1123757-5 A4A49_16932 [cytosol] R-NAT-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119496 Pantothenate biosynthesis I none Nicotiana attenuata A4A49_16932 R-NAT-1123757-5 A4A49_16932 [cytosol] R-NAT-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119540 Leucine biosynthesis none Nicotiana attenuata A4A49_16932 R-NAT-1123757-5 A4A49_16932 [cytosol] R-NAT-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119544 Pantothenate biosynthesis II none Nicotiana attenuata A4A49_16933 R-NAT-5632199 A4A49_16933 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_16982 R-NAT-5221144 A4A49_16982 [plastid] R-NAT-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119374 Abscisic acid biosynthesis none Nicotiana attenuata A4A49_17014 R-NAT-9618197-4 A4A49_17014 [plasma membrane] R-NAT-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9618218 Arsenic uptake and detoxification none Nicotiana attenuata A4A49_17048 R-NAT-8879061 LOS2 homolog [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_17048 R-NAT-8878987 A4A49_17048 [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_17109 R-NAT-9611465 A4A49_17109 [nucleoplasm] R-NAT-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9611432 Recognition of fungal and bacterial pathogens and immunity response none Nicotiana attenuata A4A49_17109 R-NAT-9611445 A4A49_17109 [nucleoplasm] R-NAT-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9611432 Recognition of fungal and bacterial pathogens and immunity response none Nicotiana attenuata A4A49_17150 R-NAT-5149644 A4A49_17150 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_17200 R-NAT-1124496-2 A4A49_17200 [cytosol] R-NAT-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119615 Mevalonate pathway none Nicotiana attenuata A4A49_17209 R-NAT-9684723-2 A4A49_17209 [cytosol] R-NAT-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9609102 Flower development none Nicotiana attenuata A4A49_17250 R-NAT-1128950 A4A49_17250 [cytosol] R-NAT-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119379 Flavin biosynthesis none Nicotiana attenuata A4A49_17259 R-NAT-5608161-4 A4A49_17259 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_17268 R-NAT-6787093-5 A4A49_17268 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_17294 R-NAT-1126436-2 A4A49_17294 [cytosol] R-NAT-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119615 Mevalonate pathway none Nicotiana attenuata A4A49_17366 R-NAT-1123059 A4A49_17366 [cytosol] R-NAT-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119317 Spermine biosynthesis none Nicotiana attenuata A4A49_17366 R-NAT-1123059 A4A49_17366 [cytosol] R-NAT-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119343 Spermidine biosynthesis none Nicotiana attenuata A4A49_17396 R-NAT-1124285 A4A49_17396 [cytosol] R-NAT-1119284 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119284 Coumarin biosynthesis (via 2-coumarate) none Nicotiana attenuata A4A49_17444 R-NAT-9639111 A4A49_17444 [plasma membrane] R-NAT-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639136 Response to Aluminum stress none Nicotiana attenuata A4A49_17504 R-NAT-1127597-2 A4A49_17504 [cytosol] R-NAT-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119615 Mevalonate pathway none Nicotiana attenuata A4A49_17558 R-NAT-1128334 A4A49_17558 [mitochondrial matrix] R-NAT-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119337 Proline degradation none Nicotiana attenuata A4A49_17569 R-NAT-1124861-2 A4A49_17569 [plastid stroma] R-NAT-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119449 Carotenoid biosynthesis none Nicotiana attenuata A4A49_17628 R-NAT-9612399 A4A49_17628 [peroxisomal matrix] R-NAT-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119612 Cysteine degradation none Nicotiana attenuata A4A49_17628 R-NAT-9612380 A4A49_17628 [cytosol] R-NAT-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119612 Cysteine degradation none Nicotiana attenuata A4A49_17634 R-NAT-1250418 A4A49_17634 [cytosol] R-NAT-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119374 Abscisic acid biosynthesis none Nicotiana attenuata A4A49_17634 R-NAT-1129637-2 A4A49_17634 [cytosol] R-NAT-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119486 IAA biosynthesis I none Nicotiana attenuata A4A49_17644 R-NAT-9930197-2 MPK8 [nucleoplasm] R-NAT-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9766881 TF network involved in salinity response none Nicotiana attenuata A4A49_17768 R-NAT-9639016 A4A49_17768 [cytosol] R-NAT-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119410 Ascorbate biosynthesis none Nicotiana attenuata A4A49_17768 R-NAT-9639016 A4A49_17768 [cytosol] R-NAT-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119434 Phytic acid biosynthesis (lipid-independent) none Nicotiana attenuata A4A49_17771 R-NAT-1125399 A4A49_17771 [plastid] R-NAT-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119403 Removal of superoxide radicals none Nicotiana attenuata A4A49_17796 R-NAT-1126165-4 A4A49_17796 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_17796 R-NAT-5608120-4 A4A49_17796 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_17817 R-NAT-9681886-3 A4A49_17817 [cytosol] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_17854 R-NAT-1125832 A4A49_17854 [plastid stroma] R-NAT-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119430 Chorismate biosynthesis none Nicotiana attenuata A4A49_17859 R-NAT-1123042-2 A4A49_17859 R-NAT-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119400 Methionine biosynthesis II none Nicotiana attenuata A4A49_17888 R-NAT-5138489 A4A49_17888 [plastid stroma] R-NAT-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119263 Arginine biosynthesis none Nicotiana attenuata A4A49_17888 R-NAT-1127893 A4A49_17888 [cytosol] R-NAT-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119444 Canavanine biosynthesis none Nicotiana attenuata A4A49_17888 R-NAT-5138489 A4A49_17888 [plastid stroma] R-NAT-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119622 Arginine biosynthesis II (acetyl cycle) none Nicotiana attenuata A4A49_17888 R-NAT-5138489 A4A49_17888 [plastid stroma] R-NAT-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5633340 Citrulline-nitric oxide cycle none Nicotiana attenuata A4A49_17918 R-NAT-1122936-2 A4A49_17918 [cytosol] R-NAT-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119452 Galactose degradation II none Nicotiana attenuata A4A49_17941 R-NAT-5084918 A4A49_17941 [cytosol] R-NAT-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119624 Methionine salvage pathway none Nicotiana attenuata A4A49_17951 R-NAT-9826627 OSMPH1 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_17976 R-NAT-9681886-4 A4A49_17976 [cytosol] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_18005 R-NAT-5632139 A4A49_18005 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_18025 R-NAT-4415101-2 A4A49_18025 [cytosol] R-NAT-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-3899351 Abscisic acid (ABA) mediated signaling none Nicotiana attenuata A4A49_18025 R-NAT-4415101-2 A4A49_18025 [cytosol] R-NAT-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639861 Development of root hair none Nicotiana attenuata A4A49_18038 R-NAT-1122827-4 A4A49_18038 [cytosol] R-NAT-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119334 Ethylene biosynthesis from methionine none Nicotiana attenuata A4A49_18084 R-NAT-4723690 A4A49_18084 [plastid stroma] R-NAT-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119464 Methylerythritol phosphate pathway none Nicotiana attenuata A4A49_18119 R-NAT-1128337-2 A4A49_18119 [plastid stroma] R-NAT-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119308 Momilactone biosynthesis none Nicotiana attenuata A4A49_18119 R-NAT-1128244-2 A4A49_18119 [chloroplast] R-NAT-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119348 Ent-kaurene biosynthesis none Nicotiana attenuata A4A49_18150 R-NAT-5608169 A4A49_18150 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_18202 R-NAT-9640886 A4A49_18202 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_18244 R-NAT-5149657-5 A4A49_18244 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_18244 R-NAT-1129239-5 A4A49_18244 [cytosol] R-NAT-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119570 Cytosolic glycolysis none Nicotiana attenuata A4A49_18249 R-NAT-5633332 A4A49_18249 [plastid stroma] R-NAT-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5633340 Citrulline-nitric oxide cycle none Nicotiana attenuata A4A49_18257 R-NAT-1123046 A4A49_18257 [cytosol] R-NAT-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119386 UDP-N-acetylgalactosamine biosynthesis none Nicotiana attenuata A4A49_18260 R-NAT-1125399-2 A4A49_18260 [plastid] R-NAT-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119403 Removal of superoxide radicals none Nicotiana attenuata A4A49_18287 R-NAT-1127752 A4A49_18287 [cytosol] R-NAT-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119417 Stachyose biosynthesis none Nicotiana attenuata A4A49_18302 R-NAT-6787863 A4A49_18302 [nucleoplasm] R-NAT-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6788019 Salicylic acid signaling none Nicotiana attenuata A4A49_18319 R-NAT-9675876 A4A49_18319 [nucleoplasm] R-NAT-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675782 Maturation none Nicotiana attenuata A4A49_18319 R-NAT-9675876 A4A49_18319 [nucleoplasm] R-NAT-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675815 Leading strand synthesis none Nicotiana attenuata A4A49_18319 R-NAT-9675876 A4A49_18319 [nucleoplasm] R-NAT-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675885 Lagging strand synthesis none Nicotiana attenuata A4A49_18321 R-NAT-9675876-2 A4A49_18321 [nucleoplasm] R-NAT-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675782 Maturation none Nicotiana attenuata A4A49_18321 R-NAT-9675876-2 A4A49_18321 [nucleoplasm] R-NAT-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675815 Leading strand synthesis none Nicotiana attenuata A4A49_18321 R-NAT-9675876-2 A4A49_18321 [nucleoplasm] R-NAT-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675885 Lagging strand synthesis none Nicotiana attenuata A4A49_18324 R-NAT-9609343 A4A49_18324 [cytosol] R-NAT-9609352 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9609352 Lycopene catabolism none Nicotiana attenuata A4A49_18325 R-NAT-9609343-2 A4A49_18325 [cytosol] R-NAT-9609352 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9609352 Lycopene catabolism none Nicotiana attenuata A4A49_18354 R-NAT-5149632 A4A49_18354 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_18444 R-NAT-9035727-2 A4A49_18444 [cytosol] R-NAT-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9035605 Regulation of seed size none Nicotiana attenuata A4A49_18444 R-NAT-9035692-2 A4A49_18444 [nucleoplasm] R-NAT-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9035605 Regulation of seed size none Nicotiana attenuata A4A49_18474 R-NAT-9640745 A4A49_18474 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_18474 R-NAT-9640745 A4A49_18474 [nucleoplasm] R-NAT-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675824 DNA replication Initiation none Nicotiana attenuata A4A49_18499 R-NAT-5608125 A4A49_18499 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_18543 R-NAT-1125906-3 A4A49_18543 [cytosol] R-NAT-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119276 Choline biosynthesis III none Nicotiana attenuata A4A49_18617 R-NAT-9681886 A4A49_18617 [cytosol] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_18644 R-NAT-5149643 A4A49_18644 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_18647 R-NAT-5149657-4 A4A49_18647 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_18647 R-NAT-1129239-4 A4A49_18647 [cytosol] R-NAT-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119570 Cytosolic glycolysis none Nicotiana attenuata A4A49_18649 R-NAT-1128626-2 A4A49_18649 [cytosol] R-NAT-1119581 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119581 Thiosulfate disproportionation III (rhodanese) none Nicotiana attenuata A4A49_18649 R-NAT-1128626-2 A4A49_18649 [cytosol] R-NAT-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119612 Cysteine degradation none Nicotiana attenuata A4A49_18682 R-NAT-9681915-2 A4A49_18682 [Golgi membrane] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_18685 R-NAT-9916302 A4A49_18685 [nucleoplasm] R-NAT-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8934036 Long day regulated expression of florigens none Nicotiana attenuata A4A49_18685 R-NAT-9916302 A4A49_18685 [nucleoplasm] R-NAT-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9916190 Root angle formation: elongation and curvature response none Nicotiana attenuata A4A49_18686 R-NAT-9025819 A4A49_18686 [plasma membrane] R-NAT-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9025727 Iron uptake and transport in root vascular system none Nicotiana attenuata A4A49_18692 R-NAT-1129355 A4A49_18692 [plastid] R-NAT-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119403 Removal of superoxide radicals none Nicotiana attenuata A4A49_18693 R-NAT-1125504 A4A49_18693 [cytosol] R-NAT-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119273 Lysine biosynthesis I none Nicotiana attenuata A4A49_18693 R-NAT-1125504 A4A49_18693 [cytosol] R-NAT-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119283 Lysine biosynthesis II none Nicotiana attenuata A4A49_18693 R-NAT-1125504 A4A49_18693 [cytosol] R-NAT-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119295 Homoserine biosynthesis none Nicotiana attenuata A4A49_18693 R-NAT-5606489 A4A49_18693 [plastid stroma] R-NAT-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119419 Lysine biosynthesis VI none Nicotiana attenuata A4A49_18696 R-NAT-1126714 A4A49_18696 [cytosol] R-NAT-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119273 Lysine biosynthesis I none Nicotiana attenuata A4A49_18696 R-NAT-1126714 A4A49_18696 [cytosol] R-NAT-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119283 Lysine biosynthesis II none Nicotiana attenuata A4A49_18696 R-NAT-1126714 A4A49_18696 [cytosol] R-NAT-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119295 Homoserine biosynthesis none Nicotiana attenuata A4A49_18696 R-NAT-5606484 A4A49_18696 [plastid stroma] R-NAT-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119419 Lysine biosynthesis VI none Nicotiana attenuata A4A49_18697 R-NAT-1127173 A4A49_18697 [cytosol] R-NAT-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119540 Leucine biosynthesis none Nicotiana attenuata A4A49_18724 R-NAT-1126421-3 A4A49_18724 [cytosol] R-NAT-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119428 GDP-D-rhamnose biosynthesis none Nicotiana attenuata A4A49_18724 R-NAT-1126421-3 A4A49_18724 [cytosol] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_18783 R-NAT-1127820 A4A49_18783 [plasma membrane] R-NAT-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119314 Cellulose biosynthesis none Nicotiana attenuata A4A49_18784 R-NAT-5679470 A4A49_18784 [nucleoplasm] R-NAT-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5679411 Gibberellin signaling none Nicotiana attenuata A4A49_18803 R-NAT-5632121-2 A4A49_18803 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_18850 R-NAT-5632111-2 A4A49_18850 [cytosol] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_18850 R-NAT-5632216-2 phospho-A4A49_18850 [cytosol] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_18850 R-NAT-5632145-2 phospho-A4A49_18850 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_18901 R-NAT-8854121 A4A49_18901 [cytosol] R-NAT-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119556 Choline biosynthesis I none Nicotiana attenuata A4A49_18947 R-NAT-1123404-2 A4A49_18947 [peroxisomal matrix] R-NAT-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119407 Ureide biosynthesis none Nicotiana attenuata A4A49_18962 R-NAT-1130141 A4A49_18962 [mitochondrial matrix] R-NAT-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119533 TCA cycle (plant) none Nicotiana attenuata A4A49_18962 R-NAT-1130141 A4A49_18962 [mitochondrial matrix] R-NAT-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119540 Leucine biosynthesis none Nicotiana attenuata A4A49_19005 R-NAT-1126095 A4A49_19005 [cytosol] R-NAT-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119389 Phenylalanine biosynthesis I none Nicotiana attenuata A4A49_19048 R-NAT-6787202 A4A49_19048 [cytosol] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_19112 R-NAT-9640763 A4A49_19112 [nucleoplasm] R-NAT-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640887 G1/S transition none Nicotiana attenuata A4A49_19112 R-NAT-9640885 phospho-A4A49_19112 [nucleoplasm] R-NAT-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640887 G1/S transition none Nicotiana attenuata A4A49_19143 R-NAT-1124598-2 A4A49_19143 [cytosol] R-NAT-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119300 Glycolipid desaturation none Nicotiana attenuata A4A49_19150 R-NAT-9924407-3 EXPB5 [basolateral plasma membrane] R-NAT-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924451 Shoot (tiller) formation and regulation of tiller angle none Nicotiana attenuata A4A49_19182 R-NAT-1127539-2 A4A49_19182 [cytosol] R-NAT-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Nicotiana attenuata A4A49_19182 R-NAT-1127539-2 A4A49_19182 [cytosol] R-NAT-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119439 Cholesterol biosynthesis III (via desmosterol) none Nicotiana attenuata A4A49_19182 R-NAT-1127539-2 A4A49_19182 [cytosol] R-NAT-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119559 Cholesterol biosynthesis I none Nicotiana attenuata A4A49_19184 R-NAT-4415078-3 A4A49_19184 [cytosol] R-NAT-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-3899351 Abscisic acid (ABA) mediated signaling none Nicotiana attenuata A4A49_19262 R-NAT-6787933-3 A4A49_19262 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_19321 R-NAT-9611889-4 A4A49_19321 [mitochondrial matrix] R-NAT-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119479 Valine degradation none Nicotiana attenuata A4A49_19425 R-NAT-1123296 A4A49_19425 [chloroplast envelope] R-NAT-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119402 Phospholipid biosynthesis I none Nicotiana attenuata A4A49_19471 R-NAT-1130036-2 A4A49_19471 [endoplasmic reticulum membrane] R-NAT-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119402 Phospholipid biosynthesis I none Nicotiana attenuata A4A49_19518 R-NAT-1129879 A4A49_19518 [cytosol] R-NAT-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119436 Peptidoglycan biosynthesis I none Nicotiana attenuata A4A49_19573 R-NAT-4415078 A4A49_19573 [cytosol] R-NAT-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-3899351 Abscisic acid (ABA) mediated signaling none Nicotiana attenuata A4A49_19582 R-NAT-5679398-2 A4A49_19582 [cytosol] R-NAT-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5679411 Gibberellin signaling none Nicotiana attenuata A4A49_19635 R-NAT-1127455 A4A49_19635 [cytosol] R-NAT-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119460 Isoleucine biosynthesis from threonine none Nicotiana attenuata A4A49_19635 R-NAT-1127455 A4A49_19635 [cytosol] R-NAT-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119600 Valine biosynthesis none Nicotiana attenuata A4A49_19646 R-NAT-9826604-2 A4A49_19646 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_19650 R-NAT-9681910 A4A49_19650 [Golgi membrane] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_19656 R-NAT-9928771 A4A49_19656 [nucleoplasm] R-NAT-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9928831 Severe drought none Nicotiana attenuata A4A49_19659 R-NAT-1122545 A4A49_19659 [cytosol] R-NAT-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119331 Cysteine biosynthesis I none Nicotiana attenuata A4A49_19698 R-NAT-5679376 A4A49_19698 [nucleoplasm] R-NAT-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5679411 Gibberellin signaling none Nicotiana attenuata A4A49_19729 R-NAT-1126794-2 A4A49_19729 [cytosol] R-NAT-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119331 Cysteine biosynthesis I none Nicotiana attenuata A4A49_19735 R-NAT-1127089 A4A49_19735 [cytosol] R-NAT-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119465 Sucrose biosynthesis none Nicotiana attenuata A4A49_19739 R-NAT-9675807 A4A49_19739 [nucleoplasm] R-NAT-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675782 Maturation none Nicotiana attenuata A4A49_19739 R-NAT-9675807 A4A49_19739 [nucleoplasm] R-NAT-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675815 Leading strand synthesis none Nicotiana attenuata A4A49_19739 R-NAT-9675807 A4A49_19739 [nucleoplasm] R-NAT-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675885 Lagging strand synthesis none Nicotiana attenuata A4A49_19740 R-NAT-9675807-2 A4A49_19740 [nucleoplasm] R-NAT-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675782 Maturation none Nicotiana attenuata A4A49_19740 R-NAT-9675807-2 A4A49_19740 [nucleoplasm] R-NAT-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675815 Leading strand synthesis none Nicotiana attenuata A4A49_19740 R-NAT-9675807-2 A4A49_19740 [nucleoplasm] R-NAT-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675885 Lagging strand synthesis none Nicotiana attenuata A4A49_19746 R-NAT-9646016 A4A49_19746 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_19746 R-NAT-9646016 A4A49_19746 [nucleoplasm] R-NAT-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675782 Maturation none Nicotiana attenuata A4A49_19746 R-NAT-9646016 A4A49_19746 [nucleoplasm] R-NAT-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675885 Lagging strand synthesis none Nicotiana attenuata A4A49_19755 R-NAT-5146758 A4A49_19755 [mitochondrial matrix] R-NAT-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119533 TCA cycle (plant) none Nicotiana attenuata A4A49_19767 R-NAT-1127723 A4A49_19767 [cytosol] R-NAT-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119331 Cysteine biosynthesis I none Nicotiana attenuata A4A49_19829 R-NAT-1129561 A4A49_19829 [cytosol] R-NAT-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119452 Galactose degradation II none Nicotiana attenuata A4A49_19829 R-NAT-1129561 A4A49_19829 [cytosol] R-NAT-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119465 Sucrose biosynthesis none Nicotiana attenuata A4A49_19855 R-NAT-9646043 A4A49_19855 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_19855 R-NAT-9646043 A4A49_19855 [nucleoplasm] R-NAT-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675782 Maturation none Nicotiana attenuata A4A49_19855 R-NAT-9646043 A4A49_19855 [nucleoplasm] R-NAT-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675815 Leading strand synthesis none Nicotiana attenuata A4A49_19855 R-NAT-9646043 A4A49_19855 [nucleoplasm] R-NAT-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675824 DNA replication Initiation none Nicotiana attenuata A4A49_19855 R-NAT-9646043 A4A49_19855 [nucleoplasm] R-NAT-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675885 Lagging strand synthesis none Nicotiana attenuata A4A49_19905 R-NAT-5679436 A4A49_19905 [nucleoplasm] R-NAT-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5679411 Gibberellin signaling none Nicotiana attenuata A4A49_19981 R-NAT-8934084 A4A49_19981 [nucleoplasm] R-NAT-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9928995 Drought escape (DE) via ABA-dependent pathway none Nicotiana attenuata A4A49_20000 R-NAT-5655076 A4A49_20000 [Golgi lumen] R-NAT-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5655101 Xyloglucan biosynthesis none Nicotiana attenuata A4A49_20040 R-NAT-5632129-3 A4A49_20040 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_20096 R-NAT-9618156 A4A49_20096 [plasma membrane] R-NAT-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9618218 Arsenic uptake and detoxification none Nicotiana attenuata A4A49_20097 R-NAT-9618156-2 A4A49_20097 [plasma membrane] R-NAT-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9618218 Arsenic uptake and detoxification none Nicotiana attenuata A4A49_20229 R-NAT-8987473-2 A4A49_20229 [peroxisomal matrix] R-NAT-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119312 Photorespiration none Nicotiana attenuata A4A49_20229 R-NAT-1124984-2 A4A49_20229 [cytosol] R-NAT-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119596 Glutamate biosynthesis I none Nicotiana attenuata A4A49_20350 R-NAT-1127873 A4A49_20350 [plastid stroma] R-NAT-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119424 Plastid glycolysis none Nicotiana attenuata A4A49_20350 R-NAT-1127873 A4A49_20350 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_20354 R-NAT-1125406 A4A49_20354 [cytosol] R-NAT-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119418 Suberin biosynthesis none Nicotiana attenuata A4A49_20429 R-NAT-1123161 A4A49_20429 [chloroplast] R-NAT-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119494 Tryptophan biosynthesis none Nicotiana attenuata A4A49_20509 R-NAT-9675293 A4A49_20509 [nucleoplasm] R-NAT-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030557 Lateral root initiation none Nicotiana attenuata A4A49_20566 R-NAT-1129082 A4A49_20566 [mitochondrial matrix] R-NAT-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119445 Beta-alanine biosynthesis II none Nicotiana attenuata A4A49_20582 R-NAT-1127562-2 A4A49_20582 [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_20582 R-NAT-1130466-2 A4A49_20582 [cytosol] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_20628 R-NAT-9611863 A4A49_20628 [mitochondrial matrix] R-NAT-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119479 Valine degradation none Nicotiana attenuata A4A49_20651 R-NAT-5654755-2 A4A49_20651 [cytosol] R-NAT-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119393 Asparagine degradation I none Nicotiana attenuata A4A49_20678 R-NAT-1125309 A4A49_20678 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_20685 R-NAT-4752546-2 A4A49_20685 [plastid stroma] R-NAT-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119498 Phylloquinone biosynthesis none Nicotiana attenuata A4A49_20707 R-NAT-1128366 A4A49_20707 [cytosol] R-NAT-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119334 Ethylene biosynthesis from methionine none Nicotiana attenuata A4A49_20707 R-NAT-1128366 A4A49_20707 [cytosol] R-NAT-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119501 S-adenosyl-L-methionine cycle none Nicotiana attenuata A4A49_20707 R-NAT-1128366 A4A49_20707 [cytosol] R-NAT-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119624 Methionine salvage pathway none Nicotiana attenuata A4A49_20707 R-NAT-9025738 A4A49_20707 [cytosol] R-NAT-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9025754 Mugineic acid biosynthesis none Nicotiana attenuata A4A49_20721 R-NAT-8986605 A4A49_20721 [mitochondrial matrix] R-NAT-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119312 Photorespiration none Nicotiana attenuata A4A49_20721 R-NAT-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-NAT-1119351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119351 Mitochondrial pyruvate metabolism none Nicotiana attenuata A4A49_20721 R-NAT-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-NAT-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119533 TCA cycle (plant) none Nicotiana attenuata A4A49_20733 R-NAT-1128337-3 A4A49_20733 [plastid stroma] R-NAT-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119308 Momilactone biosynthesis none Nicotiana attenuata A4A49_20733 R-NAT-1128244-3 A4A49_20733 [chloroplast] R-NAT-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119348 Ent-kaurene biosynthesis none Nicotiana attenuata A4A49_20797 R-NAT-1122934 A4A49_20797 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_20799 R-NAT-5655076-3 A4A49_20799 [Golgi lumen] R-NAT-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5655101 Xyloglucan biosynthesis none Nicotiana attenuata A4A49_20825 R-NAT-1124032-2 A4A49_20825 [cytosol] R-NAT-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119540 Leucine biosynthesis none Nicotiana attenuata A4A49_20877 R-NAT-5683299-2 A4A49_20877 [cytosol] R-NAT-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119451 Xylose degradation none Nicotiana attenuata A4A49_20877 R-NAT-1130302-2 A4A49_20877 [cytosol] R-NAT-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119451 Xylose degradation none Nicotiana attenuata A4A49_20932 R-NAT-9930242 A4A49_20932 [nucleoplasm] R-NAT-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9766881 TF network involved in salinity response none Nicotiana attenuata A4A49_20944 R-NAT-3315084 A4A49_20944 [cytosol] R-NAT-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119342 Gamma-glutamyl cycle none Nicotiana attenuata A4A49_20975 R-NAT-9924407-4 EXPB5 [basolateral plasma membrane] R-NAT-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924451 Shoot (tiller) formation and regulation of tiller angle none Nicotiana attenuata A4A49_21069 R-NAT-9927865-2 A4A49_21069 [nucleoplasm] R-NAT-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8934257 Transition from vegetative to reproductive shoot apical meristem none Nicotiana attenuata A4A49_21201 R-NAT-5631958 A4A49_21201 [cytosol] R-NAT-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119289 Arginine degradation none Nicotiana attenuata A4A49_21201 R-NAT-1122345 A4A49_21201 [cytosol] R-NAT-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119318 Proline biosynthesis V (from arginine) none Nicotiana attenuata A4A49_21201 R-NAT-1122345 A4A49_21201 [cytosol] R-NAT-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119631 Proline biosynthesis I none Nicotiana attenuata A4A49_21212 R-NAT-8879009-4 A4A49_21212 [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_21419 R-NAT-9918267 ISA2 [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_21432 R-NAT-5608161-5 A4A49_21432 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_21454 R-NAT-6788026-2 A4A49_21454 [cytosol] R-NAT-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6788019 Salicylic acid signaling none Nicotiana attenuata A4A49_21480 R-NAT-1129055 A4A49_21480 [mitochondrial matrix] R-NAT-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119533 TCA cycle (plant) none Nicotiana attenuata A4A49_21487 R-NAT-1130059 A4A49_21487 [cytosol] R-NAT-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119262 Threonine biosynthesis from homoserine none Nicotiana attenuata A4A49_21508 R-NAT-1125804-2 A4A49_21508 [cytosol] R-NAT-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119300 Glycolipid desaturation none Nicotiana attenuata A4A49_21552 R-NAT-9025500 A4A49_21552 [endoplasmic reticulum membrane] R-NAT-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119325 Sphingolipid metabolism none Nicotiana attenuata A4A49_21609 R-NAT-9640664-2 A4A49_21609 [nucleoplasm] R-NAT-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640760 G1 phase none Nicotiana attenuata A4A49_21630 R-NAT-1128745 A4A49_21630 [plastid stroma] R-NAT-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119464 Methylerythritol phosphate pathway none Nicotiana attenuata A4A49_21638 R-NAT-1129208 A4A49_21638 [chloroplast envelope] R-NAT-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119402 Phospholipid biosynthesis I none Nicotiana attenuata A4A49_21687 R-NAT-1129879-2 A4A49_21687 [cytosol] R-NAT-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119436 Peptidoglycan biosynthesis I none Nicotiana attenuata A4A49_21698 R-NAT-1124348 A4A49_21698 [cytosol] R-NAT-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119465 Sucrose biosynthesis none Nicotiana attenuata A4A49_21743 R-NAT-8933784-2 A4A49_21743 [nucleoplasm] R-NAT-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8933811 Circadian rhythm none Nicotiana attenuata A4A49_21774 R-NAT-9640671-4 A4A49_21774 [nucleoplasm] R-NAT-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640760 G1 phase none Nicotiana attenuata A4A49_21774 R-NAT-9640671-4 A4A49_21774 [nucleoplasm] R-NAT-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640887 G1/S transition none Nicotiana attenuata A4A49_21800 R-NAT-9916252 OsEGT1 [nucleoplasm] R-NAT-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9916190 Root angle formation: elongation and curvature response none Nicotiana attenuata A4A49_21863 R-NAT-1125533 A4A49_21863 [cytosol] R-NAT-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119304 Putrescine biosynthesis II none Nicotiana attenuata A4A49_21887 R-NAT-9030976 A4A49_21887 [nucleoplasm] R-NAT-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654828 Strigolactone signaling none Nicotiana attenuata A4A49_21887 R-NAT-9030976 A4A49_21887 [nucleoplasm] R-NAT-9030908 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030908 Underwater shoot and internode elongation none Nicotiana attenuata A4A49_21887 R-NAT-9030976 A4A49_21887 [nucleoplasm] R-NAT-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9035605 Regulation of seed size none Nicotiana attenuata A4A49_21887 R-NAT-9035631 A4A49_21887 [cytosol] R-NAT-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9035605 Regulation of seed size none Nicotiana attenuata A4A49_21887 R-NAT-9030976 A4A49_21887 [nucleoplasm] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_21887 R-NAT-9035631 A4A49_21887 [cytosol] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_21887 R-NAT-9608743 A4A49_21887 [cytosol] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_21887 R-NAT-9608705 A4A49_21887 [nucleoplasm] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_21903 R-NAT-1130247 A4A49_21903 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_21927 R-NAT-9639892-3 A4A49_21927 [cell wall] R-NAT-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639861 Development of root hair none Nicotiana attenuata A4A49_21928 R-NAT-9639892-2 A4A49_21928 [cell wall] R-NAT-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639861 Development of root hair none Nicotiana attenuata A4A49_21979 R-NAT-9826639 A4A49_21979 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_21987 R-NAT-5632174 A4A49_21987 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_21987 R-NAT-5632174 A4A49_21987 [nucleoplasm] R-NAT-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654828 Strigolactone signaling none Nicotiana attenuata A4A49_21987 R-NAT-5632174 A4A49_21987 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_21996 R-NAT-1129921-2 A4A49_21996 [cytosol] R-NAT-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119428 GDP-D-rhamnose biosynthesis none Nicotiana attenuata A4A49_21996 R-NAT-1129921-2 A4A49_21996 [cytosol] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_22014 R-NAT-1126157-2 A4A49_22014 [cytosol] R-NAT-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119460 Isoleucine biosynthesis from threonine none Nicotiana attenuata A4A49_22014 R-NAT-1126157-2 A4A49_22014 [cytosol] R-NAT-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119600 Valine biosynthesis none Nicotiana attenuata A4A49_22020 R-NAT-9640671-2 A4A49_22020 [nucleoplasm] R-NAT-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640760 G1 phase none Nicotiana attenuata A4A49_22020 R-NAT-9640671-2 A4A49_22020 [nucleoplasm] R-NAT-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640887 G1/S transition none Nicotiana attenuata A4A49_22023 R-NAT-5654750 A4A49_22023 [cytosol] R-NAT-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119393 Asparagine degradation I none Nicotiana attenuata A4A49_22037 R-NAT-1126998 A4A49_22037 [cytosol] R-NAT-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119615 Mevalonate pathway none Nicotiana attenuata A4A49_22044 R-NAT-9766876-2 A4A49_22044 [nucleoplasm] R-NAT-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9766881 TF network involved in salinity response none Nicotiana attenuata A4A49_22044 R-NAT-9766876-2 A4A49_22044 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_22056 R-NAT-5608164 A4A49_22056 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_22056 R-NAT-5608164 A4A49_22056 [nucleoplasm] R-NAT-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030557 Lateral root initiation none Nicotiana attenuata A4A49_22056 R-NAT-5608164 A4A49_22056 [nucleoplasm] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_22056 R-NAT-9658967 A4A49_22056 [cytosol] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_22071 R-NAT-6788065-2 A4A49_22071 [nucleoplasm] R-NAT-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6788019 Salicylic acid signaling none Nicotiana attenuata A4A49_22165 R-NAT-5632334 A4A49_22165 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_22165 R-NAT-5632197 phospho-A4A49_22165 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_22165 R-NAT-5632183 phospho-A4A49_22165 [cytosol] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_22165 R-NAT-5632334 A4A49_22165 [nucleoplasm] R-NAT-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5679411 Gibberellin signaling none Nicotiana attenuata A4A49_22244 R-NAT-1125698 A4A49_22244 [cytosol] R-NAT-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119436 Peptidoglycan biosynthesis I none Nicotiana attenuata A4A49_22251 R-NAT-1127467-3 A4A49_22251 [cytosol] R-NAT-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119456 Brassinosteroid biosynthesis II none Nicotiana attenuata A4A49_22252 R-NAT-1127467 A4A49_22252 [cytosol] R-NAT-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119456 Brassinosteroid biosynthesis II none Nicotiana attenuata A4A49_22314 R-NAT-1129282-2 A4A49_22314 [cytosol] R-NAT-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119428 GDP-D-rhamnose biosynthesis none Nicotiana attenuata A4A49_22314 R-NAT-1129282-2 A4A49_22314 [cytosol] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_22342 R-NAT-3240749 A4A49_22342 [cytosol] R-NAT-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Nicotiana attenuata A4A49_22342 R-NAT-9681918 A4A49_22342 [cytosol] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_22391 R-NAT-3899389 A4A49_22391 [plasma membrane] R-NAT-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-3899351 Abscisic acid (ABA) mediated signaling none Nicotiana attenuata A4A49_22391 R-NAT-3899371 phospho-A4A49_22391 [plasma membrane] R-NAT-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-3899351 Abscisic acid (ABA) mediated signaling none Nicotiana attenuata A4A49_22410 R-NAT-1129203-2 A4A49_22410 [cytosol] R-NAT-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119428 GDP-D-rhamnose biosynthesis none Nicotiana attenuata A4A49_22410 R-NAT-1129203-2 A4A49_22410 [cytosol] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_22443 R-NAT-1124491 A4A49_22443 [plasma membrane] R-NAT-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119314 Cellulose biosynthesis none Nicotiana attenuata A4A49_22445 R-NAT-1127695 A4A49_22445 [plastid stroma] R-NAT-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119430 Chorismate biosynthesis none Nicotiana attenuata A4A49_22476 R-NAT-1125832-2 A4A49_22476 [plastid stroma] R-NAT-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119430 Chorismate biosynthesis none Nicotiana attenuata A4A49_22548 R-NAT-1129547 A4A49_22548 [cytosol] R-NAT-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119389 Phenylalanine biosynthesis I none Nicotiana attenuata A4A49_22548 R-NAT-1129547 A4A49_22548 [cytosol] R-NAT-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119400 Methionine biosynthesis II none Nicotiana attenuata A4A49_22548 R-NAT-1129547 A4A49_22548 [cytosol] R-NAT-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119506 tyrosine degradation I none Nicotiana attenuata A4A49_22594 R-NAT-8868990 A4A49_22594 [endoplasmic reticulum membrane] R-NAT-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8868949 Intracellular auxin transport none Nicotiana attenuata A4A49_22613 R-NAT-9766892 SAPK1 [nucleoplasm] R-NAT-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9766881 TF network involved in salinity response none Nicotiana attenuata A4A49_22701 R-NAT-1122827-5 A4A49_22701 [cytosol] R-NAT-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119334 Ethylene biosynthesis from methionine none Nicotiana attenuata A4A49_22759 R-NAT-5149694 A4A49_22759 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_22770 R-NAT-1123077 A4A49_22770 [cytosol] R-NAT-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119458 Glutamate degradation none Nicotiana attenuata A4A49_22805 R-NAT-9636827-2 A4A49_22805 [nucleoplasm] R-NAT-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9766881 TF network involved in salinity response none Nicotiana attenuata A4A49_22855 R-NAT-1124242 A4A49_22855 [plastid stroma] R-NAT-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119464 Methylerythritol phosphate pathway none Nicotiana attenuata A4A49_22904 R-NAT-9618197 A4A49_22904 [plasma membrane] R-NAT-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9618218 Arsenic uptake and detoxification none Nicotiana attenuata A4A49_23039 R-NAT-9681910-2 A4A49_23039 [Golgi membrane] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_23049 R-NAT-9930180 OsNAC3 [nucleoplasm] R-NAT-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9766881 TF network involved in salinity response none Nicotiana attenuata A4A49_23129 R-NAT-1127502 A4A49_23129 [cytosol] R-NAT-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119394 Pantothenate and coenzyme A biosynthesis III none Nicotiana attenuata A4A49_23134 R-NAT-5608184 A4A49_23134 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_23134 R-NAT-5608184 A4A49_23134 [nucleoplasm] R-NAT-9675304 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675304 Lateral root emergence none Nicotiana attenuata A4A49_23173 R-NAT-6787202-3 A4A49_23173 [cytosol] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_23174 R-NAT-9826647-2 A4A49_23174 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_23231 R-NAT-9025541 A4A49_23231 [endoplasmic reticulum membrane] R-NAT-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119325 Sphingolipid metabolism none Nicotiana attenuata A4A49_23316 R-NAT-5654911 A4A49_23316 [Golgi lumen] R-NAT-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654909 Xylan biosynthesis none Nicotiana attenuata A4A49_23317 R-NAT-6787119 A4A49_23317 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_23318 R-NAT-5138481 A4A49_23318 [plastid stroma] R-NAT-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119263 Arginine biosynthesis none Nicotiana attenuata A4A49_23318 R-NAT-5138481 A4A49_23318 [plastid stroma] R-NAT-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119539 Ornithine biosynthesis none Nicotiana attenuata A4A49_23335 R-NAT-5631969 A4A49_23335 [mitochondrial matrix] R-NAT-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119289 Arginine degradation none Nicotiana attenuata A4A49_23335 R-NAT-5633275 A4A49_23335 [cytosol] R-NAT-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119495 Citrulline biosynthesis none Nicotiana attenuata A4A49_23337 R-NAT-1128197 A4A49_23337 [plastid stroma] R-NAT-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119430 Chorismate biosynthesis none Nicotiana attenuata A4A49_23338 R-NAT-1126421-2 A4A49_23338 [cytosol] R-NAT-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119428 GDP-D-rhamnose biosynthesis none Nicotiana attenuata A4A49_23338 R-NAT-1126421-2 A4A49_23338 [cytosol] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_23365 R-NAT-1126131 A4A49_23365 [cytosol] R-NAT-1119528 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119528 Beta-alanine betaine biosynthesis none Nicotiana attenuata A4A49_23398 R-NAT-1125967 A4A49_23398 [cytosol] R-NAT-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119316 Phenylpropanoid biosynthesis none Nicotiana attenuata A4A49_23417 R-NAT-1127357 A4A49_23417 [cytosol] R-NAT-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119273 Lysine biosynthesis I none Nicotiana attenuata A4A49_23417 R-NAT-1127357 A4A49_23417 [cytosol] R-NAT-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119283 Lysine biosynthesis II none Nicotiana attenuata A4A49_23421 R-NAT-1125494 A4A49_23421 [endoplasmic reticulum membrane] R-NAT-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119402 Phospholipid biosynthesis I none Nicotiana attenuata A4A49_23429 R-NAT-1129846 A4A49_23429 [mitochondrion] R-NAT-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119337 Proline degradation none Nicotiana attenuata A4A49_23429 R-NAT-1129846 A4A49_23429 [mitochondrion] R-NAT-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119458 Glutamate degradation none Nicotiana attenuata A4A49_23431 R-NAT-1124742 A4A49_23431 [cytosol] R-NAT-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119410 Ascorbate biosynthesis none Nicotiana attenuata A4A49_23431 R-NAT-1124742 A4A49_23431 [cytosol] R-NAT-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119570 Cytosolic glycolysis none Nicotiana attenuata A4A49_23447 R-NAT-1130210-2 A4A49_23447 [cytosol] R-NAT-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119586 Cyanate degradation none Nicotiana attenuata A4A49_23448 R-NAT-9826654 A4A49_23448 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_23482 R-NAT-6787933-2 A4A49_23482 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_23500 R-NAT-5606521 A4A49_23500 [plastid stroma] R-NAT-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119419 Lysine biosynthesis VI none Nicotiana attenuata A4A49_23515 R-NAT-1127089-2 A4A49_23515 [cytosol] R-NAT-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119465 Sucrose biosynthesis none Nicotiana attenuata A4A49_23517 R-NAT-9924379-3 HSFA2D [nucleoplasm] R-NAT-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924451 Shoot (tiller) formation and regulation of tiller angle none Nicotiana attenuata A4A49_23546 R-NAT-5149683-2 A4A49_23546 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_23556 R-NAT-1130032 A4A49_23556 [mitochondrial inner membrane] R-NAT-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119260 Cardiolipin biosynthesis none Nicotiana attenuata A4A49_23613 R-NAT-8987505 A4A49_23613 [mitochondrial matrix] R-NAT-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119312 Photorespiration none Nicotiana attenuata A4A49_23731 R-NAT-1122932 A4A49_23731 [cytosol] R-NAT-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119317 Spermine biosynthesis none Nicotiana attenuata A4A49_23731 R-NAT-1122932 A4A49_23731 [cytosol] R-NAT-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119343 Spermidine biosynthesis none Nicotiana attenuata A4A49_23731 R-NAT-1122932 A4A49_23731 [cytosol] R-NAT-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119446 Lysine degradation I none Nicotiana attenuata A4A49_23743 R-NAT-9826620-3 HOX12/ OsGT1 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_23743 R-NAT-9826620-3 HOX12/ OsGT1 [nucleoplasm] R-NAT-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Nicotiana attenuata A4A49_23758 R-NAT-5149657-3 A4A49_23758 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_23758 R-NAT-1129239-3 A4A49_23758 [cytosol] R-NAT-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119570 Cytosolic glycolysis none Nicotiana attenuata A4A49_23823 R-NAT-5679401 A4A49_23823 [nucleoplasm] R-NAT-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5679411 Gibberellin signaling none Nicotiana attenuata A4A49_23850 R-NAT-9640785-2 A4A49_23850 [nucleoplasm] R-NAT-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640882 Assembly of pre-replication complex none Nicotiana attenuata A4A49_23850 R-NAT-9640785-2 A4A49_23850 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_23900 R-NAT-1125556 A4A49_23900 [cytosol] R-NAT-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119410 Ascorbate biosynthesis none Nicotiana attenuata A4A49_23900 R-NAT-1125556 A4A49_23900 [cytosol] R-NAT-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119628 GDP-mannose metabolism none Nicotiana attenuata A4A49_23921 R-NAT-9826639-4 A4A49_23921 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_23983 R-NAT-9826669 OsYABBY6 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_24015 R-NAT-1130006-2 A4A49_24015 [plastid stroma] R-NAT-1119569 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119569 Kievitone biosynthesis none Nicotiana attenuata A4A49_24040 R-NAT-9640777-3 A4A49_24040 [nucleoplasm] R-NAT-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640760 G1 phase none Nicotiana attenuata A4A49_24040 R-NAT-9640777-3 A4A49_24040 [nucleoplasm] R-NAT-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640887 G1/S transition none Nicotiana attenuata A4A49_24054 R-NAT-9645872 A4A49_24054 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_24078 R-NAT-1126883 A4A49_24078 [cytosol] R-NAT-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119389 Phenylalanine biosynthesis I none Nicotiana attenuata A4A49_24115 R-NAT-1126400 A4A49_24115 [chloroplast] R-NAT-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119494 Tryptophan biosynthesis none Nicotiana attenuata A4A49_24203 R-NAT-4415101-3 A4A49_24203 [cytosol] R-NAT-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-3899351 Abscisic acid (ABA) mediated signaling none Nicotiana attenuata A4A49_24203 R-NAT-4415101-3 A4A49_24203 [cytosol] R-NAT-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639861 Development of root hair none Nicotiana attenuata A4A49_24217 R-NAT-8933710 A4A49_24217 [nucleoplasm] R-NAT-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8933811 Circadian rhythm none Nicotiana attenuata A4A49_24228 R-NAT-4415007 A4A49_24228 [cytosol] R-NAT-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-3899351 Abscisic acid (ABA) mediated signaling none Nicotiana attenuata A4A49_24228 R-NAT-4415016 phospho-A4A49_24228 [cytosol] R-NAT-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-3899351 Abscisic acid (ABA) mediated signaling none Nicotiana attenuata A4A49_24228 R-NAT-4415007 A4A49_24228 [cytosol] R-NAT-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639861 Development of root hair none Nicotiana attenuata A4A49_24235 R-NAT-9681915 A4A49_24235 [Golgi membrane] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_24251 R-NAT-1126888-2 A4A49_24251 [cytosol] R-NAT-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119360 Fructan biosynthesis none Nicotiana attenuata A4A49_24253 R-NAT-1125569 A4A49_24253 [cytosol] R-NAT-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119516 Trehalose biosynthesis I none Nicotiana attenuata A4A49_24312 R-NAT-1128257 A4A49_24312 [plastid stroma] R-NAT-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119529 Sulfate activation for sulfonation none Nicotiana attenuata A4A49_24319 R-NAT-5225766-2 A4A49_24319 [nucleoplasm] R-NAT-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5225756 Ethylene mediated signaling none Nicotiana attenuata A4A49_24395 R-NAT-9920344-2 A4A49_24395 [nucleoplasm] R-NAT-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8934108 Short day regulated expression of florigens none Nicotiana attenuata A4A49_24422 R-NAT-5632238 A4A49_24422 [cytosol] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_24422 R-NAT-5632238 A4A49_24422 [cytosol] R-NAT-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8934257 Transition from vegetative to reproductive shoot apical meristem none Nicotiana attenuata A4A49_24422 R-NAT-9927894 A4A49_24422 [nucleoplasm] R-NAT-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8934257 Transition from vegetative to reproductive shoot apical meristem none Nicotiana attenuata A4A49_24422 R-NAT-5632238 A4A49_24422 [cytosol] R-NAT-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9609102 Flower development none Nicotiana attenuata A4A49_24422 R-NAT-5632238 A4A49_24422 [cytosol] R-NAT-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9928831 Severe drought none Nicotiana attenuata A4A49_24422 R-NAT-9927894 A4A49_24422 [nucleoplasm] R-NAT-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9928831 Severe drought none Nicotiana attenuata A4A49_24456 R-NAT-1123895-4 A4A49_24456 [cytosol] R-NAT-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119334 Ethylene biosynthesis from methionine none Nicotiana attenuata A4A49_24456 R-NAT-1123895-4 A4A49_24456 [cytosol] R-NAT-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119624 Methionine salvage pathway none Nicotiana attenuata A4A49_24469 R-NAT-9916125 A4A49_24469 [nucleoplasm] R-NAT-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9916190 Root angle formation: elongation and curvature response none Nicotiana attenuata A4A49_24469 R-NAT-9916231 A4A49_24469 [cytosol] R-NAT-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9916190 Root angle formation: elongation and curvature response none Nicotiana attenuata A4A49_24469 R-NAT-9916199 phospho-A4A49_24469 [cytosol] R-NAT-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9916190 Root angle formation: elongation and curvature response none Nicotiana attenuata A4A49_24520 R-NAT-9924407-2 EXPB5 [basolateral plasma membrane] R-NAT-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924451 Shoot (tiller) formation and regulation of tiller angle none Nicotiana attenuata A4A49_24525 R-NAT-9826666 A4A49_24525 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_24556 R-NAT-1125187-2 A4A49_24556 [cytosol] R-NAT-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119276 Choline biosynthesis III none Nicotiana attenuata A4A49_24598 R-NAT-5221144-3 A4A49_24598 [plastid] R-NAT-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119374 Abscisic acid biosynthesis none Nicotiana attenuata A4A49_24601 R-NAT-1124496-3 A4A49_24601 [cytosol] R-NAT-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119615 Mevalonate pathway none Nicotiana attenuata A4A49_24641 R-NAT-5608164-2 A4A49_24641 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_24641 R-NAT-5608164-2 A4A49_24641 [nucleoplasm] R-NAT-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030557 Lateral root initiation none Nicotiana attenuata A4A49_24641 R-NAT-5608164-2 A4A49_24641 [nucleoplasm] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_24641 R-NAT-9658967-2 A4A49_24641 [cytosol] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_24649 R-NAT-1124490-2 A4A49_24649 [cytosol] R-NAT-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119534 Pyridoxal 5'-phosphate salvage pathway none Nicotiana attenuata A4A49_24649 R-NAT-1124490-2 A4A49_24649 [cytosol] R-NAT-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119594 Pyridoxal 5'-phosphate biosynthesis none Nicotiana attenuata A4A49_24650 R-NAT-1124490 A4A49_24650 [cytosol] R-NAT-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119534 Pyridoxal 5'-phosphate salvage pathway none Nicotiana attenuata A4A49_24650 R-NAT-1124490 A4A49_24650 [cytosol] R-NAT-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119594 Pyridoxal 5'-phosphate biosynthesis none Nicotiana attenuata A4A49_24665 R-NAT-5632111 A4A49_24665 [cytosol] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_24665 R-NAT-5632216 phospho-A4A49_24665 [cytosol] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_24665 R-NAT-5632145 phospho-A4A49_24665 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_24677 R-NAT-9826635-2 PCF8 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_24707 R-NAT-1125587 A4A49_24707 [cytosol] R-NAT-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119379 Flavin biosynthesis none Nicotiana attenuata A4A49_24733 R-NAT-1128632 A4A49_24733 [cytosol] R-NAT-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119465 Sucrose biosynthesis none Nicotiana attenuata A4A49_24733 R-NAT-1128632 A4A49_24733 [cytosol] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_24734 R-NAT-1128632-2 A4A49_24734 [cytosol] R-NAT-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119465 Sucrose biosynthesis none Nicotiana attenuata A4A49_24734 R-NAT-1128632-2 A4A49_24734 [cytosol] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_24839 R-NAT-9608678-2 A4A49_24839 [cytosol] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_24839 R-NAT-8986843-2 A4A49_24839 [nucleoplasm] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_24859 R-NAT-1125275 A4A49_24859 [cytosol] R-NAT-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119629 Thiamine biosynthesis none Nicotiana attenuata A4A49_24941 R-NAT-5633387-4 A4A49_24941 [mitochondrial matrix] R-NAT-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119445 Beta-alanine biosynthesis II none Nicotiana attenuata A4A49_25006 R-NAT-8868904-2 A4A49_25006 [endoplasmic reticulum membrane] R-NAT-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8868949 Intracellular auxin transport none Nicotiana attenuata A4A49_25089 R-NAT-8879029-9 DREB1G [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_25089 R-NAT-8879085-2 A4A49_25089 [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_25089 R-NAT-8879050-5 CBF1 homolog [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_25092 R-NAT-5632268 A4A49_25092 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_25100 R-NAT-5149678 A4A49_25100 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_25158 R-NAT-9611889 A4A49_25158 [mitochondrial matrix] R-NAT-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119479 Valine degradation none Nicotiana attenuata A4A49_25254 R-NAT-1123525 A4A49_25254 [cytosol] R-NAT-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119384 NAD biosynthesis I (from aspartate) none Nicotiana attenuata A4A49_25255 R-NAT-6788042 A4A49_25255 [nucleoplasm] R-NAT-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6788019 Salicylic acid signaling none Nicotiana attenuata A4A49_25299 R-NAT-1127031-2 A4A49_25299 [cytosol] R-NAT-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119460 Isoleucine biosynthesis from threonine none Nicotiana attenuata A4A49_25305 R-NAT-9640739-2 A4A49_25305 [nucleoplasm] R-NAT-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640887 G1/S transition none Nicotiana attenuata A4A49_25314 R-NAT-9640786 A4A49_25314 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_25314 R-NAT-9640786 A4A49_25314 [nucleoplasm] R-NAT-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675824 DNA replication Initiation none Nicotiana attenuata A4A49_25426 R-NAT-5633387-2 A4A49_25426 [mitochondrial matrix] R-NAT-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119445 Beta-alanine biosynthesis II none Nicotiana attenuata A4A49_25430 R-NAT-1125734 A4A49_25430 [cytosol] R-NAT-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119281 Aspartate biosynthesis I none Nicotiana attenuata A4A49_25430 R-NAT-5632000 A4A49_25430 [plastid stroma] R-NAT-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119553 Asparagine biosynthesis none Nicotiana attenuata A4A49_25438 R-NAT-1128707-4 A4A49_25438 [cytosol] R-NAT-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Nicotiana attenuata A4A49_25438 R-NAT-1128707-4 A4A49_25438 [cytosol] R-NAT-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119370 Sterol biosynthesis none Nicotiana attenuata A4A49_25438 R-NAT-1128707-4 A4A49_25438 [cytosol] R-NAT-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119439 Cholesterol biosynthesis III (via desmosterol) none Nicotiana attenuata A4A49_25438 R-NAT-1128707-4 A4A49_25438 [cytosol] R-NAT-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119559 Cholesterol biosynthesis I none Nicotiana attenuata A4A49_25448 R-NAT-5632268-2 A4A49_25448 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_25470 R-NAT-6787276 A4A49_25470 [plastid stroma] R-NAT-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119261 Salicylate biosynthesis none Nicotiana attenuata A4A49_25470 R-NAT-6787950 A4A49_25470 [nucleoplasm] R-NAT-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6788019 Salicylic acid signaling none Nicotiana attenuata A4A49_25473 R-NAT-1124037 A4A49_25473 [mitochondrial matrix] R-NAT-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119289 Arginine degradation none Nicotiana attenuata A4A49_25492 R-NAT-8853988-2 Phosphatidylglycerophosphatase [mitochondrial matrix] R-NAT-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119260 Cardiolipin biosynthesis none Nicotiana attenuata A4A49_25496 R-NAT-1129585-2 A4A49_25496 [cytosol] R-NAT-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119265 Tetrahydrofolate biosynthesis I none Nicotiana attenuata A4A49_25496 R-NAT-1129585-2 A4A49_25496 [cytosol] R-NAT-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119523 Tetrahydrofolate biosynthesis II none Nicotiana attenuata A4A49_25502 R-NAT-1130235-2 A4A49_25502 [cytosol] R-NAT-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119261 Salicylate biosynthesis none Nicotiana attenuata A4A49_25502 R-NAT-1130235-2 A4A49_25502 [cytosol] R-NAT-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119418 Suberin biosynthesis none Nicotiana attenuata A4A49_25502 R-NAT-1130235-2 A4A49_25502 [cytosol] R-NAT-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119582 Phenylpropanoid biosynthesis, initial reactions none Nicotiana attenuata A4A49_25599 R-NAT-1130348 A4A49_25599 [cytosol] R-NAT-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Nicotiana attenuata A4A49_25667 R-NAT-5138484 A4A49_25667 [plastid stroma] R-NAT-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119263 Arginine biosynthesis none Nicotiana attenuata A4A49_25667 R-NAT-5138484 A4A49_25667 [plastid stroma] R-NAT-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119539 Ornithine biosynthesis none Nicotiana attenuata A4A49_25667 R-NAT-5138484 A4A49_25667 [plastid stroma] R-NAT-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119622 Arginine biosynthesis II (acetyl cycle) none Nicotiana attenuata A4A49_25825 R-NAT-9658664-2 A4A49_25825 [plasma membrane] R-NAT-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119567 Beta-alanine biosynthesis I none Nicotiana attenuata A4A49_25842 R-NAT-4754220 A4A49_25842 [plastid stroma] R-NAT-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119449 Carotenoid biosynthesis none Nicotiana attenuata A4A49_25842 R-NAT-1126847 A4A49_25842 [cytosol] R-NAT-1119492 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119492 Lactucaxanthin biosynthesis none Nicotiana attenuata A4A49_25843 R-NAT-1125910-4 A4A49_25843 [plastid stroma] R-NAT-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119367 Polyisoprenoid biosynthesis none Nicotiana attenuata A4A49_25847 R-NAT-9640698 A4A49_25847 [nucleoplasm] R-NAT-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640887 G1/S transition none Nicotiana attenuata A4A49_25919 R-NAT-5608154 A4A49_25919 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_25932 R-NAT-1123998-2 A4A49_25932 [chloroplast] R-NAT-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119494 Tryptophan biosynthesis none Nicotiana attenuata A4A49_25941 R-NAT-9639217 A4A49_25941 [plasma membrane] R-NAT-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639136 Response to Aluminum stress none Nicotiana attenuata A4A49_25950 R-NAT-9681910-6 A4A49_25950 [Golgi membrane] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_25980 R-NAT-1123717-4 A4A49_25980 [cytosol] R-NAT-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119395 Maackiain biosynthesis none Nicotiana attenuata A4A49_25980 R-NAT-1123717-4 A4A49_25980 [cytosol] R-NAT-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119453 Medicarpin biosynthesis none Nicotiana attenuata A4A49_26033 R-NAT-9025463-2 A4A49_26033 [endoplasmic reticulum membrane] R-NAT-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119325 Sphingolipid metabolism none Nicotiana attenuata A4A49_26034 R-NAT-9640752 A4A49_26034 [nucleoplasm] R-NAT-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640882 Assembly of pre-replication complex none Nicotiana attenuata A4A49_26034 R-NAT-9640752 A4A49_26034 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_26107 R-NAT-9918175 A4A49_26107 [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_26391 R-NAT-9025443 A4A49_26391 [endoplasmic reticulum membrane] R-NAT-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119325 Sphingolipid metabolism none Nicotiana attenuata A4A49_26398 R-NAT-1128178 A4A49_26398 [cytosol] R-NAT-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119322 Leucodelphinidin biosynthesis none Nicotiana attenuata A4A49_26398 R-NAT-1128178 A4A49_26398 [cytosol] R-NAT-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Nicotiana attenuata A4A49_26398 R-NAT-9609575 A4A49_26398 [endoplasmic reticulum membrane] R-NAT-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9609573 Tricin biosynthesis none Nicotiana attenuata A4A49_26421 R-NAT-1123717-2 A4A49_26421 [cytosol] R-NAT-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119395 Maackiain biosynthesis none Nicotiana attenuata A4A49_26421 R-NAT-1123717-2 A4A49_26421 [cytosol] R-NAT-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119453 Medicarpin biosynthesis none Nicotiana attenuata A4A49_26447 R-NAT-1128385 A4A49_26447 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_26487 R-NAT-6788120 A4A49_26487 [nucleoplasm] R-NAT-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6788019 Salicylic acid signaling none Nicotiana attenuata A4A49_26487 R-NAT-6788120 A4A49_26487 [nucleoplasm] R-NAT-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9766881 TF network involved in salinity response none Nicotiana attenuata A4A49_26492 R-NAT-8933856-2 A4A49_26492 [nucleoplasm] R-NAT-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8933811 Circadian rhythm none Nicotiana attenuata A4A49_26492 R-NAT-8933748-2 A4A49_26492 [cytosol] R-NAT-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8933811 Circadian rhythm none Nicotiana attenuata A4A49_26492 R-NAT-8933856-2 A4A49_26492 [nucleoplasm] R-NAT-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8934036 Long day regulated expression of florigens none Nicotiana attenuata A4A49_26492 R-NAT-8933856-2 A4A49_26492 [nucleoplasm] R-NAT-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9928995 Drought escape (DE) via ABA-dependent pathway none Nicotiana attenuata A4A49_26511 R-NAT-1127076-2 A4A49_26511 [cytosol] R-NAT-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119418 Suberin biosynthesis none Nicotiana attenuata A4A49_26511 R-NAT-1127076-2 A4A49_26511 [cytosol] R-NAT-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119582 Phenylpropanoid biosynthesis, initial reactions none Nicotiana attenuata A4A49_26532 R-NAT-1125340 A4A49_26532 [plastid stroma] R-NAT-1119274 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119274 Monoterpene biosynthesis none Nicotiana attenuata A4A49_26532 R-NAT-1125340 A4A49_26532 [plastid stroma] R-NAT-1119593 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119593 Oleoresin monoterpene volatiles biosynthesis none Nicotiana attenuata A4A49_26537 R-NAT-4827081 A4A49_26537 [plastid stroma] R-NAT-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-4827054 Tetrapyrrole biosynthesis I none Nicotiana attenuata A4A49_26539 R-NAT-8933787 A4A49_26539 [nucleoplasm] R-NAT-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8933811 Circadian rhythm none Nicotiana attenuata A4A49_26551 R-NAT-1125974-2 A4A49_26551 [cytosol] R-NAT-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119262 Threonine biosynthesis from homoserine none Nicotiana attenuata A4A49_26551 R-NAT-1125974-2 A4A49_26551 [cytosol] R-NAT-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119400 Methionine biosynthesis II none Nicotiana attenuata A4A49_26601 R-NAT-9025372-2 A4A49_26601 [endoplasmic reticulum membrane] R-NAT-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119402 Phospholipid biosynthesis I none Nicotiana attenuata A4A49_26602 R-NAT-5149676 A4A49_26602 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_26656 R-NAT-1127734 A4A49_26656 [cytosol] R-NAT-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119506 tyrosine degradation I none Nicotiana attenuata A4A49_26688 R-NAT-5654859 A4A49_26688 [nucleoplasm] R-NAT-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654828 Strigolactone signaling none Nicotiana attenuata A4A49_26688 R-NAT-5654859 A4A49_26688 [nucleoplasm] R-NAT-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Nicotiana attenuata A4A49_26758 R-NAT-9638999-3 A4A49_26758 [cytosol] R-NAT-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119434 Phytic acid biosynthesis (lipid-independent) none Nicotiana attenuata A4A49_26806 R-NAT-9618056-8 A4A49_26806 [plasma membrane] R-NAT-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9618218 Arsenic uptake and detoxification none Nicotiana attenuata A4A49_26831 R-NAT-4415007-2 A4A49_26831 [cytosol] R-NAT-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-3899351 Abscisic acid (ABA) mediated signaling none Nicotiana attenuata A4A49_26831 R-NAT-4415016-2 phospho-A4A49_26831 [cytosol] R-NAT-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-3899351 Abscisic acid (ABA) mediated signaling none Nicotiana attenuata A4A49_26831 R-NAT-4415007-2 A4A49_26831 [cytosol] R-NAT-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639861 Development of root hair none Nicotiana attenuata A4A49_26861 R-NAT-5608161 A4A49_26861 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_26864 R-NAT-1130235 A4A49_26864 [cytosol] R-NAT-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119261 Salicylate biosynthesis none Nicotiana attenuata A4A49_26864 R-NAT-1130235 A4A49_26864 [cytosol] R-NAT-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119418 Suberin biosynthesis none Nicotiana attenuata A4A49_26864 R-NAT-1130235 A4A49_26864 [cytosol] R-NAT-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119582 Phenylpropanoid biosynthesis, initial reactions none Nicotiana attenuata A4A49_26898 R-NAT-1128980 A4A49_26898 [cytosol] R-NAT-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119586 Cyanate degradation none Nicotiana attenuata A4A49_26958 R-NAT-1130222-2 A4A49_26958 [cytosol] R-NAT-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119596 Glutamate biosynthesis I none Nicotiana attenuata A4A49_26960 R-NAT-1130222 A4A49_26960 [cytosol] R-NAT-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119596 Glutamate biosynthesis I none Nicotiana attenuata A4A49_26987 R-NAT-9930255 MPK15 [nucleoplasm] R-NAT-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9766881 TF network involved in salinity response none Nicotiana attenuata A4A49_27007 R-NAT-1128200 A4A49_27007 [cytosol] R-NAT-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119316 Phenylpropanoid biosynthesis none Nicotiana attenuata A4A49_27050 R-NAT-1127574-2 A4A49_27050 [cytosol] R-NAT-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119465 Sucrose biosynthesis none Nicotiana attenuata A4A49_27116 R-NAT-9675272 A4A49_27116 [plasma membrane] R-NAT-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030654 Primary root development none Nicotiana attenuata A4A49_27140 R-NAT-8858085 A4A49_27140 [plasma membrane] R-NAT-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8858053 Polar auxin transport none Nicotiana attenuata A4A49_27140 R-NAT-8858085 A4A49_27140 [plasma membrane] R-NAT-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924494 Gravity sensing and statolith sedimentation none Nicotiana attenuata A4A49_27140 R-NAT-9928298 PIN2 [endosome] R-NAT-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924494 Gravity sensing and statolith sedimentation none Nicotiana attenuata A4A49_27214 R-NAT-9675391 A4A49_27214 [nucleoplasm] R-NAT-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675508 Root elongation none Nicotiana attenuata A4A49_27251 R-NAT-5221147 A4A49_27251 [cytosol] R-NAT-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-3899351 Abscisic acid (ABA) mediated signaling none Nicotiana attenuata A4A49_27261 R-NAT-1123337 A4A49_27261 [plastid stroma] R-NAT-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119509 Histidine biosynthesis I none Nicotiana attenuata A4A49_27314 R-NAT-1124959 A4A49_27314 [cytosol] R-NAT-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119623 Acyl-CoA synthetase pathway none Nicotiana attenuata A4A49_27370 R-NAT-1129818 A4A49_27370 [mitochondrial matrix] R-NAT-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119365 Lysine degradation II none Nicotiana attenuata A4A49_27370 R-NAT-1173242 A4A49_27370 [mitochondrial matrix] R-NAT-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119533 TCA cycle (plant) none Nicotiana attenuata A4A49_27372 R-NAT-2672431 A4A49_27372 [cytosol] R-NAT-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119322 Leucodelphinidin biosynthesis none Nicotiana attenuata A4A49_27372 R-NAT-2672431 A4A49_27372 [cytosol] R-NAT-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Nicotiana attenuata A4A49_27372 R-NAT-1124195 A4A49_27372 [cytosol] R-NAT-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119531 Flavonoid biosynthesis none Nicotiana attenuata A4A49_27375 R-NAT-1128624 A4A49_27375 [mitochondrial inner membrane] R-NAT-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119479 Valine degradation none Nicotiana attenuata A4A49_27381 R-NAT-1126549-2 A4A49_27381 [cytosol] R-NAT-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119486 IAA biosynthesis I none Nicotiana attenuata A4A49_27413 R-NAT-9826681 EREBP129 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_27433 R-NAT-9618056-3 A4A49_27433 [plasma membrane] R-NAT-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9618218 Arsenic uptake and detoxification none Nicotiana attenuata A4A49_27438 R-NAT-1124778-3 A4A49_27438 [plastid stroma] R-NAT-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119464 Methylerythritol phosphate pathway none Nicotiana attenuata A4A49_27452 R-NAT-9025699-3 A4A49_27452 [plasma membrane] R-NAT-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8858053 Polar auxin transport none Nicotiana attenuata A4A49_27452 R-NAT-9025699-3 A4A49_27452 [plasma membrane] R-NAT-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9025727 Iron uptake and transport in root vascular system none Nicotiana attenuata A4A49_27466 R-NAT-4415060 A4A49_27466 [plasma membrane] R-NAT-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-3899351 Abscisic acid (ABA) mediated signaling none Nicotiana attenuata A4A49_27466 R-NAT-4415065 phospho-A4A49_27466 [plasma membrane] R-NAT-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-3899351 Abscisic acid (ABA) mediated signaling none Nicotiana attenuata A4A49_27475 R-NAT-5225766 A4A49_27475 [nucleoplasm] R-NAT-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5225756 Ethylene mediated signaling none Nicotiana attenuata A4A49_27485 R-NAT-8933856 A4A49_27485 [nucleoplasm] R-NAT-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8933811 Circadian rhythm none Nicotiana attenuata A4A49_27485 R-NAT-8933748 A4A49_27485 [cytosol] R-NAT-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8933811 Circadian rhythm none Nicotiana attenuata A4A49_27485 R-NAT-8933856 A4A49_27485 [nucleoplasm] R-NAT-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8934036 Long day regulated expression of florigens none Nicotiana attenuata A4A49_27485 R-NAT-8933856 A4A49_27485 [nucleoplasm] R-NAT-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9928995 Drought escape (DE) via ABA-dependent pathway none Nicotiana attenuata A4A49_27490 R-NAT-1122242 A4A49_27490 [cytosol] R-NAT-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119267 Phenylalanine degradation III none Nicotiana attenuata A4A49_27512 R-NAT-1126307-2 A4A49_27512 [cytosol] R-NAT-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119370 Sterol biosynthesis none Nicotiana attenuata A4A49_27532 R-NAT-5632129-2 A4A49_27532 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_27557 R-NAT-9675790-2 A4A49_27557 [nucleoplasm] R-NAT-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675824 DNA replication Initiation none Nicotiana attenuata A4A49_27559 R-NAT-1130235-4 A4A49_27559 [cytosol] R-NAT-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119261 Salicylate biosynthesis none Nicotiana attenuata A4A49_27559 R-NAT-1130235-4 A4A49_27559 [cytosol] R-NAT-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119418 Suberin biosynthesis none Nicotiana attenuata A4A49_27559 R-NAT-1130235-4 A4A49_27559 [cytosol] R-NAT-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119582 Phenylpropanoid biosynthesis, initial reactions none Nicotiana attenuata A4A49_27594 R-NAT-8858070 A4A49_27594 [plasma membrane] R-NAT-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639861 Development of root hair none Nicotiana attenuata A4A49_27603 R-NAT-8854121-6 A4A49_27603 [cytosol] R-NAT-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119556 Choline biosynthesis I none Nicotiana attenuata A4A49_27626 R-NAT-9684723-3 A4A49_27626 [cytosol] R-NAT-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9609102 Flower development none Nicotiana attenuata A4A49_27632 R-NAT-1130416 A4A49_27632 [mitochondrial matrix] R-NAT-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119337 Proline degradation none Nicotiana attenuata A4A49_27632 R-NAT-1130416 A4A49_27632 [mitochondrial matrix] R-NAT-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119495 Citrulline biosynthesis none Nicotiana attenuata A4A49_27686 R-NAT-1128319-3 A4A49_27686 [cytosol] R-NAT-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119341 Galactosylcyclitol biosynthesis none Nicotiana attenuata A4A49_27690 R-NAT-9025712 A4A49_27690 [cytosol] R-NAT-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9025754 Mugineic acid biosynthesis none Nicotiana attenuata A4A49_27758 R-NAT-1130078 A4A49_27758 [cytosol] R-NAT-1119440 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119440 Anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside) none Nicotiana attenuata A4A49_27758 R-NAT-2672102 A4A49_27758 [cytosol] R-NAT-1119514 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119514 Anthocyanin biosynthesis (delphinidin 3-O-glucoside) none Nicotiana attenuata A4A49_27795 R-NAT-9826647 A4A49_27795 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_27824 R-NAT-1129208-3 A4A49_27824 [chloroplast envelope] R-NAT-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119402 Phospholipid biosynthesis I none Nicotiana attenuata A4A49_27832 R-NAT-1126053 A4A49_27832 [mitochondrial matrix] R-NAT-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119479 Valine degradation none Nicotiana attenuata A4A49_27847 R-NAT-5654797-2 A4A49_27847 [nucleoplasm] R-NAT-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654828 Strigolactone signaling none Nicotiana attenuata A4A49_27865 R-NAT-9916309 CPK3 [plasma membrane] R-NAT-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9916190 Root angle formation: elongation and curvature response none Nicotiana attenuata A4A49_27879 R-NAT-6787185-3 A4A49_27879 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_27887 R-NAT-5632315 A4A49_27887 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_27887 R-NAT-5632284 phospho-A4A49_27887 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_27887 R-NAT-5632342 phospho-A4A49_27887 [cytosol] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_27887 R-NAT-5632315 A4A49_27887 [nucleoplasm] R-NAT-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5679411 Gibberellin signaling none Nicotiana attenuata A4A49_27911 R-NAT-1130304 A4A49_27911 [cytosol] R-NAT-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119291 Nitrate assimilation none Nicotiana attenuata A4A49_27927 R-NAT-1128974 A4A49_27927 [cytosol] R-NAT-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119287 Vitamin E biosynthesis none Nicotiana attenuata A4A49_27927 R-NAT-1128974 A4A49_27927 [cytosol] R-NAT-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119506 tyrosine degradation I none Nicotiana attenuata A4A49_27936 R-NAT-9675365 A4A49_27936 [nucleoplasm] R-NAT-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675508 Root elongation none Nicotiana attenuata A4A49_27953 R-NAT-9035727 A4A49_27953 [cytosol] R-NAT-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9035605 Regulation of seed size none Nicotiana attenuata A4A49_27953 R-NAT-9035692 A4A49_27953 [nucleoplasm] R-NAT-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9035605 Regulation of seed size none Nicotiana attenuata A4A49_27961 R-NAT-1127695-2 A4A49_27961 [plastid stroma] R-NAT-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119430 Chorismate biosynthesis none Nicotiana attenuata A4A49_27985 R-NAT-4415007-4 A4A49_27985 [cytosol] R-NAT-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-3899351 Abscisic acid (ABA) mediated signaling none Nicotiana attenuata A4A49_27985 R-NAT-4415016-4 phospho-A4A49_27985 [cytosol] R-NAT-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-3899351 Abscisic acid (ABA) mediated signaling none Nicotiana attenuata A4A49_27985 R-NAT-4415007-4 A4A49_27985 [cytosol] R-NAT-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639861 Development of root hair none Nicotiana attenuata A4A49_28009 R-NAT-6786994 A4A49_28009 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_28048 R-NAT-1125187 A4A49_28048 [cytosol] R-NAT-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119276 Choline biosynthesis III none Nicotiana attenuata A4A49_28074 R-NAT-5632157 A4A49_28074 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_28074 R-NAT-5632157 A4A49_28074 [nucleoplasm] R-NAT-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654828 Strigolactone signaling none Nicotiana attenuata A4A49_28078 R-NAT-1125926 A4A49_28078 [cytosol] R-NAT-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119273 Lysine biosynthesis I none Nicotiana attenuata A4A49_28078 R-NAT-1125926 A4A49_28078 [cytosol] R-NAT-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119283 Lysine biosynthesis II none Nicotiana attenuata A4A49_28078 R-NAT-1125926 A4A49_28078 [cytosol] R-NAT-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119295 Homoserine biosynthesis none Nicotiana attenuata A4A49_28078 R-NAT-5606498 A4A49_28078 [plastid stroma] R-NAT-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119419 Lysine biosynthesis VI none Nicotiana attenuata A4A49_28157 R-NAT-1122295 A4A49_28157 [cytosol] R-NAT-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119353 Linear furanocoumarin biosynthesis none Nicotiana attenuata A4A49_28180 R-NAT-1129892 A4A49_28180 [cytosol] R-NAT-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119334 Ethylene biosynthesis from methionine none Nicotiana attenuata A4A49_28180 R-NAT-1129892 A4A49_28180 [cytosol] R-NAT-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119624 Methionine salvage pathway none Nicotiana attenuata A4A49_28189 R-NAT-1124959-2 A4A49_28189 [cytosol] R-NAT-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119623 Acyl-CoA synthetase pathway none Nicotiana attenuata A4A49_28211 R-NAT-1127574 A4A49_28211 [cytosol] R-NAT-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119465 Sucrose biosynthesis none Nicotiana attenuata A4A49_28225 R-NAT-1122974-3 A4A49_28225 [mitochondrial matrix] R-NAT-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119479 Valine degradation none Nicotiana attenuata A4A49_28286 R-NAT-9025463 A4A49_28286 [endoplasmic reticulum membrane] R-NAT-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119325 Sphingolipid metabolism none Nicotiana attenuata A4A49_28311 R-NAT-1128678 A4A49_28311 [cytosol] R-NAT-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119292 Cytokinins 7-N-glucoside biosynthesis none Nicotiana attenuata A4A49_28311 R-NAT-1128678 A4A49_28311 [cytosol] R-NAT-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119375 Cytokinins 9-N-glucoside biosynthesis none Nicotiana attenuata A4A49_28311 R-NAT-1128678 A4A49_28311 [cytosol] R-NAT-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119473 Cytokinins-O-glucoside biosynthesis none Nicotiana attenuata A4A49_28377 R-NAT-1124138 A4A49_28377 [cytosol] R-NAT-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119394 Pantothenate and coenzyme A biosynthesis III none Nicotiana attenuata A4A49_28446 R-NAT-1122601 A4A49_28446 [mitochondrial inner membrane] R-NAT-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119533 TCA cycle (plant) none Nicotiana attenuata A4A49_28489 R-NAT-9645872-2 A4A49_28489 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_28495 R-NAT-1129507 A4A49_28495 [cytosol] R-NAT-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119452 Galactose degradation II none Nicotiana attenuata A4A49_28569 R-NAT-1126387 A4A49_28569 [cytosol] R-NAT-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119295 Homoserine biosynthesis none Nicotiana attenuata A4A49_28644 R-NAT-9681910-3 A4A49_28644 [Golgi membrane] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_28733 R-NAT-1125766 A4A49_28733 [cytosol] R-NAT-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119557 GA12 biosynthesis none Nicotiana attenuata A4A49_28735 R-NAT-9826696-2 A4A49_28735 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_28766 R-NAT-9826609 A4A49_28766 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_28768 R-NAT-9640739 A4A49_28768 [nucleoplasm] R-NAT-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640887 G1/S transition none Nicotiana attenuata A4A49_28852 R-NAT-1126615 A4A49_28852 [cytosol] R-NAT-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119437 Glutathione redox reactions I none Nicotiana attenuata A4A49_28862 R-NAT-1122593 A4A49_28862 [cytosol] R-NAT-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119436 Peptidoglycan biosynthesis I none Nicotiana attenuata A4A49_28862 R-NAT-1122593 A4A49_28862 [cytosol] R-NAT-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119523 Tetrahydrofolate biosynthesis II none Nicotiana attenuata A4A49_28862 R-NAT-1122593 A4A49_28862 [cytosol] R-NAT-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119617 Folate polyglutamylation I none Nicotiana attenuata A4A49_28892 R-NAT-1124757 A4A49_28892 [cytosol] R-NAT-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119465 Sucrose biosynthesis none Nicotiana attenuata A4A49_28892 R-NAT-1124757 A4A49_28892 [cytosol] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_28904 R-NAT-1124234 A4A49_28904 [cytosol] R-NAT-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119436 Peptidoglycan biosynthesis I none Nicotiana attenuata A4A49_28969 R-NAT-9675354-2 A4A49_28969 [nucleoplasm] R-NAT-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675508 Root elongation none Nicotiana attenuata A4A49_28969 R-NAT-9675335 A4A49_28969 [mitochondrial matrix] R-NAT-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675508 Root elongation none Nicotiana attenuata A4A49_28978 R-NAT-8879029-2 DREB1G [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_28978 R-NAT-8879085-4 A4A49_28978 [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_28989 R-NAT-1123757 A4A49_28989 [cytosol] R-NAT-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119473 Cytokinins-O-glucoside biosynthesis none Nicotiana attenuata A4A49_29041 R-NAT-9682527 A4A49_29041 [cytosol] R-NAT-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119410 Ascorbate biosynthesis none Nicotiana attenuata A4A49_29064 R-NAT-8934251 A4A49_29064 [nucleoplasm] R-NAT-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8934036 Long day regulated expression of florigens none Nicotiana attenuata A4A49_29064 R-NAT-8934251 A4A49_29064 [nucleoplasm] R-NAT-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8934108 Short day regulated expression of florigens none Nicotiana attenuata A4A49_29102 R-NAT-8933759 A4A49_29102 [nucleoplasm] R-NAT-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8933811 Circadian rhythm none Nicotiana attenuata A4A49_29131 R-NAT-8879029 DREB1G [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_29131 R-NAT-8879085 A4A49_29131 [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_29131 R-NAT-8879050 CBF1 homolog [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_29132 R-NAT-8879029-5 DREB1G [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_29132 R-NAT-8879085-5 A4A49_29132 [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_29132 R-NAT-8879050-2 CBF1 homolog [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_29133 R-NAT-8879029-6 DREB1G [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_29133 R-NAT-8879085-6 A4A49_29133 [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_29133 R-NAT-8879050-3 CBF1 homolog [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_29171 R-NAT-5608161-3 A4A49_29171 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_29274 R-NAT-4752547 A4A49_29274 [plastid stroma] R-NAT-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119498 Phylloquinone biosynthesis none Nicotiana attenuata A4A49_29278 R-NAT-1128877 A4A49_29278 [plastid stroma] R-NAT-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119424 Plastid glycolysis none Nicotiana attenuata A4A49_29278 R-NAT-1128877 A4A49_29278 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_29329 R-NAT-1126034 A4A49_29329 [cytosol] R-NAT-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119534 Pyridoxal 5'-phosphate salvage pathway none Nicotiana attenuata A4A49_29329 R-NAT-1126034 A4A49_29329 [cytosol] R-NAT-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119594 Pyridoxal 5'-phosphate biosynthesis none Nicotiana attenuata A4A49_29346 R-NAT-1130327-7 A4A49_29346 [cytosol] R-NAT-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119586 Cyanate degradation none Nicotiana attenuata A4A49_29377 R-NAT-1128319 A4A49_29377 [cytosol] R-NAT-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119341 Galactosylcyclitol biosynthesis none Nicotiana attenuata A4A49_29383 R-NAT-1124598 A4A49_29383 [cytosol] R-NAT-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119300 Glycolipid desaturation none Nicotiana attenuata A4A49_29386 R-NAT-1122347-2 A4A49_29386 [cytosol] R-NAT-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119384 NAD biosynthesis I (from aspartate) none Nicotiana attenuata A4A49_29420 R-NAT-4827081-2 A4A49_29420 [plastid stroma] R-NAT-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-4827054 Tetrapyrrole biosynthesis I none Nicotiana attenuata A4A49_29424 R-NAT-1127353 A4A49_29424 [cytosol] R-NAT-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119506 tyrosine degradation I none Nicotiana attenuata A4A49_29431 R-NAT-1127599 A4A49_29431 [cytosol] R-NAT-1119388 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119388 IAA biosynthesis VI (via indole-3-acetamide) none Nicotiana attenuata A4A49_29441 R-NAT-1128641 A4A49_29441 [cytosol] R-NAT-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119331 Cysteine biosynthesis I none Nicotiana attenuata A4A49_29489 R-NAT-1128637 A4A49_29489 [chloroplast] R-NAT-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119494 Tryptophan biosynthesis none Nicotiana attenuata A4A49_29525 R-NAT-1130088 A4A49_29525 [plasma membrane] R-NAT-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119314 Cellulose biosynthesis none Nicotiana attenuata A4A49_29599 R-NAT-6788084 A4A49_29599 [nucleoplasm] R-NAT-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6788019 Salicylic acid signaling none Nicotiana attenuata A4A49_29600 R-NAT-1124095 A4A49_29600 [cytosol] R-NAT-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119452 Galactose degradation II none Nicotiana attenuata A4A49_29619 R-NAT-1125564-3 A4A49_29619 [cytosol] R-NAT-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119291 Nitrate assimilation none Nicotiana attenuata A4A49_29619 R-NAT-1125564-3 A4A49_29619 [cytosol] R-NAT-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119293 Glutamine biosynthesis I none Nicotiana attenuata A4A49_29619 R-NAT-1125564-3 A4A49_29619 [cytosol] R-NAT-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119443 Ammonia assimilation cycle none Nicotiana attenuata A4A49_29632 R-NAT-6787066-2 A4A49_29632 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_29646 R-NAT-1126554 A4A49_29646 [cytosol] R-NAT-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119452 Galactose degradation II none Nicotiana attenuata A4A49_29685 R-NAT-9025541-2 A4A49_29685 [endoplasmic reticulum membrane] R-NAT-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119325 Sphingolipid metabolism none Nicotiana attenuata A4A49_29739 R-NAT-5679470-3 A4A49_29739 [nucleoplasm] R-NAT-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5679411 Gibberellin signaling none Nicotiana attenuata A4A49_29852 R-NAT-9618186-2 A4A49_29852 [plant-type vacuole membrane] R-NAT-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9618218 Arsenic uptake and detoxification none Nicotiana attenuata A4A49_29992 R-NAT-1123575 A4A49_29992 [cytosol] R-NAT-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119297 Beta-alanine biosynthesis III none Nicotiana attenuata A4A49_30007 R-NAT-1123561 A4A49_30007 [cytosol] R-NAT-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119624 Methionine salvage pathway none Nicotiana attenuata A4A49_30040 R-NAT-1128337 A4A49_30040 [plastid stroma] R-NAT-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119308 Momilactone biosynthesis none Nicotiana attenuata A4A49_30040 R-NAT-1128244 A4A49_30040 [chloroplast] R-NAT-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119348 Ent-kaurene biosynthesis none Nicotiana attenuata A4A49_30044 R-NAT-9675481-2 A4A49_30044 [cytosol] R-NAT-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030654 Primary root development none Nicotiana attenuata A4A49_30058 R-NAT-9675851-2 A4A49_30058 [nucleoplasm] R-NAT-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675815 Leading strand synthesis none Nicotiana attenuata A4A49_30135 R-NAT-1127738-2 A4A49_30135 [cytosol] R-NAT-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119273 Lysine biosynthesis I none Nicotiana attenuata A4A49_30135 R-NAT-1127738-2 A4A49_30135 [cytosol] R-NAT-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119283 Lysine biosynthesis II none Nicotiana attenuata A4A49_30135 R-NAT-5606514-2 A4A49_30135 [plastid stroma] R-NAT-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119419 Lysine biosynthesis VI none Nicotiana attenuata A4A49_30165 R-NAT-5655007-4 A4A49_30165 [Golgi lumen] R-NAT-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5655010 Xylogalacturonan biosynthesis none Nicotiana attenuata A4A49_30172 R-NAT-9826692-3 A4A49_30172 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_30221 R-NAT-1126799 A4A49_30221 [cytosol] R-NAT-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119428 GDP-D-rhamnose biosynthesis none Nicotiana attenuata A4A49_30221 R-NAT-1126799 A4A49_30221 [cytosol] R-NAT-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119563 UDP-D-xylose biosynthesis none Nicotiana attenuata A4A49_30221 R-NAT-1126799 A4A49_30221 [cytosol] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_30287 R-NAT-1127899-3 A4A49_30287 [cytosol] R-NAT-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119370 Sterol biosynthesis none Nicotiana attenuata A4A49_30367 R-NAT-1130456 A4A49_30367 [plastid stroma] R-NAT-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119430 Chorismate biosynthesis none Nicotiana attenuata A4A49_30373 R-NAT-1123717 A4A49_30373 [cytosol] R-NAT-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119395 Maackiain biosynthesis none Nicotiana attenuata A4A49_30373 R-NAT-1123717 A4A49_30373 [cytosol] R-NAT-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119453 Medicarpin biosynthesis none Nicotiana attenuata A4A49_30375 R-NAT-1123717-3 A4A49_30375 [cytosol] R-NAT-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119395 Maackiain biosynthesis none Nicotiana attenuata A4A49_30375 R-NAT-1123717-3 A4A49_30375 [cytosol] R-NAT-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119453 Medicarpin biosynthesis none Nicotiana attenuata A4A49_30415 R-NAT-1128173 A4A49_30415 [cytosol] R-NAT-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119437 Glutathione redox reactions I none Nicotiana attenuata A4A49_30461 R-NAT-1127031-4 A4A49_30461 [cytosol] R-NAT-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119460 Isoleucine biosynthesis from threonine none Nicotiana attenuata A4A49_30481 R-NAT-9675500 A4A49_30481 [endoplasmic reticulum membrane] R-NAT-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030654 Primary root development none Nicotiana attenuata A4A49_30485 R-NAT-1124598-5 A4A49_30485 [cytosol] R-NAT-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119300 Glycolipid desaturation none Nicotiana attenuata A4A49_30505 R-NAT-1125489-4 A4A49_30505 [Golgi membrane] R-NAT-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119428 GDP-D-rhamnose biosynthesis none Nicotiana attenuata A4A49_30505 R-NAT-1127743-4 A4A49_30505 [cytosol] R-NAT-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119428 GDP-D-rhamnose biosynthesis none Nicotiana attenuata A4A49_30505 R-NAT-1125489-4 A4A49_30505 [Golgi membrane] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_30505 R-NAT-1125489-4 A4A49_30505 [Golgi membrane] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_30505 R-NAT-1127743-4 A4A49_30505 [cytosol] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_30509 R-NAT-9826680-4 A4A49_30509 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_30624 R-NAT-1124453 A4A49_30624 [peroxisomal matrix] R-NAT-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119407 Ureide biosynthesis none Nicotiana attenuata A4A49_30641 R-NAT-6787093-4 A4A49_30641 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_30642 R-NAT-6787093-3 A4A49_30642 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_30648 R-NAT-1122849 A4A49_30648 [mitochondrion] R-NAT-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119506 tyrosine degradation I none Nicotiana attenuata A4A49_30711 R-NAT-9826609-2 A4A49_30711 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_30713 R-NAT-1128798 A4A49_30713 [cytosol] R-NAT-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119331 Cysteine biosynthesis I none Nicotiana attenuata A4A49_30746 R-NAT-9658563 A4A49_30746 [endoplasmic reticulum lumen] R-NAT-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119502 Allantoin degradation none Nicotiana attenuata A4A49_30756 R-NAT-9675820 A4A49_30756 [nucleoplasm] R-NAT-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675824 DNA replication Initiation none Nicotiana attenuata A4A49_30831 R-NAT-1125014 A4A49_30831 [cytosol] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_30862 R-NAT-8879029-8 DREB1G [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_30862 R-NAT-8879085-8 A4A49_30862 [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_30940 R-NAT-2730728 A4A49_30940 [cytosol] R-NAT-1119413 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119413 Trans-zeatin biosynthesis none Nicotiana attenuata A4A49_30961 R-NAT-9924379-2 HSFA2D [nucleoplasm] R-NAT-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924451 Shoot (tiller) formation and regulation of tiller angle none Nicotiana attenuata A4A49_31022 R-NAT-1126344 A4A49_31022 [plastid stroma] R-NAT-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119529 Sulfate activation for sulfonation none Nicotiana attenuata A4A49_31037 R-NAT-9918274 SBE1 [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_31037 R-NAT-9626342 A4A49_31037 [plastid stroma] R-NAT-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9626305 Regulatory network of nutrient accumulation none Nicotiana attenuata A4A49_31080 R-NAT-5654756 A4A49_31080 [cytosol] R-NAT-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119281 Aspartate biosynthesis I none Nicotiana attenuata A4A49_31080 R-NAT-1123648 A4A49_31080 [plastid] R-NAT-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119506 tyrosine degradation I none Nicotiana attenuata A4A49_31080 R-NAT-5631992 A4A49_31080 [plastid stroma] R-NAT-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119553 Asparagine biosynthesis none Nicotiana attenuata A4A49_31111 R-NAT-9607149 A4A49_31111 [plasma membrane] R-NAT-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9607185 Generation of superoxide radicals none Nicotiana attenuata A4A49_31111 R-NAT-9607094 phospho-A4A49_31111 [plasma membrane] R-NAT-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9607185 Generation of superoxide radicals none Nicotiana attenuata A4A49_31111 R-NAT-9607132 RBOHB [plasma membrane] R-NAT-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9611432 Recognition of fungal and bacterial pathogens and immunity response none Nicotiana attenuata A4A49_31111 R-NAT-9611529 phospho-phosphorylated-RBOHB [plasma membrane] R-NAT-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9611432 Recognition of fungal and bacterial pathogens and immunity response none Nicotiana attenuata A4A49_31120 R-NAT-9930304 ACA7 [plasma membrane] R-NAT-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9766881 TF network involved in salinity response none Nicotiana attenuata A4A49_31124 R-NAT-9025331 A4A49_31124 [cytosol] R-NAT-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119402 Phospholipid biosynthesis I none Nicotiana attenuata A4A49_31149 R-NAT-1127705 A4A49_31149 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_31213 R-NAT-1130327-11 A4A49_31213 [cytosol] R-NAT-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119586 Cyanate degradation none Nicotiana attenuata A4A49_31242 R-NAT-1127173-2 A4A49_31242 [cytosol] R-NAT-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119540 Leucine biosynthesis none Nicotiana attenuata A4A49_31310 R-NAT-1124809-2 A4A49_31310 [cytosol] R-NAT-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119486 IAA biosynthesis I none Nicotiana attenuata A4A49_31384 R-NAT-9826647-3 A4A49_31384 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_31393 R-NAT-8987448 A4A49_31393 [peroxisomal matrix] R-NAT-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119312 Photorespiration none Nicotiana attenuata A4A49_31403 R-NAT-1125804 A4A49_31403 [cytosol] R-NAT-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119300 Glycolipid desaturation none Nicotiana attenuata A4A49_31432 R-NAT-1130059-3 A4A49_31432 [cytosol] R-NAT-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119262 Threonine biosynthesis from homoserine none Nicotiana attenuata A4A49_31437 R-NAT-1129390 A4A49_31437 [mitochondrion] R-NAT-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119506 tyrosine degradation I none Nicotiana attenuata A4A49_31534 R-NAT-9607102-2 A4A49_31534 [mitochondrion] R-NAT-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9607185 Generation of superoxide radicals none Nicotiana attenuata A4A49_31581 R-NAT-1129561-2 A4A49_31581 [cytosol] R-NAT-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119452 Galactose degradation II none Nicotiana attenuata A4A49_31581 R-NAT-1129561-2 A4A49_31581 [cytosol] R-NAT-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119465 Sucrose biosynthesis none Nicotiana attenuata A4A49_31631 R-NAT-1129964-2 A4A49_31631 [cytosol] R-NAT-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119378 Myo-inositol biosynthesis none Nicotiana attenuata A4A49_31631 R-NAT-1129964-2 A4A49_31631 [cytosol] R-NAT-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119434 Phytic acid biosynthesis (lipid-independent) none Nicotiana attenuata A4A49_31641 R-NAT-9826654-2 A4A49_31641 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_31644 R-NAT-1130210 A4A49_31644 [cytosol] R-NAT-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119586 Cyanate degradation none Nicotiana attenuata A4A49_31719 R-NAT-4415060-2 A4A49_31719 [plasma membrane] R-NAT-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-3899351 Abscisic acid (ABA) mediated signaling none Nicotiana attenuata A4A49_31719 R-NAT-4415065-2 phospho-A4A49_31719 [plasma membrane] R-NAT-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-3899351 Abscisic acid (ABA) mediated signaling none Nicotiana attenuata A4A49_31725 R-NAT-9626337 A4A49_31725 [Golgi-associated vesicle] R-NAT-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9626305 Regulatory network of nutrient accumulation none Nicotiana attenuata A4A49_31757 R-NAT-8879027-2 A4A49_31757 [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_31760 R-NAT-9640729 A4A49_31760 [nucleoplasm] R-NAT-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640760 G1 phase none Nicotiana attenuata A4A49_31760 R-NAT-9640729 A4A49_31760 [nucleoplasm] R-NAT-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640887 G1/S transition none Nicotiana attenuata A4A49_31763 R-NAT-1128328-2 A4A49_31763 [cytosol] R-NAT-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119615 Mevalonate pathway none Nicotiana attenuata A4A49_31769 R-NAT-8879029-4 DREB1G [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_31769 R-NAT-8879085-9 A4A49_31769 [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_31897 R-NAT-1123211 A4A49_31897 [cytosol] R-NAT-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Nicotiana attenuata A4A49_31897 R-NAT-1123211 A4A49_31897 [cytosol] R-NAT-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119370 Sterol biosynthesis none Nicotiana attenuata A4A49_31897 R-NAT-1123211 A4A49_31897 [cytosol] R-NAT-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119439 Cholesterol biosynthesis III (via desmosterol) none Nicotiana attenuata A4A49_31897 R-NAT-1123211 A4A49_31897 [cytosol] R-NAT-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119559 Cholesterol biosynthesis I none Nicotiana attenuata A4A49_31903 R-NAT-9639789 A4A49_31903 [plasma membrane] R-NAT-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639861 Development of root hair none Nicotiana attenuata A4A49_31930 R-NAT-8987574 A4A49_31930 [mitochondrial matrix] R-NAT-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119311 Glycine biosynthesis I none Nicotiana attenuata A4A49_31974 R-NAT-1250418-2 A4A49_31974 [cytosol] R-NAT-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119374 Abscisic acid biosynthesis none Nicotiana attenuata A4A49_31974 R-NAT-1129637 A4A49_31974 [cytosol] R-NAT-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119486 IAA biosynthesis I none Nicotiana attenuata A4A49_31983 R-NAT-9640689 A4A49_31983 [nucleoplasm] R-NAT-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675782 Maturation none Nicotiana attenuata A4A49_31983 R-NAT-9640689 A4A49_31983 [nucleoplasm] R-NAT-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675815 Leading strand synthesis none Nicotiana attenuata A4A49_31983 R-NAT-9640689 A4A49_31983 [nucleoplasm] R-NAT-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675885 Lagging strand synthesis none Nicotiana attenuata A4A49_31994 R-NAT-1126799-2 A4A49_31994 [cytosol] R-NAT-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119428 GDP-D-rhamnose biosynthesis none Nicotiana attenuata A4A49_31994 R-NAT-1126799-2 A4A49_31994 [cytosol] R-NAT-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119563 UDP-D-xylose biosynthesis none Nicotiana attenuata A4A49_31994 R-NAT-1126799-2 A4A49_31994 [cytosol] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_32033 R-NAT-1129569 A4A49_32033 [cytosol] R-NAT-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119379 Flavin biosynthesis none Nicotiana attenuata A4A49_32073 R-NAT-5608140 A4A49_32073 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_32083 R-NAT-9826682 A4A49_32083 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_32086 R-NAT-9920344-3 A4A49_32086 [nucleoplasm] R-NAT-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8934108 Short day regulated expression of florigens none Nicotiana attenuata A4A49_32102 R-NAT-5608213 A4A49_32102 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_32106 R-NAT-1124935 A4A49_32106 [cytosol] R-NAT-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119349 S-methylmethionine cycle none Nicotiana attenuata A4A49_32142 R-NAT-1128534 A4A49_32142 [cytosol] R-NAT-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119437 Glutathione redox reactions I none Nicotiana attenuata A4A49_32162 R-NAT-1127414 A4A49_32162 [cytosol] R-NAT-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119265 Tetrahydrofolate biosynthesis I none Nicotiana attenuata A4A49_32174 R-NAT-1123433 A4A49_32174 [cytosol] R-NAT-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119332 Jasmonic acid biosynthesis none Nicotiana attenuata A4A49_32174 R-NAT-1123433 A4A49_32174 [cytosol] R-NAT-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119618 13-LOX and 13-HPL pathway none Nicotiana attenuata A4A49_32246 R-NAT-8933728-2 A4A49_32246 [nucleoplasm] R-NAT-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8933811 Circadian rhythm none Nicotiana attenuata A4A49_32289 R-NAT-9608694 A4A49_32289 [cytosol] R-NAT-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9928831 Severe drought none Nicotiana attenuata A4A49_32289 R-NAT-9928774 A4A49_32289 [nucleoplasm] R-NAT-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9928831 Severe drought none Nicotiana attenuata A4A49_32358 R-NAT-9675399-2 A4A49_32358 [nucleoplasm] R-NAT-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030654 Primary root development none Nicotiana attenuata A4A49_32383 R-NAT-6787185 A4A49_32383 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_32384 R-NAT-6787185-2 A4A49_32384 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_32435 R-NAT-9639957-2 A4A49_32435 [plasma membrane] R-NAT-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639861 Development of root hair none Nicotiana attenuata A4A49_32478 R-NAT-9920304 A4A49_32478 [nucleoplasm] R-NAT-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8934036 Long day regulated expression of florigens none Nicotiana attenuata A4A49_32485 R-NAT-9640671-3 A4A49_32485 [nucleoplasm] R-NAT-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640760 G1 phase none Nicotiana attenuata A4A49_32485 R-NAT-9640671-3 A4A49_32485 [nucleoplasm] R-NAT-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640887 G1/S transition none Nicotiana attenuata A4A49_32526 R-NAT-1124786 A4A49_32526 [cytosol] R-NAT-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119276 Choline biosynthesis III none Nicotiana attenuata A4A49_32574 R-NAT-6788172-3 A4A49_32574 [nucleoplasm] R-NAT-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6788019 Salicylic acid signaling none Nicotiana attenuata A4A49_32622 R-NAT-1127065 A4A49_32622 [cytosol] R-NAT-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119304 Putrescine biosynthesis II none Nicotiana attenuata A4A49_32754 R-NAT-9826604-3 A4A49_32754 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_32812 R-NAT-1126830-2 A4A49_32812 [mitochondrial matrix] R-NAT-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119533 TCA cycle (plant) none Nicotiana attenuata A4A49_32830 R-NAT-9612399-2 A4A49_32830 [peroxisomal matrix] R-NAT-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119612 Cysteine degradation none Nicotiana attenuata A4A49_32830 R-NAT-9612380-2 A4A49_32830 [cytosol] R-NAT-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119612 Cysteine degradation none Nicotiana attenuata A4A49_32909 R-NAT-5632261 A4A49_32909 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_32967 R-NAT-1122605 A4A49_32967 [cytosol] R-NAT-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119341 Galactosylcyclitol biosynthesis none Nicotiana attenuata A4A49_32988 R-NAT-3321270-2 A4A49_32988 [chloroplast inner membrane] R-NAT-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119287 Vitamin E biosynthesis none Nicotiana attenuata A4A49_33005 R-NAT-9658613 A4A49_33005 [plastid stroma] R-NAT-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119263 Arginine biosynthesis none Nicotiana attenuata A4A49_33005 R-NAT-9658613 A4A49_33005 [plastid stroma] R-NAT-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119622 Arginine biosynthesis II (acetyl cycle) none Nicotiana attenuata A4A49_33037 R-NAT-1125910-3 A4A49_33037 [plastid stroma] R-NAT-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119367 Polyisoprenoid biosynthesis none Nicotiana attenuata A4A49_33043 R-NAT-5633387-3 A4A49_33043 [mitochondrial matrix] R-NAT-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119445 Beta-alanine biosynthesis II none Nicotiana attenuata A4A49_33105 R-NAT-1126560-2 A4A49_33105 [cytosol] R-NAT-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119516 Trehalose biosynthesis I none Nicotiana attenuata A4A49_33164 R-NAT-1122892-3 A4A49_33164 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_33164 R-NAT-1122892-3 A4A49_33164 [nucleoplasm] R-NAT-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030557 Lateral root initiation none Nicotiana attenuata A4A49_33164 R-NAT-1122892-3 A4A49_33164 [nucleoplasm] R-NAT-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030654 Primary root development none Nicotiana attenuata A4A49_33168 R-NAT-9918273 A4A49_33168 [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_33168 R-NAT-9626376 A4A49_33168 [plastid stroma] R-NAT-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9626305 Regulatory network of nutrient accumulation none Nicotiana attenuata A4A49_33173 R-NAT-9640761 A4A49_33173 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_33173 R-NAT-9640761 A4A49_33173 [nucleoplasm] R-NAT-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675824 DNA replication Initiation none Nicotiana attenuata A4A49_33175 R-NAT-8868866-3 A4A49_33175 [endoplasmic reticulum membrane] R-NAT-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8868949 Intracellular auxin transport none Nicotiana attenuata A4A49_33216 R-NAT-1130327-4 A4A49_33216 [cytosol] R-NAT-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119586 Cyanate degradation none Nicotiana attenuata A4A49_33268 R-NAT-6787863-2 A4A49_33268 [nucleoplasm] R-NAT-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6788019 Salicylic acid signaling none Nicotiana attenuata A4A49_33271 R-NAT-1124206 A4A49_33271 [cytosol] R-NAT-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119403 Removal of superoxide radicals none Nicotiana attenuata A4A49_33271 R-NAT-1124206 A4A49_33271 [cytosol] R-NAT-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9611432 Recognition of fungal and bacterial pathogens and immunity response none Nicotiana attenuata A4A49_33272 R-NAT-1127467-2 A4A49_33272 [cytosol] R-NAT-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119456 Brassinosteroid biosynthesis II none Nicotiana attenuata A4A49_33330 R-NAT-5632192 A4A49_33330 [cytosol] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_33343 R-NAT-5632157-2 A4A49_33343 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_33343 R-NAT-5632157-2 A4A49_33343 [nucleoplasm] R-NAT-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654828 Strigolactone signaling none Nicotiana attenuata A4A49_33365 R-NAT-1125556-2 A4A49_33365 [cytosol] R-NAT-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119410 Ascorbate biosynthesis none Nicotiana attenuata A4A49_33365 R-NAT-1125556-2 A4A49_33365 [cytosol] R-NAT-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119628 GDP-mannose metabolism none Nicotiana attenuata A4A49_33367 R-NAT-1125670 A4A49_33367 [cytosol] R-NAT-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119393 Asparagine degradation I none Nicotiana attenuata A4A49_33371 R-NAT-8933710-2 A4A49_33371 [nucleoplasm] R-NAT-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8933811 Circadian rhythm none Nicotiana attenuata A4A49_33389 R-NAT-8854102 A4A49_33389 [cytosol] R-NAT-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119556 Choline biosynthesis I none Nicotiana attenuata A4A49_33408 R-NAT-2960195 A4A49_33408 [cytosol] R-NAT-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119410 Ascorbate biosynthesis none Nicotiana attenuata A4A49_33408 R-NAT-2960195 A4A49_33408 [cytosol] R-NAT-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119570 Cytosolic glycolysis none Nicotiana attenuata A4A49_33592 R-NAT-9608694-2 A4A49_33592 [cytosol] R-NAT-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9928831 Severe drought none Nicotiana attenuata A4A49_33592 R-NAT-9928774-2 A4A49_33592 [nucleoplasm] R-NAT-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9928831 Severe drought none Nicotiana attenuata A4A49_33754 R-NAT-1125417 A4A49_33754 [cytosol] R-NAT-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119265 Tetrahydrofolate biosynthesis I none Nicotiana attenuata A4A49_33754 R-NAT-1125417 A4A49_33754 [cytosol] R-NAT-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119523 Tetrahydrofolate biosynthesis II none Nicotiana attenuata A4A49_33810 R-NAT-1123250 A4A49_33810 [cytosol] R-NAT-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119265 Tetrahydrofolate biosynthesis I none Nicotiana attenuata A4A49_33810 R-NAT-1123250 A4A49_33810 [cytosol] R-NAT-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119523 Tetrahydrofolate biosynthesis II none Nicotiana attenuata A4A49_33823 R-NAT-8868904 A4A49_33823 [endoplasmic reticulum membrane] R-NAT-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8868949 Intracellular auxin transport none Nicotiana attenuata A4A49_33834 R-NAT-9035593 A4A49_33834 [cytosol] R-NAT-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9035605 Regulation of seed size none Nicotiana attenuata A4A49_33834 R-NAT-9035634 A4A49_33834 [nucleoplasm] R-NAT-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9035605 Regulation of seed size none Nicotiana attenuata A4A49_33834 R-NAT-9035593 A4A49_33834 [cytosol] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_33834 R-NAT-9035634 A4A49_33834 [nucleoplasm] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_33868 R-NAT-9025513 A4A49_33868 [endoplasmic reticulum membrane] R-NAT-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119325 Sphingolipid metabolism none Nicotiana attenuata A4A49_33868 R-NAT-1129700 A4A49_33868 [cytosol] R-NAT-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119610 Biotin biosynthesis II none Nicotiana attenuata A4A49_33872 R-NAT-9026148-2 A4A49_33872 [mitochondrion] R-NAT-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119458 Glutamate degradation none Nicotiana attenuata A4A49_33872 R-NAT-1130288-2 A4A49_33872 [cytosol] R-NAT-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119610 Biotin biosynthesis II none Nicotiana attenuata A4A49_33875 R-NAT-9924407 EXPB5 [basolateral plasma membrane] R-NAT-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924451 Shoot (tiller) formation and regulation of tiller angle none Nicotiana attenuata A4A49_33884 R-NAT-9640777 A4A49_33884 [nucleoplasm] R-NAT-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640760 G1 phase none Nicotiana attenuata A4A49_33884 R-NAT-9640777 A4A49_33884 [nucleoplasm] R-NAT-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640887 G1/S transition none Nicotiana attenuata A4A49_33886 R-NAT-5632192-2 A4A49_33886 [cytosol] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_33903 R-NAT-1127523-2 A4A49_33903 [cytosol] R-NAT-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Nicotiana attenuata A4A49_33992 R-NAT-8933766 A4A49_33992 [nucleoplasm] R-NAT-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8933811 Circadian rhythm none Nicotiana attenuata A4A49_33993 R-NAT-1130088-2 A4A49_33993 [plasma membrane] R-NAT-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119314 Cellulose biosynthesis none Nicotiana attenuata A4A49_34059 R-NAT-9626474 A4A49_34059 [trans-Golgi network membrane] R-NAT-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9626305 Regulatory network of nutrient accumulation none Nicotiana attenuata A4A49_34080 R-NAT-1129867 A4A49_34080 [chloroplast] R-NAT-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119494 Tryptophan biosynthesis none Nicotiana attenuata A4A49_34098 R-NAT-8868994 A4A49_34098 [endoplasmic reticulum membrane] R-NAT-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8868949 Intracellular auxin transport none Nicotiana attenuata A4A49_34121 R-NAT-5679376-2 A4A49_34121 [nucleoplasm] R-NAT-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5679411 Gibberellin signaling none Nicotiana attenuata A4A49_34131 R-NAT-8987548-2 A4A49_34131 [peroxisomal matrix] R-NAT-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119312 Photorespiration none Nicotiana attenuata A4A49_34225 R-NAT-9681886-5 A4A49_34225 [cytosol] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_34284 R-NAT-1127523-4 A4A49_34284 [cytosol] R-NAT-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Nicotiana attenuata A4A49_34371 R-NAT-1125584 A4A49_34371 [plastid stroma] R-NAT-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119509 Histidine biosynthesis I none Nicotiana attenuata A4A49_34390 R-NAT-1130101 A4A49_34390 [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_34411 R-NAT-1128069-2 A4A49_34411 [cytosol] R-NAT-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Nicotiana attenuata A4A49_34411 R-NAT-1128069-2 A4A49_34411 [cytosol] R-NAT-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Nicotiana attenuata A4A49_34447 R-NAT-1130327-6 A4A49_34447 [cytosol] R-NAT-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119586 Cyanate degradation none Nicotiana attenuata A4A49_34489 R-NAT-1127526 A4A49_34489 [cytosol] R-NAT-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119332 Jasmonic acid biosynthesis none Nicotiana attenuata A4A49_34502 R-NAT-6786999 A4A49_34502 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_34514 R-NAT-1129282 A4A49_34514 [cytosol] R-NAT-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119428 GDP-D-rhamnose biosynthesis none Nicotiana attenuata A4A49_34514 R-NAT-1129282 A4A49_34514 [cytosol] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_34542 R-NAT-8986682-3 A4A49_34542 [extracellular region] R-NAT-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8986768 Anther and pollen development none Nicotiana attenuata A4A49_34595 R-NAT-9607102-3 A4A49_34595 [mitochondrion] R-NAT-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9607185 Generation of superoxide radicals none Nicotiana attenuata A4A49_34596 R-NAT-1128200-2 A4A49_34596 [cytosol] R-NAT-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119316 Phenylpropanoid biosynthesis none Nicotiana attenuata A4A49_34600 R-NAT-9612406 A4A49_34600 [mitochondrial matrix] R-NAT-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119612 Cysteine degradation none Nicotiana attenuata A4A49_34604 R-NAT-1127082 A4A49_34604 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_34629 R-NAT-1130152-2 A4A49_34629 [cytosol] R-NAT-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119394 Pantothenate and coenzyme A biosynthesis III none Nicotiana attenuata A4A49_34643 R-NAT-9639088 A4A49_34643 [plasma membrane] R-NAT-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639136 Response to Aluminum stress none Nicotiana attenuata A4A49_34649 R-NAT-9658643 A4A49_34649 [cytosol] R-NAT-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119567 Beta-alanine biosynthesis I none Nicotiana attenuata A4A49_34705 R-NAT-1124145 A4A49_34705 [mitochondrial matrix] R-NAT-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119445 Beta-alanine biosynthesis II none Nicotiana attenuata A4A49_34772 R-NAT-1125989 A4A49_34772 [cytosol] R-NAT-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119438 Secologanin and strictosidine biosynthesis none Nicotiana attenuata A4A49_34781 R-NAT-9675866 A4A49_34781 [nucleoplasm] R-NAT-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675782 Maturation none Nicotiana attenuata A4A49_34781 R-NAT-9675866 A4A49_34781 [nucleoplasm] R-NAT-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675815 Leading strand synthesis none Nicotiana attenuata A4A49_34781 R-NAT-9675866 A4A49_34781 [nucleoplasm] R-NAT-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675885 Lagging strand synthesis none Nicotiana attenuata A4A49_34845 R-NAT-5608161-2 A4A49_34845 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_34847 R-NAT-1127928 A4A49_34847 [cytosol] R-NAT-1119595 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119595 Mannose degradation none Nicotiana attenuata A4A49_34847 R-NAT-1127928 A4A49_34847 [cytosol] R-NAT-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119601 Trehalose degradation II none Nicotiana attenuata A4A49_34847 R-NAT-1127928 A4A49_34847 [cytosol] R-NAT-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119628 GDP-mannose metabolism none Nicotiana attenuata A4A49_34849 R-NAT-1123943 A4A49_34849 [plastid] R-NAT-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119365 Lysine degradation II none Nicotiana attenuata A4A49_34874 R-NAT-9924558 NCED1 [plastid] R-NAT-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Nicotiana attenuata A4A49_34895 R-NAT-9611864 A4A49_34895 [mitochondrial matrix] R-NAT-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119479 Valine degradation none Nicotiana attenuata A4A49_34923 R-NAT-1123895 A4A49_34923 [cytosol] R-NAT-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119334 Ethylene biosynthesis from methionine none Nicotiana attenuata A4A49_34923 R-NAT-1123895 A4A49_34923 [cytosol] R-NAT-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119624 Methionine salvage pathway none Nicotiana attenuata A4A49_34972 R-NAT-9645947 A4A49_34972 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_34972 R-NAT-9645947 A4A49_34972 [nucleoplasm] R-NAT-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675782 Maturation none Nicotiana attenuata A4A49_34972 R-NAT-9645947 A4A49_34972 [nucleoplasm] R-NAT-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675815 Leading strand synthesis none Nicotiana attenuata A4A49_34972 R-NAT-9645947 A4A49_34972 [nucleoplasm] R-NAT-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675824 DNA replication Initiation none Nicotiana attenuata A4A49_34972 R-NAT-9645947 A4A49_34972 [nucleoplasm] R-NAT-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675885 Lagging strand synthesis none Nicotiana attenuata A4A49_35089 R-NAT-1125910-2 A4A49_35089 [plastid stroma] R-NAT-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119367 Polyisoprenoid biosynthesis none Nicotiana attenuata A4A49_35114 R-NAT-1128613-2 A4A49_35114 [cytosol] R-NAT-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119316 Phenylpropanoid biosynthesis none Nicotiana attenuata A4A49_35185 R-NAT-5654957-2 A4A49_35185 [Golgi lumen] R-NAT-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654909 Xylan biosynthesis none Nicotiana attenuata A4A49_35196 R-NAT-1123534 A4A49_35196 [cytosol] R-NAT-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119438 Secologanin and strictosidine biosynthesis none Nicotiana attenuata A4A49_35199 R-NAT-1127815 A4A49_35199 [cytosol] R-NAT-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119450 Homocysteine biosynthesis none Nicotiana attenuata A4A49_35200 R-NAT-1127815-3 A4A49_35200 [cytosol] R-NAT-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119450 Homocysteine biosynthesis none Nicotiana attenuata A4A49_35214 R-NAT-5632264-2 A4A49_35214 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_35248 R-NAT-9618171 A4A49_35248 [plasma membrane] R-NAT-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9618218 Arsenic uptake and detoxification none Nicotiana attenuata A4A49_35263 R-NAT-2685730 A4A49_35263 [cytosol] R-NAT-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119580 IAA biosynthesis II none Nicotiana attenuata A4A49_35355 R-NAT-1128906 A4A49_35355 [cytosol] R-NAT-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119444 Canavanine biosynthesis none Nicotiana attenuata A4A49_35359 R-NAT-2885386 A4A49_35359 [cytosol] R-NAT-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119417 Stachyose biosynthesis none Nicotiana attenuata A4A49_35386 R-NAT-9826667-2 A4A49_35386 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_35408 R-NAT-9640777-4 A4A49_35408 [nucleoplasm] R-NAT-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640760 G1 phase none Nicotiana attenuata A4A49_35408 R-NAT-9640777-4 A4A49_35408 [nucleoplasm] R-NAT-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640887 G1/S transition none Nicotiana attenuata A4A49_35474 R-NAT-5146760 A4A49_35474 [mitochondrial matrix] R-NAT-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119533 TCA cycle (plant) none Nicotiana attenuata A4A49_35497 R-NAT-1125834 A4A49_35497 [cytosol] R-NAT-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119379 Flavin biosynthesis none Nicotiana attenuata A4A49_35541 R-NAT-9658611 A4A49_35541 [plastid stroma] R-NAT-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119263 Arginine biosynthesis none Nicotiana attenuata A4A49_35541 R-NAT-9658611 A4A49_35541 [plastid stroma] R-NAT-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119539 Ornithine biosynthesis none Nicotiana attenuata A4A49_35541 R-NAT-9658611 A4A49_35541 [plastid stroma] R-NAT-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119622 Arginine biosynthesis II (acetyl cycle) none Nicotiana attenuata A4A49_35547 R-NAT-1129585 A4A49_35547 [cytosol] R-NAT-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119265 Tetrahydrofolate biosynthesis I none Nicotiana attenuata A4A49_35547 R-NAT-1129585 A4A49_35547 [cytosol] R-NAT-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119523 Tetrahydrofolate biosynthesis II none Nicotiana attenuata A4A49_35616 R-NAT-1129859 A4A49_35616 [chloroplast stroma] R-NAT-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119443 Ammonia assimilation cycle none Nicotiana attenuata A4A49_35616 R-NAT-5606382 A4A49_35616 [plastid stroma] R-NAT-1119535 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119535 Glutamate biosynthesis IV none Nicotiana attenuata A4A49_35685 R-NAT-9928771-2 A4A49_35685 [nucleoplasm] R-NAT-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9928831 Severe drought none Nicotiana attenuata A4A49_35707 R-NAT-1130006 A4A49_35707 [plastid stroma] R-NAT-1119569 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119569 Kievitone biosynthesis none Nicotiana attenuata A4A49_35770 R-NAT-1129113 A4A49_35770 [cytosol] R-NAT-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119298 Glutathione redox reactions II none Nicotiana attenuata A4A49_35770 R-NAT-1129113 A4A49_35770 [cytosol] R-NAT-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119437 Glutathione redox reactions I none Nicotiana attenuata A4A49_35790 R-NAT-1125447 A4A49_35790 [plastid stroma] R-NAT-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119509 Histidine biosynthesis I none Nicotiana attenuata A4A49_35810 R-NAT-5608169-2 A4A49_35810 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_35820 R-NAT-9640671 A4A49_35820 [nucleoplasm] R-NAT-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640760 G1 phase none Nicotiana attenuata A4A49_35820 R-NAT-9640671 A4A49_35820 [nucleoplasm] R-NAT-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640887 G1/S transition none Nicotiana attenuata A4A49_35828 R-NAT-9675439-2 A4A49_35828 [mitochondrial matrix] R-NAT-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030654 Primary root development none Nicotiana attenuata A4A49_35829 R-NAT-9675439 A4A49_35829 [mitochondrial matrix] R-NAT-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030654 Primary root development none Nicotiana attenuata A4A49_35874 R-NAT-1129507-2 A4A49_35874 [cytosol] R-NAT-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119452 Galactose degradation II none Nicotiana attenuata A4A49_35901 R-NAT-8854121-7 A4A49_35901 [cytosol] R-NAT-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119556 Choline biosynthesis I none Nicotiana attenuata A4A49_35910 R-NAT-6787202-2 A4A49_35910 [cytosol] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_35959 R-NAT-5146758-2 A4A49_35959 [mitochondrial matrix] R-NAT-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119533 TCA cycle (plant) none Nicotiana attenuata A4A49_35999 R-NAT-5654827 A4A49_35999 [nucleoplasm] R-NAT-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654828 Strigolactone signaling none Nicotiana attenuata A4A49_36030 R-NAT-5632120 A4A49_36030 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_36098 R-NAT-1130153 A4A49_36098 [cytosol] R-NAT-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119332 Jasmonic acid biosynthesis none Nicotiana attenuata A4A49_36098 R-NAT-6787115 A4A49_36098 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_36103 R-NAT-8854127-2 A4A49_36103 [cytosol] R-NAT-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119556 Choline biosynthesis I none Nicotiana attenuata A4A49_36128 R-NAT-1128528 A4A49_36128 [plasma membrane] R-NAT-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119314 Cellulose biosynthesis none Nicotiana attenuata A4A49_36137 R-NAT-1125564 A4A49_36137 [cytosol] R-NAT-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119291 Nitrate assimilation none Nicotiana attenuata A4A49_36137 R-NAT-1125564 A4A49_36137 [cytosol] R-NAT-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119293 Glutamine biosynthesis I none Nicotiana attenuata A4A49_36137 R-NAT-1125564 A4A49_36137 [cytosol] R-NAT-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119443 Ammonia assimilation cycle none Nicotiana attenuata A4A49_36166 R-NAT-1130162 A4A49_36166 [chloroplast] R-NAT-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119494 Tryptophan biosynthesis none Nicotiana attenuata A4A49_36187 R-NAT-1123042 A4A49_36187 R-NAT-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119400 Methionine biosynthesis II none Nicotiana attenuata A4A49_36228 R-NAT-9826696 A4A49_36228 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_36266 R-NAT-1122785-3 A4A49_36266 [cytosol] R-NAT-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119273 Lysine biosynthesis I none Nicotiana attenuata A4A49_36266 R-NAT-1126726-3 A4A49_36266 [cytosol] R-NAT-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119273 Lysine biosynthesis I none Nicotiana attenuata A4A49_36266 R-NAT-1122785-3 A4A49_36266 [cytosol] R-NAT-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119283 Lysine biosynthesis II none Nicotiana attenuata A4A49_36266 R-NAT-1126726-3 A4A49_36266 [cytosol] R-NAT-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119283 Lysine biosynthesis II none Nicotiana attenuata A4A49_36266 R-NAT-1122785-3 A4A49_36266 [cytosol] R-NAT-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119570 Cytosolic glycolysis none Nicotiana attenuata A4A49_36305 R-NAT-8854121-2 A4A49_36305 [cytosol] R-NAT-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119556 Choline biosynthesis I none Nicotiana attenuata A4A49_36358 R-NAT-1124249-2 A4A49_36358 [cytosol] R-NAT-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119428 GDP-D-rhamnose biosynthesis none Nicotiana attenuata A4A49_36358 R-NAT-1124249-2 A4A49_36358 [cytosol] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_36364 R-NAT-8986767 A4A49_36364 [plastid] R-NAT-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8986768 Anther and pollen development none Nicotiana attenuata A4A49_36414 R-NAT-9675878 A4A49_36414 [nucleoplasm] R-NAT-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675782 Maturation none Nicotiana attenuata A4A49_36593 R-NAT-1123797 A4A49_36593 [cytosol] R-NAT-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119281 Aspartate biosynthesis I none Nicotiana attenuata A4A49_36593 R-NAT-5632003 A4A49_36593 [plastid stroma] R-NAT-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119553 Asparagine biosynthesis none Nicotiana attenuata A4A49_36598 R-NAT-1123087 A4A49_36598 [plasma membrane] R-NAT-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119314 Cellulose biosynthesis none Nicotiana attenuata A4A49_36615 R-NAT-1126269 A4A49_36615 [mitochondrial matrix] R-NAT-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119479 Valine degradation none Nicotiana attenuata A4A49_36618 R-NAT-1126269-2 A4A49_36618 [mitochondrial matrix] R-NAT-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119479 Valine degradation none Nicotiana attenuata A4A49_36667 R-NAT-1127738 A4A49_36667 [cytosol] R-NAT-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119273 Lysine biosynthesis I none Nicotiana attenuata A4A49_36667 R-NAT-1127738 A4A49_36667 [cytosol] R-NAT-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119283 Lysine biosynthesis II none Nicotiana attenuata A4A49_36667 R-NAT-5606514 A4A49_36667 [plastid stroma] R-NAT-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119419 Lysine biosynthesis VI none Nicotiana attenuata A4A49_36668 R-NAT-1125417-2 A4A49_36668 [cytosol] R-NAT-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119265 Tetrahydrofolate biosynthesis I none Nicotiana attenuata A4A49_36668 R-NAT-1125417-2 A4A49_36668 [cytosol] R-NAT-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119523 Tetrahydrofolate biosynthesis II none Nicotiana attenuata A4A49_36700 R-NAT-1127151 A4A49_36700 [cytosol] R-NAT-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119384 NAD biosynthesis I (from aspartate) none Nicotiana attenuata A4A49_36757 R-NAT-1128989 A4A49_36757 [plastid stroma] R-NAT-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119509 Histidine biosynthesis I none Nicotiana attenuata A4A49_36759 R-NAT-9618197-2 A4A49_36759 [plasma membrane] R-NAT-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9618218 Arsenic uptake and detoxification none Nicotiana attenuata A4A49_36775 R-NAT-5149657-2 A4A49_36775 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_36775 R-NAT-1129239-2 A4A49_36775 [cytosol] R-NAT-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119570 Cytosolic glycolysis none Nicotiana attenuata A4A49_36777 R-NAT-1126560 A4A49_36777 [cytosol] R-NAT-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119516 Trehalose biosynthesis I none Nicotiana attenuata A4A49_36847 R-NAT-1129547-6 A4A49_36847 [cytosol] R-NAT-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119389 Phenylalanine biosynthesis I none Nicotiana attenuata A4A49_36847 R-NAT-1129547-6 A4A49_36847 [cytosol] R-NAT-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119400 Methionine biosynthesis II none Nicotiana attenuata A4A49_36847 R-NAT-1129547-6 A4A49_36847 [cytosol] R-NAT-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119506 tyrosine degradation I none Nicotiana attenuata A4A49_36848 R-NAT-6787093-2 A4A49_36848 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_36887 R-NAT-3240748-2 A4A49_36887 [cytosol] R-NAT-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Nicotiana attenuata A4A49_36915 R-NAT-1128322 A4A49_36915 [cytosol] R-NAT-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119384 NAD biosynthesis I (from aspartate) none Nicotiana attenuata A4A49_36932 R-NAT-8879002 A4A49_36932 [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_37004 R-NAT-4752547-2 A4A49_37004 [plastid stroma] R-NAT-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119498 Phylloquinone biosynthesis none Nicotiana attenuata A4A49_37031 R-NAT-9681885 A4A49_37031 [Golgi membrane] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_37063 R-NAT-1125974 A4A49_37063 [cytosol] R-NAT-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119262 Threonine biosynthesis from homoserine none Nicotiana attenuata A4A49_37063 R-NAT-1125974 A4A49_37063 [cytosol] R-NAT-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119400 Methionine biosynthesis II none Nicotiana attenuata A4A49_37090 R-NAT-8933728 A4A49_37090 [nucleoplasm] R-NAT-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8933811 Circadian rhythm none Nicotiana attenuata A4A49_37162 R-NAT-1125612 A4A49_37162 [cytosol] R-NAT-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119353 Linear furanocoumarin biosynthesis none Nicotiana attenuata A4A49_37171 R-NAT-9675845 A4A49_37171 [nucleoplasm] R-NAT-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675782 Maturation none Nicotiana attenuata A4A49_37173 R-NAT-8868990-2 A4A49_37173 [endoplasmic reticulum membrane] R-NAT-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8868949 Intracellular auxin transport none Nicotiana attenuata A4A49_37174 R-NAT-1126320 A4A49_37174 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_37202 R-NAT-8933816 A4A49_37202 [nucleoplasm] R-NAT-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8933811 Circadian rhythm none Nicotiana attenuata A4A49_37211 R-NAT-1123077-3 A4A49_37211 [cytosol] R-NAT-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119458 Glutamate degradation none Nicotiana attenuata A4A49_37219 R-NAT-1128613 A4A49_37219 [cytosol] R-NAT-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119316 Phenylpropanoid biosynthesis none Nicotiana attenuata A4A49_37232 R-NAT-9646016-2 A4A49_37232 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_37232 R-NAT-9646016-2 A4A49_37232 [nucleoplasm] R-NAT-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675782 Maturation none Nicotiana attenuata A4A49_37232 R-NAT-9646016-2 A4A49_37232 [nucleoplasm] R-NAT-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675885 Lagging strand synthesis none Nicotiana attenuata A4A49_37271 R-NAT-8879004 A4A49_37271 [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_37273 R-NAT-3240748 A4A49_37273 [cytosol] R-NAT-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Nicotiana attenuata A4A49_37280 R-NAT-1124496 A4A49_37280 [cytosol] R-NAT-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119615 Mevalonate pathway none Nicotiana attenuata A4A49_37357 R-NAT-6787093-6 A4A49_37357 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_37381 R-NAT-3321270 A4A49_37381 [chloroplast inner membrane] R-NAT-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119287 Vitamin E biosynthesis none Nicotiana attenuata A4A49_37460 R-NAT-8854121-4 A4A49_37460 [cytosol] R-NAT-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119556 Choline biosynthesis I none Nicotiana attenuata A4A49_37462 R-NAT-1122892-4 A4A49_37462 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_37462 R-NAT-1122892-4 A4A49_37462 [nucleoplasm] R-NAT-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030557 Lateral root initiation none Nicotiana attenuata A4A49_37462 R-NAT-1122892-4 A4A49_37462 [nucleoplasm] R-NAT-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030654 Primary root development none Nicotiana attenuata A4A49_37471 R-NAT-9826696-3 A4A49_37471 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_37504 R-NAT-4788601-3 A4A49_37504 [plastid stroma] R-NAT-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119509 Histidine biosynthesis I none Nicotiana attenuata A4A49_37541 R-NAT-9025351 A4A49_37541 [cytosol] R-NAT-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119402 Phospholipid biosynthesis I none Nicotiana attenuata A4A49_37553 R-NAT-4415078-2 A4A49_37553 [cytosol] R-NAT-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-3899351 Abscisic acid (ABA) mediated signaling none Nicotiana attenuata A4A49_37569 R-NAT-4752546 A4A49_37569 [plastid stroma] R-NAT-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119498 Phylloquinone biosynthesis none Nicotiana attenuata A4A49_37572 R-NAT-9916309-2 CPK3 [plasma membrane] R-NAT-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9916190 Root angle formation: elongation and curvature response none Nicotiana attenuata A4A49_37680 R-NAT-1126436 A4A49_37680 [cytosol] R-NAT-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119615 Mevalonate pathway none Nicotiana attenuata A4A49_37691 R-NAT-5654797 A4A49_37691 [nucleoplasm] R-NAT-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654828 Strigolactone signaling none Nicotiana attenuata A4A49_37696 R-NAT-1130327-3 A4A49_37696 [cytosol] R-NAT-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119586 Cyanate degradation none Nicotiana attenuata A4A49_37784 R-NAT-1129769 A4A49_37784 [cytosol] R-NAT-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119332 Jasmonic acid biosynthesis none Nicotiana attenuata A4A49_37784 R-NAT-1129769 A4A49_37784 [cytosol] R-NAT-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119618 13-LOX and 13-HPL pathway none Nicotiana attenuata A4A49_37819 R-NAT-5655007-2 A4A49_37819 [Golgi lumen] R-NAT-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5655010 Xylogalacturonan biosynthesis none Nicotiana attenuata A4A49_37882 R-NAT-1126531-3 A4A49_37882 [cytosol] R-NAT-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119410 Ascorbate biosynthesis none Nicotiana attenuata A4A49_37882 R-NAT-1126531-3 A4A49_37882 [cytosol] R-NAT-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119628 GDP-mannose metabolism none Nicotiana attenuata A4A49_37917 R-NAT-1129136 A4A49_37917 [plastid stroma] R-NAT-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Nicotiana attenuata A4A49_37935 R-NAT-1129478 A4A49_37935 [cytosol] R-NAT-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119273 Lysine biosynthesis I none Nicotiana attenuata A4A49_37935 R-NAT-1129478 A4A49_37935 [cytosol] R-NAT-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119283 Lysine biosynthesis II none Nicotiana attenuata A4A49_37935 R-NAT-5606483 A4A49_37935 [plastid stroma] R-NAT-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119419 Lysine biosynthesis VI none Nicotiana attenuata A4A49_38093 R-NAT-9826639-3 A4A49_38093 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_38110 R-NAT-8934168 A4A49_38110 [nucleoplasm] R-NAT-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8934036 Long day regulated expression of florigens none Nicotiana attenuata A4A49_38110 R-NAT-8934168 A4A49_38110 [nucleoplasm] R-NAT-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8934108 Short day regulated expression of florigens none Nicotiana attenuata A4A49_38110 R-NAT-9920270 A4A49_38110 [nucleoplasm] R-NAT-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8934108 Short day regulated expression of florigens none Nicotiana attenuata A4A49_38110 R-NAT-8934168 A4A49_38110 [nucleoplasm] R-NAT-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9928946 Drought escape (DE) via ABA-independent pathway none Nicotiana attenuata A4A49_38160 R-NAT-1125564-2 A4A49_38160 [cytosol] R-NAT-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119291 Nitrate assimilation none Nicotiana attenuata A4A49_38160 R-NAT-1125564-2 A4A49_38160 [cytosol] R-NAT-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119293 Glutamine biosynthesis I none Nicotiana attenuata A4A49_38160 R-NAT-1125564-2 A4A49_38160 [cytosol] R-NAT-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119443 Ammonia assimilation cycle none Nicotiana attenuata A4A49_38201 R-NAT-8986695 A4A49_38201 [endoplasmic reticulum membrane] R-NAT-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8986768 Anther and pollen development none Nicotiana attenuata A4A49_38296 R-NAT-4788601 A4A49_38296 [plastid stroma] R-NAT-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119509 Histidine biosynthesis I none Nicotiana attenuata A4A49_38305 R-NAT-8868994-2 A4A49_38305 [endoplasmic reticulum membrane] R-NAT-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8868949 Intracellular auxin transport none Nicotiana attenuata A4A49_38368 R-NAT-1123819-3 A4A49_38368 [plastid stroma] R-NAT-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119464 Methylerythritol phosphate pathway none Nicotiana attenuata A4A49_38406 R-NAT-9638999-4 A4A49_38406 [cytosol] R-NAT-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119434 Phytic acid biosynthesis (lipid-independent) none Nicotiana attenuata A4A49_38408 R-NAT-1127173-3 A4A49_38408 [cytosol] R-NAT-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119540 Leucine biosynthesis none Nicotiana attenuata A4A49_38454 R-NAT-5632110 A4A49_38454 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_38454 R-NAT-5632110 A4A49_38454 [nucleoplasm] R-NAT-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5679411 Gibberellin signaling none Nicotiana attenuata A4A49_38457 R-NAT-1124190 A4A49_38457 [plastid stroma] R-NAT-1119412 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119412 Chlorophyll a biosynthesis I none Nicotiana attenuata A4A49_38487 R-NAT-1130281-2 A4A49_38487 [cytosol] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_38496 R-NAT-9639874-2 A4A49_38496 [plasma membrane] R-NAT-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639861 Development of root hair none Nicotiana attenuata A4A49_38584 R-NAT-1122974-4 A4A49_38584 [mitochondrial matrix] R-NAT-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119479 Valine degradation none Nicotiana attenuata A4A49_38585 R-NAT-1124598-3 A4A49_38585 [cytosol] R-NAT-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119300 Glycolipid desaturation none Nicotiana attenuata A4A49_38602 R-NAT-1123092 A4A49_38602 [cytosol] R-NAT-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119278 PRPP biosynthesis I none Nicotiana attenuata A4A49_38610 R-NAT-1123470 A4A49_38610 [cytosol] R-NAT-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119292 Cytokinins 7-N-glucoside biosynthesis none Nicotiana attenuata A4A49_38610 R-NAT-1123470 A4A49_38610 [cytosol] R-NAT-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119375 Cytokinins 9-N-glucoside biosynthesis none Nicotiana attenuata A4A49_38610 R-NAT-1123470 A4A49_38610 [cytosol] R-NAT-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119473 Cytokinins-O-glucoside biosynthesis none Nicotiana attenuata A4A49_38619 R-NAT-9826674 A4A49_38619 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_38648 R-NAT-9611889-2 A4A49_38648 [mitochondrial matrix] R-NAT-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119479 Valine degradation none Nicotiana attenuata A4A49_38655 R-NAT-1124613 A4A49_38655 [plasma membrane] R-NAT-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119314 Cellulose biosynthesis none Nicotiana attenuata A4A49_38664 R-NAT-8986695-2 A4A49_38664 [endoplasmic reticulum membrane] R-NAT-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8986768 Anther and pollen development none Nicotiana attenuata A4A49_38718 R-NAT-9639892-4 A4A49_38718 [cell wall] R-NAT-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639861 Development of root hair none Nicotiana attenuata A4A49_38722 R-NAT-8987467 A4A49_38722 [chloroplast] R-NAT-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119502 Allantoin degradation none Nicotiana attenuata A4A49_38757 R-NAT-9924543 CYP714D1/EUI1 [endoplasmic reticulum membrane] R-NAT-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Nicotiana attenuata A4A49_38818 R-NAT-5608218 A4A49_38818 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_38818 R-NAT-5608218 A4A49_38818 [nucleoplasm] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_38818 R-NAT-9658968 A4A49_38818 [cytosol] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_38827 R-NAT-9025699-2 A4A49_38827 [plasma membrane] R-NAT-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8858053 Polar auxin transport none Nicotiana attenuata A4A49_38827 R-NAT-9025699-2 A4A49_38827 [plasma membrane] R-NAT-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9025727 Iron uptake and transport in root vascular system none Nicotiana attenuata A4A49_38864 R-NAT-1124269 A4A49_38864 [cytosol] R-NAT-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119456 Brassinosteroid biosynthesis II none Nicotiana attenuata A4A49_38884 R-NAT-1128857-2 A4A49_38884 [cytosol] R-NAT-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119609 Phaseic acid biosynthesis none Nicotiana attenuata A4A49_38945 R-NAT-9918175-3 A4A49_38945 [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_38959 R-NAT-5632238-2 A4A49_38959 [cytosol] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_38959 R-NAT-5632238-2 A4A49_38959 [cytosol] R-NAT-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8934257 Transition from vegetative to reproductive shoot apical meristem none Nicotiana attenuata A4A49_38959 R-NAT-9927894-2 A4A49_38959 [nucleoplasm] R-NAT-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8934257 Transition from vegetative to reproductive shoot apical meristem none Nicotiana attenuata A4A49_38959 R-NAT-5632238-2 A4A49_38959 [cytosol] R-NAT-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9609102 Flower development none Nicotiana attenuata A4A49_38959 R-NAT-5632238-2 A4A49_38959 [cytosol] R-NAT-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9928831 Severe drought none Nicotiana attenuata A4A49_38959 R-NAT-9927894-2 A4A49_38959 [nucleoplasm] R-NAT-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9928831 Severe drought none Nicotiana attenuata A4A49_38969 R-NAT-8868866 A4A49_38969 [endoplasmic reticulum membrane] R-NAT-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8868949 Intracellular auxin transport none Nicotiana attenuata A4A49_38992 R-NAT-1125997 A4A49_38992 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_38992 R-NAT-1125997 A4A49_38992 [nucleoplasm] R-NAT-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030680 Crown root development none Nicotiana attenuata A4A49_38996 R-NAT-1128594 A4A49_38996 [cytosol] R-NAT-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119349 S-methylmethionine cycle none Nicotiana attenuata A4A49_38996 R-NAT-1128594 A4A49_38996 [cytosol] R-NAT-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119400 Methionine biosynthesis II none Nicotiana attenuata A4A49_39006 R-NAT-9658664 A4A49_39006 [plasma membrane] R-NAT-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119567 Beta-alanine biosynthesis I none Nicotiana attenuata A4A49_39115 R-NAT-5654911-3 A4A49_39115 [Golgi lumen] R-NAT-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654909 Xylan biosynthesis none Nicotiana attenuata A4A49_39152 R-NAT-1125151-4 A4A49_39152 [cytosol] R-NAT-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119400 Methionine biosynthesis II none Nicotiana attenuata A4A49_39152 R-NAT-1125151-4 A4A49_39152 [cytosol] R-NAT-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119501 S-adenosyl-L-methionine cycle none Nicotiana attenuata A4A49_39161 R-NAT-9638999-2 A4A49_39161 [cytosol] R-NAT-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119434 Phytic acid biosynthesis (lipid-independent) none Nicotiana attenuata A4A49_39168 R-NAT-1122403 A4A49_39168 [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_39236 R-NAT-1123819 A4A49_39236 [plastid stroma] R-NAT-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119464 Methylerythritol phosphate pathway none Nicotiana attenuata A4A49_39244 R-NAT-9639211 A4A49_39244 [plant-type vacuole membrane] R-NAT-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639136 Response to Aluminum stress none Nicotiana attenuata A4A49_39262 R-NAT-1130281 A4A49_39262 [cytosol] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_39290 R-NAT-1126440 A4A49_39290 [plastid stroma] R-NAT-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119430 Chorismate biosynthesis none Nicotiana attenuata A4A49_39312 R-NAT-1130181-3 A4A49_39312 [plastid stroma] R-NAT-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119430 Chorismate biosynthesis none Nicotiana attenuata A4A49_39334 R-NAT-5655075-2 A4A49_39334 [Golgi lumen] R-NAT-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5655101 Xyloglucan biosynthesis none Nicotiana attenuata A4A49_39470 R-NAT-8933728-3 A4A49_39470 [nucleoplasm] R-NAT-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8933811 Circadian rhythm none Nicotiana attenuata A4A49_39515 R-NAT-9681910-5 A4A49_39515 [Golgi membrane] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_39546 R-NAT-1123895-3 A4A49_39546 [cytosol] R-NAT-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119334 Ethylene biosynthesis from methionine none Nicotiana attenuata A4A49_39546 R-NAT-1123895-3 A4A49_39546 [cytosol] R-NAT-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119624 Methionine salvage pathway none Nicotiana attenuata A4A49_39640 R-NAT-1128054 A4A49_39640 [mitochondrial matrix] R-NAT-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119479 Valine degradation none Nicotiana attenuata A4A49_39675 R-NAT-9930197 MPK8 [nucleoplasm] R-NAT-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9766881 TF network involved in salinity response none Nicotiana attenuata A4A49_39751 R-NAT-1129203 A4A49_39751 [cytosol] R-NAT-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119428 GDP-D-rhamnose biosynthesis none Nicotiana attenuata A4A49_39751 R-NAT-1129203 A4A49_39751 [cytosol] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_39789 R-NAT-9638999 A4A49_39789 [cytosol] R-NAT-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119434 Phytic acid biosynthesis (lipid-independent) none Nicotiana attenuata A4A49_39809 R-NAT-1123148 A4A49_39809 [cytosol] R-NAT-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119300 Glycolipid desaturation none Nicotiana attenuata A4A49_39817 R-NAT-8987473 A4A49_39817 [peroxisomal matrix] R-NAT-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119312 Photorespiration none Nicotiana attenuata A4A49_39817 R-NAT-1124984 A4A49_39817 [cytosol] R-NAT-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119596 Glutamate biosynthesis I none Nicotiana attenuata A4A49_39969 R-NAT-9681910-4 A4A49_39969 [Golgi membrane] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_39974 R-NAT-8858112 A4A49_39974 [plasma membrane] R-NAT-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8858053 Polar auxin transport none Nicotiana attenuata A4A49_40046 R-NAT-8934069 A4A49_40046 [nucleoplasm] R-NAT-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8934036 Long day regulated expression of florigens none Nicotiana attenuata A4A49_40046 R-NAT-8934069 A4A49_40046 [nucleoplasm] R-NAT-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8934108 Short day regulated expression of florigens none Nicotiana attenuata A4A49_40138 R-NAT-5655070 A4A49_40138 [Golgi lumen] R-NAT-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5655101 Xyloglucan biosynthesis none Nicotiana attenuata A4A49_40149 R-NAT-9675365-2 A4A49_40149 [nucleoplasm] R-NAT-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675508 Root elongation none Nicotiana attenuata A4A49_40156 R-NAT-5138500 A4A49_40156 [plastid stroma] R-NAT-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119263 Arginine biosynthesis none Nicotiana attenuata A4A49_40156 R-NAT-1129397 A4A49_40156 [cytosol] R-NAT-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119273 Lysine biosynthesis I none Nicotiana attenuata A4A49_40156 R-NAT-1129397 A4A49_40156 [cytosol] R-NAT-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119283 Lysine biosynthesis II none Nicotiana attenuata A4A49_40156 R-NAT-1129397 A4A49_40156 [cytosol] R-NAT-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119295 Homoserine biosynthesis none Nicotiana attenuata A4A49_40156 R-NAT-5138500 A4A49_40156 [plastid stroma] R-NAT-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119539 Ornithine biosynthesis none Nicotiana attenuata A4A49_40156 R-NAT-5138500 A4A49_40156 [plastid stroma] R-NAT-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119622 Arginine biosynthesis II (acetyl cycle) none Nicotiana attenuata A4A49_40175 R-NAT-9675280 A4A49_40175 [nucleoplasm] R-NAT-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030680 Crown root development none Nicotiana attenuata A4A49_40206 R-NAT-1124788 A4A49_40206 [cytosol] R-NAT-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119601 Trehalose degradation II none Nicotiana attenuata A4A49_40253 R-NAT-9675878-2 A4A49_40253 [nucleoplasm] R-NAT-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675782 Maturation none Nicotiana attenuata A4A49_40254 R-NAT-5149683 A4A49_40254 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_40277 R-NAT-6788127 A4A49_40277 [nucleoplasm] R-NAT-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6788019 Salicylic acid signaling none Nicotiana attenuata A4A49_40277 R-NAT-6788179 A4A49_40277 [cytosol] R-NAT-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6788019 Salicylic acid signaling none Nicotiana attenuata A4A49_40313 R-NAT-5633270 A4A49_40313 [cytosol] R-NAT-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119495 Citrulline biosynthesis none Nicotiana attenuata A4A49_40351 R-NAT-6787093 A4A49_40351 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_40355 R-NAT-1130416-2 A4A49_40355 [mitochondrial matrix] R-NAT-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119337 Proline degradation none Nicotiana attenuata A4A49_40355 R-NAT-1130416-2 A4A49_40355 [mitochondrial matrix] R-NAT-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119495 Citrulline biosynthesis none Nicotiana attenuata A4A49_40362 R-NAT-9682506 A4A49_40362 [cytosol] R-NAT-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119410 Ascorbate biosynthesis none Nicotiana attenuata A4A49_40386 R-NAT-1129111 A4A49_40386 [cytosol] R-NAT-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119349 S-methylmethionine cycle none Nicotiana attenuata A4A49_40386 R-NAT-1129111 A4A49_40386 [cytosol] R-NAT-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119400 Methionine biosynthesis II none Nicotiana attenuata A4A49_40439 R-NAT-9025447 A4A49_40439 [cytosol] R-NAT-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119325 Sphingolipid metabolism none Nicotiana attenuata A4A49_40463 R-NAT-1125494-2 A4A49_40463 [endoplasmic reticulum membrane] R-NAT-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119402 Phospholipid biosynthesis I none Nicotiana attenuata A4A49_40482 R-NAT-1125406-3 A4A49_40482 [cytosol] R-NAT-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119418 Suberin biosynthesis none Nicotiana attenuata A4A49_40506 R-NAT-1125906 A4A49_40506 [cytosol] R-NAT-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119276 Choline biosynthesis III none Nicotiana attenuata A4A49_40516 R-NAT-1129924 A4A49_40516 [cytosol] R-NAT-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119342 Gamma-glutamyl cycle none Nicotiana attenuata A4A49_40516 R-NAT-1129924 A4A49_40516 [cytosol] R-NAT-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119483 Glutathione biosynthesis none Nicotiana attenuata A4A49_40542 R-NAT-5655007-5 A4A49_40542 [Golgi lumen] R-NAT-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5655010 Xylogalacturonan biosynthesis none Nicotiana attenuata A4A49_40590 R-NAT-9924413 WOX6 [nucleoplasm] R-NAT-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924451 Shoot (tiller) formation and regulation of tiller angle none Nicotiana attenuata A4A49_40604 R-NAT-9826674-2 A4A49_40604 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_40623 R-NAT-1122974-2 A4A49_40623 [mitochondrial matrix] R-NAT-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119479 Valine degradation none Nicotiana attenuata A4A49_40654 R-NAT-1126542 A4A49_40654 [cytosol] R-NAT-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119523 Tetrahydrofolate biosynthesis II none Nicotiana attenuata A4A49_40654 R-NAT-1126542 A4A49_40654 [cytosol] R-NAT-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119617 Folate polyglutamylation I none Nicotiana attenuata A4A49_40673 R-NAT-9675851 A4A49_40673 [nucleoplasm] R-NAT-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675815 Leading strand synthesis none Nicotiana attenuata A4A49_40676 R-NAT-1126996-4 A4A49_40676 [cytosol] R-NAT-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119316 Phenylpropanoid biosynthesis none Nicotiana attenuata A4A49_40700 R-NAT-9639957-3 A4A49_40700 [plasma membrane] R-NAT-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639861 Development of root hair none Nicotiana attenuata A4A49_40738 R-NAT-9640675 A4A49_40738 [nucleoplasm] R-NAT-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640882 Assembly of pre-replication complex none Nicotiana attenuata A4A49_40738 R-NAT-9640675 A4A49_40738 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_40777 R-NAT-9640789 A4A49_40777 [nucleoplasm] R-NAT-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640760 G1 phase none Nicotiana attenuata A4A49_40793 R-NAT-2685730-2 A4A49_40793 [cytosol] R-NAT-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119580 IAA biosynthesis II none Nicotiana attenuata A4A49_40893 R-NAT-8853988 Phosphatidylglycerophosphatase [mitochondrial matrix] R-NAT-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119260 Cardiolipin biosynthesis none Nicotiana attenuata A4A49_40897 R-NAT-2685721 A4A49_40897 [cytosol] R-NAT-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119580 IAA biosynthesis II none Nicotiana attenuata A4A49_41030 R-NAT-8986682-2 A4A49_41030 [extracellular region] R-NAT-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8986768 Anther and pollen development none Nicotiana attenuata A4A49_41086 R-NAT-1124813 A4A49_41086 [mitochondrial matrix] R-NAT-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119337 Proline degradation none Nicotiana attenuata A4A49_41086 R-NAT-8986570 A4A49_41086 [mitochondrial matrix] R-NAT-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119365 Lysine degradation II none Nicotiana attenuata A4A49_41086 R-NAT-9658682 A4A49_41086 [cytosol] R-NAT-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119567 Beta-alanine biosynthesis I none Nicotiana attenuata A4A49_41306 R-NAT-1129650 A4A49_41306 [cytosol] R-NAT-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119418 Suberin biosynthesis none Nicotiana attenuata A4A49_41381 R-NAT-1130084-2 A4A49_41381 [cytosol] R-NAT-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119486 IAA biosynthesis I none Nicotiana attenuata A4A49_41402 R-NAT-1126165 A4A49_41402 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_41402 R-NAT-5608120-3 A4A49_41402 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_41446 R-NAT-6788007 A4A49_41446 [cytosol] R-NAT-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6788019 Salicylic acid signaling none Nicotiana attenuata A4A49_41516 R-NAT-6787262-3 A4A49_41516 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_41656 R-NAT-9675365-3 A4A49_41656 [nucleoplasm] R-NAT-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675508 Root elongation none Nicotiana attenuata A4A49_41703 R-NAT-8986682 A4A49_41703 [extracellular region] R-NAT-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8986768 Anther and pollen development none Nicotiana attenuata A4A49_41757 R-NAT-9916305 A4A49_41757 [nucleoplasm] R-NAT-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9916190 Root angle formation: elongation and curvature response none Nicotiana attenuata A4A49_41800 R-NAT-9645907 A4A49_41800 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_41800 R-NAT-9645907 A4A49_41800 [nucleoplasm] R-NAT-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675824 DNA replication Initiation none Nicotiana attenuata A4A49_41842 R-NAT-1129818-2 A4A49_41842 [mitochondrial matrix] R-NAT-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119365 Lysine degradation II none Nicotiana attenuata A4A49_41842 R-NAT-1173242-2 A4A49_41842 [mitochondrial matrix] R-NAT-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119533 TCA cycle (plant) none Nicotiana attenuata A4A49_41898 R-NAT-1124765 A4A49_41898 [cytosol] R-NAT-1119499 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119499 Capsidiol biosynthesis none Nicotiana attenuata A4A49_42011 R-NAT-9618197-3 A4A49_42011 [plasma membrane] R-NAT-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9618218 Arsenic uptake and detoxification none Nicotiana attenuata A4A49_42052 R-NAT-1127491 A4A49_42052 [chloroplast] R-NAT-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119312 Photorespiration none Nicotiana attenuata A4A49_42163 R-NAT-1126604 A4A49_42163 [cytosol] R-NAT-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119438 Secologanin and strictosidine biosynthesis none Nicotiana attenuata A4A49_42169 R-NAT-1123894 A4A49_42169 [plasma membrane] R-NAT-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119314 Cellulose biosynthesis none Nicotiana attenuata A4A49_42195 R-NAT-9035785 A4A49_42195 [nucleoplasm] R-NAT-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9035605 Regulation of seed size none Nicotiana attenuata A4A49_42195 R-NAT-9035785 A4A49_42195 [nucleoplasm] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_42264 R-NAT-1126860 A4A49_42264 [cytosol] R-NAT-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119321 Glycerol degradation I none Nicotiana attenuata A4A49_42392 R-NAT-1126165-2 A4A49_42392 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_42392 R-NAT-5608120-2 A4A49_42392 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_42464 R-NAT-1129547-2 A4A49_42464 [cytosol] R-NAT-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119389 Phenylalanine biosynthesis I none Nicotiana attenuata A4A49_42464 R-NAT-1129547-2 A4A49_42464 [cytosol] R-NAT-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119400 Methionine biosynthesis II none Nicotiana attenuata A4A49_42464 R-NAT-1129547-2 A4A49_42464 [cytosol] R-NAT-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119506 tyrosine degradation I none Nicotiana attenuata A4A49_42608 R-NAT-8987571-2 A4A49_42608 [peroxisomal matrix] R-NAT-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119312 Photorespiration none Nicotiana attenuata A4A49_42689 R-NAT-1122827-7 A4A49_42689 [cytosol] R-NAT-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119334 Ethylene biosynthesis from methionine none Nicotiana attenuata A4A49_43119 R-NAT-1126593-2 A4A49_43119 [endosome] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_43119 R-NAT-5679293-2 A4A49_43119 [plasma membrane] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_43119 R-NAT-8858098-2 A4A49_43119 [plasma membrane] R-NAT-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8858053 Polar auxin transport none Nicotiana attenuata A4A49_43192 R-NAT-1130084-3 A4A49_43192 [cytosol] R-NAT-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119486 IAA biosynthesis I none Nicotiana attenuata A4A49_43425 R-NAT-1127562-3 A4A49_43425 [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_43425 R-NAT-1130466-3 A4A49_43425 [cytosol] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_43427 R-NAT-8858112-3 A4A49_43427 [plasma membrane] R-NAT-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8858053 Polar auxin transport none Nicotiana attenuata A4A49_43439 R-NAT-9826680-2 A4A49_43439 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_43524 R-NAT-8933738-2 A4A49_43524 [nucleoplasm] R-NAT-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8933811 Circadian rhythm none Nicotiana attenuata A4A49_43587 R-NAT-1124348-2 A4A49_43587 [cytosol] R-NAT-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119465 Sucrose biosynthesis none Nicotiana attenuata A4A49_46498 R-NAT-1124778-2 A4A49_46498 [plastid stroma] R-NAT-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119464 Methylerythritol phosphate pathway none Nicotiana attenuata A4A49_50284 R-NAT-1126320-3 A4A49_50284 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_50410 R-NAT-9025487 A4A49_50410 [cytosol] R-NAT-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119325 Sphingolipid metabolism none Nicotiana attenuata A4A49_53738 R-NAT-6786994-2 A4A49_53738 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_53897 R-NAT-1124032 A4A49_53897 [cytosol] R-NAT-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119540 Leucine biosynthesis none Nicotiana attenuata A4A49_55561 R-NAT-8854127-3 A4A49_55561 [cytosol] R-NAT-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119556 Choline biosynthesis I none Nicotiana attenuata A4A49_55738 R-NAT-1127523 A4A49_55738 [cytosol] R-NAT-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Nicotiana attenuata A4A49_55768 R-NAT-1130152 A4A49_55768 [cytosol] R-NAT-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119394 Pantothenate and coenzyme A biosynthesis III none Nicotiana attenuata A4A49_55794 R-NAT-5149657-6 A4A49_55794 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_55794 R-NAT-1129239-6 A4A49_55794 [cytosol] R-NAT-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119570 Cytosolic glycolysis none Nicotiana attenuata A4A49_55936 R-NAT-9608693 A4A49_55936 [cytosol] R-NAT-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9608575 Reproductive meristem phase change none Nicotiana attenuata A4A49_56022 R-NAT-1129934-2 A4A49_56022 [plastid stroma] R-NAT-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119430 Chorismate biosynthesis none Nicotiana attenuata A4A49_56286 R-NAT-9675790 A4A49_56286 [nucleoplasm] R-NAT-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9675824 DNA replication Initiation none Nicotiana attenuata A4A49_56331 R-NAT-1125151 A4A49_56331 [cytosol] R-NAT-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119400 Methionine biosynthesis II none Nicotiana attenuata A4A49_56331 R-NAT-1125151 A4A49_56331 [cytosol] R-NAT-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119501 S-adenosyl-L-methionine cycle none Nicotiana attenuata A4A49_56336 R-NAT-1124598-6 A4A49_56336 [cytosol] R-NAT-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119300 Glycolipid desaturation none Nicotiana attenuata A4A49_56364 R-NAT-1125151-2 A4A49_56364 [cytosol] R-NAT-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119400 Methionine biosynthesis II none Nicotiana attenuata A4A49_56364 R-NAT-1125151-2 A4A49_56364 [cytosol] R-NAT-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119501 S-adenosyl-L-methionine cycle none Nicotiana attenuata A4A49_56390 R-NAT-8854121-3 A4A49_56390 [cytosol] R-NAT-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119556 Choline biosynthesis I none Nicotiana attenuata A4A49_56422 R-NAT-1124560-2 A4A49_56422 [cytosol] R-NAT-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119563 UDP-D-xylose biosynthesis none Nicotiana attenuata A4A49_56422 R-NAT-9681903-2 A4A49_56422 [Golgi lumen] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_56422 R-NAT-1124560-2 A4A49_56422 [cytosol] R-NAT-5654894 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654894 UDP-D-apiose biosynthesis none Nicotiana attenuata A4A49_56617 R-NAT-9611544 SPL11 [nucleoplasm] R-NAT-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9611432 Recognition of fungal and bacterial pathogens and immunity response none Nicotiana attenuata A4A49_56617 R-NAT-9611440 phospho-phosphorylated-SPL11 [nucleoplasm] R-NAT-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9611432 Recognition of fungal and bacterial pathogens and immunity response none Nicotiana attenuata A4A49_56788 R-NAT-9608694-4 A4A49_56788 [cytosol] R-NAT-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9928831 Severe drought none Nicotiana attenuata A4A49_56788 R-NAT-9928774-4 A4A49_56788 [nucleoplasm] R-NAT-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9928831 Severe drought none Nicotiana attenuata A4A49_56798 R-NAT-6788172 A4A49_56798 [nucleoplasm] R-NAT-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6788019 Salicylic acid signaling none Nicotiana attenuata A4A49_56944 R-NAT-1123757-7 A4A49_56944 [cytosol] R-NAT-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119473 Cytokinins-O-glucoside biosynthesis none Nicotiana attenuata A4A49_56969 R-NAT-9618056-5 A4A49_56969 [plasma membrane] R-NAT-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9618218 Arsenic uptake and detoxification none Nicotiana attenuata A4A49_57020 R-NAT-1127562 A4A49_57020 [amyloplast] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_57020 R-NAT-1130466 A4A49_57020 [cytosol] R-NAT-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119477 Starch biosynthesis none Nicotiana attenuata A4A49_57162 R-NAT-6786994-3 A4A49_57162 [nucleoplasm] R-NAT-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6787011 Jasmonic acid signaling none Nicotiana attenuata A4A49_57520 R-NAT-9681885-3 A4A49_57520 [Golgi membrane] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_57580 R-NAT-9924407-7 EXPB5 [basolateral plasma membrane] R-NAT-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924451 Shoot (tiller) formation and regulation of tiller angle none Nicotiana attenuata A4A49_57607 R-NAT-1127916-2 A4A49_57607 [plastid stroma] R-NAT-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119367 Polyisoprenoid biosynthesis none Nicotiana attenuata A4A49_57607 R-NAT-1127916-2 A4A49_57607 [plastid stroma] R-NAT-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119615 Mevalonate pathway none Nicotiana attenuata A4A49_57799 R-NAT-9924407-5 EXPB5 [basolateral plasma membrane] R-NAT-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924451 Shoot (tiller) formation and regulation of tiller angle none Nicotiana attenuata A4A49_57826 R-NAT-1126604-2 A4A49_57826 [cytosol] R-NAT-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119438 Secologanin and strictosidine biosynthesis none Nicotiana attenuata A4A49_58202 R-NAT-5683299 A4A49_58202 [cytosol] R-NAT-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119451 Xylose degradation none Nicotiana attenuata A4A49_58202 R-NAT-1130302 A4A49_58202 [cytosol] R-NAT-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119451 Xylose degradation none Nicotiana attenuata A4A49_58314 R-NAT-9682506-2 A4A49_58314 [cytosol] R-NAT-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119410 Ascorbate biosynthesis none Nicotiana attenuata A4A49_58458 R-NAT-5149646 A4A49_58458 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_58458 R-NAT-1126652 A4A49_58458 [cytosol] R-NAT-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119570 Cytosolic glycolysis none Nicotiana attenuata A4A49_58606 R-NAT-1123525-2 A4A49_58606 [cytosol] R-NAT-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119384 NAD biosynthesis I (from aspartate) none Nicotiana attenuata A4A49_58617 R-NAT-1126794 A4A49_58617 [cytosol] R-NAT-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119331 Cysteine biosynthesis I none Nicotiana attenuata A4A49_58702 R-NAT-1126830 A4A49_58702 [mitochondrial matrix] R-NAT-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119533 TCA cycle (plant) none Nicotiana attenuata A4A49_58784 R-NAT-8879009 A4A49_58784 [nucleoplasm] R-NAT-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8879007 Response to cold temperature none Nicotiana attenuata A4A49_58799 R-NAT-9640701-2 A4A49_58799 [nucleoplasm] R-NAT-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640882 Assembly of pre-replication complex none Nicotiana attenuata A4A49_58799 R-NAT-9640701-2 A4A49_58799 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_59078 R-NAT-1122785-2 A4A49_59078 [cytosol] R-NAT-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119273 Lysine biosynthesis I none Nicotiana attenuata A4A49_59078 R-NAT-1126726-2 A4A49_59078 [cytosol] R-NAT-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119273 Lysine biosynthesis I none Nicotiana attenuata A4A49_59078 R-NAT-1122785-2 A4A49_59078 [cytosol] R-NAT-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119283 Lysine biosynthesis II none Nicotiana attenuata A4A49_59078 R-NAT-1126726-2 A4A49_59078 [cytosol] R-NAT-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119283 Lysine biosynthesis II none Nicotiana attenuata A4A49_59078 R-NAT-1122785-2 A4A49_59078 [cytosol] R-NAT-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119570 Cytosolic glycolysis none Nicotiana attenuata A4A49_59224 R-NAT-5608213-2 A4A49_59224 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_59337 R-NAT-1129896-3 A4A49_59337 [mitochondrial matrix] R-NAT-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119533 TCA cycle (plant) none Nicotiana attenuata A4A49_59541 R-NAT-9681915-3 A4A49_59541 [Golgi membrane] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_59551 R-NAT-9618056-2 A4A49_59551 [plasma membrane] R-NAT-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9618218 Arsenic uptake and detoxification none Nicotiana attenuata A4A49_59632 R-NAT-5632139-2 A4A49_59632 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_59727 R-NAT-8933738 A4A49_59727 [nucleoplasm] R-NAT-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8933811 Circadian rhythm none Nicotiana attenuata A4A49_60090 R-NAT-1129926-2 A4A49_60090 [cytosol] R-NAT-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Nicotiana attenuata A4A49_60135 R-NAT-1124083 A4A49_60135 [cytosol] R-NAT-1119323 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119323 Lipid-A-precursor biosynthesis none Nicotiana attenuata A4A49_60175 R-NAT-5654827-2 A4A49_60175 [nucleoplasm] R-NAT-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654828 Strigolactone signaling none Nicotiana attenuata A4A49_60215 R-NAT-9608930-2 A4A49_60215 [nucleoplasm] R-NAT-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8934036 Long day regulated expression of florigens none Nicotiana attenuata A4A49_60228 R-NAT-1127192 A4A49_60228 [cytosol] R-NAT-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119291 Nitrate assimilation none Nicotiana attenuata A4A49_60228 R-NAT-1127192 A4A49_60228 [cytosol] R-NAT-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119293 Glutamine biosynthesis I none Nicotiana attenuata A4A49_60228 R-NAT-1127192 A4A49_60228 [cytosol] R-NAT-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119443 Ammonia assimilation cycle none Nicotiana attenuata A4A49_60373 R-NAT-9639892 A4A49_60373 [cell wall] R-NAT-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9639861 Development of root hair none Nicotiana attenuata A4A49_60379 R-NAT-1125489 A4A49_60379 [Golgi membrane] R-NAT-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119428 GDP-D-rhamnose biosynthesis none Nicotiana attenuata A4A49_60379 R-NAT-1127743 A4A49_60379 [cytosol] R-NAT-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119428 GDP-D-rhamnose biosynthesis none Nicotiana attenuata A4A49_60379 R-NAT-1125489 A4A49_60379 [Golgi membrane] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_60379 R-NAT-1125489 A4A49_60379 [Golgi membrane] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_60379 R-NAT-1127743 A4A49_60379 [cytosol] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_60405 R-NAT-1122785 A4A49_60405 [cytosol] R-NAT-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119273 Lysine biosynthesis I none Nicotiana attenuata A4A49_60405 R-NAT-1126726 A4A49_60405 [cytosol] R-NAT-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119273 Lysine biosynthesis I none Nicotiana attenuata A4A49_60405 R-NAT-1122785 A4A49_60405 [cytosol] R-NAT-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119283 Lysine biosynthesis II none Nicotiana attenuata A4A49_60405 R-NAT-1126726 A4A49_60405 [cytosol] R-NAT-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119283 Lysine biosynthesis II none Nicotiana attenuata A4A49_60405 R-NAT-1122785 A4A49_60405 [cytosol] R-NAT-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119570 Cytosolic glycolysis none Nicotiana attenuata A4A49_60562 R-NAT-9927865 A4A49_60562 [nucleoplasm] R-NAT-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-8934257 Transition from vegetative to reproductive shoot apical meristem none Nicotiana attenuata A4A49_61187 R-NAT-1123757-6 A4A49_61187 [cytosol] R-NAT-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119473 Cytokinins-O-glucoside biosynthesis none Nicotiana attenuata A4A49_61221 R-NAT-1123757-4 A4A49_61221 [cytosol] R-NAT-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119473 Cytokinins-O-glucoside biosynthesis none Nicotiana attenuata A4A49_61317 R-NAT-1127916 A4A49_61317 [plastid stroma] R-NAT-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119367 Polyisoprenoid biosynthesis none Nicotiana attenuata A4A49_61317 R-NAT-1127916 A4A49_61317 [plastid stroma] R-NAT-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119615 Mevalonate pathway none Nicotiana attenuata A4A49_61334 R-NAT-1125447-2 A4A49_61334 [plastid stroma] R-NAT-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119509 Histidine biosynthesis I none Nicotiana attenuata A4A49_61390 R-NAT-9026148 A4A49_61390 [mitochondrion] R-NAT-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119458 Glutamate degradation none Nicotiana attenuata A4A49_61390 R-NAT-1130288 A4A49_61390 [cytosol] R-NAT-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119610 Biotin biosynthesis II none Nicotiana attenuata A4A49_61447 R-NAT-1127539 A4A49_61447 [cytosol] R-NAT-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Nicotiana attenuata A4A49_61447 R-NAT-1127539 A4A49_61447 [cytosol] R-NAT-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119439 Cholesterol biosynthesis III (via desmosterol) none Nicotiana attenuata A4A49_61447 R-NAT-1127539 A4A49_61447 [cytosol] R-NAT-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119559 Cholesterol biosynthesis I none Nicotiana attenuata A4A49_61496 R-NAT-8987548 A4A49_61496 [peroxisomal matrix] R-NAT-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119312 Photorespiration none Nicotiana attenuata A4A49_61537 R-NAT-1125489-3 A4A49_61537 [Golgi membrane] R-NAT-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119428 GDP-D-rhamnose biosynthesis none Nicotiana attenuata A4A49_61537 R-NAT-1127743-3 A4A49_61537 [cytosol] R-NAT-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119428 GDP-D-rhamnose biosynthesis none Nicotiana attenuata A4A49_61537 R-NAT-1125489-3 A4A49_61537 [Golgi membrane] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_61537 R-NAT-1125489-3 A4A49_61537 [Golgi membrane] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_61537 R-NAT-1127743-3 A4A49_61537 [cytosol] R-NAT-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Nicotiana attenuata A4A49_61546 R-NAT-1122892-2 A4A49_61546 [nucleoplasm] R-NAT-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5608118 Auxin signalling none Nicotiana attenuata A4A49_61546 R-NAT-1122892-2 A4A49_61546 [nucleoplasm] R-NAT-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030557 Lateral root initiation none Nicotiana attenuata A4A49_61546 R-NAT-1122892-2 A4A49_61546 [nucleoplasm] R-NAT-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9030654 Primary root development none Nicotiana attenuata A4A49_62224 R-NAT-1130327-8 A4A49_62224 [cytosol] R-NAT-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119586 Cyanate degradation none Nicotiana attenuata A4A49_62426 R-NAT-9035614-3 A4A49_62426 [cytosol] R-NAT-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9035605 Regulation of seed size none Nicotiana attenuata A4A49_62426 R-NAT-9035651-3 A4A49_62426 [nucleoplasm] R-NAT-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9035605 Regulation of seed size none Nicotiana attenuata A4A49_62455 R-NAT-5632120-2 A4A49_62455 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_62669 R-NAT-1129514 A4A49_62669 [chloroplast] R-NAT-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119579 Glycine betaine biosynthesis III none Nicotiana attenuata A4A49_62702 R-NAT-1128071 A4A49_62702 [mitochondrial matrix] R-NAT-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119533 TCA cycle (plant) none Nicotiana attenuata A4A49_62766 R-NAT-1125920-2 A4A49_62766 [cytosol] R-NAT-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119273 Lysine biosynthesis I none Nicotiana attenuata A4A49_62766 R-NAT-1125920-2 A4A49_62766 [cytosol] R-NAT-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119283 Lysine biosynthesis II none Nicotiana attenuata A4A49_62920 R-NAT-9640789-2 A4A49_62920 [nucleoplasm] R-NAT-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640760 G1 phase none Nicotiana attenuata A4A49_62932 R-NAT-9640785 A4A49_62932 [nucleoplasm] R-NAT-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9640882 Assembly of pre-replication complex none Nicotiana attenuata A4A49_62932 R-NAT-9640785 A4A49_62932 [nucleoplasm] R-NAT-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9645850 Activation of pre-replication complex none Nicotiana attenuata A4A49_62935 R-NAT-9916305-2 A4A49_62935 [nucleoplasm] R-NAT-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9916190 Root angle formation: elongation and curvature response none Nicotiana attenuata A4A49_63060 R-NAT-5632139-3 A4A49_63060 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_63173 R-NAT-1129781-2 A4A49_63173 [chloroplast] R-NAT-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119494 Tryptophan biosynthesis none Nicotiana attenuata A4A49_63178 R-NAT-1124560 A4A49_63178 [cytosol] R-NAT-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119563 UDP-D-xylose biosynthesis none Nicotiana attenuata A4A49_63178 R-NAT-9681903 A4A49_63178 [Golgi lumen] R-NAT-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119574 UDP-L-arabinose biosynthesis and transport none Nicotiana attenuata A4A49_63178 R-NAT-1124560 A4A49_63178 [cytosol] R-NAT-5654894 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5654894 UDP-D-apiose biosynthesis none Nicotiana attenuata A4A49_63289 R-NAT-1125237-2 A4A49_63289 [mitochondrial matrix] R-NAT-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119533 TCA cycle (plant) none Nicotiana attenuata A4A49_63308 R-NAT-1126307 A4A49_63308 [cytosol] R-NAT-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119370 Sterol biosynthesis none Nicotiana attenuata A4A49_63383 R-NAT-1123757-3 A4A49_63383 [cytosol] R-NAT-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119473 Cytokinins-O-glucoside biosynthesis none Nicotiana attenuata A4A49_63523 R-NAT-1128328-3 A4A49_63523 [cytosol] R-NAT-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119615 Mevalonate pathway none Nicotiana attenuata A4A49_63654 R-NAT-1130327-2 A4A49_63654 [cytosol] R-NAT-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119586 Cyanate degradation none Nicotiana attenuata A4A49_63802 R-NAT-5632241-2 A4A49_63802 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_63861 R-NAT-4827041 A4A49_63861 [plastid stroma] R-NAT-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-4827054 Tetrapyrrole biosynthesis I none Nicotiana attenuata A4A49_63866 R-NAT-1130327 A4A49_63866 [cytosol] R-NAT-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119586 Cyanate degradation none Nicotiana attenuata A4A49_63878 R-NAT-1124598-4 A4A49_63878 [cytosol] R-NAT-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119300 Glycolipid desaturation none Nicotiana attenuata A4A49_63999 R-NAT-1129187 A4A49_63999 [cytosol] R-NAT-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119276 Choline biosynthesis III none Nicotiana attenuata A4A49_64083 R-NAT-9826680-5 A4A49_64083 [nucleoplasm] R-NAT-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Nicotiana attenuata A4A49_64104 R-NAT-6788172-2 A4A49_64104 [nucleoplasm] R-NAT-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-6788019 Salicylic acid signaling none Nicotiana attenuata A4A49_64135 R-NAT-9612372 A4A49_64135 [mitochondrial matrix] R-NAT-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119612 Cysteine degradation none Nicotiana attenuata A4A49_64154 R-NAT-5632111-3 A4A49_64154 [cytosol] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_64154 R-NAT-5632216-3 phospho-A4A49_64154 [cytosol] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_64154 R-NAT-5632145-3 phospho-A4A49_64154 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_64185 R-NAT-1126307-3 A4A49_64185 [cytosol] R-NAT-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119370 Sterol biosynthesis none Nicotiana attenuata A4A49_64290 R-NAT-1126728-2 A4A49_64290 [plastid stroma] R-NAT-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119424 Plastid glycolysis none Nicotiana attenuata A4A49_64458 R-NAT-9618056-4 A4A49_64458 [plasma membrane] R-NAT-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9618218 Arsenic uptake and detoxification none Nicotiana attenuata A4A49_64483 R-NAT-1123757-2 A4A49_64483 [cytosol] R-NAT-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119473 Cytokinins-O-glucoside biosynthesis none Nicotiana attenuata A4A49_64565 R-NAT-5632264 A4A49_64565 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_64719 R-NAT-5632120-3 A4A49_64719 [nucleoplasm] R-NAT-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-5632095 Brassinosteroid signaling none Nicotiana attenuata A4A49_64722 R-NAT-1127597 A4A49_64722 [cytosol] R-NAT-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119615 Mevalonate pathway none Nicotiana attenuata A4A49_64783 R-NAT-9924407-6 EXPB5 [basolateral plasma membrane] R-NAT-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924451 Shoot (tiller) formation and regulation of tiller angle none Nicotiana attenuata A4A49_64962 R-NAT-4752546-3 A4A49_64962 [plastid stroma] R-NAT-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119498 Phylloquinone biosynthesis none Nicotiana attenuata A4A49_64985 R-NAT-8987531 A4A49_64985 [chloroplast] R-NAT-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119312 Photorespiration none Nicotiana attenuata A4A49_64985 R-NAT-1125951 A4A49_64985 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_64987 R-NAT-8987531-4 A4A49_64987 [chloroplast] R-NAT-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119312 Photorespiration none Nicotiana attenuata A4A49_64987 R-NAT-1125951-4 A4A49_64987 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_65039 R-NAT-1130327-5 A4A49_65039 [cytosol] R-NAT-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119586 Cyanate degradation none Nicotiana attenuata A4A49_65392 R-NAT-9025430-2 A4A49_65392 [endoplasmic reticulum membrane] R-NAT-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119325 Sphingolipid metabolism none Nicotiana attenuata A4A49_65499 R-NAT-8987531-5 A4A49_65499 [chloroplast] R-NAT-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119312 Photorespiration none Nicotiana attenuata A4A49_65499 R-NAT-1125951-5 A4A49_65499 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_65500 R-NAT-8987531-2 A4A49_65500 [chloroplast] R-NAT-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119312 Photorespiration none Nicotiana attenuata A4A49_65500 R-NAT-1125951-2 A4A49_65500 [plastid stroma] R-NAT-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-1119519 Calvin cycle none Nicotiana attenuata A4A49_65502 R-NAT-9924407-8 EXPB5 [basolateral plasma membrane] R-NAT-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-NAT-9924451 Shoot (tiller) formation and regulation of tiller angle none Nicotiana attenuata A4U43_C01F10350 R-AOF-5221147 A4U43_C01F10350 [cytosol] R-AOF-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-3899351 Abscisic acid (ABA) mediated signaling none Asparagus officinalis A4U43_C01F10590 R-AOF-9918274 SBE1 [amyloplast] R-AOF-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119477 Starch biosynthesis none Asparagus officinalis A4U43_C01F10590 R-AOF-9626342 A4U43_C01F10590 [plastid stroma] R-AOF-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9626305 Regulatory network of nutrient accumulation none Asparagus officinalis A4U43_C01F10690 R-AOF-1127922 A4U43_C01F10690 [cytosol] R-AOF-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119370 Sterol biosynthesis none Asparagus officinalis A4U43_C01F11310 R-AOF-5632174 A4U43_C01F11310 [nucleoplasm] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C01F11310 R-AOF-5632174 A4U43_C01F11310 [nucleoplasm] R-AOF-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-6787011 Jasmonic acid signaling none Asparagus officinalis A4U43_C01F11310 R-AOF-5632174 A4U43_C01F11310 [nucleoplasm] R-AOF-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9608575 Reproductive meristem phase change none Asparagus officinalis A4U43_C01F13070 R-AOF-1128197 A4U43_C01F13070 [plastid stroma] R-AOF-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119430 Chorismate biosynthesis none Asparagus officinalis A4U43_C01F13620 R-AOF-5633332 A4U43_C01F13620 [plastid stroma] R-AOF-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5633340 Citrulline-nitric oxide cycle none Asparagus officinalis A4U43_C01F1380 R-AOF-8986682-2 A4U43_C01F1380 [extracellular region] R-AOF-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8986768 Anther and pollen development none Asparagus officinalis A4U43_C01F15190 R-AOF-1125259 A4U43_C01F15190 [cytosol] R-AOF-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119428 GDP-D-rhamnose biosynthesis none Asparagus officinalis A4U43_C01F15190 R-AOF-1125259 A4U43_C01F15190 [cytosol] R-AOF-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Asparagus officinalis A4U43_C01F15600 R-AOF-5632319 phospho-A4U43_C01F15600 [plasma membrane] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C01F16410 R-AOF-1126888 A4U43_C01F16410 [cytosol] R-AOF-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119360 Fructan biosynthesis none Asparagus officinalis A4U43_C01F16870 R-AOF-9645828 A4U43_C01F16870 [nucleoplasm] R-AOF-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9645850 Activation of pre-replication complex none Asparagus officinalis A4U43_C01F16870 R-AOF-9645828 A4U43_C01F16870 [nucleoplasm] R-AOF-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675824 DNA replication Initiation none Asparagus officinalis A4U43_C01F17120 R-AOF-1125698 A4U43_C01F17120 [cytosol] R-AOF-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119436 Peptidoglycan biosynthesis I none Asparagus officinalis A4U43_C01F17660 R-AOF-5633387 A4U43_C01F17660 [mitochondrial matrix] R-AOF-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119445 Beta-alanine biosynthesis II none Asparagus officinalis A4U43_C01F18040 R-AOF-9675391-3 A4U43_C01F18040 [nucleoplasm] R-AOF-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675508 Root elongation none Asparagus officinalis A4U43_C01F18330 R-AOF-1128906 A4U43_C01F18330 [cytosol] R-AOF-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119444 Canavanine biosynthesis none Asparagus officinalis A4U43_C01F18650 R-AOF-5632268-2 A4U43_C01F18650 [nucleoplasm] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C01F18770 R-AOF-9645866-2 A4U43_C01F18770 [nucleoplasm] R-AOF-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9645850 Activation of pre-replication complex none Asparagus officinalis A4U43_C01F18770 R-AOF-9645866-2 A4U43_C01F18770 [nucleoplasm] R-AOF-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675824 DNA replication Initiation none Asparagus officinalis A4U43_C01F18980 R-AOF-1128586 A4U43_C01F18980 [amyloplast] R-AOF-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119477 Starch biosynthesis none Asparagus officinalis A4U43_C01F19490 R-AOF-9675827 A4U43_C01F19490 [nucleoplasm] R-AOF-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675782 Maturation none Asparagus officinalis A4U43_C01F19490 R-AOF-9675827 A4U43_C01F19490 [nucleoplasm] R-AOF-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675815 Leading strand synthesis none Asparagus officinalis A4U43_C01F19490 R-AOF-9675827 A4U43_C01F19490 [nucleoplasm] R-AOF-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675885 Lagging strand synthesis none Asparagus officinalis A4U43_C01F20660 R-AOF-1127015 A4U43_C01F20660 [cytosol] R-AOF-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119334 Ethylene biosynthesis from methionine none Asparagus officinalis A4U43_C01F20660 R-AOF-1127015 A4U43_C01F20660 [cytosol] R-AOF-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119624 Methionine salvage pathway none Asparagus officinalis A4U43_C01F20760 R-AOF-1127523 A4U43_C01F20760 [cytosol] R-AOF-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Asparagus officinalis A4U43_C01F21040 R-AOF-1128678 A4U43_C01F21040 [cytosol] R-AOF-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119292 Cytokinins 7-N-glucoside biosynthesis none Asparagus officinalis A4U43_C01F21040 R-AOF-1128678 A4U43_C01F21040 [cytosol] R-AOF-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119375 Cytokinins 9-N-glucoside biosynthesis none Asparagus officinalis A4U43_C01F21040 R-AOF-1128678 A4U43_C01F21040 [cytosol] R-AOF-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119473 Cytokinins-O-glucoside biosynthesis none Asparagus officinalis A4U43_C01F2120 R-AOF-1129769 A4U43_C01F2120 [cytosol] R-AOF-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119332 Jasmonic acid biosynthesis none Asparagus officinalis A4U43_C01F2120 R-AOF-1129769 A4U43_C01F2120 [cytosol] R-AOF-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119618 13-LOX and 13-HPL pathway none Asparagus officinalis A4U43_C01F21530 R-AOF-1125058 A4U43_C01F21530 [nucleoplasm] R-AOF-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5608118 Auxin signalling none Asparagus officinalis A4U43_C01F2190 R-AOF-1129769-2 A4U43_C01F2190 [cytosol] R-AOF-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119332 Jasmonic acid biosynthesis none Asparagus officinalis A4U43_C01F2190 R-AOF-1129769-2 A4U43_C01F2190 [cytosol] R-AOF-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119618 13-LOX and 13-HPL pathway none Asparagus officinalis A4U43_C01F22630 R-AOF-6787113 A4U43_C01F22630 [nucleoplasm] R-AOF-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-6787011 Jasmonic acid signaling none Asparagus officinalis A4U43_C01F22780 R-AOF-5632120-3 A4U43_C01F22780 [nucleoplasm] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C01F22900 R-AOF-4415101 A4U43_C01F22900 [cytosol] R-AOF-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-3899351 Abscisic acid (ABA) mediated signaling none Asparagus officinalis A4U43_C01F22900 R-AOF-4415101 A4U43_C01F22900 [cytosol] R-AOF-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9639861 Development of root hair none Asparagus officinalis A4U43_C01F22930 R-AOF-1122351 A4U43_C01F22930 [cytosol] R-AOF-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119354 Asparagine biosynthesis III none Asparagus officinalis A4U43_C01F22930 R-AOF-5633281 A4U43_C01F22930 [cytosol] R-AOF-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119495 Citrulline biosynthesis none Asparagus officinalis A4U43_C01F22930 R-AOF-1122351 A4U43_C01F22930 [cytosol] R-AOF-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119553 Asparagine biosynthesis none Asparagus officinalis A4U43_C01F23440 R-AOF-5679401 A4U43_C01F23440 [nucleoplasm] R-AOF-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5679411 Gibberellin signaling none Asparagus officinalis A4U43_C01F23750 R-AOF-6788127 A4U43_C01F23750 [nucleoplasm] R-AOF-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-6788019 Salicylic acid signaling none Asparagus officinalis A4U43_C01F23750 R-AOF-6788179 A4U43_C01F23750 [cytosol] R-AOF-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-6788019 Salicylic acid signaling none Asparagus officinalis A4U43_C01F23840 R-AOF-4723660 A4U43_C01F23840 [plastid stroma] R-AOF-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119464 Methylerythritol phosphate pathway none Asparagus officinalis A4U43_C01F23840 R-AOF-1125869 A4U43_C01F23840 [cytosol] R-AOF-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119594 Pyridoxal 5'-phosphate biosynthesis none Asparagus officinalis A4U43_C01F23840 R-AOF-1125869 A4U43_C01F23840 [cytosol] R-AOF-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119629 Thiamine biosynthesis none Asparagus officinalis A4U43_C01F23980 R-AOF-5367743-2 A4U43_C01F23980 [cytosol] R-AOF-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5367729 Strigolactone biosynthesis none Asparagus officinalis A4U43_C01F23990 R-AOF-5367743 A4U43_C01F23990 [cytosol] R-AOF-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5367729 Strigolactone biosynthesis none Asparagus officinalis A4U43_C01F2540 R-AOF-9675426-2 A4U43_C01F2540 [nucleoplasm] R-AOF-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9030654 Primary root development none Asparagus officinalis A4U43_C01F25770 R-AOF-8934025 A4U43_C01F25770 [nucleoplasm] R-AOF-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8934036 Long day regulated expression of florigens none Asparagus officinalis A4U43_C01F25770 R-AOF-8934025 A4U43_C01F25770 [nucleoplasm] R-AOF-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8934108 Short day regulated expression of florigens none Asparagus officinalis A4U43_C01F25770 R-AOF-8934025 A4U43_C01F25770 [nucleoplasm] R-AOF-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8934257 Transition from vegetative to reproductive shoot apical meristem none Asparagus officinalis A4U43_C01F25770 R-AOF-9684733 A4U43_C01F25770 [cytosol] R-AOF-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8934257 Transition from vegetative to reproductive shoot apical meristem none Asparagus officinalis A4U43_C01F25770 R-AOF-9684733 A4U43_C01F25770 [cytosol] R-AOF-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9609102 Flower development none Asparagus officinalis A4U43_C01F25770 R-AOF-8934025 A4U43_C01F25770 [nucleoplasm] R-AOF-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9928946 Drought escape (DE) via ABA-independent pathway none Asparagus officinalis A4U43_C01F25770 R-AOF-8934025 A4U43_C01F25770 [nucleoplasm] R-AOF-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9928995 Drought escape (DE) via ABA-dependent pathway none Asparagus officinalis A4U43_C01F2580 R-AOF-5632251-2 A4U43_C01F2580 [nucleoplasm] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C01F25860 R-AOF-1122471-2 A4U43_C01F25860 [cytosol] R-AOF-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119276 Choline biosynthesis III none Asparagus officinalis A4U43_C01F26100 R-AOF-1127089 A4U43_C01F26100 [cytosol] R-AOF-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119465 Sucrose biosynthesis none Asparagus officinalis A4U43_C01F26500 R-AOF-6787202 A4U43_C01F26500 [cytosol] R-AOF-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-6787011 Jasmonic acid signaling none Asparagus officinalis A4U43_C01F26540 R-AOF-1125910-2 A4U43_C01F26540 [plastid stroma] R-AOF-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119367 Polyisoprenoid biosynthesis none Asparagus officinalis A4U43_C01F26780 R-AOF-1130162 A4U43_C01F26780 [chloroplast] R-AOF-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119494 Tryptophan biosynthesis none Asparagus officinalis A4U43_C01F26850 R-AOF-6787185 A4U43_C01F26850 [nucleoplasm] R-AOF-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-6787011 Jasmonic acid signaling none Asparagus officinalis A4U43_C01F26920 R-AOF-4788601 A4U43_C01F26920 [plastid stroma] R-AOF-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119509 Histidine biosynthesis I none Asparagus officinalis A4U43_C01F27030 R-AOF-9916252 OsEGT1 [nucleoplasm] R-AOF-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9916190 Root angle formation: elongation and curvature response none Asparagus officinalis A4U43_C01F27080 R-AOF-1123717 A4U43_C01F27080 [cytosol] R-AOF-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119395 Maackiain biosynthesis none Asparagus officinalis A4U43_C01F27080 R-AOF-1123717 A4U43_C01F27080 [cytosol] R-AOF-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119453 Medicarpin biosynthesis none Asparagus officinalis A4U43_C01F27120 R-AOF-5138486 A4U43_C01F27120 [plastid stroma] R-AOF-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119263 Arginine biosynthesis none Asparagus officinalis A4U43_C01F27120 R-AOF-1123709 A4U43_C01F27120 [cytosol] R-AOF-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119318 Proline biosynthesis V (from arginine) none Asparagus officinalis A4U43_C01F27120 R-AOF-1123709 A4U43_C01F27120 [cytosol] R-AOF-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119444 Canavanine biosynthesis none Asparagus officinalis A4U43_C01F27180 R-AOF-9639957-2 A4U43_C01F27180 [plasma membrane] R-AOF-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9639861 Development of root hair none Asparagus officinalis A4U43_C01F27670 R-AOF-9640745 A4U43_C01F27670 [nucleoplasm] R-AOF-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640882 Assembly of pre-replication complex none Asparagus officinalis A4U43_C01F27670 R-AOF-9640745 A4U43_C01F27670 [nucleoplasm] R-AOF-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9645850 Activation of pre-replication complex none Asparagus officinalis A4U43_C01F27670 R-AOF-9640745 A4U43_C01F27670 [nucleoplasm] R-AOF-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675824 DNA replication Initiation none Asparagus officinalis A4U43_C01F27740 R-AOF-1126916 A4U43_C01F27740 [plastid stroma] R-AOF-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119464 Methylerythritol phosphate pathway none Asparagus officinalis A4U43_C01F27760 R-AOF-1122347 A4U43_C01F27760 [cytosol] R-AOF-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119384 NAD biosynthesis I (from aspartate) none Asparagus officinalis A4U43_C01F27790 R-AOF-1125340 A4U43_C01F27790 [plastid stroma] R-AOF-1119274 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119274 Monoterpene biosynthesis none Asparagus officinalis A4U43_C01F27790 R-AOF-1125340 A4U43_C01F27790 [plastid stroma] R-AOF-1119593 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119593 Oleoresin monoterpene volatiles biosynthesis none Asparagus officinalis A4U43_C01F280 R-AOF-1122932-2 A4U43_C01F280 [cytosol] R-AOF-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119317 Spermine biosynthesis none Asparagus officinalis A4U43_C01F280 R-AOF-1122932-2 A4U43_C01F280 [cytosol] R-AOF-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119343 Spermidine biosynthesis none Asparagus officinalis A4U43_C01F280 R-AOF-1122932-2 A4U43_C01F280 [cytosol] R-AOF-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119446 Lysine degradation I none Asparagus officinalis A4U43_C01F28160 R-AOF-1127414 A4U43_C01F28160 [cytosol] R-AOF-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119265 Tetrahydrofolate biosynthesis I none Asparagus officinalis A4U43_C01F28330 R-AOF-5149676 A4U43_C01F28330 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C01F2840 R-AOF-1130347 A4U43_C01F2840 [nucleoplasm] R-AOF-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5608118 Auxin signalling none Asparagus officinalis A4U43_C01F2840 R-AOF-1130347 A4U43_C01F2840 [nucleoplasm] R-AOF-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9030680 Crown root development none Asparagus officinalis A4U43_C01F28820 R-AOF-8868990-3 A4U43_C01F28820 [endoplasmic reticulum membrane] R-AOF-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8868949 Intracellular auxin transport none Asparagus officinalis A4U43_C01F28880 R-AOF-9025372 A4U43_C01F28880 [endoplasmic reticulum membrane] R-AOF-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119402 Phospholipid biosynthesis I none Asparagus officinalis A4U43_C01F29310 R-AOF-1125540 A4U43_C01F29310 [cytosol] R-AOF-1119303 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119303 Pyridoxamine anabolism none Asparagus officinalis A4U43_C01F29310 R-AOF-1125540 A4U43_C01F29310 [cytosol] R-AOF-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119534 Pyridoxal 5'-phosphate salvage pathway none Asparagus officinalis A4U43_C01F2950 R-AOF-5632264-2 A4U43_C01F2950 [nucleoplasm] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C01F29570 R-AOF-1122403 A4U43_C01F29570 [amyloplast] R-AOF-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119477 Starch biosynthesis none Asparagus officinalis A4U43_C01F29790 R-AOF-1126531-2 A4U43_C01F29790 [cytosol] R-AOF-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119410 Ascorbate biosynthesis none Asparagus officinalis A4U43_C01F29790 R-AOF-1126531-2 A4U43_C01F29790 [cytosol] R-AOF-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119628 GDP-mannose metabolism none Asparagus officinalis A4U43_C01F29950 R-AOF-8987531-2 A4U43_C01F29950 [chloroplast] R-AOF-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119312 Photorespiration none Asparagus officinalis A4U43_C01F29950 R-AOF-1125951-2 A4U43_C01F29950 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C01F29960 R-AOF-8987531 A4U43_C01F29960 [chloroplast] R-AOF-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119312 Photorespiration none Asparagus officinalis A4U43_C01F29960 R-AOF-1125951 A4U43_C01F29960 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C01F3010 R-AOF-1128798 A4U43_C01F3010 [cytosol] R-AOF-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119331 Cysteine biosynthesis I none Asparagus officinalis A4U43_C01F31290 R-AOF-9918159 A4U43_C01F31290 [amyloplast] R-AOF-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119477 Starch biosynthesis none Asparagus officinalis A4U43_C01F31340 R-AOF-9607105 A4U43_C01F31340 [mitochondrion] R-AOF-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9607185 Generation of superoxide radicals none Asparagus officinalis A4U43_C01F31920 R-AOF-9640785 A4U43_C01F31920 [nucleoplasm] R-AOF-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640882 Assembly of pre-replication complex none Asparagus officinalis A4U43_C01F31920 R-AOF-9640785 A4U43_C01F31920 [nucleoplasm] R-AOF-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9645850 Activation of pre-replication complex none Asparagus officinalis A4U43_C01F32020 R-AOF-1130059 A4U43_C01F32020 [cytosol] R-AOF-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119262 Threonine biosynthesis from homoserine none Asparagus officinalis A4U43_C01F32500 R-AOF-1128989 A4U43_C01F32500 [plastid stroma] R-AOF-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119509 Histidine biosynthesis I none Asparagus officinalis A4U43_C01F32820 R-AOF-1130327 A4U43_C01F32820 [cytosol] R-AOF-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119586 Cyanate degradation none Asparagus officinalis A4U43_C01F32980 R-AOF-8987571 A4U43_C01F32980 [peroxisomal matrix] R-AOF-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119312 Photorespiration none Asparagus officinalis A4U43_C01F33390 R-AOF-6786917 A4U43_C01F33390 [cytosol] R-AOF-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-6787011 Jasmonic acid signaling none Asparagus officinalis A4U43_C01F3340 R-AOF-6787184 A4U43_C01F3340 [cytosol] R-AOF-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-6787011 Jasmonic acid signaling none Asparagus officinalis A4U43_C01F33520 R-AOF-1130152-2 A4U43_C01F33520 [cytosol] R-AOF-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119394 Pantothenate and coenzyme A biosynthesis III none Asparagus officinalis A4U43_C01F3390 R-AOF-1123059 A4U43_C01F3390 [cytosol] R-AOF-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119317 Spermine biosynthesis none Asparagus officinalis A4U43_C01F3390 R-AOF-1123059 A4U43_C01F3390 [cytosol] R-AOF-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119343 Spermidine biosynthesis none Asparagus officinalis A4U43_C01F34250 R-AOF-1128173 A4U43_C01F34250 [cytosol] R-AOF-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119437 Glutathione redox reactions I none Asparagus officinalis A4U43_C01F34550 R-AOF-1127414-2 A4U43_C01F34550 [cytosol] R-AOF-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119265 Tetrahydrofolate biosynthesis I none Asparagus officinalis A4U43_C01F34610 R-AOF-1124491 A4U43_C01F34610 [plasma membrane] R-AOF-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119314 Cellulose biosynthesis none Asparagus officinalis A4U43_C01F34750 R-AOF-1123733 A4U43_C01F34750 [cytosol] R-AOF-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119484 Folate polyglutamylation II none Asparagus officinalis A4U43_C01F35220 R-AOF-1123596 A4U43_C01F35220 [plastid stroma] R-AOF-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119509 Histidine biosynthesis I none Asparagus officinalis A4U43_C01F35680 R-AOF-9640729 A4U43_C01F35680 [nucleoplasm] R-AOF-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640760 G1 phase none Asparagus officinalis A4U43_C01F35680 R-AOF-9640729 A4U43_C01F35680 [nucleoplasm] R-AOF-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640887 G1/S transition none Asparagus officinalis A4U43_C01F35750 R-AOF-1126998 A4U43_C01F35750 [cytosol] R-AOF-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119615 Mevalonate pathway none Asparagus officinalis A4U43_C01F35800 R-AOF-1127491 A4U43_C01F35800 [chloroplast] R-AOF-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119312 Photorespiration none Asparagus officinalis A4U43_C01F35830 R-AOF-1122832 A4U43_C01F35830 [plastid stroma] R-AOF-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119449 Carotenoid biosynthesis none Asparagus officinalis A4U43_C01F35950 R-AOF-1129175 A4U43_C01F35950 [amyloplast] R-AOF-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119477 Starch biosynthesis none Asparagus officinalis A4U43_C01F36050 R-AOF-1127562 A4U43_C01F36050 [amyloplast] R-AOF-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119477 Starch biosynthesis none Asparagus officinalis A4U43_C01F36050 R-AOF-1130466 A4U43_C01F36050 [cytosol] R-AOF-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119477 Starch biosynthesis none Asparagus officinalis A4U43_C01F36300 R-AOF-1127815 A4U43_C01F36300 [cytosol] R-AOF-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119450 Homocysteine biosynthesis none Asparagus officinalis A4U43_C01F3640 R-AOF-1126238 A4U43_C01F3640 [chloroplast] R-AOF-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119494 Tryptophan biosynthesis none Asparagus officinalis A4U43_C01F4000 R-AOF-1127526 A4U43_C01F4000 [cytosol] R-AOF-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119332 Jasmonic acid biosynthesis none Asparagus officinalis A4U43_C01F4190 R-AOF-1129926-2 A4U43_C01F4190 [cytosol] R-AOF-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Asparagus officinalis A4U43_C01F4330 R-AOF-9675391 A4U43_C01F4330 [nucleoplasm] R-AOF-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675508 Root elongation none Asparagus officinalis A4U43_C01F4470 R-AOF-1125734 A4U43_C01F4470 [cytosol] R-AOF-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119281 Aspartate biosynthesis I none Asparagus officinalis A4U43_C01F4470 R-AOF-5632000 A4U43_C01F4470 [plastid stroma] R-AOF-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119553 Asparagine biosynthesis none Asparagus officinalis A4U43_C01F4560 R-AOF-5654957 A4U43_C01F4560 [Golgi lumen] R-AOF-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5654909 Xylan biosynthesis none Asparagus officinalis A4U43_C01F4590 R-AOF-1128214-2 A4U43_C01F4590 [nucleoplasm] R-AOF-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5608118 Auxin signalling none Asparagus officinalis A4U43_C01F4920 R-AOF-1123745 A4U43_C01F4920 [endoplasmic reticulum membrane] R-AOF-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119260 Cardiolipin biosynthesis none Asparagus officinalis A4U43_C01F4920 R-AOF-1123745 A4U43_C01F4920 [endoplasmic reticulum membrane] R-AOF-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119402 Phospholipid biosynthesis I none Asparagus officinalis A4U43_C01F5470 R-AOF-1123161 A4U43_C01F5470 [chloroplast] R-AOF-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119494 Tryptophan biosynthesis none Asparagus officinalis A4U43_C01F5480 R-AOF-1127065-2 A4U43_C01F5480 [cytosol] R-AOF-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119304 Putrescine biosynthesis II none Asparagus officinalis A4U43_C01F5540 R-AOF-1127254 A4U43_C01F5540 [cytosol] R-AOF-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119317 Spermine biosynthesis none Asparagus officinalis A4U43_C01F5540 R-AOF-1127254 A4U43_C01F5540 [cytosol] R-AOF-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119343 Spermidine biosynthesis none Asparagus officinalis A4U43_C01F5800 R-AOF-4827046 A4U43_C01F5800 [plastid stroma] R-AOF-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-4827054 Tetrapyrrole biosynthesis I none Asparagus officinalis A4U43_C01F5840 R-AOF-1125533 A4U43_C01F5840 [cytosol] R-AOF-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119304 Putrescine biosynthesis II none Asparagus officinalis A4U43_C01F5880 R-AOF-9640767 A4U43_C01F5880 [nucleoplasm] R-AOF-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640882 Assembly of pre-replication complex none Asparagus officinalis A4U43_C01F5880 R-AOF-9640767 A4U43_C01F5880 [nucleoplasm] R-AOF-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9645850 Activation of pre-replication complex none Asparagus officinalis A4U43_C01F5880 R-AOF-9640767 A4U43_C01F5880 [nucleoplasm] R-AOF-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675824 DNA replication Initiation none Asparagus officinalis A4U43_C01F6660 R-AOF-8868961 A4U43_C01F6660 [plant-type vacuole membrane] R-AOF-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8868949 Intracellular auxin transport none Asparagus officinalis A4U43_C01F6840 R-AOF-9640782 A4U43_C01F6840 [nucleoplasm] R-AOF-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640882 Assembly of pre-replication complex none Asparagus officinalis A4U43_C01F6900 R-AOF-1124809 A4U43_C01F6900 [cytosol] R-AOF-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119486 IAA biosynthesis I none Asparagus officinalis A4U43_C01F7170 R-AOF-1128385 A4U43_C01F7170 [nucleoplasm] R-AOF-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5608118 Auxin signalling none Asparagus officinalis A4U43_C01F7240 R-AOF-3240749 A4U43_C01F7240 [cytosol] R-AOF-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Asparagus officinalis A4U43_C01F7240 R-AOF-9681918 A4U43_C01F7240 [cytosol] R-AOF-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119574 UDP-L-arabinose biosynthesis and transport none Asparagus officinalis A4U43_C01F7490 R-AOF-1123092-2 A4U43_C01F7490 [cytosol] R-AOF-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119278 PRPP biosynthesis I none Asparagus officinalis A4U43_C01F770 R-AOF-1122463 A4U43_C01F770 [cytosol] R-AOF-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119321 Glycerol degradation I none Asparagus officinalis A4U43_C01F7920 R-AOF-5632268 A4U43_C01F7920 [nucleoplasm] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C01F8200 R-AOF-1126373 A4U43_C01F8200 [cytosol] R-AOF-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Asparagus officinalis A4U43_C01F8270 R-AOF-1130235-2 A4U43_C01F8270 [cytosol] R-AOF-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119261 Salicylate biosynthesis none Asparagus officinalis A4U43_C01F8270 R-AOF-1130235-2 A4U43_C01F8270 [cytosol] R-AOF-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119418 Suberin biosynthesis none Asparagus officinalis A4U43_C01F8270 R-AOF-1130235-2 A4U43_C01F8270 [cytosol] R-AOF-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119582 Phenylpropanoid biosynthesis, initial reactions none Asparagus officinalis A4U43_C01F9010 R-AOF-1125556 A4U43_C01F9010 [cytosol] R-AOF-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119410 Ascorbate biosynthesis none Asparagus officinalis A4U43_C01F9010 R-AOF-1125556 A4U43_C01F9010 [cytosol] R-AOF-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119628 GDP-mannose metabolism none Asparagus officinalis A4U43_C01F9490 R-AOF-5632121-2 A4U43_C01F9490 [nucleoplasm] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C01F9750 R-AOF-5138489 A4U43_C01F9750 [plastid stroma] R-AOF-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119263 Arginine biosynthesis none Asparagus officinalis A4U43_C01F9750 R-AOF-1127893 A4U43_C01F9750 [cytosol] R-AOF-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119444 Canavanine biosynthesis none Asparagus officinalis A4U43_C01F9750 R-AOF-5138489 A4U43_C01F9750 [plastid stroma] R-AOF-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119622 Arginine biosynthesis II (acetyl cycle) none Asparagus officinalis A4U43_C01F9750 R-AOF-5138489 A4U43_C01F9750 [plastid stroma] R-AOF-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5633340 Citrulline-nitric oxide cycle none Asparagus officinalis A4U43_C01F9870 R-AOF-1125564 A4U43_C01F9870 [cytosol] R-AOF-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119291 Nitrate assimilation none Asparagus officinalis A4U43_C01F9870 R-AOF-1125564 A4U43_C01F9870 [cytosol] R-AOF-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119293 Glutamine biosynthesis I none Asparagus officinalis A4U43_C01F9870 R-AOF-1125564 A4U43_C01F9870 [cytosol] R-AOF-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119443 Ammonia assimilation cycle none Asparagus officinalis A4U43_C01F9880 R-AOF-1125612 A4U43_C01F9880 [cytosol] R-AOF-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119353 Linear furanocoumarin biosynthesis none Asparagus officinalis A4U43_C02F10210 R-AOF-1124939 A4U43_C02F10210 [cytosol] R-AOF-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119540 Leucine biosynthesis none Asparagus officinalis A4U43_C02F10940 R-AOF-9646043 A4U43_C02F10940 [nucleoplasm] R-AOF-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9645850 Activation of pre-replication complex none Asparagus officinalis A4U43_C02F10940 R-AOF-9646043 A4U43_C02F10940 [nucleoplasm] R-AOF-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675782 Maturation none Asparagus officinalis A4U43_C02F10940 R-AOF-9646043 A4U43_C02F10940 [nucleoplasm] R-AOF-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675815 Leading strand synthesis none Asparagus officinalis A4U43_C02F10940 R-AOF-9646043 A4U43_C02F10940 [nucleoplasm] R-AOF-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675824 DNA replication Initiation none Asparagus officinalis A4U43_C02F10940 R-AOF-9646043 A4U43_C02F10940 [nucleoplasm] R-AOF-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675885 Lagging strand synthesis none Asparagus officinalis A4U43_C02F10980 R-AOF-1125417 A4U43_C02F10980 [cytosol] R-AOF-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119265 Tetrahydrofolate biosynthesis I none Asparagus officinalis A4U43_C02F10980 R-AOF-1125417 A4U43_C02F10980 [cytosol] R-AOF-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119523 Tetrahydrofolate biosynthesis II none Asparagus officinalis A4U43_C02F11720 R-AOF-1127382-3 A4U43_C02F11720 [cytosol] R-AOF-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119460 Isoleucine biosynthesis from threonine none Asparagus officinalis A4U43_C02F11720 R-AOF-1127382-3 A4U43_C02F11720 [cytosol] R-AOF-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119600 Valine biosynthesis none Asparagus officinalis A4U43_C02F11800 R-AOF-1130059-2 A4U43_C02F11800 [cytosol] R-AOF-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119262 Threonine biosynthesis from homoserine none Asparagus officinalis A4U43_C02F11890 R-AOF-1128606-2 A4U43_C02F11890 [mitochondrial matrix] R-AOF-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119365 Lysine degradation II none Asparagus officinalis A4U43_C02F11890 R-AOF-1173244-2 A4U43_C02F11890 [mitochondrial matrix] R-AOF-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119533 TCA cycle (plant) none Asparagus officinalis A4U43_C02F12120 R-AOF-8879006 A4U43_C02F12120 [nucleoplasm] R-AOF-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8879007 Response to cold temperature none Asparagus officinalis A4U43_C02F12220 R-AOF-9675272-2 A4U43_C02F12220 [plasma membrane] R-AOF-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9030654 Primary root development none Asparagus officinalis A4U43_C02F12420 R-AOF-9645907 A4U43_C02F12420 [nucleoplasm] R-AOF-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9645850 Activation of pre-replication complex none Asparagus officinalis A4U43_C02F12420 R-AOF-9645907 A4U43_C02F12420 [nucleoplasm] R-AOF-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675824 DNA replication Initiation none Asparagus officinalis A4U43_C02F12550 R-AOF-1126387 A4U43_C02F12550 [cytosol] R-AOF-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119295 Homoserine biosynthesis none Asparagus officinalis A4U43_C02F13150 R-AOF-9608678 A4U43_C02F13150 [cytosol] R-AOF-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9608575 Reproductive meristem phase change none Asparagus officinalis A4U43_C02F13150 R-AOF-8986843 A4U43_C02F13150 [nucleoplasm] R-AOF-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9608575 Reproductive meristem phase change none Asparagus officinalis A4U43_C02F13540 R-AOF-1130006 A4U43_C02F13540 [plastid stroma] R-AOF-1119569 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119569 Kievitone biosynthesis none Asparagus officinalis A4U43_C02F1400 R-AOF-9684723-2 A4U43_C02F1400 [cytosol] R-AOF-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9609102 Flower development none Asparagus officinalis A4U43_C02F15540 R-AOF-1129029-2 A4U43_C02F15540 [cytosol] R-AOF-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119501 S-adenosyl-L-methionine cycle none Asparagus officinalis A4U43_C02F1560 R-AOF-1129055 A4U43_C02F1560 [mitochondrial matrix] R-AOF-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119533 TCA cycle (plant) none Asparagus officinalis A4U43_C02F15940 R-AOF-9930255 MPK15 [nucleoplasm] R-AOF-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9766881 TF network involved in salinity response none Asparagus officinalis A4U43_C02F16090 R-AOF-9025492 A4U43_C02F16090 [endoplasmic reticulum membrane] R-AOF-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119325 Sphingolipid metabolism none Asparagus officinalis A4U43_C02F16090 R-AOF-1126933 A4U43_C02F16090 [cytosol] R-AOF-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119610 Biotin biosynthesis II none Asparagus officinalis A4U43_C02F16580 R-AOF-9930242 A4U43_C02F16580 [nucleoplasm] R-AOF-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9766881 TF network involved in salinity response none Asparagus officinalis A4U43_C02F170 R-AOF-9640886 A4U43_C02F170 [nucleoplasm] R-AOF-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640882 Assembly of pre-replication complex none Asparagus officinalis A4U43_C02F170 R-AOF-9640886 A4U43_C02F170 [nucleoplasm] R-AOF-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9645850 Activation of pre-replication complex none Asparagus officinalis A4U43_C02F17470 R-AOF-9640734 A4U43_C02F17470 [nucleoplasm] R-AOF-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640887 G1/S transition none Asparagus officinalis A4U43_C02F17470 R-AOF-9640881 phospho-A4U43_C02F17470 [nucleoplasm] R-AOF-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640887 G1/S transition none Asparagus officinalis A4U43_C02F1750 R-AOF-1126172 A4U43_C02F1750 [cytosol] R-AOF-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119379 Flavin biosynthesis none Asparagus officinalis A4U43_C02F18370 R-AOF-9675464 A4U43_C02F18370 [nucleoplasm] R-AOF-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9030654 Primary root development none Asparagus officinalis A4U43_C02F18690 R-AOF-9681915 A4U43_C02F18690 [Golgi membrane] R-AOF-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119574 UDP-L-arabinose biosynthesis and transport none Asparagus officinalis A4U43_C02F19170 R-AOF-9930304 ACA7 [plasma membrane] R-AOF-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9766881 TF network involved in salinity response none Asparagus officinalis A4U43_C02F19180 R-AOF-9025331 A4U43_C02F19180 [cytosol] R-AOF-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119402 Phospholipid biosynthesis I none Asparagus officinalis A4U43_C02F19190 R-AOF-9916302 A4U43_C02F19190 [nucleoplasm] R-AOF-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9916190 Root angle formation: elongation and curvature response none Asparagus officinalis A4U43_C02F19290 R-AOF-8854445-2 A4U43_C02F19290 [cytosol] R-AOF-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119276 Choline biosynthesis III none Asparagus officinalis A4U43_C02F19720 R-AOF-9025819-2 A4U43_C02F19720 [plasma membrane] R-AOF-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9025727 Iron uptake and transport in root vascular system none Asparagus officinalis A4U43_C02F19730 R-AOF-9025819-3 A4U43_C02F19730 [plasma membrane] R-AOF-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9025727 Iron uptake and transport in root vascular system none Asparagus officinalis A4U43_C02F19770 R-AOF-9025819 A4U43_C02F19770 [plasma membrane] R-AOF-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9025727 Iron uptake and transport in root vascular system none Asparagus officinalis A4U43_C02F19910 R-AOF-1129924-2 A4U43_C02F19910 [cytosol] R-AOF-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119342 Gamma-glutamyl cycle none Asparagus officinalis A4U43_C02F19910 R-AOF-1129924-2 A4U43_C02F19910 [cytosol] R-AOF-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119483 Glutathione biosynthesis none Asparagus officinalis A4U43_C02F20010 R-AOF-6788041 A4U43_C02F20010 [nucleoplasm] R-AOF-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-6788019 Salicylic acid signaling none Asparagus officinalis A4U43_C02F20050 R-AOF-9025819-4 A4U43_C02F20050 [plasma membrane] R-AOF-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9025727 Iron uptake and transport in root vascular system none Asparagus officinalis A4U43_C02F20120 R-AOF-9658729 A4U43_C02F20120 [cytosol] R-AOF-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119389 Phenylalanine biosynthesis I none Asparagus officinalis A4U43_C02F20120 R-AOF-9658729 A4U43_C02F20120 [cytosol] R-AOF-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119506 tyrosine degradation I none Asparagus officinalis A4U43_C02F20290 R-AOF-5632341 A4U43_C02F20290 [cytosol] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C02F20290 R-AOF-5632221 phospho-A4U43_C02F20290 [cytosol] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C02F20290 R-AOF-5632170 phospho-A4U43_C02F20290 [nucleoplasm] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C02F20480 R-AOF-1127695 A4U43_C02F20480 [plastid stroma] R-AOF-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119430 Chorismate biosynthesis none Asparagus officinalis A4U43_C02F20510 R-AOF-1124206-2 A4U43_C02F20510 [cytosol] R-AOF-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119403 Removal of superoxide radicals none Asparagus officinalis A4U43_C02F20510 R-AOF-1124206-2 A4U43_C02F20510 [cytosol] R-AOF-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9611432 Recognition of fungal and bacterial pathogens and immunity response none Asparagus officinalis A4U43_C02F2140 R-AOF-9639874 A4U43_C02F2140 [plasma membrane] R-AOF-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9639861 Development of root hair none Asparagus officinalis A4U43_C02F220 R-AOF-6787181 A4U43_C02F220 [cytosol] R-AOF-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-6787011 Jasmonic acid signaling none Asparagus officinalis A4U43_C02F22230 R-AOF-5606478 A4U43_C02F22230 [plastid stroma] R-AOF-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119419 Lysine biosynthesis VI none Asparagus officinalis A4U43_C02F22440 R-AOF-8986605 A4U43_C02F22440 [mitochondrial matrix] R-AOF-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119312 Photorespiration none Asparagus officinalis A4U43_C02F22440 R-AOF-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-AOF-1119351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119351 Mitochondrial pyruvate metabolism none Asparagus officinalis A4U43_C02F22440 R-AOF-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-AOF-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119533 TCA cycle (plant) none Asparagus officinalis A4U43_C02F22650 R-AOF-1122851-2 A4U43_C02F22650 [nucleoplasm] R-AOF-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5608118 Auxin signalling none Asparagus officinalis A4U43_C02F22720 R-AOF-9826674-2 A4U43_C02F22720 [nucleoplasm] R-AOF-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Asparagus officinalis A4U43_C02F22940 R-AOF-1129723 A4U43_C02F22940 [chloroplast] R-AOF-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119494 Tryptophan biosynthesis none Asparagus officinalis A4U43_C02F2670 R-AOF-9025487 A4U43_C02F2670 [cytosol] R-AOF-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119325 Sphingolipid metabolism none Asparagus officinalis A4U43_C02F3950 R-AOF-9025430-2 A4U43_C02F3950 [endoplasmic reticulum membrane] R-AOF-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119325 Sphingolipid metabolism none Asparagus officinalis A4U43_C02F430 R-AOF-9640689 A4U43_C02F430 [nucleoplasm] R-AOF-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675782 Maturation none Asparagus officinalis A4U43_C02F430 R-AOF-9640689 A4U43_C02F430 [nucleoplasm] R-AOF-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675815 Leading strand synthesis none Asparagus officinalis A4U43_C02F430 R-AOF-9640689 A4U43_C02F430 [nucleoplasm] R-AOF-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675885 Lagging strand synthesis none Asparagus officinalis A4U43_C02F450 R-AOF-9658611 A4U43_C02F450 [plastid stroma] R-AOF-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119263 Arginine biosynthesis none Asparagus officinalis A4U43_C02F450 R-AOF-9658611 A4U43_C02F450 [plastid stroma] R-AOF-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119539 Ornithine biosynthesis none Asparagus officinalis A4U43_C02F450 R-AOF-9658611 A4U43_C02F450 [plastid stroma] R-AOF-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119622 Arginine biosynthesis II (acetyl cycle) none Asparagus officinalis A4U43_C02F5140 R-AOF-1123563 A4U43_C02F5140 [cytosol] R-AOF-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119379 Flavin biosynthesis none Asparagus officinalis A4U43_C02F5250 R-AOF-1129818 A4U43_C02F5250 [mitochondrial matrix] R-AOF-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119365 Lysine degradation II none Asparagus officinalis A4U43_C02F5250 R-AOF-1173242 A4U43_C02F5250 [mitochondrial matrix] R-AOF-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119533 TCA cycle (plant) none Asparagus officinalis A4U43_C02F5340 R-AOF-1127353 A4U43_C02F5340 [cytosol] R-AOF-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119506 tyrosine degradation I none Asparagus officinalis A4U43_C02F5520 R-AOF-1127527 A4U43_C02F5520 [cytosol] R-AOF-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Asparagus officinalis A4U43_C02F5600 R-AOF-1122545 A4U43_C02F5600 [cytosol] R-AOF-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119331 Cysteine biosynthesis I none Asparagus officinalis A4U43_C02F5860 R-AOF-1125584 A4U43_C02F5860 [plastid stroma] R-AOF-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119509 Histidine biosynthesis I none Asparagus officinalis A4U43_C02F5910 R-AOF-1125309 A4U43_C02F5910 [nucleoplasm] R-AOF-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5608118 Auxin signalling none Asparagus officinalis A4U43_C02F6230 R-AOF-1122242 A4U43_C02F6230 [cytosol] R-AOF-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119267 Phenylalanine degradation III none Asparagus officinalis A4U43_C02F6580 R-AOF-1129851 A4U43_C02F6580 [mitochondrial matrix] R-AOF-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119533 TCA cycle (plant) none Asparagus officinalis A4U43_C02F6580 R-AOF-1129851 A4U43_C02F6580 [mitochondrial matrix] R-AOF-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119540 Leucine biosynthesis none Asparagus officinalis A4U43_C02F6680 R-AOF-8987574 A4U43_C02F6680 [mitochondrial matrix] R-AOF-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119311 Glycine biosynthesis I none Asparagus officinalis A4U43_C02F7300 R-AOF-1125910 A4U43_C02F7300 [plastid stroma] R-AOF-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119367 Polyisoprenoid biosynthesis none Asparagus officinalis A4U43_C02F8000 R-AOF-6787863-2 A4U43_C02F8000 [nucleoplasm] R-AOF-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-6788019 Salicylic acid signaling none Asparagus officinalis A4U43_C02F8150 R-AOF-1125374 A4U43_C02F8150 [cytosol] R-AOF-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119586 Cyanate degradation none Asparagus officinalis A4U43_C02F9080 R-AOF-1127916-2 A4U43_C02F9080 [plastid stroma] R-AOF-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119367 Polyisoprenoid biosynthesis none Asparagus officinalis A4U43_C02F9080 R-AOF-1127916-2 A4U43_C02F9080 [plastid stroma] R-AOF-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119615 Mevalonate pathway none Asparagus officinalis A4U43_C02F910 R-AOF-1127913-3 A4U43_C02F910 [cytosol] R-AOF-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119495 Citrulline biosynthesis none Asparagus officinalis A4U43_C02F910 R-AOF-1127913-3 A4U43_C02F910 [cytosol] R-AOF-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119631 Proline biosynthesis I none Asparagus officinalis A4U43_C02F9880 R-AOF-1122785-3 A4U43_C02F9880 [cytosol] R-AOF-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119273 Lysine biosynthesis I none Asparagus officinalis A4U43_C02F9880 R-AOF-1126726-4 A4U43_C02F9880 [cytosol] R-AOF-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119273 Lysine biosynthesis I none Asparagus officinalis A4U43_C02F9880 R-AOF-1122785-3 A4U43_C02F9880 [cytosol] R-AOF-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119283 Lysine biosynthesis II none Asparagus officinalis A4U43_C02F9880 R-AOF-1126726-4 A4U43_C02F9880 [cytosol] R-AOF-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119283 Lysine biosynthesis II none Asparagus officinalis A4U43_C02F9880 R-AOF-1122785-3 A4U43_C02F9880 [cytosol] R-AOF-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119570 Cytosolic glycolysis none Asparagus officinalis A4U43_C03F10300 R-AOF-1128707 A4U43_C03F10300 [cytosol] R-AOF-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Asparagus officinalis A4U43_C03F10300 R-AOF-1128707 A4U43_C03F10300 [cytosol] R-AOF-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119370 Sterol biosynthesis none Asparagus officinalis A4U43_C03F10300 R-AOF-1128707 A4U43_C03F10300 [cytosol] R-AOF-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119439 Cholesterol biosynthesis III (via desmosterol) none Asparagus officinalis A4U43_C03F10300 R-AOF-1128707 A4U43_C03F10300 [cytosol] R-AOF-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119559 Cholesterol biosynthesis I none Asparagus officinalis A4U43_C03F10410 R-AOF-2885386 A4U43_C03F10410 [cytosol] R-AOF-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119417 Stachyose biosynthesis none Asparagus officinalis A4U43_C03F10680 R-AOF-5149657-2 A4U43_C03F10680 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C03F10680 R-AOF-1129239-2 A4U43_C03F10680 [cytosol] R-AOF-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119570 Cytosolic glycolysis none Asparagus officinalis A4U43_C03F10690 R-AOF-5149643 A4U43_C03F10690 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C03F11090 R-AOF-8987548 A4U43_C03F11090 [peroxisomal matrix] R-AOF-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119312 Photorespiration none Asparagus officinalis A4U43_C03F11190 R-AOF-9675274-2 A4U43_C03F11190 [nucleoplasm] R-AOF-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9030654 Primary root development none Asparagus officinalis A4U43_C03F11400 R-AOF-9035727 A4U43_C03F11400 [cytosol] R-AOF-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9035605 Regulation of seed size none Asparagus officinalis A4U43_C03F11400 R-AOF-9035692 A4U43_C03F11400 [nucleoplasm] R-AOF-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9035605 Regulation of seed size none Asparagus officinalis A4U43_C03F12660 R-AOF-1123077 A4U43_C03F12660 [cytosol] R-AOF-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119458 Glutamate degradation none Asparagus officinalis A4U43_C03F12760 R-AOF-1124206 A4U43_C03F12760 [cytosol] R-AOF-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119403 Removal of superoxide radicals none Asparagus officinalis A4U43_C03F12760 R-AOF-1124206 A4U43_C03F12760 [cytosol] R-AOF-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9611432 Recognition of fungal and bacterial pathogens and immunity response none Asparagus officinalis A4U43_C03F12810 R-AOF-4415060 A4U43_C03F12810 [plasma membrane] R-AOF-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-3899351 Abscisic acid (ABA) mediated signaling none Asparagus officinalis A4U43_C03F12810 R-AOF-4415065 phospho-A4U43_C03F12810 [plasma membrane] R-AOF-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-3899351 Abscisic acid (ABA) mediated signaling none Asparagus officinalis A4U43_C03F13300 R-AOF-1123433 A4U43_C03F13300 [cytosol] R-AOF-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119332 Jasmonic acid biosynthesis none Asparagus officinalis A4U43_C03F13300 R-AOF-1123433 A4U43_C03F13300 [cytosol] R-AOF-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119618 13-LOX and 13-HPL pathway none Asparagus officinalis A4U43_C03F13860 R-AOF-1129561-2 A4U43_C03F13860 [cytosol] R-AOF-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119452 Galactose degradation II none Asparagus officinalis A4U43_C03F13860 R-AOF-1129561-2 A4U43_C03F13860 [cytosol] R-AOF-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119465 Sucrose biosynthesis none Asparagus officinalis A4U43_C03F14640 R-AOF-9626449 A4U43_C03F14640 [cytosol] R-AOF-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9626305 Regulatory network of nutrient accumulation none Asparagus officinalis A4U43_C03F15240 R-AOF-1122433 A4U43_C03F15240 [mitochondrial inner membrane] R-AOF-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119533 TCA cycle (plant) none Asparagus officinalis A4U43_C03F15500 R-AOF-1129111 A4U43_C03F15500 [cytosol] R-AOF-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119349 S-methylmethionine cycle none Asparagus officinalis A4U43_C03F15500 R-AOF-1129111 A4U43_C03F15500 [cytosol] R-AOF-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119400 Methionine biosynthesis II none Asparagus officinalis A4U43_C03F15780 R-AOF-1128804-2 A4U43_C03F15780 [cytosol] R-AOF-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119516 Trehalose biosynthesis I none Asparagus officinalis A4U43_C03F15860 R-AOF-1127738 A4U43_C03F15860 [cytosol] R-AOF-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119273 Lysine biosynthesis I none Asparagus officinalis A4U43_C03F15860 R-AOF-1127738 A4U43_C03F15860 [cytosol] R-AOF-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119283 Lysine biosynthesis II none Asparagus officinalis A4U43_C03F15860 R-AOF-5606514 A4U43_C03F15860 [plastid stroma] R-AOF-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119419 Lysine biosynthesis VI none Asparagus officinalis A4U43_C03F15870 R-AOF-1128319-2 A4U43_C03F15870 [cytosol] R-AOF-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119341 Galactosylcyclitol biosynthesis none Asparagus officinalis A4U43_C03F16060 R-AOF-1125038 A4U43_C03F16060 [plastid stroma] R-AOF-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119449 Carotenoid biosynthesis none Asparagus officinalis A4U43_C03F16340 R-AOF-5655007 A4U43_C03F16340 [Golgi lumen] R-AOF-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5655010 Xylogalacturonan biosynthesis none Asparagus officinalis A4U43_C03F16410 R-AOF-6787127 A4U43_C03F16410 [nucleoplasm] R-AOF-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-6787011 Jasmonic acid signaling none Asparagus officinalis A4U43_C03F16410 R-AOF-6787052 A4U43_C03F16410 [cytosol] R-AOF-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-6787011 Jasmonic acid signaling none Asparagus officinalis A4U43_C03F16420 R-AOF-1126269 A4U43_C03F16420 [mitochondrial matrix] R-AOF-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119479 Valine degradation none Asparagus officinalis A4U43_C03F16430 R-AOF-1126269-2 A4U43_C03F16430 [mitochondrial matrix] R-AOF-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119479 Valine degradation none Asparagus officinalis A4U43_C03F16860 R-AOF-1130101 A4U43_C03F16860 [amyloplast] R-AOF-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119477 Starch biosynthesis none Asparagus officinalis A4U43_C03F17450 R-AOF-5606521 A4U43_C03F17450 [plastid stroma] R-AOF-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119419 Lysine biosynthesis VI none Asparagus officinalis A4U43_C03F17510 R-AOF-1122934 A4U43_C03F17510 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C03F17800 R-AOF-1129964 A4U43_C03F17800 [cytosol] R-AOF-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119378 Myo-inositol biosynthesis none Asparagus officinalis A4U43_C03F17800 R-AOF-1129964 A4U43_C03F17800 [cytosol] R-AOF-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119434 Phytic acid biosynthesis (lipid-independent) none Asparagus officinalis A4U43_C03F18380 R-AOF-1122564-2 A4U43_C03F18380 [cytosol] R-AOF-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119473 Cytokinins-O-glucoside biosynthesis none Asparagus officinalis A4U43_C03F18410 R-AOF-1129697 A4U43_C03F18410 [cytosol] R-AOF-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119473 Cytokinins-O-glucoside biosynthesis none Asparagus officinalis A4U43_C03F18430 R-AOF-1122564 A4U43_C03F18430 [cytosol] R-AOF-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119473 Cytokinins-O-glucoside biosynthesis none Asparagus officinalis A4U43_C03F18530 R-AOF-1122295 A4U43_C03F18530 [cytosol] R-AOF-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119353 Linear furanocoumarin biosynthesis none Asparagus officinalis A4U43_C03F18730 R-AOF-9826680 A4U43_C03F18730 [nucleoplasm] R-AOF-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Asparagus officinalis A4U43_C03F18810 R-AOF-1124490 A4U43_C03F18810 [cytosol] R-AOF-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119534 Pyridoxal 5'-phosphate salvage pathway none Asparagus officinalis A4U43_C03F18810 R-AOF-1124490 A4U43_C03F18810 [cytosol] R-AOF-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119594 Pyridoxal 5'-phosphate biosynthesis none Asparagus officinalis A4U43_C03F18890 R-AOF-9640777 A4U43_C03F18890 [nucleoplasm] R-AOF-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640760 G1 phase none Asparagus officinalis A4U43_C03F18890 R-AOF-9640777 A4U43_C03F18890 [nucleoplasm] R-AOF-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640887 G1/S transition none Asparagus officinalis A4U43_C03F19300 R-AOF-1130210 A4U43_C03F19300 [cytosol] R-AOF-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119586 Cyanate degradation none Asparagus officinalis A4U43_C03F20990 R-AOF-1122261 A4U43_C03F20990 [plastid stroma] R-AOF-1119602 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119602 Phytyl-PP biosynthesis none Asparagus officinalis A4U43_C03F20990 R-AOF-1122261 A4U43_C03F20990 [plastid stroma] R-AOF-1119605 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119605 Chlorophyll a biosynthesis II none Asparagus officinalis A4U43_C03F21130 R-AOF-9640694 A4U43_C03F21130 [nucleoplasm] R-AOF-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640882 Assembly of pre-replication complex none Asparagus officinalis A4U43_C03F21130 R-AOF-9640694 A4U43_C03F21130 [nucleoplasm] R-AOF-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9645850 Activation of pre-replication complex none Asparagus officinalis A4U43_C03F21940 R-AOF-4415007 A4U43_C03F21940 [cytosol] R-AOF-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-3899351 Abscisic acid (ABA) mediated signaling none Asparagus officinalis A4U43_C03F21940 R-AOF-4415016 phospho-A4U43_C03F21940 [cytosol] R-AOF-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-3899351 Abscisic acid (ABA) mediated signaling none Asparagus officinalis A4U43_C03F21940 R-AOF-4415007 A4U43_C03F21940 [cytosol] R-AOF-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9639861 Development of root hair none Asparagus officinalis A4U43_C03F2350 R-AOF-8933710 A4U43_C03F2350 [nucleoplasm] R-AOF-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8933811 Circadian rhythm none Asparagus officinalis A4U43_C03F23640 R-AOF-9682527 A4U43_C03F23640 [cytosol] R-AOF-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119410 Ascorbate biosynthesis none Asparagus officinalis A4U43_C03F24080 R-AOF-1122974 A4U43_C03F24080 [mitochondrial matrix] R-AOF-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119479 Valine degradation none Asparagus officinalis A4U43_C03F24410 R-AOF-9639012 A4U43_C03F24410 [cytosol] R-AOF-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119434 Phytic acid biosynthesis (lipid-independent) none Asparagus officinalis A4U43_C03F24490 R-AOF-1123895 A4U43_C03F24490 [cytosol] R-AOF-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119334 Ethylene biosynthesis from methionine none Asparagus officinalis A4U43_C03F24490 R-AOF-1123895 A4U43_C03F24490 [cytosol] R-AOF-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119624 Methionine salvage pathway none Asparagus officinalis A4U43_C03F25280 R-AOF-1129600 A4U43_C03F25280 [cytosol] R-AOF-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119407 Ureide biosynthesis none Asparagus officinalis A4U43_C03F25980 R-AOF-9639016 A4U43_C03F25980 [cytosol] R-AOF-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119410 Ascorbate biosynthesis none Asparagus officinalis A4U43_C03F25980 R-AOF-9639016 A4U43_C03F25980 [cytosol] R-AOF-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119434 Phytic acid biosynthesis (lipid-independent) none Asparagus officinalis A4U43_C03F26270 R-AOF-9658573 A4U43_C03F26270 [endoplasmic reticulum lumen] R-AOF-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119502 Allantoin degradation none Asparagus officinalis A4U43_C03F26720 R-AOF-8933833 A4U43_C03F26720 [nucleoplasm] R-AOF-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8933811 Circadian rhythm none Asparagus officinalis A4U43_C03F26720 R-AOF-8933833 A4U43_C03F26720 [nucleoplasm] R-AOF-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9928995 Drought escape (DE) via ABA-dependent pathway none Asparagus officinalis A4U43_C03F27110 R-AOF-9826620 HOX12/ OsGT1 [nucleoplasm] R-AOF-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Asparagus officinalis A4U43_C03F27110 R-AOF-9826620 HOX12/ OsGT1 [nucleoplasm] R-AOF-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Asparagus officinalis A4U43_C03F27560 R-AOF-1123087 A4U43_C03F27560 [plasma membrane] R-AOF-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119314 Cellulose biosynthesis none Asparagus officinalis A4U43_C03F27600 R-AOF-1122398 A4U43_C03F27600 [amyloplast] R-AOF-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119477 Starch biosynthesis none Asparagus officinalis A4U43_C03F27940 R-AOF-1128337 A4U43_C03F27940 [plastid stroma] R-AOF-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119308 Momilactone biosynthesis none Asparagus officinalis A4U43_C03F27940 R-AOF-1128244 A4U43_C03F27940 [chloroplast] R-AOF-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119348 Ent-kaurene biosynthesis none Asparagus officinalis A4U43_C03F27960 R-AOF-1129781-2 A4U43_C03F27960 [chloroplast] R-AOF-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119494 Tryptophan biosynthesis none Asparagus officinalis A4U43_C03F28130 R-AOF-1127299 A4U43_C03F28130 [cytosol] R-AOF-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119298 Glutathione redox reactions II none Asparagus officinalis A4U43_C03F28130 R-AOF-1127299 A4U43_C03F28130 [cytosol] R-AOF-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119437 Glutathione redox reactions I none Asparagus officinalis A4U43_C03F2880 R-AOF-1129934 A4U43_C03F2880 [plastid stroma] R-AOF-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119430 Chorismate biosynthesis none Asparagus officinalis A4U43_C03F28960 R-AOF-1129781 A4U43_C03F28960 [chloroplast] R-AOF-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119494 Tryptophan biosynthesis none Asparagus officinalis A4U43_C03F29070 R-AOF-1128257 A4U43_C03F29070 [plastid stroma] R-AOF-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119529 Sulfate activation for sulfonation none Asparagus officinalis A4U43_C03F29750 R-AOF-9608693 A4U43_C03F29750 [cytosol] R-AOF-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9608575 Reproductive meristem phase change none Asparagus officinalis A4U43_C03F2990 R-AOF-9766892 SAPK1 [nucleoplasm] R-AOF-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9766881 TF network involved in salinity response none Asparagus officinalis A4U43_C03F30040 R-AOF-4752546 A4U43_C03F30040 [plastid stroma] R-AOF-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119498 Phylloquinone biosynthesis none Asparagus officinalis A4U43_C03F30050 R-AOF-8858063 A4U43_C03F30050 [plasma membrane] R-AOF-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8858053 Polar auxin transport none Asparagus officinalis A4U43_C03F30650 R-AOF-1129514-2 A4U43_C03F30650 [chloroplast] R-AOF-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119579 Glycine betaine biosynthesis III none Asparagus officinalis A4U43_C03F30670 R-AOF-9025492-3 A4U43_C03F30670 [endoplasmic reticulum membrane] R-AOF-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119325 Sphingolipid metabolism none Asparagus officinalis A4U43_C03F30670 R-AOF-1126933-3 A4U43_C03F30670 [cytosol] R-AOF-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119610 Biotin biosynthesis II none Asparagus officinalis A4U43_C03F30680 R-AOF-1129514 A4U43_C03F30680 [chloroplast] R-AOF-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119579 Glycine betaine biosynthesis III none Asparagus officinalis A4U43_C03F31220 R-AOF-5632157 A4U43_C03F31220 [nucleoplasm] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C03F31290 R-AOF-1126860 A4U43_C03F31290 [cytosol] R-AOF-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119321 Glycerol degradation I none Asparagus officinalis A4U43_C03F3180 R-AOF-1128950 A4U43_C03F3180 [cytosol] R-AOF-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119379 Flavin biosynthesis none Asparagus officinalis A4U43_C03F32110 R-AOF-1126794-2 A4U43_C03F32110 [cytosol] R-AOF-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119331 Cysteine biosynthesis I none Asparagus officinalis A4U43_C03F3480 R-AOF-1130456 A4U43_C03F3480 [plastid stroma] R-AOF-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119430 Chorismate biosynthesis none Asparagus officinalis A4U43_C03F3620 R-AOF-2960195 A4U43_C03F3620 [cytosol] R-AOF-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119410 Ascorbate biosynthesis none Asparagus officinalis A4U43_C03F3620 R-AOF-2960195 A4U43_C03F3620 [cytosol] R-AOF-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119570 Cytosolic glycolysis none Asparagus officinalis A4U43_C03F4180 R-AOF-9826669-2 OsYABBY6 [nucleoplasm] R-AOF-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Asparagus officinalis A4U43_C03F4360 R-AOF-1127467 A4U43_C03F4360 [cytosol] R-AOF-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119456 Brassinosteroid biosynthesis II none Asparagus officinalis A4U43_C03F4670 R-AOF-1125151-2 A4U43_C03F4670 [cytosol] R-AOF-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119400 Methionine biosynthesis II none Asparagus officinalis A4U43_C03F4670 R-AOF-1125151-2 A4U43_C03F4670 [cytosol] R-AOF-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119501 S-adenosyl-L-methionine cycle none Asparagus officinalis A4U43_C03F4760 R-AOF-9675838 A4U43_C03F4760 [nucleoplasm] R-AOF-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675815 Leading strand synthesis none Asparagus officinalis A4U43_C03F4920 R-AOF-9611864 A4U43_C03F4920 [mitochondrial matrix] R-AOF-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119479 Valine degradation none Asparagus officinalis A4U43_C03F5260 R-AOF-1128594 A4U43_C03F5260 [cytosol] R-AOF-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119349 S-methylmethionine cycle none Asparagus officinalis A4U43_C03F5260 R-AOF-1128594 A4U43_C03F5260 [cytosol] R-AOF-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119400 Methionine biosynthesis II none Asparagus officinalis A4U43_C03F5410 R-AOF-1127705 A4U43_C03F5410 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C03F5530 R-AOF-9682506 A4U43_C03F5530 [cytosol] R-AOF-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119410 Ascorbate biosynthesis none Asparagus officinalis A4U43_C03F5640 R-AOF-3321270 A4U43_C03F5640 [chloroplast inner membrane] R-AOF-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119287 Vitamin E biosynthesis none Asparagus officinalis A4U43_C03F5770 R-AOF-1129781-3 A4U43_C03F5770 [chloroplast] R-AOF-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119494 Tryptophan biosynthesis none Asparagus officinalis A4U43_C03F6120 R-AOF-1124484 A4U43_C03F6120 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C03F6160 R-AOF-1125489 A4U43_C03F6160 [Golgi membrane] R-AOF-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119428 GDP-D-rhamnose biosynthesis none Asparagus officinalis A4U43_C03F6160 R-AOF-1125489 A4U43_C03F6160 [Golgi membrane] R-AOF-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119574 UDP-L-arabinose biosynthesis and transport none Asparagus officinalis A4U43_C03F6160 R-AOF-1125489 A4U43_C03F6160 [Golgi membrane] R-AOF-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Asparagus officinalis A4U43_C03F6320 R-AOF-9025728 A4U43_C03F6320 [plasma membrane] R-AOF-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9025727 Iron uptake and transport in root vascular system none Asparagus officinalis A4U43_C03F6340 R-AOF-1128626 A4U43_C03F6340 [cytosol] R-AOF-1119581 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119581 Thiosulfate disproportionation III (rhodanese) none Asparagus officinalis A4U43_C03F6340 R-AOF-1128626 A4U43_C03F6340 [cytosol] R-AOF-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119612 Cysteine degradation none Asparagus officinalis A4U43_C03F640 R-AOF-9618131 A4U43_C03F640 [plasma membrane] R-AOF-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9618218 Arsenic uptake and detoxification none Asparagus officinalis A4U43_C03F6830 R-AOF-1124742 A4U43_C03F6830 [cytosol] R-AOF-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119410 Ascorbate biosynthesis none Asparagus officinalis A4U43_C03F6830 R-AOF-1124742 A4U43_C03F6830 [cytosol] R-AOF-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119570 Cytosolic glycolysis none Asparagus officinalis A4U43_C03F7280 R-AOF-1130302 A4U43_C03F7280 [cytosol] R-AOF-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119451 Xylose degradation none Asparagus officinalis A4U43_C03F7320 R-AOF-1125834 A4U43_C03F7320 [cytosol] R-AOF-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119379 Flavin biosynthesis none Asparagus officinalis A4U43_C03F7400 R-AOF-5083827 A4U43_C03F7400 [mitochondrial matrix] R-AOF-1119319 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119319 Alanine biosynthesis III none Asparagus officinalis A4U43_C03F7400 R-AOF-5083827 A4U43_C03F7400 [mitochondrial matrix] R-AOF-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119612 Cysteine degradation none Asparagus officinalis A4U43_C03F9710 R-AOF-1128069 A4U43_C03F9710 [cytosol] R-AOF-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Asparagus officinalis A4U43_C03F9710 R-AOF-1128069 A4U43_C03F9710 [cytosol] R-AOF-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Asparagus officinalis A4U43_C04F10090 R-AOF-9035614 A4U43_C04F10090 [cytosol] R-AOF-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9035605 Regulation of seed size none Asparagus officinalis A4U43_C04F10090 R-AOF-9035651 A4U43_C04F10090 [nucleoplasm] R-AOF-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9035605 Regulation of seed size none Asparagus officinalis A4U43_C04F1040 R-AOF-1128298 A4U43_C04F1040 [cytosol] R-AOF-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119271 Threonine degradation none Asparagus officinalis A4U43_C04F1040 R-AOF-1128298 A4U43_C04F1040 [cytosol] R-AOF-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119610 Biotin biosynthesis II none Asparagus officinalis A4U43_C04F10480 R-AOF-3321260 A4U43_C04F10480 [chloroplast stroma] R-AOF-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119287 Vitamin E biosynthesis none Asparagus officinalis A4U43_C04F10550 R-AOF-9025500 A4U43_C04F10550 [endoplasmic reticulum membrane] R-AOF-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119325 Sphingolipid metabolism none Asparagus officinalis A4U43_C04F11130 R-AOF-1128178 A4U43_C04F11130 [cytosol] R-AOF-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119322 Leucodelphinidin biosynthesis none Asparagus officinalis A4U43_C04F11130 R-AOF-1128178 A4U43_C04F11130 [cytosol] R-AOF-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Asparagus officinalis A4U43_C04F11130 R-AOF-9609575 A4U43_C04F11130 [endoplasmic reticulum membrane] R-AOF-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9609573 Tricin biosynthesis none Asparagus officinalis A4U43_C04F11600 R-AOF-1127509-2 A4U43_C04F11600 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C04F12050 R-AOF-1127989 A4U43_C04F12050 [plastid stroma] R-AOF-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119430 Chorismate biosynthesis none Asparagus officinalis A4U43_C04F12080 R-AOF-1127398 A4U43_C04F12080 [plasma membrane] R-AOF-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119314 Cellulose biosynthesis none Asparagus officinalis A4U43_C04F12080 R-AOF-1127398 A4U43_C04F12080 [plasma membrane] R-AOF-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9639861 Development of root hair none Asparagus officinalis A4U43_C04F13430 R-AOF-1124138-2 A4U43_C04F13430 [cytosol] R-AOF-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119394 Pantothenate and coenzyme A biosynthesis III none Asparagus officinalis A4U43_C04F13470 R-AOF-1124905 A4U43_C04F13470 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C04F13540 R-AOF-1124348 A4U43_C04F13540 [cytosol] R-AOF-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119465 Sucrose biosynthesis none Asparagus officinalis A4U43_C04F13840 R-AOF-9025712 A4U43_C04F13840 [cytosol] R-AOF-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9025754 Mugineic acid biosynthesis none Asparagus officinalis A4U43_C04F15090 R-AOF-4827081 A4U43_C04F15090 [plastid stroma] R-AOF-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-4827054 Tetrapyrrole biosynthesis I none Asparagus officinalis A4U43_C04F1510 R-AOF-1128528 A4U43_C04F1510 [plasma membrane] R-AOF-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119314 Cellulose biosynthesis none Asparagus officinalis A4U43_C04F1550 R-AOF-5683263 A4U43_C04F1550 [cytosol] R-AOF-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119586 Cyanate degradation none Asparagus officinalis A4U43_C04F15720 R-AOF-9611549 phospho-phosphorylated-CERK1 [plasma membrane] R-AOF-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9611432 Recognition of fungal and bacterial pathogens and immunity response none Asparagus officinalis A4U43_C04F15940 R-AOF-9640763 A4U43_C04F15940 [nucleoplasm] R-AOF-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640887 G1/S transition none Asparagus officinalis A4U43_C04F15940 R-AOF-9640885 phospho-A4U43_C04F15940 [nucleoplasm] R-AOF-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640887 G1/S transition none Asparagus officinalis A4U43_C04F16650 R-AOF-1123404 A4U43_C04F16650 [peroxisomal matrix] R-AOF-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119407 Ureide biosynthesis none Asparagus officinalis A4U43_C04F16750 R-AOF-9658611-2 A4U43_C04F16750 [plastid stroma] R-AOF-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119263 Arginine biosynthesis none Asparagus officinalis A4U43_C04F16750 R-AOF-9658611-2 A4U43_C04F16750 [plastid stroma] R-AOF-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119539 Ornithine biosynthesis none Asparagus officinalis A4U43_C04F16750 R-AOF-9658611-2 A4U43_C04F16750 [plastid stroma] R-AOF-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119622 Arginine biosynthesis II (acetyl cycle) none Asparagus officinalis A4U43_C04F17410 R-AOF-1124520 A4U43_C04F17410 [cytosol] R-AOF-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119278 PRPP biosynthesis I none Asparagus officinalis A4U43_C04F17470 R-AOF-9675878 A4U43_C04F17470 [nucleoplasm] R-AOF-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675782 Maturation none Asparagus officinalis A4U43_C04F17560 R-AOF-1123819 A4U43_C04F17560 [plastid stroma] R-AOF-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119464 Methylerythritol phosphate pathway none Asparagus officinalis A4U43_C04F18020 R-AOF-9640782-2 A4U43_C04F18020 [nucleoplasm] R-AOF-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640882 Assembly of pre-replication complex none Asparagus officinalis A4U43_C04F18230 R-AOF-9031256 A4U43_C04F18230 [endoplasmic reticulum lumen] R-AOF-9031225 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9031225 Response to phosphate deficiency none Asparagus officinalis A4U43_C04F18230 R-AOF-9031289 A4U43_C04F18230 [plasma membrane] R-AOF-9031225 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9031225 Response to phosphate deficiency none Asparagus officinalis A4U43_C04F18230 R-AOF-9031289 A4U43_C04F18230 [plasma membrane] R-AOF-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9618218 Arsenic uptake and detoxification none Asparagus officinalis A4U43_C04F18260 R-AOF-5225766 A4U43_C04F18260 [nucleoplasm] R-AOF-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5225756 Ethylene mediated signaling none Asparagus officinalis A4U43_C04F18800 R-AOF-9645950 A4U43_C04F18800 [nucleoplasm] R-AOF-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9645850 Activation of pre-replication complex none Asparagus officinalis A4U43_C04F18800 R-AOF-9645950 A4U43_C04F18800 [nucleoplasm] R-AOF-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675782 Maturation none Asparagus officinalis A4U43_C04F18800 R-AOF-9645950 A4U43_C04F18800 [nucleoplasm] R-AOF-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675815 Leading strand synthesis none Asparagus officinalis A4U43_C04F18800 R-AOF-9645950 A4U43_C04F18800 [nucleoplasm] R-AOF-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675824 DNA replication Initiation none Asparagus officinalis A4U43_C04F18800 R-AOF-9645950 A4U43_C04F18800 [nucleoplasm] R-AOF-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675885 Lagging strand synthesis none Asparagus officinalis A4U43_C04F19030 R-AOF-9675280 A4U43_C04F19030 [nucleoplasm] R-AOF-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9030680 Crown root development none Asparagus officinalis A4U43_C04F19770 R-AOF-1129136 A4U43_C04F19770 [plastid stroma] R-AOF-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Asparagus officinalis A4U43_C04F19800 R-AOF-9675297 A4U43_C04F19800 [mitochondrion] R-AOF-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9030654 Primary root development none Asparagus officinalis A4U43_C04F20320 R-AOF-5654756 A4U43_C04F20320 [cytosol] R-AOF-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119281 Aspartate biosynthesis I none Asparagus officinalis A4U43_C04F20320 R-AOF-1123648 A4U43_C04F20320 [plastid] R-AOF-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119506 tyrosine degradation I none Asparagus officinalis A4U43_C04F20320 R-AOF-5631992 A4U43_C04F20320 [plastid stroma] R-AOF-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119553 Asparagine biosynthesis none Asparagus officinalis A4U43_C04F20640 R-AOF-9675860 A4U43_C04F20640 [nucleoplasm] R-AOF-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675824 DNA replication Initiation none Asparagus officinalis A4U43_C04F20690 R-AOF-9681905 A4U43_C04F20690 [Golgi membrane] R-AOF-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119574 UDP-L-arabinose biosynthesis and transport none Asparagus officinalis A4U43_C04F20940 R-AOF-8987448 A4U43_C04F20940 [peroxisomal matrix] R-AOF-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119312 Photorespiration none Asparagus officinalis A4U43_C04F21160 R-AOF-8986767-2 A4U43_C04F21160 [plastid] R-AOF-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8986768 Anther and pollen development none Asparagus officinalis A4U43_C04F21170 R-AOF-8986767 A4U43_C04F21170 [plastid] R-AOF-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8986768 Anther and pollen development none Asparagus officinalis A4U43_C04F21600 R-AOF-9618171 A4U43_C04F21600 [plasma membrane] R-AOF-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9618218 Arsenic uptake and detoxification none Asparagus officinalis A4U43_C04F21850 R-AOF-1130136 A4U43_C04F21850 [mitochondrial matrix] R-AOF-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119533 TCA cycle (plant) none Asparagus officinalis A4U43_C04F21850 R-AOF-1130136 A4U43_C04F21850 [mitochondrial matrix] R-AOF-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119540 Leucine biosynthesis none Asparagus officinalis A4U43_C04F22250 R-AOF-1124757 A4U43_C04F22250 [cytosol] R-AOF-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119465 Sucrose biosynthesis none Asparagus officinalis A4U43_C04F22250 R-AOF-1124757 A4U43_C04F22250 [cytosol] R-AOF-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119477 Starch biosynthesis none Asparagus officinalis A4U43_C04F22640 R-AOF-1127292 A4U43_C04F22640 [plastid stroma] R-AOF-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Asparagus officinalis A4U43_C04F22700 R-AOF-9675845 A4U43_C04F22700 [nucleoplasm] R-AOF-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675782 Maturation none Asparagus officinalis A4U43_C04F2280 R-AOF-9675439 A4U43_C04F2280 [mitochondrial matrix] R-AOF-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9030654 Primary root development none Asparagus officinalis A4U43_C04F23410 R-AOF-8854445 A4U43_C04F23410 [cytosol] R-AOF-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119276 Choline biosynthesis III none Asparagus officinalis A4U43_C04F2360 R-AOF-1129569 A4U43_C04F2360 [cytosol] R-AOF-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119379 Flavin biosynthesis none Asparagus officinalis A4U43_C04F24050 R-AOF-5632232 phospho-A4U43_C04F24050 [plasma membrane] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C04F24240 R-AOF-9639892 A4U43_C04F24240 [cell wall] R-AOF-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9639861 Development of root hair none Asparagus officinalis A4U43_C04F24330 R-AOF-1129892 A4U43_C04F24330 [cytosol] R-AOF-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119334 Ethylene biosynthesis from methionine none Asparagus officinalis A4U43_C04F24330 R-AOF-1129892 A4U43_C04F24330 [cytosol] R-AOF-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119624 Methionine salvage pathway none Asparagus officinalis A4U43_C04F25870 R-AOF-1125261-2 A4U43_C04F25870 R-AOF-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119400 Methionine biosynthesis II none Asparagus officinalis A4U43_C04F26890 R-AOF-1126602-2 A4U43_C04F26890 [cytosol] R-AOF-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119273 Lysine biosynthesis I none Asparagus officinalis A4U43_C04F26890 R-AOF-1126602-2 A4U43_C04F26890 [cytosol] R-AOF-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119283 Lysine biosynthesis II none Asparagus officinalis A4U43_C04F26890 R-AOF-5606494-2 A4U43_C04F26890 [plastid stroma] R-AOF-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119419 Lysine biosynthesis VI none Asparagus officinalis A4U43_C04F26920 R-AOF-1124935 A4U43_C04F26920 [cytosol] R-AOF-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119349 S-methylmethionine cycle none Asparagus officinalis A4U43_C04F27410 R-AOF-9025739-2 A4U43_C04F27410 [plasma membrane] R-AOF-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9025727 Iron uptake and transport in root vascular system none Asparagus officinalis A4U43_C04F27410 R-AOF-9025739-2 A4U43_C04F27410 [plasma membrane] R-AOF-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9618218 Arsenic uptake and detoxification none Asparagus officinalis A4U43_C04F27410 R-AOF-9025739-2 A4U43_C04F27410 [plasma membrane] R-AOF-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9639136 Response to Aluminum stress none Asparagus officinalis A4U43_C04F27440 R-AOF-9675877 A4U43_C04F27440 [nucleoplasm] R-AOF-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675815 Leading strand synthesis none Asparagus officinalis A4U43_C04F28090 R-AOF-1125261 A4U43_C04F28090 R-AOF-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119400 Methionine biosynthesis II none Asparagus officinalis A4U43_C04F2830 R-AOF-5655057-2 A4U43_C04F2830 [Golgi lumen] R-AOF-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5655101 Xyloglucan biosynthesis none Asparagus officinalis A4U43_C04F28700 R-AOF-1125610 A4U43_C04F28700 [cytosol] R-AOF-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119276 Choline biosynthesis III none Asparagus officinalis A4U43_C04F29450 R-AOF-1128328 A4U43_C04F29450 [cytosol] R-AOF-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119615 Mevalonate pathway none Asparagus officinalis A4U43_C04F31070 R-AOF-9675851 A4U43_C04F31070 [nucleoplasm] R-AOF-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675815 Leading strand synthesis none Asparagus officinalis A4U43_C04F3130 R-AOF-9826654 A4U43_C04F3130 [nucleoplasm] R-AOF-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Asparagus officinalis A4U43_C04F31330 R-AOF-9658589 A4U43_C04F31330 [endoplasmic reticulum lumen] R-AOF-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119502 Allantoin degradation none Asparagus officinalis A4U43_C04F31960 R-AOF-1126053 A4U43_C04F31960 [mitochondrial matrix] R-AOF-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119479 Valine degradation none Asparagus officinalis A4U43_C04F320 R-AOF-5608161 A4U43_C04F320 [nucleoplasm] R-AOF-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5608118 Auxin signalling none Asparagus officinalis A4U43_C04F32990 R-AOF-1128812 A4U43_C04F32990 [cytosol] R-AOF-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119393 Asparagine degradation I none Asparagus officinalis A4U43_C04F33170 R-AOF-8933766 A4U43_C04F33170 [nucleoplasm] R-AOF-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8933811 Circadian rhythm none Asparagus officinalis A4U43_C04F33220 R-AOF-9025430 A4U43_C04F33220 [endoplasmic reticulum membrane] R-AOF-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119325 Sphingolipid metabolism none Asparagus officinalis A4U43_C04F33500 R-AOF-5654756-2 A4U43_C04F33500 [cytosol] R-AOF-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119281 Aspartate biosynthesis I none Asparagus officinalis A4U43_C04F33500 R-AOF-1123648-2 A4U43_C04F33500 [plastid] R-AOF-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119506 tyrosine degradation I none Asparagus officinalis A4U43_C04F33500 R-AOF-5631992-2 A4U43_C04F33500 [plastid stroma] R-AOF-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119553 Asparagine biosynthesis none Asparagus officinalis A4U43_C04F33540 R-AOF-8879004 A4U43_C04F33540 [nucleoplasm] R-AOF-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8879007 Response to cold temperature none Asparagus officinalis A4U43_C04F33790 R-AOF-9658643-2 A4U43_C04F33790 [cytosol] R-AOF-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119567 Beta-alanine biosynthesis I none Asparagus officinalis A4U43_C04F33900 R-AOF-9025699 A4U43_C04F33900 [plasma membrane] R-AOF-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8858053 Polar auxin transport none Asparagus officinalis A4U43_C04F33900 R-AOF-9025699 A4U43_C04F33900 [plasma membrane] R-AOF-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9025727 Iron uptake and transport in root vascular system none Asparagus officinalis A4U43_C04F34110 R-AOF-9658643 A4U43_C04F34110 [cytosol] R-AOF-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119567 Beta-alanine biosynthesis I none Asparagus officinalis A4U43_C04F34250 R-AOF-1130394 A4U43_C04F34250 [cytosol] R-AOF-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119452 Galactose degradation II none Asparagus officinalis A4U43_C04F34280 R-AOF-1125587 A4U43_C04F34280 [cytosol] R-AOF-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119379 Flavin biosynthesis none Asparagus officinalis A4U43_C04F34480 R-AOF-9025541 A4U43_C04F34480 [endoplasmic reticulum membrane] R-AOF-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119325 Sphingolipid metabolism none Asparagus officinalis A4U43_C04F34860 R-AOF-8868990 A4U43_C04F34860 [endoplasmic reticulum membrane] R-AOF-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8868949 Intracellular auxin transport none Asparagus officinalis A4U43_C04F34940 R-AOF-9675481 A4U43_C04F34940 [cytosol] R-AOF-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9030654 Primary root development none Asparagus officinalis A4U43_C04F35550 R-AOF-1122855 A4U43_C04F35550 [cytosol] R-AOF-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119360 Fructan biosynthesis none Asparagus officinalis A4U43_C04F35560 R-AOF-1128054-2 A4U43_C04F35560 [mitochondrial matrix] R-AOF-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119479 Valine degradation none Asparagus officinalis A4U43_C04F35570 R-AOF-1123575 A4U43_C04F35570 [cytosol] R-AOF-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119297 Beta-alanine biosynthesis III none Asparagus officinalis A4U43_C04F35590 R-AOF-1125569-2 A4U43_C04F35590 [cytosol] R-AOF-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119516 Trehalose biosynthesis I none Asparagus officinalis A4U43_C04F4110 R-AOF-9675876 A4U43_C04F4110 [nucleoplasm] R-AOF-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675782 Maturation none Asparagus officinalis A4U43_C04F4110 R-AOF-9675876 A4U43_C04F4110 [nucleoplasm] R-AOF-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675815 Leading strand synthesis none Asparagus officinalis A4U43_C04F4110 R-AOF-9675876 A4U43_C04F4110 [nucleoplasm] R-AOF-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675885 Lagging strand synthesis none Asparagus officinalis A4U43_C04F4320 R-AOF-1124861-2 A4U43_C04F4320 [plastid stroma] R-AOF-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119449 Carotenoid biosynthesis none Asparagus officinalis A4U43_C04F50 R-AOF-1126794 A4U43_C04F50 [cytosol] R-AOF-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119331 Cysteine biosynthesis I none Asparagus officinalis A4U43_C04F5090 R-AOF-1126728 A4U43_C04F5090 [plastid stroma] R-AOF-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119424 Plastid glycolysis none Asparagus officinalis A4U43_C04F5120 R-AOF-1122785-4 A4U43_C04F5120 [cytosol] R-AOF-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119273 Lysine biosynthesis I none Asparagus officinalis A4U43_C04F5120 R-AOF-1126726-3 A4U43_C04F5120 [cytosol] R-AOF-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119273 Lysine biosynthesis I none Asparagus officinalis A4U43_C04F5120 R-AOF-1122785-4 A4U43_C04F5120 [cytosol] R-AOF-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119283 Lysine biosynthesis II none Asparagus officinalis A4U43_C04F5120 R-AOF-1126726-3 A4U43_C04F5120 [cytosol] R-AOF-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119283 Lysine biosynthesis II none Asparagus officinalis A4U43_C04F5120 R-AOF-1122785-4 A4U43_C04F5120 [cytosol] R-AOF-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119570 Cytosolic glycolysis none Asparagus officinalis A4U43_C04F5410 R-AOF-9828974 CKX3 [endoplasmic reticulum lumen] R-AOF-9828944 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9828944 Regulation of lemma joint development and leaf angle by cytokinin none Asparagus officinalis A4U43_C04F5740 R-AOF-5632129-2 A4U43_C04F5740 [nucleoplasm] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C04F5920 R-AOF-5149646 A4U43_C04F5920 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C04F5920 R-AOF-1126652 A4U43_C04F5920 [cytosol] R-AOF-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119570 Cytosolic glycolysis none Asparagus officinalis A4U43_C04F6130 R-AOF-1126091 A4U43_C04F6130 [cytosol] R-AOF-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119394 Pantothenate and coenzyme A biosynthesis III none Asparagus officinalis A4U43_C04F6130 R-AOF-1126091 A4U43_C04F6130 [cytosol] R-AOF-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119496 Pantothenate biosynthesis I none Asparagus officinalis A4U43_C04F6130 R-AOF-1126091 A4U43_C04F6130 [cytosol] R-AOF-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119544 Pantothenate biosynthesis II none Asparagus officinalis A4U43_C04F6130 R-AOF-1126091 A4U43_C04F6130 [cytosol] R-AOF-1119568 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119568 Pantothenate biosynthesis III none Asparagus officinalis A4U43_C04F6480 R-AOF-1126436 A4U43_C04F6480 [cytosol] R-AOF-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119615 Mevalonate pathway none Asparagus officinalis A4U43_C04F710 R-AOF-1130235 A4U43_C04F710 [cytosol] R-AOF-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119261 Salicylate biosynthesis none Asparagus officinalis A4U43_C04F710 R-AOF-1130235 A4U43_C04F710 [cytosol] R-AOF-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119418 Suberin biosynthesis none Asparagus officinalis A4U43_C04F710 R-AOF-1130235 A4U43_C04F710 [cytosol] R-AOF-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119582 Phenylpropanoid biosynthesis, initial reactions none Asparagus officinalis A4U43_C04F7240 R-AOF-9640739 A4U43_C04F7240 [nucleoplasm] R-AOF-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640887 G1/S transition none Asparagus officinalis A4U43_C04F7380 R-AOF-1124453 A4U43_C04F7380 [peroxisomal matrix] R-AOF-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119407 Ureide biosynthesis none Asparagus officinalis A4U43_C04F7870 R-AOF-5146758 A4U43_C04F7870 [mitochondrial matrix] R-AOF-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119533 TCA cycle (plant) none Asparagus officinalis A4U43_C04F7930 R-AOF-2685732 A4U43_C04F7930 [cytosol] R-AOF-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119580 IAA biosynthesis II none Asparagus officinalis A4U43_C04F8130 R-AOF-1129184 A4U43_C04F8130 [cytosol] R-AOF-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119273 Lysine biosynthesis I none Asparagus officinalis A4U43_C04F8130 R-AOF-1129184 A4U43_C04F8130 [cytosol] R-AOF-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119283 Lysine biosynthesis II none Asparagus officinalis A4U43_C04F8130 R-AOF-5606505 A4U43_C04F8130 [plastid stroma] R-AOF-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119419 Lysine biosynthesis VI none Asparagus officinalis A4U43_C04F930 R-AOF-1130235-3 A4U43_C04F930 [cytosol] R-AOF-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119261 Salicylate biosynthesis none Asparagus officinalis A4U43_C04F930 R-AOF-1130235-3 A4U43_C04F930 [cytosol] R-AOF-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119418 Suberin biosynthesis none Asparagus officinalis A4U43_C04F930 R-AOF-1130235-3 A4U43_C04F930 [cytosol] R-AOF-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119582 Phenylpropanoid biosynthesis, initial reactions none Asparagus officinalis A4U43_C04F9590 R-AOF-1126615-2 A4U43_C04F9590 [cytosol] R-AOF-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119437 Glutathione redox reactions I none Asparagus officinalis A4U43_C04F9780 R-AOF-5149678 A4U43_C04F9780 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C05F10120 R-AOF-9639010 A4U43_C05F10120 [cytosol] R-AOF-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119434 Phytic acid biosynthesis (lipid-independent) none Asparagus officinalis A4U43_C05F11490 R-AOF-1125926 A4U43_C05F11490 [cytosol] R-AOF-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119273 Lysine biosynthesis I none Asparagus officinalis A4U43_C05F11490 R-AOF-1125926 A4U43_C05F11490 [cytosol] R-AOF-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119283 Lysine biosynthesis II none Asparagus officinalis A4U43_C05F11490 R-AOF-1125926 A4U43_C05F11490 [cytosol] R-AOF-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119295 Homoserine biosynthesis none Asparagus officinalis A4U43_C05F11490 R-AOF-5606498 A4U43_C05F11490 [plastid stroma] R-AOF-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119419 Lysine biosynthesis VI none Asparagus officinalis A4U43_C05F12340 R-AOF-2960790 A4U43_C05F12340 [cytosol] R-AOF-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119386 UDP-N-acetylgalactosamine biosynthesis none Asparagus officinalis A4U43_C05F12340 R-AOF-2960790 A4U43_C05F12340 [cytosol] R-AOF-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9030654 Primary root development none Asparagus officinalis A4U43_C05F1320 R-AOF-5632301 A4U43_C05F1320 [nucleoplasm] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C05F1320 R-AOF-5632301 A4U43_C05F1320 [nucleoplasm] R-AOF-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-6787011 Jasmonic acid signaling none Asparagus officinalis A4U43_C05F13980 R-AOF-1123161-2 A4U43_C05F13980 [chloroplast] R-AOF-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119494 Tryptophan biosynthesis none Asparagus officinalis A4U43_C05F14110 R-AOF-1124959 A4U43_C05F14110 [cytosol] R-AOF-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119623 Acyl-CoA synthetase pathway none Asparagus officinalis A4U43_C05F14480 R-AOF-1124037 A4U43_C05F14480 [mitochondrial matrix] R-AOF-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119289 Arginine degradation none Asparagus officinalis A4U43_C05F14750 R-AOF-8868866 A4U43_C05F14750 [endoplasmic reticulum membrane] R-AOF-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8868949 Intracellular auxin transport none Asparagus officinalis A4U43_C05F14890 R-AOF-1124598-2 A4U43_C05F14890 [cytosol] R-AOF-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119300 Glycolipid desaturation none Asparagus officinalis A4U43_C05F14910 R-AOF-1124598 A4U43_C05F14910 [cytosol] R-AOF-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119300 Glycolipid desaturation none Asparagus officinalis A4U43_C05F15160 R-AOF-1130152 A4U43_C05F15160 [cytosol] R-AOF-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119394 Pantothenate and coenzyme A biosynthesis III none Asparagus officinalis A4U43_C05F15430 R-AOF-1124496-2 A4U43_C05F15430 [cytosol] R-AOF-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119615 Mevalonate pathway none Asparagus officinalis A4U43_C05F15890 R-AOF-1130036 A4U43_C05F15890 [endoplasmic reticulum membrane] R-AOF-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119402 Phospholipid biosynthesis I none Asparagus officinalis A4U43_C05F16130 R-AOF-1124613 A4U43_C05F16130 [plasma membrane] R-AOF-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119314 Cellulose biosynthesis none Asparagus officinalis A4U43_C05F16570 R-AOF-1126604 A4U43_C05F16570 [cytosol] R-AOF-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119438 Secologanin and strictosidine biosynthesis none Asparagus officinalis A4U43_C05F16650 R-AOF-9675803 A4U43_C05F16650 [nucleoplasm] R-AOF-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675815 Leading strand synthesis none Asparagus officinalis A4U43_C05F17520 R-AOF-1128200 A4U43_C05F17520 [cytosol] R-AOF-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119316 Phenylpropanoid biosynthesis none Asparagus officinalis A4U43_C05F17560 R-AOF-1124231 A4U43_C05F17560 [cytosol] R-AOF-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119389 Phenylalanine biosynthesis I none Asparagus officinalis A4U43_C05F17760 R-AOF-1124334 A4U43_C05F17760 [plasma membrane] R-AOF-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119314 Cellulose biosynthesis none Asparagus officinalis A4U43_C05F18240 R-AOF-1129926 A4U43_C05F18240 [cytosol] R-AOF-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Asparagus officinalis A4U43_C05F18330 R-AOF-1127625 A4U43_C05F18330 [cytosol] R-AOF-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119265 Tetrahydrofolate biosynthesis I none Asparagus officinalis A4U43_C05F18330 R-AOF-1127625 A4U43_C05F18330 [cytosol] R-AOF-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119523 Tetrahydrofolate biosynthesis II none Asparagus officinalis A4U43_C05F18350 R-AOF-9675391-2 A4U43_C05F18350 [nucleoplasm] R-AOF-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675508 Root elongation none Asparagus officinalis A4U43_C05F18680 R-AOF-1127382-2 A4U43_C05F18680 [cytosol] R-AOF-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119460 Isoleucine biosynthesis from threonine none Asparagus officinalis A4U43_C05F18680 R-AOF-1127382-2 A4U43_C05F18680 [cytosol] R-AOF-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119600 Valine biosynthesis none Asparagus officinalis A4U43_C05F18740 R-AOF-1125734-2 A4U43_C05F18740 [cytosol] R-AOF-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119281 Aspartate biosynthesis I none Asparagus officinalis A4U43_C05F18740 R-AOF-5632000-2 A4U43_C05F18740 [plastid stroma] R-AOF-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119553 Asparagine biosynthesis none Asparagus officinalis A4U43_C05F18980 R-AOF-1128214 A4U43_C05F18980 [nucleoplasm] R-AOF-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5608118 Auxin signalling none Asparagus officinalis A4U43_C05F19010 R-AOF-5654957-2 A4U43_C05F19010 [Golgi lumen] R-AOF-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5654909 Xylan biosynthesis none Asparagus officinalis A4U43_C05F1910 R-AOF-9025712-2 A4U43_C05F1910 [cytosol] R-AOF-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9025754 Mugineic acid biosynthesis none Asparagus officinalis A4U43_C05F19190 R-AOF-9611557 RAC1 [plasma membrane] R-AOF-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9611432 Recognition of fungal and bacterial pathogens and immunity response none Asparagus officinalis A4U43_C05F20530 R-AOF-2685730-2 A4U43_C05F20530 [cytosol] R-AOF-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119580 IAA biosynthesis II none Asparagus officinalis A4U43_C05F20820 R-AOF-9675365 A4U43_C05F20820 [nucleoplasm] R-AOF-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675508 Root elongation none Asparagus officinalis A4U43_C05F21030 R-AOF-9640783 A4U43_C05F21030 [nucleoplasm] R-AOF-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640760 G1 phase none Asparagus officinalis A4U43_C05F22030 R-AOF-1127065 A4U43_C05F22030 [cytosol] R-AOF-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119304 Putrescine biosynthesis II none Asparagus officinalis A4U43_C05F22930 R-AOF-2685730 A4U43_C05F22930 [cytosol] R-AOF-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119580 IAA biosynthesis II none Asparagus officinalis A4U43_C05F23080 R-AOF-1128334 A4U43_C05F23080 [mitochondrial matrix] R-AOF-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119337 Proline degradation none Asparagus officinalis A4U43_C05F23280 R-AOF-1125237 A4U43_C05F23280 [mitochondrial matrix] R-AOF-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119533 TCA cycle (plant) none Asparagus officinalis A4U43_C05F23310 R-AOF-5632241-2 A4U43_C05F23310 [nucleoplasm] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C05F23830 R-AOF-1123867 A4U43_C05F23830 [cytosol] R-AOF-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119370 Sterol biosynthesis none Asparagus officinalis A4U43_C05F23940 R-AOF-1126034 A4U43_C05F23940 [cytosol] R-AOF-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119534 Pyridoxal 5'-phosphate salvage pathway none Asparagus officinalis A4U43_C05F23940 R-AOF-1126034 A4U43_C05F23940 [cytosol] R-AOF-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119594 Pyridoxal 5'-phosphate biosynthesis none Asparagus officinalis A4U43_C05F24620 R-AOF-8987460 A4U43_C05F24620 [chloroplast] R-AOF-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119312 Photorespiration none Asparagus officinalis A4U43_C05F25470 R-AOF-1123210 A4U43_C05F25470 [cytosol] R-AOF-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119516 Trehalose biosynthesis I none Asparagus officinalis A4U43_C05F26870 R-AOF-1125997 A4U43_C05F26870 [nucleoplasm] R-AOF-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5608118 Auxin signalling none Asparagus officinalis A4U43_C05F26870 R-AOF-1125997 A4U43_C05F26870 [nucleoplasm] R-AOF-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9030680 Crown root development none Asparagus officinalis A4U43_C05F27540 R-AOF-9640761 A4U43_C05F27540 [nucleoplasm] R-AOF-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640882 Assembly of pre-replication complex none Asparagus officinalis A4U43_C05F27540 R-AOF-9640761 A4U43_C05F27540 [nucleoplasm] R-AOF-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9645850 Activation of pre-replication complex none Asparagus officinalis A4U43_C05F27540 R-AOF-9640761 A4U43_C05F27540 [nucleoplasm] R-AOF-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675824 DNA replication Initiation none Asparagus officinalis A4U43_C05F27630 R-AOF-1126157 A4U43_C05F27630 [cytosol] R-AOF-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119460 Isoleucine biosynthesis from threonine none Asparagus officinalis A4U43_C05F27630 R-AOF-1126157 A4U43_C05F27630 [cytosol] R-AOF-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119600 Valine biosynthesis none Asparagus officinalis A4U43_C05F27880 R-AOF-8854127 A4U43_C05F27880 [cytosol] R-AOF-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119556 Choline biosynthesis I none Asparagus officinalis A4U43_C05F2800 R-AOF-9916298 OsEXPA3 [extracellular region] R-AOF-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9916190 Root angle formation: elongation and curvature response none Asparagus officinalis A4U43_C05F28210 R-AOF-8934025-2 A4U43_C05F28210 [nucleoplasm] R-AOF-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8934036 Long day regulated expression of florigens none Asparagus officinalis A4U43_C05F28210 R-AOF-8934025-2 A4U43_C05F28210 [nucleoplasm] R-AOF-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8934108 Short day regulated expression of florigens none Asparagus officinalis A4U43_C05F28210 R-AOF-8934025-2 A4U43_C05F28210 [nucleoplasm] R-AOF-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8934257 Transition from vegetative to reproductive shoot apical meristem none Asparagus officinalis A4U43_C05F28210 R-AOF-9684733-2 A4U43_C05F28210 [cytosol] R-AOF-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8934257 Transition from vegetative to reproductive shoot apical meristem none Asparagus officinalis A4U43_C05F28210 R-AOF-9684733-2 A4U43_C05F28210 [cytosol] R-AOF-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9609102 Flower development none Asparagus officinalis A4U43_C05F28210 R-AOF-8934025-2 A4U43_C05F28210 [nucleoplasm] R-AOF-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9928946 Drought escape (DE) via ABA-independent pathway none Asparagus officinalis A4U43_C05F28210 R-AOF-8934025-2 A4U43_C05F28210 [nucleoplasm] R-AOF-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9928995 Drought escape (DE) via ABA-dependent pathway none Asparagus officinalis A4U43_C05F28330 R-AOF-1129859 A4U43_C05F28330 [chloroplast stroma] R-AOF-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119443 Ammonia assimilation cycle none Asparagus officinalis A4U43_C05F28330 R-AOF-5606382 A4U43_C05F28330 [plastid stroma] R-AOF-1119535 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119535 Glutamate biosynthesis IV none Asparagus officinalis A4U43_C05F28370 R-AOF-1123059-2 A4U43_C05F28370 [cytosol] R-AOF-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119317 Spermine biosynthesis none Asparagus officinalis A4U43_C05F28370 R-AOF-1123059-2 A4U43_C05F28370 [cytosol] R-AOF-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119343 Spermidine biosynthesis none Asparagus officinalis A4U43_C05F2840 R-AOF-1127913-2 A4U43_C05F2840 [cytosol] R-AOF-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119495 Citrulline biosynthesis none Asparagus officinalis A4U43_C05F2840 R-AOF-1127913-2 A4U43_C05F2840 [cytosol] R-AOF-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119631 Proline biosynthesis I none Asparagus officinalis A4U43_C05F28660 R-AOF-5679436 A4U43_C05F28660 [nucleoplasm] R-AOF-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5679411 Gibberellin signaling none Asparagus officinalis A4U43_C05F28810 R-AOF-9612372 A4U43_C05F28810 [mitochondrial matrix] R-AOF-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119612 Cysteine degradation none Asparagus officinalis A4U43_C05F2900 R-AOF-1130202 A4U43_C05F2900 [cytosol] R-AOF-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119410 Ascorbate biosynthesis none Asparagus officinalis A4U43_C05F29150 R-AOF-5632264 A4U43_C05F29150 [nucleoplasm] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C05F30270 R-AOF-1122881 A4U43_C05F30270 [cytosol] R-AOF-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Asparagus officinalis A4U43_C05F30270 R-AOF-1122881 A4U43_C05F30270 [cytosol] R-AOF-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119438 Secologanin and strictosidine biosynthesis none Asparagus officinalis A4U43_C05F30270 R-AOF-1122881 A4U43_C05F30270 [cytosol] R-AOF-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119486 IAA biosynthesis I none Asparagus officinalis A4U43_C05F30290 R-AOF-1122849-2 A4U43_C05F30290 [mitochondrion] R-AOF-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119506 tyrosine degradation I none Asparagus officinalis A4U43_C05F30300 R-AOF-1122849 A4U43_C05F30300 [mitochondrion] R-AOF-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119506 tyrosine degradation I none Asparagus officinalis A4U43_C05F30310 R-AOF-5632251 A4U43_C05F30310 [nucleoplasm] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C05F30370 R-AOF-9675426 A4U43_C05F30370 [nucleoplasm] R-AOF-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9030654 Primary root development none Asparagus officinalis A4U43_C05F31210 R-AOF-1124496 A4U43_C05F31210 [cytosol] R-AOF-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119615 Mevalonate pathway none Asparagus officinalis A4U43_C05F31470 R-AOF-1126400 A4U43_C05F31470 [chloroplast] R-AOF-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119494 Tryptophan biosynthesis none Asparagus officinalis A4U43_C05F31900 R-AOF-1122827 A4U43_C05F31900 [cytosol] R-AOF-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119334 Ethylene biosynthesis from methionine none Asparagus officinalis A4U43_C05F32250 R-AOF-1125967 A4U43_C05F32250 [cytosol] R-AOF-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119316 Phenylpropanoid biosynthesis none Asparagus officinalis A4U43_C05F32550 R-AOF-8986682 A4U43_C05F32550 [extracellular region] R-AOF-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8986768 Anther and pollen development none Asparagus officinalis A4U43_C05F32900 R-AOF-1127574 A4U43_C05F32900 [cytosol] R-AOF-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119465 Sucrose biosynthesis none Asparagus officinalis A4U43_C05F33790 R-AOF-1130344 A4U43_C05F33790 [cytosol] R-AOF-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119389 Phenylalanine biosynthesis I none Asparagus officinalis A4U43_C05F3380 R-AOF-9684723-3 A4U43_C05F3380 [cytosol] R-AOF-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9609102 Flower development none Asparagus officinalis A4U43_C05F3400 R-AOF-5149632 A4U43_C05F3400 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C05F34330 R-AOF-1125014 A4U43_C05F34330 [cytosol] R-AOF-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Asparagus officinalis A4U43_C05F34340 R-AOF-1122932 A4U43_C05F34340 [cytosol] R-AOF-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119317 Spermine biosynthesis none Asparagus officinalis A4U43_C05F34340 R-AOF-1122932 A4U43_C05F34340 [cytosol] R-AOF-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119343 Spermidine biosynthesis none Asparagus officinalis A4U43_C05F34340 R-AOF-1122932 A4U43_C05F34340 [cytosol] R-AOF-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119446 Lysine degradation I none Asparagus officinalis A4U43_C05F390 R-AOF-1125341 A4U43_C05F390 [cytosol] R-AOF-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119460 Isoleucine biosynthesis from threonine none Asparagus officinalis A4U43_C05F390 R-AOF-1125341 A4U43_C05F390 [cytosol] R-AOF-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119600 Valine biosynthesis none Asparagus officinalis A4U43_C05F4090 R-AOF-9681885 A4U43_C05F4090 [Golgi membrane] R-AOF-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119574 UDP-L-arabinose biosynthesis and transport none Asparagus officinalis A4U43_C05F4180 R-AOF-9675399 A4U43_C05F4180 [nucleoplasm] R-AOF-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9030654 Primary root development none Asparagus officinalis A4U43_C05F4370 R-AOF-1129818-2 A4U43_C05F4370 [mitochondrial matrix] R-AOF-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119365 Lysine degradation II none Asparagus officinalis A4U43_C05F4370 R-AOF-1173242-2 A4U43_C05F4370 [mitochondrial matrix] R-AOF-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119533 TCA cycle (plant) none Asparagus officinalis A4U43_C05F4480 R-AOF-1126883 A4U43_C05F4480 [cytosol] R-AOF-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119389 Phenylalanine biosynthesis I none Asparagus officinalis A4U43_C05F4510 R-AOF-1126883-2 A4U43_C05F4510 [cytosol] R-AOF-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119389 Phenylalanine biosynthesis I none Asparagus officinalis A4U43_C05F4940 R-AOF-9025294 A4U43_C05F4940 [cytosol] R-AOF-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119267 Phenylalanine degradation III none Asparagus officinalis A4U43_C05F4940 R-AOF-1124944 A4U43_C05F4940 [plastid stroma] R-AOF-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119460 Isoleucine biosynthesis from threonine none Asparagus officinalis A4U43_C05F4940 R-AOF-1127774 A4U43_C05F4940 [cytosol] R-AOF-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119460 Isoleucine biosynthesis from threonine none Asparagus officinalis A4U43_C05F4940 R-AOF-1124944 A4U43_C05F4940 [plastid stroma] R-AOF-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119486 IAA biosynthesis I none Asparagus officinalis A4U43_C05F4940 R-AOF-1127774 A4U43_C05F4940 [cytosol] R-AOF-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119486 IAA biosynthesis I none Asparagus officinalis A4U43_C05F4940 R-AOF-1124944 A4U43_C05F4940 [plastid stroma] R-AOF-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119502 Allantoin degradation none Asparagus officinalis A4U43_C05F4940 R-AOF-1124944 A4U43_C05F4940 [plastid stroma] R-AOF-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119600 Valine biosynthesis none Asparagus officinalis A4U43_C05F4940 R-AOF-1127774 A4U43_C05F4940 [cytosol] R-AOF-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119600 Valine biosynthesis none Asparagus officinalis A4U43_C05F510 R-AOF-4723690 A4U43_C05F510 [plastid stroma] R-AOF-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119464 Methylerythritol phosphate pathway none Asparagus officinalis A4U43_C05F5120 R-AOF-1124190 A4U43_C05F5120 [plastid stroma] R-AOF-1119412 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119412 Chlorophyll a biosynthesis I none Asparagus officinalis A4U43_C05F5140 R-AOF-5138505 A4U43_C05F5140 [plastid stroma] R-AOF-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119263 Arginine biosynthesis none Asparagus officinalis A4U43_C05F5140 R-AOF-5138505 A4U43_C05F5140 [plastid stroma] R-AOF-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119539 Ornithine biosynthesis none Asparagus officinalis A4U43_C05F5140 R-AOF-5138505 A4U43_C05F5140 [plastid stroma] R-AOF-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119622 Arginine biosynthesis II (acetyl cycle) none Asparagus officinalis A4U43_C05F5150 R-AOF-1124145 A4U43_C05F5150 [mitochondrial matrix] R-AOF-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119445 Beta-alanine biosynthesis II none Asparagus officinalis A4U43_C05F520 R-AOF-1129311 A4U43_C05F520 [cytosol] R-AOF-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Asparagus officinalis A4U43_C05F5400 R-AOF-9611863 A4U43_C05F5400 [mitochondrial matrix] R-AOF-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119479 Valine degradation none Asparagus officinalis A4U43_C05F5510 R-AOF-1129811 A4U43_C05F5510 [mitochondrion] R-AOF-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119403 Removal of superoxide radicals none Asparagus officinalis A4U43_C05F610 R-AOF-9611465-2 A4U43_C05F610 [nucleoplasm] R-AOF-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9611432 Recognition of fungal and bacterial pathogens and immunity response none Asparagus officinalis A4U43_C05F610 R-AOF-9611445-2 A4U43_C05F610 [nucleoplasm] R-AOF-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9611432 Recognition of fungal and bacterial pathogens and immunity response none Asparagus officinalis A4U43_C05F6200 R-AOF-1128534 A4U43_C05F6200 [cytosol] R-AOF-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119437 Glutathione redox reactions I none Asparagus officinalis A4U43_C05F7210 R-AOF-5632143 A4U43_C05F7210 [nucleoplasm] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C05F7210 R-AOF-5632143 A4U43_C05F7210 [nucleoplasm] R-AOF-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9924451 Shoot (tiller) formation and regulation of tiller angle none Asparagus officinalis A4U43_C05F7660 R-AOF-1130281 A4U43_C05F7660 [cytosol] R-AOF-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119574 UDP-L-arabinose biosynthesis and transport none Asparagus officinalis A4U43_C05F8070 R-AOF-1123482 A4U43_C05F8070 [plastid stroma] R-AOF-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119367 Polyisoprenoid biosynthesis none Asparagus officinalis A4U43_C05F850 R-AOF-1127928 A4U43_C05F850 [cytosol] R-AOF-1119595 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119595 Mannose degradation none Asparagus officinalis A4U43_C05F850 R-AOF-1127928 A4U43_C05F850 [cytosol] R-AOF-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119601 Trehalose degradation II none Asparagus officinalis A4U43_C05F850 R-AOF-1127928 A4U43_C05F850 [cytosol] R-AOF-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119628 GDP-mannose metabolism none Asparagus officinalis A4U43_C06F10 R-AOF-1122605 A4U43_C06F10 [cytosol] R-AOF-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119341 Galactosylcyclitol biosynthesis none Asparagus officinalis A4U43_C06F100 R-AOF-9618186 A4U43_C06F100 [plant-type vacuole membrane] R-AOF-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9618218 Arsenic uptake and detoxification none Asparagus officinalis A4U43_C06F1030 R-AOF-4827041 A4U43_C06F1030 [plastid stroma] R-AOF-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-4827054 Tetrapyrrole biosynthesis I none Asparagus officinalis A4U43_C06F10750 R-AOF-1127734 A4U43_C06F10750 [cytosol] R-AOF-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119506 tyrosine degradation I none Asparagus officinalis A4U43_C06F11180 R-AOF-1126531 A4U43_C06F11180 [cytosol] R-AOF-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119410 Ascorbate biosynthesis none Asparagus officinalis A4U43_C06F11180 R-AOF-1126531 A4U43_C06F11180 [cytosol] R-AOF-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119628 GDP-mannose metabolism none Asparagus officinalis A4U43_C06F11320 R-AOF-1122471 A4U43_C06F11320 [cytosol] R-AOF-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119276 Choline biosynthesis III none Asparagus officinalis A4U43_C06F12200 R-AOF-1122541 A4U43_C06F12200 [cytosol] R-AOF-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Asparagus officinalis A4U43_C06F12200 R-AOF-1122541 A4U43_C06F12200 [cytosol] R-AOF-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Asparagus officinalis A4U43_C06F1240 R-AOF-1125920 A4U43_C06F1240 [cytosol] R-AOF-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119273 Lysine biosynthesis I none Asparagus officinalis A4U43_C06F1240 R-AOF-1125920 A4U43_C06F1240 [cytosol] R-AOF-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119283 Lysine biosynthesis II none Asparagus officinalis A4U43_C06F12690 R-AOF-1127382 A4U43_C06F12690 [cytosol] R-AOF-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119460 Isoleucine biosynthesis from threonine none Asparagus officinalis A4U43_C06F12690 R-AOF-1127382 A4U43_C06F12690 [cytosol] R-AOF-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119600 Valine biosynthesis none Asparagus officinalis A4U43_C06F1340 R-AOF-1125187 A4U43_C06F1340 [cytosol] R-AOF-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119276 Choline biosynthesis III none Asparagus officinalis A4U43_C06F14500 R-AOF-1128637 A4U43_C06F14500 [chloroplast] R-AOF-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119494 Tryptophan biosynthesis none Asparagus officinalis A4U43_C06F1470 R-AOF-1129846 A4U43_C06F1470 [mitochondrion] R-AOF-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119337 Proline degradation none Asparagus officinalis A4U43_C06F1470 R-AOF-1129846 A4U43_C06F1470 [mitochondrion] R-AOF-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119458 Glutamate degradation none Asparagus officinalis A4U43_C06F1560 R-AOF-3230566 A4U43_C06F1560 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C06F16190 R-AOF-9626449-2 A4U43_C06F16190 [cytosol] R-AOF-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9626305 Regulatory network of nutrient accumulation none Asparagus officinalis A4U43_C06F1660 R-AOF-8987488 A4U43_C06F1660 [mitochondrial matrix] R-AOF-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119312 Photorespiration none Asparagus officinalis A4U43_C06F1700 R-AOF-1127243 A4U43_C06F1700 [amyloplast] R-AOF-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119477 Starch biosynthesis none Asparagus officinalis A4U43_C06F17160 R-AOF-1128804 A4U43_C06F17160 [cytosol] R-AOF-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119516 Trehalose biosynthesis I none Asparagus officinalis A4U43_C06F17670 R-AOF-1122836 A4U43_C06F17670 [cytosol] R-AOF-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119586 Cyanate degradation none Asparagus officinalis A4U43_C06F18040 R-AOF-4754219 A4U43_C06F18040 [plastid stroma] R-AOF-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119449 Carotenoid biosynthesis none Asparagus officinalis A4U43_C06F18420 R-AOF-1124037-2 A4U43_C06F18420 [mitochondrial matrix] R-AOF-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119289 Arginine degradation none Asparagus officinalis A4U43_C06F18540 R-AOF-5632111 A4U43_C06F18540 [cytosol] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C06F18540 R-AOF-5632216 phospho-A4U43_C06F18540 [cytosol] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C06F18540 R-AOF-5632145 phospho-A4U43_C06F18540 [nucleoplasm] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C06F18790 R-AOF-8987473-2 A4U43_C06F18790 [peroxisomal matrix] R-AOF-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119312 Photorespiration none Asparagus officinalis A4U43_C06F18790 R-AOF-1124984-2 A4U43_C06F18790 [cytosol] R-AOF-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119596 Glutamate biosynthesis I none Asparagus officinalis A4U43_C06F18850 R-AOF-5631953 A4U43_C06F18850 [mitochondrial matrix] R-AOF-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119289 Arginine degradation none Asparagus officinalis A4U43_C06F18850 R-AOF-1124214 A4U43_C06F18850 [cytosol] R-AOF-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119318 Proline biosynthesis V (from arginine) none Asparagus officinalis A4U43_C06F18850 R-AOF-1124214 A4U43_C06F18850 [cytosol] R-AOF-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119610 Biotin biosynthesis II none Asparagus officinalis A4U43_C06F2310 R-AOF-1125494 A4U43_C06F2310 [endoplasmic reticulum membrane] R-AOF-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119402 Phospholipid biosynthesis I none Asparagus officinalis A4U43_C06F2860 R-AOF-5138489-2 A4U43_C06F2860 [plastid stroma] R-AOF-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119263 Arginine biosynthesis none Asparagus officinalis A4U43_C06F2860 R-AOF-1127893-2 A4U43_C06F2860 [cytosol] R-AOF-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119444 Canavanine biosynthesis none Asparagus officinalis A4U43_C06F2860 R-AOF-5138489-2 A4U43_C06F2860 [plastid stroma] R-AOF-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119622 Arginine biosynthesis II (acetyl cycle) none Asparagus officinalis A4U43_C06F2860 R-AOF-5138489-2 A4U43_C06F2860 [plastid stroma] R-AOF-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5633340 Citrulline-nitric oxide cycle none Asparagus officinalis A4U43_C06F3120 R-AOF-1129585 A4U43_C06F3120 [cytosol] R-AOF-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119265 Tetrahydrofolate biosynthesis I none Asparagus officinalis A4U43_C06F3120 R-AOF-1129585 A4U43_C06F3120 [cytosol] R-AOF-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119523 Tetrahydrofolate biosynthesis II none Asparagus officinalis A4U43_C06F3180 R-AOF-1129571 A4U43_C06F3180 [mitochondrion] R-AOF-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119365 Lysine degradation II none Asparagus officinalis A4U43_C06F3690 R-AOF-9607102 A4U43_C06F3690 [mitochondrion] R-AOF-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9607185 Generation of superoxide radicals none Asparagus officinalis A4U43_C06F3760 R-AOF-5608125 A4U43_C06F3760 [nucleoplasm] R-AOF-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5608118 Auxin signalling none Asparagus officinalis A4U43_C06F3960 R-AOF-1124813 A4U43_C06F3960 [mitochondrial matrix] R-AOF-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119337 Proline degradation none Asparagus officinalis A4U43_C06F3960 R-AOF-8986570 A4U43_C06F3960 [mitochondrial matrix] R-AOF-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119365 Lysine degradation II none Asparagus officinalis A4U43_C06F3960 R-AOF-9658682 A4U43_C06F3960 [cytosol] R-AOF-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119567 Beta-alanine biosynthesis I none Asparagus officinalis A4U43_C06F410 R-AOF-1127743 A4U43_C06F410 [cytosol] R-AOF-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119428 GDP-D-rhamnose biosynthesis none Asparagus officinalis A4U43_C06F410 R-AOF-9681930 A4U43_C06F410 [Golgi membrane] R-AOF-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119574 UDP-L-arabinose biosynthesis and transport none Asparagus officinalis A4U43_C06F410 R-AOF-1127743 A4U43_C06F410 [cytosol] R-AOF-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Asparagus officinalis A4U43_C06F460 R-AOF-1130348 A4U43_C06F460 [cytosol] R-AOF-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Asparagus officinalis A4U43_C06F4730 R-AOF-9675818 A4U43_C06F4730 [nucleoplasm] R-AOF-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675815 Leading strand synthesis none Asparagus officinalis A4U43_C06F4860 R-AOF-1126542 A4U43_C06F4860 [cytosol] R-AOF-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119523 Tetrahydrofolate biosynthesis II none Asparagus officinalis A4U43_C06F4860 R-AOF-1126542 A4U43_C06F4860 [cytosol] R-AOF-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119617 Folate polyglutamylation I none Asparagus officinalis A4U43_C06F4890 R-AOF-1122843 A4U43_C06F4890 [cytosol] R-AOF-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119458 Glutamate degradation none Asparagus officinalis A4U43_C06F4900 R-AOF-9645866 A4U43_C06F4900 [nucleoplasm] R-AOF-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9645850 Activation of pre-replication complex none Asparagus officinalis A4U43_C06F4900 R-AOF-9645866 A4U43_C06F4900 [nucleoplasm] R-AOF-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675824 DNA replication Initiation none Asparagus officinalis A4U43_C06F4910 R-AOF-5632316 A4U43_C06F4910 [cytosol] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C06F5120 R-AOF-5149644 A4U43_C06F5120 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C06F5490 R-AOF-1128632 A4U43_C06F5490 [cytosol] R-AOF-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119465 Sucrose biosynthesis none Asparagus officinalis A4U43_C06F5490 R-AOF-1128632 A4U43_C06F5490 [cytosol] R-AOF-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119477 Starch biosynthesis none Asparagus officinalis A4U43_C06F5730 R-AOF-1127753 A4U43_C06F5730 [cytosol] R-AOF-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119278 PRPP biosynthesis I none Asparagus officinalis A4U43_C06F5820 R-AOF-9639957 A4U43_C06F5820 [plasma membrane] R-AOF-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9639861 Development of root hair none Asparagus officinalis A4U43_C06F6170 R-AOF-1125340-2 A4U43_C06F6170 [plastid stroma] R-AOF-1119274 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119274 Monoterpene biosynthesis none Asparagus officinalis A4U43_C06F6170 R-AOF-1125340-2 A4U43_C06F6170 [plastid stroma] R-AOF-1119593 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119593 Oleoresin monoterpene volatiles biosynthesis none Asparagus officinalis A4U43_C06F6300 R-AOF-1127502 A4U43_C06F6300 [cytosol] R-AOF-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119394 Pantothenate and coenzyme A biosynthesis III none Asparagus officinalis A4U43_C06F6450 R-AOF-1123717-2 A4U43_C06F6450 [cytosol] R-AOF-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119395 Maackiain biosynthesis none Asparagus officinalis A4U43_C06F6450 R-AOF-1123717-2 A4U43_C06F6450 [cytosol] R-AOF-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119453 Medicarpin biosynthesis none Asparagus officinalis A4U43_C06F6670 R-AOF-5149676-2 A4U43_C06F6670 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C06F6850 R-AOF-8868990-2 A4U43_C06F6850 [endoplasmic reticulum membrane] R-AOF-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8868949 Intracellular auxin transport none Asparagus officinalis A4U43_C06F7810 R-AOF-1128980 A4U43_C06F7810 [cytosol] R-AOF-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119586 Cyanate degradation none Asparagus officinalis A4U43_C06F8030 R-AOF-8854108 A4U43_C06F8030 [cytosol] R-AOF-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119556 Choline biosynthesis I none Asparagus officinalis A4U43_C06F8310 R-AOF-5632120-2 A4U43_C06F8310 [nucleoplasm] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C06F9280 R-AOF-1129355 A4U43_C06F9280 [plastid] R-AOF-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119403 Removal of superoxide radicals none Asparagus officinalis A4U43_C07F10000 R-AOF-1124956 A4U43_C07F10000 [cytosol] R-AOF-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119276 Choline biosynthesis III none Asparagus officinalis A4U43_C07F10360 R-AOF-1129161 A4U43_C07F10360 [amyloplast] R-AOF-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119477 Starch biosynthesis none Asparagus officinalis A4U43_C07F10410 R-AOF-9916298-2 OsEXPA3 [extracellular region] R-AOF-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9916190 Root angle formation: elongation and curvature response none Asparagus officinalis A4U43_C07F10580 R-AOF-9826674 A4U43_C07F10580 [nucleoplasm] R-AOF-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Asparagus officinalis A4U43_C07F10690 R-AOF-1122851 A4U43_C07F10690 [nucleoplasm] R-AOF-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5608118 Auxin signalling none Asparagus officinalis A4U43_C07F11370 R-AOF-9612399 A4U43_C07F11370 [peroxisomal matrix] R-AOF-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119612 Cysteine degradation none Asparagus officinalis A4U43_C07F11370 R-AOF-9612380 A4U43_C07F11370 [cytosol] R-AOF-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119612 Cysteine degradation none Asparagus officinalis A4U43_C07F11480 R-AOF-8986605-2 A4U43_C07F11480 [mitochondrial matrix] R-AOF-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119312 Photorespiration none Asparagus officinalis A4U43_C07F11480 R-AOF-1124620-2 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-AOF-1119351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119351 Mitochondrial pyruvate metabolism none Asparagus officinalis A4U43_C07F11480 R-AOF-1124620-2 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-AOF-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119533 TCA cycle (plant) none Asparagus officinalis A4U43_C07F12110 R-AOF-1125093 A4U43_C07F12110 [cytosol] R-AOF-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119456 Brassinosteroid biosynthesis II none Asparagus officinalis A4U43_C07F12630 R-AOF-8933856 A4U43_C07F12630 [nucleoplasm] R-AOF-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8933811 Circadian rhythm none Asparagus officinalis A4U43_C07F12630 R-AOF-8933748 A4U43_C07F12630 [cytosol] R-AOF-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8933811 Circadian rhythm none Asparagus officinalis A4U43_C07F12630 R-AOF-8933856 A4U43_C07F12630 [nucleoplasm] R-AOF-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8934036 Long day regulated expression of florigens none Asparagus officinalis A4U43_C07F12630 R-AOF-8933856 A4U43_C07F12630 [nucleoplasm] R-AOF-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9928995 Drought escape (DE) via ABA-dependent pathway none Asparagus officinalis A4U43_C07F1280 R-AOF-1127913 A4U43_C07F1280 [cytosol] R-AOF-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119495 Citrulline biosynthesis none Asparagus officinalis A4U43_C07F1280 R-AOF-1127913 A4U43_C07F1280 [cytosol] R-AOF-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119631 Proline biosynthesis I none Asparagus officinalis A4U43_C07F1300 R-AOF-1127539 A4U43_C07F1300 [cytosol] R-AOF-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Asparagus officinalis A4U43_C07F1300 R-AOF-1127539 A4U43_C07F1300 [cytosol] R-AOF-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119439 Cholesterol biosynthesis III (via desmosterol) none Asparagus officinalis A4U43_C07F1300 R-AOF-1127539 A4U43_C07F1300 [cytosol] R-AOF-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119559 Cholesterol biosynthesis I none Asparagus officinalis A4U43_C07F13860 R-AOF-4723654 A4U43_C07F13860 [plastid stroma] R-AOF-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119464 Methylerythritol phosphate pathway none Asparagus officinalis A4U43_C07F13860 R-AOF-1130030 A4U43_C07F13860 [cytosol] R-AOF-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119594 Pyridoxal 5'-phosphate biosynthesis none Asparagus officinalis A4U43_C07F13860 R-AOF-1130030 A4U43_C07F13860 [cytosol] R-AOF-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119629 Thiamine biosynthesis none Asparagus officinalis A4U43_C07F14170 R-AOF-1126115 A4U43_C07F14170 [cytosol] R-AOF-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119452 Galactose degradation II none Asparagus officinalis A4U43_C07F14170 R-AOF-1126115 A4U43_C07F14170 [cytosol] R-AOF-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119465 Sucrose biosynthesis none Asparagus officinalis A4U43_C07F14520 R-AOF-9639810 A4U43_C07F14520 [cell wall] R-AOF-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9639861 Development of root hair none Asparagus officinalis A4U43_C07F14550 R-AOF-1126830 A4U43_C07F14550 [mitochondrial matrix] R-AOF-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119533 TCA cycle (plant) none Asparagus officinalis A4U43_C07F15280 R-AOF-1123477-2 A4U43_C07F15280 [cytosol] R-AOF-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119451 Xylose degradation none Asparagus officinalis A4U43_C07F15700 R-AOF-1127928-2 A4U43_C07F15700 [cytosol] R-AOF-1119595 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119595 Mannose degradation none Asparagus officinalis A4U43_C07F15700 R-AOF-1127928-2 A4U43_C07F15700 [cytosol] R-AOF-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119601 Trehalose degradation II none Asparagus officinalis A4U43_C07F15700 R-AOF-1127928-2 A4U43_C07F15700 [cytosol] R-AOF-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119628 GDP-mannose metabolism none Asparagus officinalis A4U43_C07F15880 R-AOF-5631958 A4U43_C07F15880 [cytosol] R-AOF-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119289 Arginine degradation none Asparagus officinalis A4U43_C07F15880 R-AOF-1122345 A4U43_C07F15880 [cytosol] R-AOF-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119318 Proline biosynthesis V (from arginine) none Asparagus officinalis A4U43_C07F15880 R-AOF-1122345 A4U43_C07F15880 [cytosol] R-AOF-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119631 Proline biosynthesis I none Asparagus officinalis A4U43_C07F16560 R-AOF-9611465 A4U43_C07F16560 [nucleoplasm] R-AOF-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9611432 Recognition of fungal and bacterial pathogens and immunity response none Asparagus officinalis A4U43_C07F16560 R-AOF-9611445 A4U43_C07F16560 [nucleoplasm] R-AOF-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9611432 Recognition of fungal and bacterial pathogens and immunity response none Asparagus officinalis A4U43_C07F16660 R-AOF-1123477 A4U43_C07F16660 [cytosol] R-AOF-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119451 Xylose degradation none Asparagus officinalis A4U43_C07F16770 R-AOF-5603891 A4U43_C07F16770 [plastid stroma] R-AOF-1119420 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119420 Glutamate biosynthesis V none Asparagus officinalis A4U43_C07F16770 R-AOF-1125410 A4U43_C07F16770 [chloroplast stroma] R-AOF-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119443 Ammonia assimilation cycle none Asparagus officinalis A4U43_C07F16990 R-AOF-9927865 A4U43_C07F16990 [nucleoplasm] R-AOF-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8934257 Transition from vegetative to reproductive shoot apical meristem none Asparagus officinalis A4U43_C07F1800 R-AOF-9684723 A4U43_C07F1800 [cytosol] R-AOF-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9609102 Flower development none Asparagus officinalis A4U43_C07F18300 R-AOF-1128385-2 A4U43_C07F18300 [nucleoplasm] R-AOF-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5608118 Auxin signalling none Asparagus officinalis A4U43_C07F1860 R-AOF-5149632-2 A4U43_C07F1860 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C07F1870 R-AOF-9675820 A4U43_C07F1870 [nucleoplasm] R-AOF-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675824 DNA replication Initiation none Asparagus officinalis A4U43_C07F19160 R-AOF-5633270 A4U43_C07F19160 [cytosol] R-AOF-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119495 Citrulline biosynthesis none Asparagus officinalis A4U43_C07F19710 R-AOF-1123092 A4U43_C07F19710 [cytosol] R-AOF-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119278 PRPP biosynthesis I none Asparagus officinalis A4U43_C07F19720 R-AOF-1129113 A4U43_C07F19720 [cytosol] R-AOF-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119298 Glutathione redox reactions II none Asparagus officinalis A4U43_C07F19720 R-AOF-1129113 A4U43_C07F19720 [cytosol] R-AOF-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119437 Glutathione redox reactions I none Asparagus officinalis A4U43_C07F19800 R-AOF-9640789 A4U43_C07F19800 [nucleoplasm] R-AOF-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640760 G1 phase none Asparagus officinalis A4U43_C07F19970 R-AOF-1128327 A4U43_C07F19970 [cytosol] R-AOF-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119267 Phenylalanine degradation III none Asparagus officinalis A4U43_C07F20610 R-AOF-1124778 A4U43_C07F20610 [plastid stroma] R-AOF-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119464 Methylerythritol phosphate pathway none Asparagus officinalis A4U43_C07F21100 R-AOF-1127733 A4U43_C07F21100 [cytosol] R-AOF-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119460 Isoleucine biosynthesis from threonine none Asparagus officinalis A4U43_C07F21100 R-AOF-1127733 A4U43_C07F21100 [cytosol] R-AOF-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119600 Valine biosynthesis none Asparagus officinalis A4U43_C07F21580 R-AOF-5632121 A4U43_C07F21580 [nucleoplasm] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C07F21670 R-AOF-1125670 A4U43_C07F21670 [cytosol] R-AOF-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119393 Asparagine degradation I none Asparagus officinalis A4U43_C07F23190 R-AOF-1124861 A4U43_C07F23190 [plastid stroma] R-AOF-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119449 Carotenoid biosynthesis none Asparagus officinalis A4U43_C07F23400 R-AOF-5221147-2 A4U43_C07F23400 [cytosol] R-AOF-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-3899351 Abscisic acid (ABA) mediated signaling none Asparagus officinalis A4U43_C07F23470 R-AOF-1124095 A4U43_C07F23470 [cytosol] R-AOF-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119452 Galactose degradation II none Asparagus officinalis A4U43_C07F23680 R-AOF-1128641-2 A4U43_C07F23680 [cytosol] R-AOF-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119331 Cysteine biosynthesis I none Asparagus officinalis A4U43_C07F24030 R-AOF-8868994 A4U43_C07F24030 [endoplasmic reticulum membrane] R-AOF-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8868949 Intracellular auxin transport none Asparagus officinalis A4U43_C07F2430 R-AOF-9611544 SPL11 [nucleoplasm] R-AOF-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9611432 Recognition of fungal and bacterial pathogens and immunity response none Asparagus officinalis A4U43_C07F2430 R-AOF-9611440 phospho-phosphorylated-SPL11 [nucleoplasm] R-AOF-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9611432 Recognition of fungal and bacterial pathogens and immunity response none Asparagus officinalis A4U43_C07F24320 R-AOF-1129187 A4U43_C07F24320 [cytosol] R-AOF-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119276 Choline biosynthesis III none Asparagus officinalis A4U43_C07F24970 R-AOF-1124249 A4U43_C07F24970 [cytosol] R-AOF-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119428 GDP-D-rhamnose biosynthesis none Asparagus officinalis A4U43_C07F24970 R-AOF-1124249 A4U43_C07F24970 [cytosol] R-AOF-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Asparagus officinalis A4U43_C07F25000 R-AOF-5654911 A4U43_C07F25000 [Golgi lumen] R-AOF-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5654909 Xylan biosynthesis none Asparagus officinalis A4U43_C07F25130 R-AOF-9681910 A4U43_C07F25130 [Golgi membrane] R-AOF-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119574 UDP-L-arabinose biosynthesis and transport none Asparagus officinalis A4U43_C07F25410 R-AOF-9918210 granule-bound starch synthase 1 (GBSSI, or Waxy) [amyloplast] R-AOF-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119477 Starch biosynthesis none Asparagus officinalis A4U43_C07F25410 R-AOF-9918222 A4U43_C07F25410 [amyloplast] R-AOF-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119477 Starch biosynthesis none Asparagus officinalis A4U43_C07F25410 R-AOF-9626344 A4U43_C07F25410 [plastid stroma] R-AOF-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9626305 Regulatory network of nutrient accumulation none Asparagus officinalis A4U43_C07F25730 R-AOF-9658563 A4U43_C07F25730 [endoplasmic reticulum lumen] R-AOF-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119502 Allantoin degradation none Asparagus officinalis A4U43_C07F26280 R-AOF-1129082 A4U43_C07F26280 [mitochondrial matrix] R-AOF-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119445 Beta-alanine biosynthesis II none Asparagus officinalis A4U43_C07F2630 R-AOF-9658613 A4U43_C07F2630 [plastid stroma] R-AOF-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119263 Arginine biosynthesis none Asparagus officinalis A4U43_C07F2630 R-AOF-9658613 A4U43_C07F2630 [plastid stroma] R-AOF-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119622 Arginine biosynthesis II (acetyl cycle) none Asparagus officinalis A4U43_C07F26450 R-AOF-4827040 A4U43_C07F26450 [plastid stroma] R-AOF-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-4827054 Tetrapyrrole biosynthesis I none Asparagus officinalis A4U43_C07F26720 R-AOF-9645954 A4U43_C07F26720 [nucleoplasm] R-AOF-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9645850 Activation of pre-replication complex none Asparagus officinalis A4U43_C07F26730 R-AOF-1126440 A4U43_C07F26730 [plastid stroma] R-AOF-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119430 Chorismate biosynthesis none Asparagus officinalis A4U43_C07F27210 R-AOF-1129282 A4U43_C07F27210 [cytosol] R-AOF-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119428 GDP-D-rhamnose biosynthesis none Asparagus officinalis A4U43_C07F27210 R-AOF-1129282 A4U43_C07F27210 [cytosol] R-AOF-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Asparagus officinalis A4U43_C07F27380 R-AOF-1125832 A4U43_C07F27380 [plastid stroma] R-AOF-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119430 Chorismate biosynthesis none Asparagus officinalis A4U43_C07F27790 R-AOF-1123786 A4U43_C07F27790 R-AOF-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119403 Removal of superoxide radicals none Asparagus officinalis A4U43_C07F28340 R-AOF-8879061-2 LOS2 homolog [nucleoplasm] R-AOF-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8879007 Response to cold temperature none Asparagus officinalis A4U43_C07F28350 R-AOF-8879061 LOS2 homolog [nucleoplasm] R-AOF-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8879007 Response to cold temperature none Asparagus officinalis A4U43_C07F29550 R-AOF-9681886 A4U43_C07F29550 [cytosol] R-AOF-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119574 UDP-L-arabinose biosynthesis and transport none Asparagus officinalis A4U43_C07F30380 R-AOF-4415007-2 A4U43_C07F30380 [cytosol] R-AOF-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-3899351 Abscisic acid (ABA) mediated signaling none Asparagus officinalis A4U43_C07F30380 R-AOF-4415016-2 phospho-A4U43_C07F30380 [cytosol] R-AOF-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-3899351 Abscisic acid (ABA) mediated signaling none Asparagus officinalis A4U43_C07F30380 R-AOF-4415007-2 A4U43_C07F30380 [cytosol] R-AOF-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9639861 Development of root hair none Asparagus officinalis A4U43_C07F3050 R-AOF-3240748 A4U43_C07F3050 [cytosol] R-AOF-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Asparagus officinalis A4U43_C07F30510 R-AOF-5138500 A4U43_C07F30510 [plastid stroma] R-AOF-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119263 Arginine biosynthesis none Asparagus officinalis A4U43_C07F30510 R-AOF-1129397 A4U43_C07F30510 [cytosol] R-AOF-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119273 Lysine biosynthesis I none Asparagus officinalis A4U43_C07F30510 R-AOF-1129397 A4U43_C07F30510 [cytosol] R-AOF-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119283 Lysine biosynthesis II none Asparagus officinalis A4U43_C07F30510 R-AOF-1129397 A4U43_C07F30510 [cytosol] R-AOF-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119295 Homoserine biosynthesis none Asparagus officinalis A4U43_C07F30510 R-AOF-5138500 A4U43_C07F30510 [plastid stroma] R-AOF-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119539 Ornithine biosynthesis none Asparagus officinalis A4U43_C07F30510 R-AOF-5138500 A4U43_C07F30510 [plastid stroma] R-AOF-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119622 Arginine biosynthesis II (acetyl cycle) none Asparagus officinalis A4U43_C07F31010 R-AOF-5608137 A4U43_C07F31010 [nucleoplasm] R-AOF-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5608118 Auxin signalling none Asparagus officinalis A4U43_C07F31510 R-AOF-1129247 A4U43_C07F31510 [mitochondrial inner membrane] R-AOF-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119533 TCA cycle (plant) none Asparagus officinalis A4U43_C07F31590 R-AOF-6788026 A4U43_C07F31590 [cytosol] R-AOF-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-6788019 Salicylic acid signaling none Asparagus officinalis A4U43_C07F31600 R-AOF-9626337 A4U43_C07F31600 [Golgi-associated vesicle] R-AOF-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9626305 Regulatory network of nutrient accumulation none Asparagus officinalis A4U43_C07F3170 R-AOF-1124274 A4U43_C07F3170 [cytosol] R-AOF-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119513 Pinobanksin biosynthesis none Asparagus officinalis A4U43_C07F3170 R-AOF-1124274 A4U43_C07F3170 [cytosol] R-AOF-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119531 Flavonoid biosynthesis none Asparagus officinalis A4U43_C07F31700 R-AOF-9025508 A4U43_C07F31700 [endoplasmic reticulum membrane] R-AOF-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119325 Sphingolipid metabolism none Asparagus officinalis A4U43_C07F32140 R-AOF-1122892 A4U43_C07F32140 [nucleoplasm] R-AOF-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5608118 Auxin signalling none Asparagus officinalis A4U43_C07F32140 R-AOF-1122892 A4U43_C07F32140 [nucleoplasm] R-AOF-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9030557 Lateral root initiation none Asparagus officinalis A4U43_C07F32140 R-AOF-1122892 A4U43_C07F32140 [nucleoplasm] R-AOF-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9030654 Primary root development none Asparagus officinalis A4U43_C07F32240 R-AOF-9682506-2 A4U43_C07F32240 [cytosol] R-AOF-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119410 Ascorbate biosynthesis none Asparagus officinalis A4U43_C07F32620 R-AOF-9924379 HSFA2D [nucleoplasm] R-AOF-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9924451 Shoot (tiller) formation and regulation of tiller angle none Asparagus officinalis A4U43_C07F3320 R-AOF-9639217 A4U43_C07F3320 [plasma membrane] R-AOF-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9639136 Response to Aluminum stress none Asparagus officinalis A4U43_C07F33400 R-AOF-1125151 A4U43_C07F33400 [cytosol] R-AOF-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119400 Methionine biosynthesis II none Asparagus officinalis A4U43_C07F33400 R-AOF-1125151 A4U43_C07F33400 [cytosol] R-AOF-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119501 S-adenosyl-L-methionine cycle none Asparagus officinalis A4U43_C07F33500 R-AOF-1127467-2 A4U43_C07F33500 [cytosol] R-AOF-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119456 Brassinosteroid biosynthesis II none Asparagus officinalis A4U43_C07F33630 R-AOF-9826669 OsYABBY6 [nucleoplasm] R-AOF-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Asparagus officinalis A4U43_C07F3380 R-AOF-1130032 A4U43_C07F3380 [mitochondrial inner membrane] R-AOF-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119260 Cardiolipin biosynthesis none Asparagus officinalis A4U43_C07F34280 R-AOF-8987473 A4U43_C07F34280 [peroxisomal matrix] R-AOF-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119312 Photorespiration none Asparagus officinalis A4U43_C07F34280 R-AOF-1124984 A4U43_C07F34280 [cytosol] R-AOF-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119596 Glutamate biosynthesis I none Asparagus officinalis A4U43_C07F34750 R-AOF-1128989-2 A4U43_C07F34750 [plastid stroma] R-AOF-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119509 Histidine biosynthesis I none Asparagus officinalis A4U43_C07F34850 R-AOF-1123525 A4U43_C07F34850 [cytosol] R-AOF-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119384 NAD biosynthesis I (from aspartate) none Asparagus officinalis A4U43_C07F34980 R-AOF-1130308 A4U43_C07F34980 [plastid stroma] R-AOF-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119430 Chorismate biosynthesis none Asparagus officinalis A4U43_C07F35220 R-AOF-9640752-2 A4U43_C07F35220 [nucleoplasm] R-AOF-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640882 Assembly of pre-replication complex none Asparagus officinalis A4U43_C07F35220 R-AOF-9640752-2 A4U43_C07F35220 [nucleoplasm] R-AOF-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9645850 Activation of pre-replication complex none Asparagus officinalis A4U43_C07F35480 R-AOF-1122934-2 A4U43_C07F35480 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C07F35660 R-AOF-1127031 A4U43_C07F35660 [cytosol] R-AOF-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119460 Isoleucine biosynthesis from threonine none Asparagus officinalis A4U43_C07F36030 R-AOF-1128874 A4U43_C07F36030 [chloroplast] R-AOF-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119494 Tryptophan biosynthesis none Asparagus officinalis A4U43_C07F3620 R-AOF-9608682 A4U43_C07F3620 [nucleoplasm] R-AOF-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8934036 Long day regulated expression of florigens none Asparagus officinalis A4U43_C07F3620 R-AOF-9608682 A4U43_C07F3620 [nucleoplasm] R-AOF-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9608575 Reproductive meristem phase change none Asparagus officinalis A4U43_C07F3620 R-AOF-9608606 A4U43_C07F3620 [cytosol] R-AOF-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9608575 Reproductive meristem phase change none Asparagus officinalis A4U43_C07F36640 R-AOF-1130222 A4U43_C07F36640 [cytosol] R-AOF-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119596 Glutamate biosynthesis I none Asparagus officinalis A4U43_C07F36670 R-AOF-1129561 A4U43_C07F36670 [cytosol] R-AOF-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119452 Galactose degradation II none Asparagus officinalis A4U43_C07F36670 R-AOF-1129561 A4U43_C07F36670 [cytosol] R-AOF-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119465 Sucrose biosynthesis none Asparagus officinalis A4U43_C07F36690 R-AOF-1128322 A4U43_C07F36690 [cytosol] R-AOF-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119384 NAD biosynthesis I (from aspartate) none Asparagus officinalis A4U43_C07F36720 R-AOF-6788201 A4U43_C07F36720 [nucleoplasm] R-AOF-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-6788019 Salicylic acid signaling none Asparagus officinalis A4U43_C07F3680 R-AOF-9681885-2 A4U43_C07F3680 [Golgi membrane] R-AOF-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119574 UDP-L-arabinose biosynthesis and transport none Asparagus officinalis A4U43_C07F36810 R-AOF-1250417 A4U43_C07F36810 [cytosol] R-AOF-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119374 Abscisic acid biosynthesis none Asparagus officinalis A4U43_C07F36890 R-AOF-1130222-2 A4U43_C07F36890 [cytosol] R-AOF-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119596 Glutamate biosynthesis I none Asparagus officinalis A4U43_C07F3710 R-AOF-9675423 A4U43_C07F3710 [nucleoplasm] R-AOF-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675508 Root elongation none Asparagus officinalis A4U43_C07F3710 R-AOF-9930290 MPK5 [nucleoplasm] R-AOF-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9766881 TF network involved in salinity response none Asparagus officinalis A4U43_C07F37120 R-AOF-1128319 A4U43_C07F37120 [cytosol] R-AOF-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119341 Galactosylcyclitol biosynthesis none Asparagus officinalis A4U43_C07F37220 R-AOF-1127443 A4U43_C07F37220 [amyloplast] R-AOF-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119477 Starch biosynthesis none Asparagus officinalis A4U43_C07F37220 R-AOF-1122818 A4U43_C07F37220 [cytosol] R-AOF-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119477 Starch biosynthesis none Asparagus officinalis A4U43_C07F37230 R-AOF-1126307 A4U43_C07F37230 [cytosol] R-AOF-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119370 Sterol biosynthesis none Asparagus officinalis A4U43_C07F37630 R-AOF-1127999 A4U43_C07F37630 [mitochondrial inner membrane] R-AOF-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119260 Cardiolipin biosynthesis none Asparagus officinalis A4U43_C07F38440 R-AOF-5149657 A4U43_C07F38440 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C07F38440 R-AOF-1129239 A4U43_C07F38440 [cytosol] R-AOF-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119570 Cytosolic glycolysis none Asparagus officinalis A4U43_C07F38640 R-AOF-9675274 A4U43_C07F38640 [nucleoplasm] R-AOF-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9030654 Primary root development none Asparagus officinalis A4U43_C07F38670 R-AOF-1125237-2 A4U43_C07F38670 [mitochondrial matrix] R-AOF-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119533 TCA cycle (plant) none Asparagus officinalis A4U43_C07F3870 R-AOF-5654933 A4U43_C07F3870 [Golgi lumen] R-AOF-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5654909 Xylan biosynthesis none Asparagus officinalis A4U43_C07F38700 R-AOF-5632241 A4U43_C07F38700 [nucleoplasm] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C07F38790 R-AOF-1129867 A4U43_C07F38790 [chloroplast] R-AOF-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119494 Tryptophan biosynthesis none Asparagus officinalis A4U43_C07F38810 R-AOF-9918175 A4U43_C07F38810 [amyloplast] R-AOF-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119477 Starch biosynthesis none Asparagus officinalis A4U43_C07F39370 R-AOF-9640752 A4U43_C07F39370 [nucleoplasm] R-AOF-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640882 Assembly of pre-replication complex none Asparagus officinalis A4U43_C07F39370 R-AOF-9640752 A4U43_C07F39370 [nucleoplasm] R-AOF-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9645850 Activation of pre-replication complex none Asparagus officinalis A4U43_C07F39430 R-AOF-9025487-2 A4U43_C07F39430 [cytosol] R-AOF-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119325 Sphingolipid metabolism none Asparagus officinalis A4U43_C07F400 R-AOF-5149683-2 A4U43_C07F400 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C07F4210 R-AOF-9675399-2 A4U43_C07F4210 [nucleoplasm] R-AOF-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9030654 Primary root development none Asparagus officinalis A4U43_C07F4220 R-AOF-1129539 A4U43_C07F4220 [cytosol] R-AOF-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119610 Biotin biosynthesis II none Asparagus officinalis A4U43_C07F430 R-AOF-8986695 A4U43_C07F430 [endoplasmic reticulum membrane] R-AOF-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8986768 Anther and pollen development none Asparagus officinalis A4U43_C07F4890 R-AOF-1129616 A4U43_C07F4890 [cytosol] R-AOF-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119300 Glycolipid desaturation none Asparagus officinalis A4U43_C07F500 R-AOF-9640689-2 A4U43_C07F500 [nucleoplasm] R-AOF-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675782 Maturation none Asparagus officinalis A4U43_C07F500 R-AOF-9640689-2 A4U43_C07F500 [nucleoplasm] R-AOF-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675815 Leading strand synthesis none Asparagus officinalis A4U43_C07F500 R-AOF-9640689-2 A4U43_C07F500 [nucleoplasm] R-AOF-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675885 Lagging strand synthesis none Asparagus officinalis A4U43_C07F550 R-AOF-1127082 A4U43_C07F550 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C07F5540 R-AOF-1129811-2 A4U43_C07F5540 [mitochondrion] R-AOF-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119403 Removal of superoxide radicals none Asparagus officinalis A4U43_C07F6500 R-AOF-1124190-2 A4U43_C07F6500 [plastid stroma] R-AOF-1119412 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119412 Chlorophyll a biosynthesis I none Asparagus officinalis A4U43_C07F6720 R-AOF-9025294-2 A4U43_C07F6720 [cytosol] R-AOF-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119267 Phenylalanine degradation III none Asparagus officinalis A4U43_C07F6720 R-AOF-1124944-2 A4U43_C07F6720 [plastid stroma] R-AOF-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119460 Isoleucine biosynthesis from threonine none Asparagus officinalis A4U43_C07F6720 R-AOF-1127774-2 A4U43_C07F6720 [cytosol] R-AOF-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119460 Isoleucine biosynthesis from threonine none Asparagus officinalis A4U43_C07F6720 R-AOF-1124944-2 A4U43_C07F6720 [plastid stroma] R-AOF-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119486 IAA biosynthesis I none Asparagus officinalis A4U43_C07F6720 R-AOF-1127774-2 A4U43_C07F6720 [cytosol] R-AOF-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119486 IAA biosynthesis I none Asparagus officinalis A4U43_C07F6720 R-AOF-1124944-2 A4U43_C07F6720 [plastid stroma] R-AOF-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119502 Allantoin degradation none Asparagus officinalis A4U43_C07F6720 R-AOF-1124944-2 A4U43_C07F6720 [plastid stroma] R-AOF-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119600 Valine biosynthesis none Asparagus officinalis A4U43_C07F6720 R-AOF-1127774-2 A4U43_C07F6720 [cytosol] R-AOF-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119600 Valine biosynthesis none Asparagus officinalis A4U43_C07F6890 R-AOF-5138505-2 A4U43_C07F6890 [plastid stroma] R-AOF-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119263 Arginine biosynthesis none Asparagus officinalis A4U43_C07F6890 R-AOF-5138505-2 A4U43_C07F6890 [plastid stroma] R-AOF-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119539 Ornithine biosynthesis none Asparagus officinalis A4U43_C07F6890 R-AOF-5138505-2 A4U43_C07F6890 [plastid stroma] R-AOF-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119622 Arginine biosynthesis II (acetyl cycle) none Asparagus officinalis A4U43_C07F6970 R-AOF-1127076 A4U43_C07F6970 [cytosol] R-AOF-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119418 Suberin biosynthesis none Asparagus officinalis A4U43_C07F6970 R-AOF-1127076 A4U43_C07F6970 [cytosol] R-AOF-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119582 Phenylpropanoid biosynthesis, initial reactions none Asparagus officinalis A4U43_C07F7080 R-AOF-1124234 A4U43_C07F7080 [cytosol] R-AOF-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119436 Peptidoglycan biosynthesis I none Asparagus officinalis A4U43_C07F7550 R-AOF-8868904 A4U43_C07F7550 [endoplasmic reticulum membrane] R-AOF-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8868949 Intracellular auxin transport none Asparagus officinalis A4U43_C07F7650 R-AOF-1129208 A4U43_C07F7650 [chloroplast envelope] R-AOF-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119402 Phospholipid biosynthesis I none Asparagus officinalis A4U43_C07F8670 R-AOF-9918267 ISA2 [amyloplast] R-AOF-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119477 Starch biosynthesis none Asparagus officinalis A4U43_C07F8760 R-AOF-1129629 A4U43_C07F8760 [plastid stroma] R-AOF-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119293 Glutamine biosynthesis I none Asparagus officinalis A4U43_C07F8760 R-AOF-1129629 A4U43_C07F8760 [plastid stroma] R-AOF-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119443 Ammonia assimilation cycle none Asparagus officinalis A4U43_C07F9370 R-AOF-5679398 A4U43_C07F9370 [cytosol] R-AOF-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5679411 Gibberellin signaling none Asparagus officinalis A4U43_C09F100 R-AOF-1124067 A4U43_C09F100 [amyloplast] R-AOF-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119477 Starch biosynthesis none Asparagus officinalis A4U43_C09F100 R-AOF-9626520 A4U43_C09F100 [plastid stroma] R-AOF-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9626305 Regulatory network of nutrient accumulation none Asparagus officinalis A4U43_C09F11610 R-AOF-1127916 A4U43_C09F11610 [plastid stroma] R-AOF-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119367 Polyisoprenoid biosynthesis none Asparagus officinalis A4U43_C09F11610 R-AOF-1127916 A4U43_C09F11610 [plastid stroma] R-AOF-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119615 Mevalonate pathway none Asparagus officinalis A4U43_C09F12150 R-AOF-1129029 A4U43_C09F12150 [cytosol] R-AOF-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119501 S-adenosyl-L-methionine cycle none Asparagus officinalis A4U43_C09F13650 R-AOF-1130231 A4U43_C09F13650 [endoplasmic reticulum membrane] R-AOF-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119325 Sphingolipid metabolism none Asparagus officinalis A4U43_C09F14410 R-AOF-9658702 A4U43_C09F14410 [plastid stroma] R-AOF-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119297 Beta-alanine biosynthesis III none Asparagus officinalis A4U43_C09F14560 R-AOF-5608203 A4U43_C09F14560 [nucleoplasm] R-AOF-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5608118 Auxin signalling none Asparagus officinalis A4U43_C09F14560 R-AOF-5608203 A4U43_C09F14560 [nucleoplasm] R-AOF-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9608575 Reproductive meristem phase change none Asparagus officinalis A4U43_C09F14560 R-AOF-9658968 A4U43_C09F14560 [cytosol] R-AOF-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9608575 Reproductive meristem phase change none Asparagus officinalis A4U43_C09F14610 R-AOF-9025492-5 A4U43_C09F14610 [endoplasmic reticulum membrane] R-AOF-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119325 Sphingolipid metabolism none Asparagus officinalis A4U43_C09F14610 R-AOF-1126933-5 A4U43_C09F14610 [cytosol] R-AOF-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119610 Biotin biosynthesis II none Asparagus officinalis A4U43_C09F14630 R-AOF-9025492-4 A4U43_C09F14630 [endoplasmic reticulum membrane] R-AOF-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119325 Sphingolipid metabolism none Asparagus officinalis A4U43_C09F14630 R-AOF-1126933-4 A4U43_C09F14630 [cytosol] R-AOF-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119610 Biotin biosynthesis II none Asparagus officinalis A4U43_C09F14640 R-AOF-9025492-2 A4U43_C09F14640 [endoplasmic reticulum membrane] R-AOF-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119325 Sphingolipid metabolism none Asparagus officinalis A4U43_C09F14640 R-AOF-1126933-2 A4U43_C09F14640 [cytosol] R-AOF-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119610 Biotin biosynthesis II none Asparagus officinalis A4U43_C09F14890 R-AOF-1126714 A4U43_C09F14890 [cytosol] R-AOF-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119273 Lysine biosynthesis I none Asparagus officinalis A4U43_C09F14890 R-AOF-1126714 A4U43_C09F14890 [cytosol] R-AOF-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119283 Lysine biosynthesis II none Asparagus officinalis A4U43_C09F14890 R-AOF-1126714 A4U43_C09F14890 [cytosol] R-AOF-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119295 Homoserine biosynthesis none Asparagus officinalis A4U43_C09F14890 R-AOF-5606484 A4U43_C09F14890 [plastid stroma] R-AOF-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119419 Lysine biosynthesis VI none Asparagus officinalis A4U43_C09F1500 R-AOF-8854121 A4U43_C09F1500 [cytosol] R-AOF-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119556 Choline biosynthesis I none Asparagus officinalis A4U43_C09F15360 R-AOF-1129411 A4U43_C09F15360 [cytosol] R-AOF-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119496 Pantothenate biosynthesis I none Asparagus officinalis A4U43_C09F15360 R-AOF-1129411 A4U43_C09F15360 [cytosol] R-AOF-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119544 Pantothenate biosynthesis II none Asparagus officinalis A4U43_C09F15380 R-AOF-9640753 A4U43_C09F15380 [nucleoplasm] R-AOF-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640882 Assembly of pre-replication complex none Asparagus officinalis A4U43_C09F15380 R-AOF-9640753 A4U43_C09F15380 [nucleoplasm] R-AOF-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9645850 Activation of pre-replication complex none Asparagus officinalis A4U43_C09F15380 R-AOF-9640753 A4U43_C09F15380 [nucleoplasm] R-AOF-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675824 DNA replication Initiation none Asparagus officinalis A4U43_C09F15760 R-AOF-1127873 A4U43_C09F15760 [plastid stroma] R-AOF-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119424 Plastid glycolysis none Asparagus officinalis A4U43_C09F15760 R-AOF-1127873 A4U43_C09F15760 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C09F15800 R-AOF-1126354 A4U43_C09F15800 [cytosol] R-AOF-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119531 Flavonoid biosynthesis none Asparagus officinalis A4U43_C09F15810 R-AOF-1123596-2 A4U43_C09F15810 [plastid stroma] R-AOF-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119509 Histidine biosynthesis I none Asparagus officinalis A4U43_C09F16350 R-AOF-9658676 A4U43_C09F16350 [cytosol] R-AOF-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119567 Beta-alanine biosynthesis I none Asparagus officinalis A4U43_C09F2180 R-AOF-1122785-2 A4U43_C09F2180 [cytosol] R-AOF-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119273 Lysine biosynthesis I none Asparagus officinalis A4U43_C09F2180 R-AOF-1126726-2 A4U43_C09F2180 [cytosol] R-AOF-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119273 Lysine biosynthesis I none Asparagus officinalis A4U43_C09F2180 R-AOF-1122785-2 A4U43_C09F2180 [cytosol] R-AOF-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119283 Lysine biosynthesis II none Asparagus officinalis A4U43_C09F2180 R-AOF-1126726-2 A4U43_C09F2180 [cytosol] R-AOF-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119283 Lysine biosynthesis II none Asparagus officinalis A4U43_C09F2180 R-AOF-1122785-2 A4U43_C09F2180 [cytosol] R-AOF-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119570 Cytosolic glycolysis none Asparagus officinalis A4U43_C09F2240 R-AOF-9645941 A4U43_C09F2240 [nucleoplasm] R-AOF-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9645850 Activation of pre-replication complex none Asparagus officinalis A4U43_C09F2500 R-AOF-9611889 A4U43_C09F2500 [mitochondrial matrix] R-AOF-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119479 Valine degradation none Asparagus officinalis A4U43_C09F2550 R-AOF-1126488 A4U43_C09F2550 [mitochondrial inner membrane] R-AOF-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119402 Phospholipid biosynthesis I none Asparagus officinalis A4U43_C09F2680 R-AOF-5084918 A4U43_C09F2680 [cytosol] R-AOF-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119624 Methionine salvage pathway none Asparagus officinalis A4U43_C09F2700 R-AOF-1125275 A4U43_C09F2700 [cytosol] R-AOF-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119629 Thiamine biosynthesis none Asparagus officinalis A4U43_C09F3050 R-AOF-5608123 A4U43_C09F3050 [nucleoplasm] R-AOF-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5608118 Auxin signalling none Asparagus officinalis A4U43_C09F360 R-AOF-9608694 A4U43_C09F360 [cytosol] R-AOF-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9928831 Severe drought none Asparagus officinalis A4U43_C09F360 R-AOF-9928774 A4U43_C09F360 [nucleoplasm] R-AOF-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9928831 Severe drought none Asparagus officinalis A4U43_C09F430 R-AOF-6787863 A4U43_C09F430 [nucleoplasm] R-AOF-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-6788019 Salicylic acid signaling none Asparagus officinalis A4U43_C09F5180 R-AOF-1124523 A4U43_C09F5180 [cytosol] R-AOF-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119460 Isoleucine biosynthesis from threonine none Asparagus officinalis A4U43_C09F5180 R-AOF-1124523 A4U43_C09F5180 [cytosol] R-AOF-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119600 Valine biosynthesis none Asparagus officinalis A4U43_C09F5250 R-AOF-9675272 A4U43_C09F5250 [plasma membrane] R-AOF-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9030654 Primary root development none Asparagus officinalis A4U43_C09F570 R-AOF-1125374-2 A4U43_C09F570 [cytosol] R-AOF-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119586 Cyanate degradation none Asparagus officinalis A4U43_C09F6390 R-AOF-9645947 A4U43_C09F6390 [nucleoplasm] R-AOF-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9645850 Activation of pre-replication complex none Asparagus officinalis A4U43_C09F6390 R-AOF-9645947 A4U43_C09F6390 [nucleoplasm] R-AOF-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675782 Maturation none Asparagus officinalis A4U43_C09F6390 R-AOF-9645947 A4U43_C09F6390 [nucleoplasm] R-AOF-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675815 Leading strand synthesis none Asparagus officinalis A4U43_C09F6390 R-AOF-9645947 A4U43_C09F6390 [nucleoplasm] R-AOF-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675824 DNA replication Initiation none Asparagus officinalis A4U43_C09F6390 R-AOF-9645947 A4U43_C09F6390 [nucleoplasm] R-AOF-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675885 Lagging strand synthesis none Asparagus officinalis A4U43_C09F6400 R-AOF-1129851-2 A4U43_C09F6400 [mitochondrial matrix] R-AOF-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119533 TCA cycle (plant) none Asparagus officinalis A4U43_C09F6400 R-AOF-1129851-2 A4U43_C09F6400 [mitochondrial matrix] R-AOF-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119540 Leucine biosynthesis none Asparagus officinalis A4U43_C09F6430 R-AOF-9675807 A4U43_C09F6430 [nucleoplasm] R-AOF-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675782 Maturation none Asparagus officinalis A4U43_C09F6430 R-AOF-9675807 A4U43_C09F6430 [nucleoplasm] R-AOF-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675815 Leading strand synthesis none Asparagus officinalis A4U43_C09F6430 R-AOF-9675807 A4U43_C09F6430 [nucleoplasm] R-AOF-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675885 Lagging strand synthesis none Asparagus officinalis A4U43_C09F6900 R-AOF-8987574-2 A4U43_C09F6900 [mitochondrial matrix] R-AOF-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119311 Glycine biosynthesis I none Asparagus officinalis A4U43_C09F8570 R-AOF-1127151 A4U43_C09F8570 [cytosol] R-AOF-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119384 NAD biosynthesis I (from aspartate) none Asparagus officinalis A4U43_C09F9140 R-AOF-9025351 A4U43_C09F9140 [cytosol] R-AOF-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119402 Phospholipid biosynthesis I none Asparagus officinalis A4U43_C09F920 R-AOF-1123046 A4U43_C09F920 [cytosol] R-AOF-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119386 UDP-N-acetylgalactosamine biosynthesis none Asparagus officinalis A4U43_C09F9450 R-AOF-1125550 A4U43_C09F9450 [cytosol] R-AOF-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119623 Acyl-CoA synthetase pathway none Asparagus officinalis A4U43_C09F9600 R-AOF-9675500 A4U43_C09F9600 [endoplasmic reticulum membrane] R-AOF-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9030654 Primary root development none Asparagus officinalis A4U43_C09F9860 R-AOF-1126955 A4U43_C09F9860 [plastid] R-AOF-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119407 Ureide biosynthesis none Asparagus officinalis A4U43_C10F10190 R-AOF-9675481-2 A4U43_C10F10190 [cytosol] R-AOF-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9030654 Primary root development none Asparagus officinalis A4U43_C10F11060 R-AOF-1127161 A4U43_C10F11060 [cytosol] R-AOF-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119486 IAA biosynthesis I none Asparagus officinalis A4U43_C10F1120 R-AOF-9638999 A4U43_C10F1120 [cytosol] R-AOF-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119434 Phytic acid biosynthesis (lipid-independent) none Asparagus officinalis A4U43_C10F11960 R-AOF-1128328-2 A4U43_C10F11960 [cytosol] R-AOF-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119615 Mevalonate pathway none Asparagus officinalis A4U43_C10F1230 R-AOF-1127509 A4U43_C10F1230 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C10F13430 R-AOF-1124791 A4U43_C10F13430 [cytosol] R-AOF-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119610 Biotin biosynthesis II none Asparagus officinalis A4U43_C10F14830 R-AOF-5225766-2 A4U43_C10F14830 [nucleoplasm] R-AOF-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5225756 Ethylene mediated signaling none Asparagus officinalis A4U43_C10F15540 R-AOF-4754220 A4U43_C10F15540 [plastid stroma] R-AOF-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119449 Carotenoid biosynthesis none Asparagus officinalis A4U43_C10F15540 R-AOF-1126847 A4U43_C10F15540 [cytosol] R-AOF-1119492 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119492 Lactucaxanthin biosynthesis none Asparagus officinalis A4U43_C10F15690 R-AOF-9640698 A4U43_C10F15690 [nucleoplasm] R-AOF-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640887 G1/S transition none Asparagus officinalis A4U43_C10F15850 R-AOF-6787093 A4U43_C10F15850 [nucleoplasm] R-AOF-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-6787011 Jasmonic acid signaling none Asparagus officinalis A4U43_C10F16170 R-AOF-1130416 A4U43_C10F16170 [mitochondrial matrix] R-AOF-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119337 Proline degradation none Asparagus officinalis A4U43_C10F16170 R-AOF-1130416 A4U43_C10F16170 [mitochondrial matrix] R-AOF-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119495 Citrulline biosynthesis none Asparagus officinalis A4U43_C10F16240 R-AOF-1126615 A4U43_C10F16240 [cytosol] R-AOF-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119437 Glutathione redox reactions I none Asparagus officinalis A4U43_C10F17310 R-AOF-9626474 A4U43_C10F17310 [trans-Golgi network membrane] R-AOF-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9626305 Regulatory network of nutrient accumulation none Asparagus officinalis A4U43_C10F17390 R-AOF-5632129 A4U43_C10F17390 [nucleoplasm] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_C10F17400 R-AOF-1122785 A4U43_C10F17400 [cytosol] R-AOF-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119273 Lysine biosynthesis I none Asparagus officinalis A4U43_C10F17400 R-AOF-1126726 A4U43_C10F17400 [cytosol] R-AOF-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119273 Lysine biosynthesis I none Asparagus officinalis A4U43_C10F17400 R-AOF-1122785 A4U43_C10F17400 [cytosol] R-AOF-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119283 Lysine biosynthesis II none Asparagus officinalis A4U43_C10F17400 R-AOF-1126726 A4U43_C10F17400 [cytosol] R-AOF-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119283 Lysine biosynthesis II none Asparagus officinalis A4U43_C10F17400 R-AOF-1122785 A4U43_C10F17400 [cytosol] R-AOF-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119570 Cytosolic glycolysis none Asparagus officinalis A4U43_C10F17530 R-AOF-5149646-2 A4U43_C10F17530 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_C10F17530 R-AOF-1126652-2 A4U43_C10F17530 [cytosol] R-AOF-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119570 Cytosolic glycolysis none Asparagus officinalis A4U43_C10F17640 R-AOF-9828974-2 CKX3 [endoplasmic reticulum lumen] R-AOF-9828944 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9828944 Regulation of lemma joint development and leaf angle by cytokinin none Asparagus officinalis A4U43_C10F18360 R-AOF-1126828 A4U43_C10F18360 [plastid] R-AOF-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119403 Removal of superoxide radicals none Asparagus officinalis A4U43_C10F1850 R-AOF-1114864 A4U43_C10F1850 [cytosol] R-AOF-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5608118 Auxin signalling none Asparagus officinalis A4U43_C10F18630 R-AOF-5655057 A4U43_C10F18630 [Golgi lumen] R-AOF-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5655101 Xyloglucan biosynthesis none Asparagus officinalis A4U43_C10F19270 R-AOF-1126238-3 A4U43_C10F19270 [chloroplast] R-AOF-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119494 Tryptophan biosynthesis none Asparagus officinalis A4U43_C10F19470 R-AOF-8933738 A4U43_C10F19470 [nucleoplasm] R-AOF-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8933811 Circadian rhythm none Asparagus officinalis A4U43_C10F19480 R-AOF-1130235-4 A4U43_C10F19480 [cytosol] R-AOF-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119261 Salicylate biosynthesis none Asparagus officinalis A4U43_C10F19480 R-AOF-1130235-4 A4U43_C10F19480 [cytosol] R-AOF-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119418 Suberin biosynthesis none Asparagus officinalis A4U43_C10F19480 R-AOF-1130235-4 A4U43_C10F19480 [cytosol] R-AOF-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119582 Phenylpropanoid biosynthesis, initial reactions none Asparagus officinalis A4U43_C10F19500 R-AOF-1126238-2 A4U43_C10F19500 [chloroplast] R-AOF-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119494 Tryptophan biosynthesis none Asparagus officinalis A4U43_C10F1970 R-AOF-1130136-2 A4U43_C10F1970 [mitochondrial matrix] R-AOF-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119533 TCA cycle (plant) none Asparagus officinalis A4U43_C10F1970 R-AOF-1130136-2 A4U43_C10F1970 [mitochondrial matrix] R-AOF-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119540 Leucine biosynthesis none Asparagus officinalis A4U43_C10F2140 R-AOF-1128641 A4U43_C10F2140 [cytosol] R-AOF-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119331 Cysteine biosynthesis I none Asparagus officinalis A4U43_C10F2240 R-AOF-1127087 A4U43_C10F2240 [cytosol] R-AOF-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119438 Secologanin and strictosidine biosynthesis none Asparagus officinalis A4U43_C10F30 R-AOF-1128054 A4U43_C10F30 [mitochondrial matrix] R-AOF-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119479 Valine degradation none Asparagus officinalis A4U43_C10F3210 R-AOF-5146760 A4U43_C10F3210 [mitochondrial matrix] R-AOF-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119533 TCA cycle (plant) none Asparagus officinalis A4U43_C10F410 R-AOF-9675866 A4U43_C10F410 [nucleoplasm] R-AOF-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675782 Maturation none Asparagus officinalis A4U43_C10F410 R-AOF-9675866 A4U43_C10F410 [nucleoplasm] R-AOF-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675815 Leading strand synthesis none Asparagus officinalis A4U43_C10F410 R-AOF-9675866 A4U43_C10F410 [nucleoplasm] R-AOF-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675885 Lagging strand synthesis none Asparagus officinalis A4U43_C10F4350 R-AOF-1126714-2 A4U43_C10F4350 [cytosol] R-AOF-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119273 Lysine biosynthesis I none Asparagus officinalis A4U43_C10F4350 R-AOF-1126714-2 A4U43_C10F4350 [cytosol] R-AOF-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119283 Lysine biosynthesis II none Asparagus officinalis A4U43_C10F4350 R-AOF-1126714-2 A4U43_C10F4350 [cytosol] R-AOF-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119295 Homoserine biosynthesis none Asparagus officinalis A4U43_C10F4350 R-AOF-5606484-2 A4U43_C10F4350 [plastid stroma] R-AOF-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119419 Lysine biosynthesis VI none Asparagus officinalis A4U43_C10F4420 R-AOF-1128606 A4U43_C10F4420 [mitochondrial matrix] R-AOF-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119365 Lysine degradation II none Asparagus officinalis A4U43_C10F4420 R-AOF-1173244 A4U43_C10F4420 [mitochondrial matrix] R-AOF-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119533 TCA cycle (plant) none Asparagus officinalis A4U43_C10F5010 R-AOF-1124138 A4U43_C10F5010 [cytosol] R-AOF-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119394 Pantothenate and coenzyme A biosynthesis III none Asparagus officinalis A4U43_C10F5130 R-AOF-8858074 A4U43_C10F5130 [plasma membrane] R-AOF-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8858053 Polar auxin transport none Asparagus officinalis A4U43_C10F550 R-AOF-3321260-2 A4U43_C10F550 [chloroplast stroma] R-AOF-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119287 Vitamin E biosynthesis none Asparagus officinalis A4U43_C10F5650 R-AOF-9025739 A4U43_C10F5650 [plasma membrane] R-AOF-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9025727 Iron uptake and transport in root vascular system none Asparagus officinalis A4U43_C10F5650 R-AOF-9025739 A4U43_C10F5650 [plasma membrane] R-AOF-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9618218 Arsenic uptake and detoxification none Asparagus officinalis A4U43_C10F5650 R-AOF-9025739 A4U43_C10F5650 [plasma membrane] R-AOF-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9639136 Response to Aluminum stress none Asparagus officinalis A4U43_C10F570 R-AOF-9640716 A4U43_C10F570 [nucleoplasm] R-AOF-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9030654 Primary root development none Asparagus officinalis A4U43_C10F570 R-AOF-9640716 A4U43_C10F570 [nucleoplasm] R-AOF-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640882 Assembly of pre-replication complex none Asparagus officinalis A4U43_C10F570 R-AOF-9640716 A4U43_C10F570 [nucleoplasm] R-AOF-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9645850 Activation of pre-replication complex none Asparagus officinalis A4U43_C10F5960 R-AOF-1126602 A4U43_C10F5960 [cytosol] R-AOF-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119273 Lysine biosynthesis I none Asparagus officinalis A4U43_C10F5960 R-AOF-1126602 A4U43_C10F5960 [cytosol] R-AOF-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119283 Lysine biosynthesis II none Asparagus officinalis A4U43_C10F5960 R-AOF-5606494 A4U43_C10F5960 [plastid stroma] R-AOF-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119419 Lysine biosynthesis VI none Asparagus officinalis A4U43_C10F60 R-AOF-1125569 A4U43_C10F60 [cytosol] R-AOF-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119516 Trehalose biosynthesis I none Asparagus officinalis A4U43_C10F720 R-AOF-1122783 A4U43_C10F720 [chloroplast stroma] R-AOF-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119402 Phospholipid biosynthesis I none Asparagus officinalis A4U43_C10F760 R-AOF-8854448 A4U43_C10F760 [cytosol] R-AOF-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119276 Choline biosynthesis III none Asparagus officinalis A4U43_C10F8370 R-AOF-1126344 A4U43_C10F8370 [plastid stroma] R-AOF-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119529 Sulfate activation for sulfonation none Asparagus officinalis A4U43_C10F9130 R-AOF-1123250 A4U43_C10F9130 [cytosol] R-AOF-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119265 Tetrahydrofolate biosynthesis I none Asparagus officinalis A4U43_C10F9130 R-AOF-1123250 A4U43_C10F9130 [cytosol] R-AOF-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119523 Tetrahydrofolate biosynthesis II none Asparagus officinalis A4U43_C10F9560 R-AOF-1124788 A4U43_C10F9560 [cytosol] R-AOF-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119601 Trehalose degradation II none Asparagus officinalis A4U43_C10F9660 R-AOF-1123636 A4U43_C10F9660 [cytosol] R-AOF-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119273 Lysine biosynthesis I none Asparagus officinalis A4U43_C10F9660 R-AOF-1123636 A4U43_C10F9660 [cytosol] R-AOF-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119283 Lysine biosynthesis II none Asparagus officinalis A4U43_C10F9660 R-AOF-5606471 A4U43_C10F9660 [plastid stroma] R-AOF-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119419 Lysine biosynthesis VI none Asparagus officinalis A4U43_UnF10120 R-AOF-1125341-2 A4U43_UnF10120 [cytosol] R-AOF-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119460 Isoleucine biosynthesis from threonine none Asparagus officinalis A4U43_UnF10120 R-AOF-1125341-2 A4U43_UnF10120 [cytosol] R-AOF-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119600 Valine biosynthesis none Asparagus officinalis A4U43_UnF10810 R-AOF-1126593 A4U43_UnF10810 [endosome] R-AOF-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5608118 Auxin signalling none Asparagus officinalis A4U43_UnF10810 R-AOF-5679293 A4U43_UnF10810 [plasma membrane] R-AOF-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5608118 Auxin signalling none Asparagus officinalis A4U43_UnF10810 R-AOF-8858098 A4U43_UnF10810 [plasma membrane] R-AOF-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8858053 Polar auxin transport none Asparagus officinalis A4U43_UnF11040 R-AOF-9640786 A4U43_UnF11040 [nucleoplasm] R-AOF-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640882 Assembly of pre-replication complex none Asparagus officinalis A4U43_UnF11040 R-AOF-9640786 A4U43_UnF11040 [nucleoplasm] R-AOF-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9645850 Activation of pre-replication complex none Asparagus officinalis A4U43_UnF11040 R-AOF-9640786 A4U43_UnF11040 [nucleoplasm] R-AOF-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9675824 DNA replication Initiation none Asparagus officinalis A4U43_UnF11720 R-AOF-1123465-2 A4U43_UnF11720 [plastid stroma] R-AOF-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119424 Plastid glycolysis none Asparagus officinalis A4U43_UnF11720 R-AOF-5633368-2 A4U43_UnF11720 [cytosol] R-AOF-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119601 Trehalose degradation II none Asparagus officinalis A4U43_UnF12100 R-AOF-1124037-3 A4U43_UnF12100 [mitochondrial matrix] R-AOF-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119289 Arginine degradation none Asparagus officinalis A4U43_UnF1730 R-AOF-1129809 A4U43_UnF1730 [mitochondrial inner membrane] R-AOF-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119410 Ascorbate biosynthesis none Asparagus officinalis A4U43_UnF2190 R-AOF-1122593 A4U43_UnF2190 [cytosol] R-AOF-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119436 Peptidoglycan biosynthesis I none Asparagus officinalis A4U43_UnF2190 R-AOF-1122593 A4U43_UnF2190 [cytosol] R-AOF-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119523 Tetrahydrofolate biosynthesis II none Asparagus officinalis A4U43_UnF2190 R-AOF-1122593 A4U43_UnF2190 [cytosol] R-AOF-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119617 Folate polyglutamylation I none Asparagus officinalis A4U43_UnF2360 R-AOF-1123563-2 A4U43_UnF2360 [cytosol] R-AOF-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119379 Flavin biosynthesis none Asparagus officinalis A4U43_UnF2370 R-AOF-1127527-2 A4U43_UnF2370 [cytosol] R-AOF-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Asparagus officinalis A4U43_UnF3330 R-AOF-1126513 A4U43_UnF3330 [cytosol] R-AOF-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119332 Jasmonic acid biosynthesis none Asparagus officinalis A4U43_UnF410 R-AOF-1129922 A4U43_UnF410 [plastid stroma] R-AOF-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119464 Methylerythritol phosphate pathway none Asparagus officinalis A4U43_UnF4260 R-AOF-1129924 A4U43_UnF4260 [cytosol] R-AOF-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119342 Gamma-glutamyl cycle none Asparagus officinalis A4U43_UnF4260 R-AOF-1129924 A4U43_UnF4260 [cytosol] R-AOF-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119483 Glutathione biosynthesis none Asparagus officinalis A4U43_UnF4380 R-AOF-5632312 A4U43_UnF4380 [nucleoplasm] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_UnF4380 R-AOF-5632125 phospho-A4U43_UnF4380 [nucleoplasm] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_UnF4380 R-AOF-5632342 phospho-A4U43_UnF4380 [cytosol] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_UnF4380 R-AOF-5632312 A4U43_UnF4380 [nucleoplasm] R-AOF-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5679411 Gibberellin signaling none Asparagus officinalis A4U43_UnF4850 R-AOF-2685721 A4U43_UnF4850 [cytosol] R-AOF-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119580 IAA biosynthesis II none Asparagus officinalis A4U43_UnF5590 R-AOF-8879002 A4U43_UnF5590 [nucleoplasm] R-AOF-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-8879007 Response to cold temperature none Asparagus officinalis A4U43_UnF7230 R-AOF-5608169 A4U43_UnF7230 [nucleoplasm] R-AOF-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5608118 Auxin signalling none Asparagus officinalis A4U43_UnF7250 R-AOF-1127922-2 A4U43_UnF7250 [cytosol] R-AOF-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119370 Sterol biosynthesis none Asparagus officinalis A4U43_UnF7600 R-AOF-5149683 A4U43_UnF7600 [plastid stroma] R-AOF-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119519 Calvin cycle none Asparagus officinalis A4U43_UnF7620 R-AOF-9640701 A4U43_UnF7620 [nucleoplasm] R-AOF-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9640882 Assembly of pre-replication complex none Asparagus officinalis A4U43_UnF7620 R-AOF-9640701 A4U43_UnF7620 [nucleoplasm] R-AOF-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-9645850 Activation of pre-replication complex none Asparagus officinalis A4U43_UnF8210 R-AOF-9025513 A4U43_UnF8210 [endoplasmic reticulum membrane] R-AOF-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119325 Sphingolipid metabolism none Asparagus officinalis A4U43_UnF8210 R-AOF-1129700 A4U43_UnF8210 [cytosol] R-AOF-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119610 Biotin biosynthesis II none Asparagus officinalis A4U43_UnF8880 R-AOF-1123465 A4U43_UnF8880 [plastid stroma] R-AOF-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119424 Plastid glycolysis none Asparagus officinalis A4U43_UnF8880 R-AOF-5633368 A4U43_UnF8880 [cytosol] R-AOF-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119601 Trehalose degradation II none Asparagus officinalis A4U43_UnF9500 R-AOF-5632120 A4U43_UnF9500 [nucleoplasm] R-AOF-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-5632095 Brassinosteroid signaling none Asparagus officinalis A4U43_UnF9990 R-AOF-1130032-2 A4U43_UnF9990 [mitochondrial inner membrane] R-AOF-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-AOF-1119260 Cardiolipin biosynthesis none Asparagus officinalis ADH10411 R-SMO-8987535 ADH10411 [chloroplast] R-SMO-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-SMO-1119312 Photorespiration none Selaginella moellendorffii AET0Gv20000300 R-ATA-1123296 AET0Gv20000300 [chloroplast envelope] R-ATA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119402 Phospholipid biosynthesis I none Aegilops tauschii AET0Gv20006200 R-ATA-5225766 AET0Gv20006200 [nucleoplasm] R-ATA-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5225756 Ethylene mediated signaling none Aegilops tauschii AET0Gv20017600 R-ATA-1122287-8 AET0Gv20017600 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET0Gv20035700 R-ATA-1127318-2 AET0Gv20035700 [cytosol] R-ATA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops tauschii AET0Gv20035700 R-ATA-1127318-2 AET0Gv20035700 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET0Gv20035700 R-ATA-1127318-2 AET0Gv20035700 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET0Gv20048800 R-ATA-6786904 AET0Gv20048800 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET0Gv20054600 R-ATA-1122287 AET0Gv20054600 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET0Gv20061400 R-ATA-1122287-10 AET0Gv20061400 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET0Gv20064100 R-ATA-1122287-2 AET0Gv20064100 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET0Gv20064400 R-ATA-9826677-2 AET0Gv20064400 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET0Gv20066200 R-ATA-1122287-11 AET0Gv20066200 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET0Gv20072300 R-ATA-8987535 AET0Gv20072300 [chloroplast] R-ATA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119312 Photorespiration none Aegilops tauschii AET0Gv20072600 R-ATA-1122287-4 AET0Gv20072600 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET0Gv20073000 R-ATA-1125648 AET0Gv20073000 [cytosol] R-ATA-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119513 Pinobanksin biosynthesis none Aegilops tauschii AET0Gv20073000 R-ATA-1125648 AET0Gv20073000 [cytosol] R-ATA-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119531 Flavonoid biosynthesis none Aegilops tauschii AET0Gv20073000 R-ATA-1125648 AET0Gv20073000 [cytosol] R-ATA-1119630 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119630 Resveratrol biosynthesis none Aegilops tauschii AET0Gv20100400 R-ATA-5632242-2 AET0Gv20100400 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET0Gv20105000 R-ATA-1122287-13 AET0Gv20105000 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET0Gv20111300 R-ATA-9826677-5 AET0Gv20111300 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET0Gv20120300 R-ATA-1127442 AET0Gv20120300 [cytosol] R-ATA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119281 Aspartate biosynthesis I none Aegilops tauschii AET0Gv20120300 R-ATA-5632001 AET0Gv20120300 [plastid stroma] R-ATA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119553 Asparagine biosynthesis none Aegilops tauschii AET0Gv20134400 R-ATA-1123097 AET0Gv20134400 [cytosol] R-ATA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119341 Galactosylcyclitol biosynthesis none Aegilops tauschii AET0Gv20144000 R-ATA-1128843 AET0Gv20144000 [mitochondrial matrix] R-ATA-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119337 Proline degradation none Aegilops tauschii AET0Gv20153000 R-ATA-1125766 AET0Gv20153000 [cytosol] R-ATA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119557 GA12 biosynthesis none Aegilops tauschii AET1Gv20008000 R-ATA-1123150 AET1Gv20008000 [cytosol] R-ATA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops tauschii AET1Gv20008000 R-ATA-1123150 AET1Gv20008000 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET1Gv20008000 R-ATA-1123150 AET1Gv20008000 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET1Gv20032100 R-ATA-1124935 AET1Gv20032100 [cytosol] R-ATA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119349 S-methylmethionine cycle none Aegilops tauschii AET1Gv20033200 R-ATA-1122373-2 AET1Gv20033200 [cytosol] R-ATA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119304 Putrescine biosynthesis II none Aegilops tauschii AET1Gv20033200 R-ATA-1122373-2 AET1Gv20033200 [cytosol] R-ATA-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119447 Putrescine biosynthesis I none Aegilops tauschii AET1Gv20037600 R-ATA-1123745-2 AET1Gv20037600 [endoplasmic reticulum membrane] R-ATA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119260 Cardiolipin biosynthesis none Aegilops tauschii AET1Gv20037600 R-ATA-1123745-2 AET1Gv20037600 [endoplasmic reticulum membrane] R-ATA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119402 Phospholipid biosynthesis I none Aegilops tauschii AET1Gv20044200 R-ATA-1128613-3 AET1Gv20044200 [cytosol] R-ATA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119316 Phenylpropanoid biosynthesis none Aegilops tauschii AET1Gv20065700 R-ATA-9611477 phospho-phosphorylated-RLCK176 [cytosol] R-ATA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops tauschii AET1Gv20067200 R-ATA-1125648-2 AET1Gv20067200 [cytosol] R-ATA-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119513 Pinobanksin biosynthesis none Aegilops tauschii AET1Gv20067200 R-ATA-1125648-2 AET1Gv20067200 [cytosol] R-ATA-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119531 Flavonoid biosynthesis none Aegilops tauschii AET1Gv20067200 R-ATA-1125648-2 AET1Gv20067200 [cytosol] R-ATA-1119630 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119630 Resveratrol biosynthesis none Aegilops tauschii AET1Gv20067600 R-ATA-9645809-2 AET1Gv20067600 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET1Gv20067600 R-ATA-9645809-2 AET1Gv20067600 [nucleoplasm] R-ATA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675782 Maturation none Aegilops tauschii AET1Gv20067600 R-ATA-9645809-2 AET1Gv20067600 [nucleoplasm] R-ATA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675885 Lagging strand synthesis none Aegilops tauschii AET1Gv20078700 R-ATA-1127804 AET1Gv20078700 [cytosol] R-ATA-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119513 Pinobanksin biosynthesis none Aegilops tauschii AET1Gv20082600 R-ATA-1127614-12 AET1Gv20082600 [cytosol] R-ATA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119261 Salicylate biosynthesis none Aegilops tauschii AET1Gv20082600 R-ATA-1127614-12 AET1Gv20082600 [cytosol] R-ATA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119418 Suberin biosynthesis none Aegilops tauschii AET1Gv20082600 R-ATA-1127614-12 AET1Gv20082600 [cytosol] R-ATA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops tauschii AET1Gv20083100 R-ATA-1127614-8 AET1Gv20083100 [cytosol] R-ATA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119261 Salicylate biosynthesis none Aegilops tauschii AET1Gv20083100 R-ATA-1127614-8 AET1Gv20083100 [cytosol] R-ATA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119418 Suberin biosynthesis none Aegilops tauschii AET1Gv20083100 R-ATA-1127614-8 AET1Gv20083100 [cytosol] R-ATA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops tauschii AET1Gv20083200 R-ATA-1127614-3 AET1Gv20083200 [cytosol] R-ATA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119261 Salicylate biosynthesis none Aegilops tauschii AET1Gv20083200 R-ATA-1127614-3 AET1Gv20083200 [cytosol] R-ATA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119418 Suberin biosynthesis none Aegilops tauschii AET1Gv20083200 R-ATA-1127614-3 AET1Gv20083200 [cytosol] R-ATA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops tauschii AET1Gv20088000 R-ATA-1124742 AET1Gv20088000 [cytosol] R-ATA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119410 Ascorbate biosynthesis none Aegilops tauschii AET1Gv20088000 R-ATA-1124742 AET1Gv20088000 [cytosol] R-ATA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119570 Cytosolic glycolysis none Aegilops tauschii AET1Gv20115100 R-ATA-1128613-5 AET1Gv20115100 [cytosol] R-ATA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119316 Phenylpropanoid biosynthesis none Aegilops tauschii AET1Gv20127900 R-ATA-1123150-2 AET1Gv20127900 [cytosol] R-ATA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops tauschii AET1Gv20127900 R-ATA-1123150-2 AET1Gv20127900 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET1Gv20127900 R-ATA-1123150-2 AET1Gv20127900 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET1Gv20128900 R-ATA-6787241 AET1Gv20128900 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET1Gv20131300 R-ATA-9639217 AET1Gv20131300 [plasma membrane] R-ATA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9639136 Response to Aluminum stress none Aegilops tauschii AET1Gv20145200 R-ATA-9681885 AET1Gv20145200 [Golgi membrane] R-ATA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops tauschii AET1Gv20157500 R-ATA-5654933 AET1Gv20157500 [Golgi lumen] R-ATA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5654909 Xylan biosynthesis none Aegilops tauschii AET1Gv20166100 R-ATA-8986605 AET1Gv20166100 [mitochondrial matrix] R-ATA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119312 Photorespiration none Aegilops tauschii AET1Gv20166100 R-ATA-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-ATA-1119351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119351 Mitochondrial pyruvate metabolism none Aegilops tauschii AET1Gv20166100 R-ATA-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-ATA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119533 TCA cycle (plant) none Aegilops tauschii AET1Gv20167000 R-ATA-9611863 AET1Gv20167000 [mitochondrial matrix] R-ATA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119479 Valine degradation none Aegilops tauschii AET1Gv20178900 R-ATA-1128320 AET1Gv20178900 [cytosol] R-ATA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119389 Phenylalanine biosynthesis I none Aegilops tauschii AET1Gv20178900 R-ATA-1128320 AET1Gv20178900 [cytosol] R-ATA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119400 Methionine biosynthesis II none Aegilops tauschii AET1Gv20178900 R-ATA-1128320 AET1Gv20178900 [cytosol] R-ATA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119506 tyrosine degradation I none Aegilops tauschii AET1Gv20183200 R-ATA-1127481 AET1Gv20183200 [cytosol] R-ATA-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119342 Gamma-glutamyl cycle none Aegilops tauschii AET1Gv20183200 R-ATA-1127481 AET1Gv20183200 [cytosol] R-ATA-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119483 Glutathione biosynthesis none Aegilops tauschii AET1Gv20183500 R-ATA-5138505 AET1Gv20183500 [plastid stroma] R-ATA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119263 Arginine biosynthesis none Aegilops tauschii AET1Gv20183500 R-ATA-5138505 AET1Gv20183500 [plastid stroma] R-ATA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119539 Ornithine biosynthesis none Aegilops tauschii AET1Gv20183500 R-ATA-5138505 AET1Gv20183500 [plastid stroma] R-ATA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119622 Arginine biosynthesis II (acetyl cycle) none Aegilops tauschii AET1Gv20185400 R-ATA-9826705 OSH71 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET1Gv20185800 R-ATA-9826705-2 OSH71 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET1Gv20203800 R-ATA-1122851 AET1Gv20203800 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET1Gv20205100 R-ATA-9826643 AET1Gv20205100 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET1Gv20209300 R-ATA-9645809 AET1Gv20209300 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET1Gv20209300 R-ATA-9645809 AET1Gv20209300 [nucleoplasm] R-ATA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675782 Maturation none Aegilops tauschii AET1Gv20209300 R-ATA-9645809 AET1Gv20209300 [nucleoplasm] R-ATA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675885 Lagging strand synthesis none Aegilops tauschii AET1Gv20217900 R-ATA-5632341 AET1Gv20217900 [cytosol] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET1Gv20217900 R-ATA-5632221 phospho-AET1Gv20217900 [cytosol] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET1Gv20217900 R-ATA-5632170 phospho-AET1Gv20217900 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET1Gv20230700 R-ATA-1129184 AET1Gv20230700 [cytosol] R-ATA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119273 Lysine biosynthesis I none Aegilops tauschii AET1Gv20230700 R-ATA-1129184 AET1Gv20230700 [cytosol] R-ATA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119283 Lysine biosynthesis II none Aegilops tauschii AET1Gv20230700 R-ATA-5606505 AET1Gv20230700 [plastid stroma] R-ATA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119419 Lysine biosynthesis VI none Aegilops tauschii AET1Gv20244800 R-ATA-5608164 AET1Gv20244800 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET1Gv20244800 R-ATA-5608164 AET1Gv20244800 [nucleoplasm] R-ATA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030557 Lateral root initiation none Aegilops tauschii AET1Gv20244800 R-ATA-5608164 AET1Gv20244800 [nucleoplasm] R-ATA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9608575 Reproductive meristem phase change none Aegilops tauschii AET1Gv20244800 R-ATA-9658967 AET1Gv20244800 [cytosol] R-ATA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9608575 Reproductive meristem phase change none Aegilops tauschii AET1Gv20245200 R-ATA-9918268 soluble Starch Synthase (SSIIIA/SSIII-2) [amyloplast] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET1Gv20256300 R-ATA-1127614 AET1Gv20256300 [cytosol] R-ATA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119261 Salicylate biosynthesis none Aegilops tauschii AET1Gv20256300 R-ATA-1127614 AET1Gv20256300 [cytosol] R-ATA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119418 Suberin biosynthesis none Aegilops tauschii AET1Gv20256300 R-ATA-1127614 AET1Gv20256300 [cytosol] R-ATA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops tauschii AET1Gv20265300 R-ATA-9826597 AET1Gv20265300 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET1Gv20281000 R-ATA-1126549 AET1Gv20281000 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET1Gv20286400 R-ATA-1125906 AET1Gv20286400 [cytosol] R-ATA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119276 Choline biosynthesis III none Aegilops tauschii AET1Gv20288400 R-ATA-1130088-2 AET1Gv20288400 [plasma membrane] R-ATA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119314 Cellulose biosynthesis none Aegilops tauschii AET1Gv20293500 R-ATA-8986771 AET1Gv20293500 [plasma membrane] R-ATA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8986768 Anther and pollen development none Aegilops tauschii AET1Gv20296400 R-ATA-1128244-2 AET1Gv20296400 [chloroplast] R-ATA-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119348 Ent-kaurene biosynthesis none Aegilops tauschii AET1Gv20319900 R-ATA-9640786 AET1Gv20319900 [nucleoplasm] R-ATA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640882 Assembly of pre-replication complex none Aegilops tauschii AET1Gv20319900 R-ATA-9640786 AET1Gv20319900 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET1Gv20319900 R-ATA-9640786 AET1Gv20319900 [nucleoplasm] R-ATA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675824 DNA replication Initiation none Aegilops tauschii AET1Gv20357200 R-ATA-1130101 AET1Gv20357200 [amyloplast] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET1Gv20359900 R-ATA-9640698 AET1Gv20359900 [nucleoplasm] R-ATA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640887 G1/S transition none Aegilops tauschii AET1Gv20368300 R-ATA-9826654 AET1Gv20368300 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET1Gv20374300 R-ATA-1129569 AET1Gv20374300 [cytosol] R-ATA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119379 Flavin biosynthesis none Aegilops tauschii AET1Gv20379600 R-ATA-1128528 AET1Gv20379600 [plasma membrane] R-ATA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119314 Cellulose biosynthesis none Aegilops tauschii AET1Gv20383300 R-ATA-9640789 AET1Gv20383300 [nucleoplasm] R-ATA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640760 G1 phase none Aegilops tauschii AET1Gv20392500 R-ATA-1123250 AET1Gv20392500 [cytosol] R-ATA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119265 Tetrahydrofolate biosynthesis I none Aegilops tauschii AET1Gv20392500 R-ATA-1123250 AET1Gv20392500 [cytosol] R-ATA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119523 Tetrahydrofolate biosynthesis II none Aegilops tauschii AET1Gv20399000 R-ATA-5632268 AET1Gv20399000 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET1Gv20406400 R-ATA-5608161 AET1Gv20406400 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET1Gv20411800 R-ATA-9828974 CKX3 [endoplasmic reticulum lumen] R-ATA-9828944 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9828944 Regulation of lemma joint development and leaf angle by cytokinin none Aegilops tauschii AET1Gv20422600 R-ATA-1123250-2 AET1Gv20422600 [cytosol] R-ATA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119265 Tetrahydrofolate biosynthesis I none Aegilops tauschii AET1Gv20422600 R-ATA-1123250-2 AET1Gv20422600 [cytosol] R-ATA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119523 Tetrahydrofolate biosynthesis II none Aegilops tauschii AET1Gv20427500 R-ATA-5608233 AET1Gv20427500 [plasma membrane] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET1Gv20432400 R-ATA-5146758 AET1Gv20432400 [mitochondrial matrix] R-ATA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119533 TCA cycle (plant) none Aegilops tauschii AET1Gv20435600 R-ATA-1124096 AET1Gv20435600 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET1Gv20440800 R-ATA-8879004 AET1Gv20440800 [nucleoplasm] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET1Gv20452600 R-ATA-9675845 AET1Gv20452600 [nucleoplasm] R-ATA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675782 Maturation none Aegilops tauschii AET1Gv20454000 R-ATA-9640731 AET1Gv20454000 [nucleoplasm] R-ATA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640882 Assembly of pre-replication complex none Aegilops tauschii AET1Gv20459100 R-ATA-9618171 AET1Gv20459100 [plasma membrane] R-ATA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9618218 Arsenic uptake and detoxification none Aegilops tauschii AET1Gv20460600 R-ATA-1128613 AET1Gv20460600 [cytosol] R-ATA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119316 Phenylpropanoid biosynthesis none Aegilops tauschii AET1Gv20469500 R-ATA-8987535-2 AET1Gv20469500 [chloroplast] R-ATA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119312 Photorespiration none Aegilops tauschii AET1Gv20476600 R-ATA-1124788 AET1Gv20476600 [cytosol] R-ATA-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119601 Trehalose degradation II none Aegilops tauschii AET1Gv20482000 R-ATA-1127490 AET1Gv20482000 [cytosol] R-ATA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119389 Phenylalanine biosynthesis I none Aegilops tauschii AET1Gv20483200 R-ATA-1122830 AET1Gv20483200 [cytosol] R-ATA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119276 Choline biosynthesis III none Aegilops tauschii AET1Gv20488700 R-ATA-6788007 AET1Gv20488700 [cytosol] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET1Gv20490500 R-ATA-1129600-2 AET1Gv20490500 [cytosol] R-ATA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119407 Ureide biosynthesis none Aegilops tauschii AET1Gv20493500 R-ATA-5632319 phospho-AET1Gv20493500 [plasma membrane] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET1Gv20502800 R-ATA-6787119 AET1Gv20502800 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET1Gv20505300 R-ATA-9638999 AET1Gv20505300 [cytosol] R-ATA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119434 Phytic acid biosynthesis (lipid-independent) none Aegilops tauschii AET1Gv20506700 R-ATA-1122783 AET1Gv20506700 [chloroplast stroma] R-ATA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119402 Phospholipid biosynthesis I none Aegilops tauschii AET1Gv20507700 R-ATA-1127989 AET1Gv20507700 [plastid stroma] R-ATA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119430 Chorismate biosynthesis none Aegilops tauschii AET1Gv20508400 R-ATA-1127398 AET1Gv20508400 [plasma membrane] R-ATA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119314 Cellulose biosynthesis none Aegilops tauschii AET1Gv20508400 R-ATA-1127398 AET1Gv20508400 [plasma membrane] R-ATA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9639861 Development of root hair none Aegilops tauschii AET1Gv20521600 R-ATA-5632250 phospho-AET1Gv20521600 [plasma membrane] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET1Gv20521800 R-ATA-1127087 AET1Gv20521800 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET1Gv20523100 R-ATA-1127899-2 AET1Gv20523100 [cytosol] R-ATA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119370 Sterol biosynthesis none Aegilops tauschii AET1Gv20526800 R-ATA-4754220 AET1Gv20526800 [plastid stroma] R-ATA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119449 Carotenoid biosynthesis none Aegilops tauschii AET1Gv20526800 R-ATA-1126847 AET1Gv20526800 [cytosol] R-ATA-1119492 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119492 Lactucaxanthin biosynthesis none Aegilops tauschii AET1Gv20529100 R-ATA-1122593 AET1Gv20529100 [cytosol] R-ATA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119436 Peptidoglycan biosynthesis I none Aegilops tauschii AET1Gv20529100 R-ATA-1122593 AET1Gv20529100 [cytosol] R-ATA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119523 Tetrahydrofolate biosynthesis II none Aegilops tauschii AET1Gv20529100 R-ATA-1122593 AET1Gv20529100 [cytosol] R-ATA-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119617 Folate polyglutamylation I none Aegilops tauschii AET1Gv20529200 R-ATA-1123757 AET1Gv20529200 [cytosol] R-ATA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119460 Isoleucine biosynthesis from threonine none Aegilops tauschii AET1Gv20529200 R-ATA-1123757 AET1Gv20529200 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET1Gv20529200 R-ATA-1123757 AET1Gv20529200 [cytosol] R-ATA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119496 Pantothenate biosynthesis I none Aegilops tauschii AET1Gv20529200 R-ATA-1123757 AET1Gv20529200 [cytosol] R-ATA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119540 Leucine biosynthesis none Aegilops tauschii AET1Gv20529200 R-ATA-1123757 AET1Gv20529200 [cytosol] R-ATA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119544 Pantothenate biosynthesis II none Aegilops tauschii AET1Gv20530300 R-ATA-1130416 AET1Gv20530300 [mitochondrial matrix] R-ATA-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119337 Proline degradation none Aegilops tauschii AET1Gv20530300 R-ATA-1130416 AET1Gv20530300 [mitochondrial matrix] R-ATA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119495 Citrulline biosynthesis none Aegilops tauschii AET1Gv20532500 R-ATA-1128054 AET1Gv20532500 [mitochondrial matrix] R-ATA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119479 Valine degradation none Aegilops tauschii AET1Gv20532600 R-ATA-1125569 AET1Gv20532600 [cytosol] R-ATA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119516 Trehalose biosynthesis I none Aegilops tauschii AET1Gv20541700 R-ATA-1124078 AET1Gv20541700 [plastid stroma] R-ATA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119430 Chorismate biosynthesis none Aegilops tauschii AET1Gv20543100 R-ATA-8933728 AET1Gv20543100 [nucleoplasm] R-ATA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8933811 Circadian rhythm none Aegilops tauschii AET1Gv20544600 R-ATA-1128380 AET1Gv20544600 [plastid stroma] R-ATA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119430 Chorismate biosynthesis none Aegilops tauschii AET1Gv20547800 R-ATA-9930313 AET1Gv20547800 [nucleoplasm] R-ATA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9766881 TF network involved in salinity response none Aegilops tauschii AET1Gv20557800 R-ATA-1124190 AET1Gv20557800 [plastid stroma] R-ATA-1119412 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119412 Chlorophyll a biosynthesis I none Aegilops tauschii AET1Gv20566700 R-ATA-9826699 AET1Gv20566700 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET1Gv20581600 R-ATA-1124657 AET1Gv20581600 [cytosol] R-ATA-1119595 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119595 Mannose degradation none Aegilops tauschii AET1Gv20581600 R-ATA-1124657 AET1Gv20581600 [cytosol] R-ATA-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119601 Trehalose degradation II none Aegilops tauschii AET1Gv20581600 R-ATA-1124657 AET1Gv20581600 [cytosol] R-ATA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119628 GDP-mannose metabolism none Aegilops tauschii AET1Gv20582900 R-ATA-1125521 AET1Gv20582900 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET1Gv20590600 R-ATA-8879034 HVA1 homolog [vacuolar lumen] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET1Gv20591800 R-ATA-9675464 AET1Gv20591800 [nucleoplasm] R-ATA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030654 Primary root development none Aegilops tauschii AET1Gv20598500 R-ATA-5138489 AET1Gv20598500 [plastid stroma] R-ATA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119263 Arginine biosynthesis none Aegilops tauschii AET1Gv20598500 R-ATA-1127893 AET1Gv20598500 [cytosol] R-ATA-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119444 Canavanine biosynthesis none Aegilops tauschii AET1Gv20598500 R-ATA-5138489 AET1Gv20598500 [plastid stroma] R-ATA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119622 Arginine biosynthesis II (acetyl cycle) none Aegilops tauschii AET1Gv20598500 R-ATA-5138489 AET1Gv20598500 [plastid stroma] R-ATA-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5633340 Citrulline-nitric oxide cycle none Aegilops tauschii AET1Gv20601800 R-ATA-9918267 ISA2 [amyloplast] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET1Gv20618500 R-ATA-5679398 AET1Gv20618500 [cytosol] R-ATA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5679411 Gibberellin signaling none Aegilops tauschii AET1Gv20620300 R-ATA-4723654 AET1Gv20620300 [plastid stroma] R-ATA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119464 Methylerythritol phosphate pathway none Aegilops tauschii AET1Gv20620300 R-ATA-1130030 AET1Gv20620300 [cytosol] R-ATA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119594 Pyridoxal 5'-phosphate biosynthesis none Aegilops tauschii AET1Gv20620300 R-ATA-1130030 AET1Gv20620300 [cytosol] R-ATA-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119629 Thiamine biosynthesis none Aegilops tauschii AET1Gv20628300 R-ATA-1127916 AET1Gv20628300 [plastid stroma] R-ATA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119367 Polyisoprenoid biosynthesis none Aegilops tauschii AET1Gv20628300 R-ATA-1127916 AET1Gv20628300 [plastid stroma] R-ATA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119615 Mevalonate pathway none Aegilops tauschii AET1Gv20640300 R-ATA-9640753 AET1Gv20640300 [nucleoplasm] R-ATA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640882 Assembly of pre-replication complex none Aegilops tauschii AET1Gv20640300 R-ATA-9640753 AET1Gv20640300 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET1Gv20640300 R-ATA-9640753 AET1Gv20640300 [nucleoplasm] R-ATA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675824 DNA replication Initiation none Aegilops tauschii AET1Gv20648700 R-ATA-1123717 AET1Gv20648700 [cytosol] R-ATA-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119395 Maackiain biosynthesis none Aegilops tauschii AET1Gv20648700 R-ATA-1123717 AET1Gv20648700 [cytosol] R-ATA-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119453 Medicarpin biosynthesis none Aegilops tauschii AET1Gv20651600 R-ATA-5654756 AET1Gv20651600 [cytosol] R-ATA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119281 Aspartate biosynthesis I none Aegilops tauschii AET1Gv20651600 R-ATA-1123648 AET1Gv20651600 [plastid] R-ATA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119506 tyrosine degradation I none Aegilops tauschii AET1Gv20651600 R-ATA-5631992 AET1Gv20651600 [plastid stroma] R-ATA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119553 Asparagine biosynthesis none Aegilops tauschii AET1Gv20662800 R-ATA-9930249 AET1Gv20662800 [nucleoplasm] R-ATA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9766881 TF network involved in salinity response none Aegilops tauschii AET1Gv20664600 R-ATA-6788154 AET1Gv20664600 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET1Gv20670000 R-ATA-6787071 AET1Gv20670000 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET1Gv20674500 R-ATA-9675849 AET1Gv20674500 [nucleoplasm] R-ATA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675824 DNA replication Initiation none Aegilops tauschii AET1Gv20675900 R-ATA-1127913 AET1Gv20675900 [cytosol] R-ATA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119495 Citrulline biosynthesis none Aegilops tauschii AET1Gv20675900 R-ATA-1127913 AET1Gv20675900 [cytosol] R-ATA-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119631 Proline biosynthesis I none Aegilops tauschii AET1Gv20682700 R-ATA-1126172 AET1Gv20682700 [cytosol] R-ATA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119379 Flavin biosynthesis none Aegilops tauschii AET1Gv20709800 R-ATA-9826697 AET1Gv20709800 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET1Gv20711500 R-ATA-1129539 AET1Gv20711500 [cytosol] R-ATA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119610 Biotin biosynthesis II none Aegilops tauschii AET1Gv20713100 R-ATA-9640767 AET1Gv20713100 [nucleoplasm] R-ATA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640882 Assembly of pre-replication complex none Aegilops tauschii AET1Gv20713100 R-ATA-9640767 AET1Gv20713100 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET1Gv20713100 R-ATA-9640767 AET1Gv20713100 [nucleoplasm] R-ATA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675824 DNA replication Initiation none Aegilops tauschii AET1Gv20720700 R-ATA-9924543 CYP714D1/EUI1 [endoplasmic reticulum membrane] R-ATA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Aegilops tauschii AET1Gv20720900 R-ATA-9924543-2 CYP714D1/EUI1 [endoplasmic reticulum membrane] R-ATA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Aegilops tauschii AET1Gv20724100 R-ATA-9639088 AET1Gv20724100 [plasma membrane] R-ATA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9639136 Response to Aluminum stress none Aegilops tauschii AET1Gv20734400 R-ATA-1126996-3 AET1Gv20734400 [cytosol] R-ATA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119316 Phenylpropanoid biosynthesis none Aegilops tauschii AET1Gv20734800 R-ATA-9916302 AET1Gv20734800 [nucleoplasm] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET1Gv20736400 R-ATA-9681928 AET1Gv20736400 [Golgi membrane] R-ATA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops tauschii AET1Gv20740800 R-ATA-9930304 ACA7 [plasma membrane] R-ATA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9766881 TF network involved in salinity response none Aegilops tauschii AET1Gv20740900 R-ATA-9025317 AET1Gv20740900 [cytosol] R-ATA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119402 Phospholipid biosynthesis I none Aegilops tauschii AET1Gv20750400 R-ATA-9916179 OsC3H36 [nucleoplasm] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET1Gv20766500 R-ATA-1129208 AET1Gv20766500 [chloroplast envelope] R-ATA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119402 Phospholipid biosynthesis I none Aegilops tauschii AET1Gv20794600 R-ATA-6787093-2 AET1Gv20794600 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET1Gv20794700 R-ATA-6787093-4 AET1Gv20794700 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET1Gv20796300 R-ATA-1128973 AET1Gv20796300 [cytosol] R-ATA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops tauschii AET1Gv20796300 R-ATA-1128973 AET1Gv20796300 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET1Gv20796300 R-ATA-1128973 AET1Gv20796300 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET1Gv20802600 R-ATA-9826682 AET1Gv20802600 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET1Gv20806400 R-ATA-5608130 AET1Gv20806400 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET1Gv20812500 R-ATA-1123733 AET1Gv20812500 [cytosol] R-ATA-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119484 Folate polyglutamylation II none Aegilops tauschii AET1Gv20813800 R-ATA-1126560 AET1Gv20813800 [cytosol] R-ATA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119516 Trehalose biosynthesis I none Aegilops tauschii AET1Gv20821300 R-ATA-1125997 AET1Gv20821300 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET1Gv20830200 R-ATA-9607071 AET1Gv20830200 [mitochondrion] R-ATA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9607185 Generation of superoxide radicals none Aegilops tauschii AET1Gv20830400 R-ATA-9675860-2 AET1Gv20830400 [nucleoplasm] R-ATA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675824 DNA replication Initiation none Aegilops tauschii AET1Gv20853600 R-ATA-1122560 AET1Gv20853600 [cytosol] R-ATA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119331 Cysteine biosynthesis I none Aegilops tauschii AET1Gv20853900 R-ATA-1129175 AET1Gv20853900 [amyloplast] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET1Gv20859600 R-ATA-9609608-12 AET1Gv20859600 [cytosol] R-ATA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609573 Tricin biosynthesis none Aegilops tauschii AET1Gv20859600 R-ATA-9916171-12 OsOMT [cytosol] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET1Gv20859600 R-ATA-9916312-12 OsOMT [nucleoplasm] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET1Gv20862800 R-ATA-8854108 AET1Gv20862800 [cytosol] R-ATA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119556 Choline biosynthesis I none Aegilops tauschii AET1Gv20866100 R-ATA-1124037 AET1Gv20866100 [mitochondrial matrix] R-ATA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119289 Arginine degradation none Aegilops tauschii AET1Gv20867000 R-ATA-4415101 AET1Gv20867000 [cytosol] R-ATA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-3899351 Abscisic acid (ABA) mediated signaling none Aegilops tauschii AET1Gv20871000 R-ATA-9675857 AET1Gv20871000 [nucleoplasm] R-ATA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675782 Maturation none Aegilops tauschii AET1Gv20872300 R-ATA-1127346-2 AET1Gv20872300 [cytosol] R-ATA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119316 Phenylpropanoid biosynthesis none Aegilops tauschii AET1Gv20876800 R-ATA-9920284 AET1Gv20876800 [nucleoplasm] R-ATA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934108 Short day regulated expression of florigens none Aegilops tauschii AET1Gv20878900 R-ATA-8879034-2 HVA1 homolog [vacuolar lumen] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET1Gv20879300 R-ATA-8879034-4 HVA1 homolog [vacuolar lumen] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET1Gv20879400 R-ATA-8879034-3 HVA1 homolog [vacuolar lumen] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET1Gv20889100 R-ATA-8854127 AET1Gv20889100 [cytosol] R-ATA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119556 Choline biosynthesis I none Aegilops tauschii AET1Gv20890000 R-ATA-1122242-2 AET1Gv20890000 [cytosol] R-ATA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119267 Phenylalanine degradation III none Aegilops tauschii AET1Gv20896400 R-ATA-1123935 AET1Gv20896400 [cytosol] R-ATA-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119262 Threonine biosynthesis from homoserine none Aegilops tauschii AET1Gv20899000 R-ATA-1125532 AET1Gv20899000 [cytosol] R-ATA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119276 Choline biosynthesis III none Aegilops tauschii AET1Gv20911600 R-ATA-9826667 AET1Gv20911600 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET1Gv20917400 R-ATA-9025372 AET1Gv20917400 [endoplasmic reticulum membrane] R-ATA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119402 Phospholipid biosynthesis I none Aegilops tauschii AET1Gv20919800 R-ATA-1122351 AET1Gv20919800 [cytosol] R-ATA-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119354 Asparagine biosynthesis III none Aegilops tauschii AET1Gv20919800 R-ATA-5633281 AET1Gv20919800 [cytosol] R-ATA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119495 Citrulline biosynthesis none Aegilops tauschii AET1Gv20919800 R-ATA-1122351 AET1Gv20919800 [cytosol] R-ATA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119553 Asparagine biosynthesis none Aegilops tauschii AET1Gv20922700 R-ATA-9675820 AET1Gv20922700 [nucleoplasm] R-ATA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675824 DNA replication Initiation none Aegilops tauschii AET1Gv20922800 R-ATA-4723663-2 AET1Gv20922800 [plastid stroma] R-ATA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119464 Methylerythritol phosphate pathway none Aegilops tauschii AET1Gv20922800 R-ATA-1126491-2 AET1Gv20922800 [cytosol] R-ATA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119594 Pyridoxal 5'-phosphate biosynthesis none Aegilops tauschii AET1Gv20922800 R-ATA-1126491-2 AET1Gv20922800 [cytosol] R-ATA-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119629 Thiamine biosynthesis none Aegilops tauschii AET1Gv20937200 R-ATA-6786999 AET1Gv20937200 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET1Gv20939400 R-ATA-1128214 AET1Gv20939400 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET1Gv20940700 R-ATA-5654957 AET1Gv20940700 [Golgi lumen] R-ATA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5654909 Xylan biosynthesis none Aegilops tauschii AET1Gv20945500 R-ATA-1129926 AET1Gv20945500 [cytosol] R-ATA-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Aegilops tauschii AET1Gv20950700 R-ATA-5608184 AET1Gv20950700 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET1Gv20961200 R-ATA-9682506 AET1Gv20961200 [cytosol] R-ATA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119410 Ascorbate biosynthesis none Aegilops tauschii AET1Gv20976800 R-ATA-8933788 AET1Gv20976800 [nucleoplasm] R-ATA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8933811 Circadian rhythm none Aegilops tauschii AET1Gv20981300 R-ATA-1126157 AET1Gv20981300 [cytosol] R-ATA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119460 Isoleucine biosynthesis from threonine none Aegilops tauschii AET1Gv20981300 R-ATA-1126157 AET1Gv20981300 [cytosol] R-ATA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119600 Valine biosynthesis none Aegilops tauschii AET1Gv20982300 R-ATA-1128961 AET1Gv20982300 [mitochondrial matrix] R-ATA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119533 TCA cycle (plant) none Aegilops tauschii AET1Gv20987500 R-ATA-1126713 AET1Gv20987500 [endosome] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET1Gv20987500 R-ATA-5679319 AET1Gv20987500 [plasma membrane] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET1Gv20988500 R-ATA-1127922 AET1Gv20988500 [cytosol] R-ATA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119370 Sterol biosynthesis none Aegilops tauschii AET1Gv20991000 R-ATA-1127414 AET1Gv20991000 [cytosol] R-ATA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119265 Tetrahydrofolate biosynthesis I none Aegilops tauschii AET1Gv20995100 R-ATA-1127562 AET1Gv20995100 [amyloplast] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET1Gv20998300 R-ATA-1123482 AET1Gv20998300 [plastid stroma] R-ATA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119367 Polyisoprenoid biosynthesis none Aegilops tauschii AET1Gv21000200 R-ATA-1122351-2 AET1Gv21000200 [cytosol] R-ATA-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119354 Asparagine biosynthesis III none Aegilops tauschii AET1Gv21000200 R-ATA-5633281-2 AET1Gv21000200 [cytosol] R-ATA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119495 Citrulline biosynthesis none Aegilops tauschii AET1Gv21000200 R-ATA-1122351-2 AET1Gv21000200 [cytosol] R-ATA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119553 Asparagine biosynthesis none Aegilops tauschii AET1Gv21008600 R-ATA-6787184 AET1Gv21008600 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET1Gv21015900 R-ATA-1128354 AET1Gv21015900 [chloroplast] R-ATA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119494 Tryptophan biosynthesis none Aegilops tauschii AET1Gv21039300 R-ATA-3899348 AET1Gv21039300 [cytosol] R-ATA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-3899351 Abscisic acid (ABA) mediated signaling none Aegilops tauschii AET1Gv21039300 R-ATA-3899348 AET1Gv21039300 [cytosol] R-ATA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9639861 Development of root hair none Aegilops tauschii AET1Gv21041800 R-ATA-1124404 AET1Gv21041800 [cytosol] R-ATA-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119322 Leucodelphinidin biosynthesis none Aegilops tauschii AET1Gv21041800 R-ATA-1124404 AET1Gv21041800 [cytosol] R-ATA-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Aegilops tauschii AET1Gv21045100 R-ATA-8933860 AET1Gv21045100 [nucleoplasm] R-ATA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8933811 Circadian rhythm none Aegilops tauschii AET1Gv21045100 R-ATA-8933860 AET1Gv21045100 [nucleoplasm] R-ATA-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9928946 Drought escape (DE) via ABA-independent pathway none Aegilops tauschii AET1Gv21045700 R-ATA-1123746 AET1Gv21045700 [cytosol] R-ATA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119586 Cyanate degradation none Aegilops tauschii AET2Gv20002400 R-ATA-1127614-5 AET2Gv20002400 [cytosol] R-ATA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119261 Salicylate biosynthesis none Aegilops tauschii AET2Gv20002400 R-ATA-1127614-5 AET2Gv20002400 [cytosol] R-ATA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119418 Suberin biosynthesis none Aegilops tauschii AET2Gv20002400 R-ATA-1127614-5 AET2Gv20002400 [cytosol] R-ATA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops tauschii AET2Gv20012500 R-ATA-1123465 AET2Gv20012500 [plastid stroma] R-ATA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119424 Plastid glycolysis none Aegilops tauschii AET2Gv20012500 R-ATA-5633368 AET2Gv20012500 [cytosol] R-ATA-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119601 Trehalose degradation II none Aegilops tauschii AET2Gv20016100 R-ATA-1129078-2 AET2Gv20016100 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET2Gv20021700 R-ATA-6787056 AET2Gv20021700 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET2Gv20029600 R-ATA-8879085-3 AET2Gv20029600 [nucleoplasm] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET2Gv20040600 R-ATA-9640782 AET2Gv20040600 [nucleoplasm] R-ATA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640882 Assembly of pre-replication complex none Aegilops tauschii AET2Gv20047600 R-ATA-1126354-3 AET2Gv20047600 [cytosol] R-ATA-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119531 Flavonoid biosynthesis none Aegilops tauschii AET2Gv20050000 R-ATA-1129559-5 AET2Gv20050000 [plastid stroma] R-ATA-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119308 Momilactone biosynthesis none Aegilops tauschii AET2Gv20050100 R-ATA-1129559-4 AET2Gv20050100 [plastid stroma] R-ATA-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119308 Momilactone biosynthesis none Aegilops tauschii AET2Gv20050300 R-ATA-1129559-3 AET2Gv20050300 [plastid stroma] R-ATA-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119308 Momilactone biosynthesis none Aegilops tauschii AET2Gv20050400 R-ATA-1129559 AET2Gv20050400 [plastid stroma] R-ATA-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119308 Momilactone biosynthesis none Aegilops tauschii AET2Gv20050500 R-ATA-1123662 AET2Gv20050500 [plastid stroma] R-ATA-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119308 Momilactone biosynthesis none Aegilops tauschii AET2Gv20050600 R-ATA-1123662-2 AET2Gv20050600 [plastid stroma] R-ATA-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119308 Momilactone biosynthesis none Aegilops tauschii AET2Gv20052300 R-ATA-9640718 AET2Gv20052300 [nucleoplasm] R-ATA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640887 G1/S transition none Aegilops tauschii AET2Gv20052600 R-ATA-1126344 AET2Gv20052600 [plastid stroma] R-ATA-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119529 Sulfate activation for sulfonation none Aegilops tauschii AET2Gv20055500 R-ATA-8986863 AET2Gv20055500 [plasma membrane] R-ATA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8986768 Anther and pollen development none Aegilops tauschii AET2Gv20056200 R-ATA-1126354 AET2Gv20056200 [cytosol] R-ATA-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119531 Flavonoid biosynthesis none Aegilops tauschii AET2Gv20056600 R-ATA-5631969 AET2Gv20056600 [mitochondrial matrix] R-ATA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119289 Arginine degradation none Aegilops tauschii AET2Gv20056600 R-ATA-5633275 AET2Gv20056600 [cytosol] R-ATA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119495 Citrulline biosynthesis none Aegilops tauschii AET2Gv20057300 R-ATA-1126998-2 AET2Gv20057300 [cytosol] R-ATA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119615 Mevalonate pathway none Aegilops tauschii AET2Gv20057900 R-ATA-1126636-2 AET2Gv20057900 [cytosol] R-ATA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119370 Sterol biosynthesis none Aegilops tauschii AET2Gv20058600 R-ATA-1126636-8 AET2Gv20058600 [cytosol] R-ATA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119370 Sterol biosynthesis none Aegilops tauschii AET2Gv20064600 R-ATA-5654942 AET2Gv20064600 [Golgi lumen] R-ATA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5654909 Xylan biosynthesis none Aegilops tauschii AET2Gv20065800 R-ATA-1128606 AET2Gv20065800 [mitochondrial matrix] R-ATA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119365 Lysine degradation II none Aegilops tauschii AET2Gv20065800 R-ATA-1173244 AET2Gv20065800 [mitochondrial matrix] R-ATA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119533 TCA cycle (plant) none Aegilops tauschii AET2Gv20070000 R-ATA-1124164-3 AET2Gv20070000 [cytosol] R-ATA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119334 Ethylene biosynthesis from methionine none Aegilops tauschii AET2Gv20070000 R-ATA-1124164-3 AET2Gv20070000 [cytosol] R-ATA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119501 S-adenosyl-L-methionine cycle none Aegilops tauschii AET2Gv20070000 R-ATA-1124164-3 AET2Gv20070000 [cytosol] R-ATA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119624 Methionine salvage pathway none Aegilops tauschii AET2Gv20070000 R-ATA-9025764-3 AET2Gv20070000 [cytosol] R-ATA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9025754 Mugineic acid biosynthesis none Aegilops tauschii AET2Gv20071900 R-ATA-9609569 AET2Gv20071900 [cytosol] R-ATA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609573 Tricin biosynthesis none Aegilops tauschii AET2Gv20080300 R-ATA-6786904-2 AET2Gv20080300 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET2Gv20082500 R-ATA-9025712-2 AET2Gv20082500 [cytosol] R-ATA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9025754 Mugineic acid biosynthesis none Aegilops tauschii AET2Gv20088600 R-ATA-9609608-5 AET2Gv20088600 [cytosol] R-ATA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609573 Tricin biosynthesis none Aegilops tauschii AET2Gv20088600 R-ATA-9916171-5 OsOMT [cytosol] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET2Gv20088600 R-ATA-9916312-5 OsOMT [nucleoplasm] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET2Gv20123000 R-ATA-9618112 AET2Gv20123000 [plasma membrane] R-ATA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9618218 Arsenic uptake and detoxification none Aegilops tauschii AET2Gv20124700 R-ATA-8987531 AET2Gv20124700 [chloroplast] R-ATA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119312 Photorespiration none Aegilops tauschii AET2Gv20124700 R-ATA-1125951-3 AET2Gv20124700 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET2Gv20132500 R-ATA-1125631 AET2Gv20132500 [cytosol] R-ATA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119321 Glycerol degradation I none Aegilops tauschii AET2Gv20133900 R-ATA-1122373 AET2Gv20133900 [cytosol] R-ATA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119304 Putrescine biosynthesis II none Aegilops tauschii AET2Gv20133900 R-ATA-1122373 AET2Gv20133900 [cytosol] R-ATA-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119447 Putrescine biosynthesis I none Aegilops tauschii AET2Gv20141000 R-ATA-5367725 AET2Gv20141000 [plastid stroma] R-ATA-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5367729 Strigolactone biosynthesis none Aegilops tauschii AET2Gv20141500 R-ATA-1127509 AET2Gv20141500 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET2Gv20142300 R-ATA-2685737 AET2Gv20142300 [cytosol] R-ATA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119580 IAA biosynthesis II none Aegilops tauschii AET2Gv20144200 R-ATA-1127257-3 AET2Gv20144200 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET2Gv20144600 R-ATA-1127257-2 AET2Gv20144600 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET2Gv20144700 R-ATA-1127257 AET2Gv20144700 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET2Gv20147000 R-ATA-1129818 AET2Gv20147000 [mitochondrial matrix] R-ATA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119365 Lysine degradation II none Aegilops tauschii AET2Gv20147000 R-ATA-1173242 AET2Gv20147000 [mitochondrial matrix] R-ATA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119533 TCA cycle (plant) none Aegilops tauschii AET2Gv20151400 R-ATA-8933718 AET2Gv20151400 [nucleoplasm] R-ATA-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9928946 Drought escape (DE) via ABA-independent pathway none Aegilops tauschii AET2Gv20152300 R-ATA-1126883 AET2Gv20152300 [cytosol] R-ATA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119389 Phenylalanine biosynthesis I none Aegilops tauschii AET2Gv20158000 R-ATA-1129616 AET2Gv20158000 [cytosol] R-ATA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119300 Glycolipid desaturation none Aegilops tauschii AET2Gv20165500 R-ATA-9025290-2 AET2Gv20165500 [cytosol] R-ATA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119267 Phenylalanine degradation III none Aegilops tauschii AET2Gv20165500 R-ATA-1127774-2 AET2Gv20165500 [cytosol] R-ATA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119460 Isoleucine biosynthesis from threonine none Aegilops tauschii AET2Gv20165500 R-ATA-1127774-2 AET2Gv20165500 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET2Gv20165500 R-ATA-1127774-2 AET2Gv20165500 [cytosol] R-ATA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119600 Valine biosynthesis none Aegilops tauschii AET2Gv20165700 R-ATA-9025290 AET2Gv20165700 [cytosol] R-ATA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119267 Phenylalanine degradation III none Aegilops tauschii AET2Gv20165700 R-ATA-1127774 AET2Gv20165700 [cytosol] R-ATA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119460 Isoleucine biosynthesis from threonine none Aegilops tauschii AET2Gv20165700 R-ATA-1127774 AET2Gv20165700 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET2Gv20165700 R-ATA-1127774 AET2Gv20165700 [cytosol] R-ATA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119600 Valine biosynthesis none Aegilops tauschii AET2Gv20173200 R-ATA-6787254 AET2Gv20173200 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET2Gv20173200 R-ATA-6787112 AET2Gv20173200 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET2Gv20178300 R-ATA-1124234 AET2Gv20178300 [cytosol] R-ATA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119436 Peptidoglycan biosynthesis I none Aegilops tauschii AET2Gv20187500 R-ATA-9025758 AET2Gv20187500 [cytosol] R-ATA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9025754 Mugineic acid biosynthesis none Aegilops tauschii AET2Gv20189400 R-ATA-8986863-2 AET2Gv20189400 [plasma membrane] R-ATA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8986768 Anther and pollen development none Aegilops tauschii AET2Gv20195300 R-ATA-6788050 AET2Gv20195300 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET2Gv20196400 R-ATA-9927865 AET2Gv20196400 [nucleoplasm] R-ATA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934257 Transition from vegetative to reproductive shoot apical meristem none Aegilops tauschii AET2Gv20197000 R-ATA-1127527 AET2Gv20197000 [cytosol] R-ATA-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Aegilops tauschii AET2Gv20198000 R-ATA-6787254-2 AET2Gv20198000 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET2Gv20198000 R-ATA-6787112-2 AET2Gv20198000 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET2Gv20200400 R-ATA-6787018 AET2Gv20200400 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET2Gv20206800 R-ATA-1123087 AET2Gv20206800 [plasma membrane] R-ATA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119314 Cellulose biosynthesis none Aegilops tauschii AET2Gv20220500 R-ATA-9826657 AET2Gv20220500 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET2Gv20225400 R-ATA-1127467 AET2Gv20225400 [cytosol] R-ATA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119456 Brassinosteroid biosynthesis II none Aegilops tauschii AET2Gv20233200 R-ATA-1123477 AET2Gv20233200 [cytosol] R-ATA-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119451 Xylose degradation none Aegilops tauschii AET2Gv20239500 R-ATA-8934069 AET2Gv20239500 [nucleoplasm] R-ATA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934036 Long day regulated expression of florigens none Aegilops tauschii AET2Gv20239500 R-ATA-8934069 AET2Gv20239500 [nucleoplasm] R-ATA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934108 Short day regulated expression of florigens none Aegilops tauschii AET2Gv20245100 R-ATA-1124206 AET2Gv20245100 [cytosol] R-ATA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119403 Removal of superoxide radicals none Aegilops tauschii AET2Gv20245100 R-ATA-1124206 AET2Gv20245100 [cytosol] R-ATA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops tauschii AET2Gv20248600 R-ATA-1127820 AET2Gv20248600 [plasma membrane] R-ATA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119314 Cellulose biosynthesis none Aegilops tauschii AET2Gv20254900 R-ATA-1129311 AET2Gv20254900 [cytosol] R-ATA-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Aegilops tauschii AET2Gv20260800 R-ATA-5603891 AET2Gv20260800 [plastid stroma] R-ATA-1119420 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119420 Glutamate biosynthesis V none Aegilops tauschii AET2Gv20260800 R-ATA-1125410 AET2Gv20260800 [chloroplast stroma] R-ATA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119443 Ammonia assimilation cycle none Aegilops tauschii AET2Gv20262200 R-ATA-9611465 AET2Gv20262200 [nucleoplasm] R-ATA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops tauschii AET2Gv20262200 R-ATA-9611445 AET2Gv20262200 [nucleoplasm] R-ATA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops tauschii AET2Gv20301300 R-ATA-1130302 AET2Gv20301300 [cytosol] R-ATA-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119451 Xylose degradation none Aegilops tauschii AET2Gv20326900 R-ATA-9640752 AET2Gv20326900 [nucleoplasm] R-ATA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640882 Assembly of pre-replication complex none Aegilops tauschii AET2Gv20326900 R-ATA-9640752 AET2Gv20326900 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET2Gv20329000 R-ATA-9025443 AET2Gv20329000 [endoplasmic reticulum membrane] R-ATA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119325 Sphingolipid metabolism none Aegilops tauschii AET2Gv20334900 R-ATA-6786934 AET2Gv20334900 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET2Gv20339100 R-ATA-1122845 AET2Gv20339100 [plastid stroma] R-ATA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119430 Chorismate biosynthesis none Aegilops tauschii AET2Gv20347200 R-ATA-1129585 AET2Gv20347200 [cytosol] R-ATA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119265 Tetrahydrofolate biosynthesis I none Aegilops tauschii AET2Gv20347200 R-ATA-1129585 AET2Gv20347200 [cytosol] R-ATA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119523 Tetrahydrofolate biosynthesis II none Aegilops tauschii AET2Gv20350000 R-ATA-1129561 AET2Gv20350000 [cytosol] R-ATA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119452 Galactose degradation II none Aegilops tauschii AET2Gv20350000 R-ATA-1129561 AET2Gv20350000 [cytosol] R-ATA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119465 Sucrose biosynthesis none Aegilops tauschii AET2Gv20350900 R-ATA-8987499-2 AET2Gv20350900 [peroxisomal matrix] R-ATA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119312 Photorespiration none Aegilops tauschii AET2Gv20350900 R-ATA-1130222-2 AET2Gv20350900 [cytosol] R-ATA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119596 Glutamate biosynthesis I none Aegilops tauschii AET2Gv20352600 R-ATA-5679443 AET2Gv20352600 [nucleoplasm] R-ATA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5679411 Gibberellin signaling none Aegilops tauschii AET2Gv20352600 R-ATA-5679443 AET2Gv20352600 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET2Gv20352600 R-ATA-6787090 AET2Gv20352600 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET2Gv20354800 R-ATA-1123534 AET2Gv20354800 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET2Gv20363600 R-ATA-9681895 AET2Gv20363600 [Golgi membrane] R-ATA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops tauschii AET2Gv20367600 R-ATA-6787141 AET2Gv20367600 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET2Gv20381700 R-ATA-6788084 AET2Gv20381700 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET2Gv20382200 R-ATA-1123819 AET2Gv20382200 [plastid stroma] R-ATA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119464 Methylerythritol phosphate pathway none Aegilops tauschii AET2Gv20403100 R-ATA-5632334 AET2Gv20403100 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET2Gv20403100 R-ATA-5632197 phospho-AET2Gv20403100 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET2Gv20403100 R-ATA-5632183 phospho-AET2Gv20403100 [cytosol] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET2Gv20403100 R-ATA-5632334 AET2Gv20403100 [nucleoplasm] R-ATA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5679411 Gibberellin signaling none Aegilops tauschii AET2Gv20404500 R-ATA-1125237 AET2Gv20404500 [mitochondrial matrix] R-ATA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119533 TCA cycle (plant) none Aegilops tauschii AET2Gv20412400 R-ATA-1127614-9 AET2Gv20412400 [cytosol] R-ATA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119261 Salicylate biosynthesis none Aegilops tauschii AET2Gv20412400 R-ATA-1127614-9 AET2Gv20412400 [cytosol] R-ATA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119418 Suberin biosynthesis none Aegilops tauschii AET2Gv20412400 R-ATA-1127614-9 AET2Gv20412400 [cytosol] R-ATA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops tauschii AET2Gv20412700 R-ATA-1127614-2 AET2Gv20412700 [cytosol] R-ATA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119261 Salicylate biosynthesis none Aegilops tauschii AET2Gv20412700 R-ATA-1127614-2 AET2Gv20412700 [cytosol] R-ATA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119418 Suberin biosynthesis none Aegilops tauschii AET2Gv20412700 R-ATA-1127614-2 AET2Gv20412700 [cytosol] R-ATA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops tauschii AET2Gv20433000 R-ATA-9025789 AET2Gv20433000 [cytosol] R-ATA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9025754 Mugineic acid biosynthesis none Aegilops tauschii AET2Gv20449500 R-ATA-1127614-6 AET2Gv20449500 [cytosol] R-ATA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119261 Salicylate biosynthesis none Aegilops tauschii AET2Gv20449500 R-ATA-1127614-6 AET2Gv20449500 [cytosol] R-ATA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119418 Suberin biosynthesis none Aegilops tauschii AET2Gv20449500 R-ATA-1127614-6 AET2Gv20449500 [cytosol] R-ATA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops tauschii AET2Gv20456000 R-ATA-1129816 AET2Gv20456000 [plastid stroma] R-ATA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119367 Polyisoprenoid biosynthesis none Aegilops tauschii AET2Gv20456000 R-ATA-1129816 AET2Gv20456000 [plastid stroma] R-ATA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119615 Mevalonate pathway none Aegilops tauschii AET2Gv20467600 R-ATA-1125494 AET2Gv20467600 [endoplasmic reticulum membrane] R-ATA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119402 Phospholipid biosynthesis I none Aegilops tauschii AET2Gv20469200 R-ATA-9918206 AET2Gv20469200 [amyloplast] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET2Gv20470200 R-ATA-1122433-2 AET2Gv20470200 [mitochondrial inner membrane] R-ATA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119533 TCA cycle (plant) none Aegilops tauschii AET2Gv20485100 R-ATA-9638996 AET2Gv20485100 [cytosol] R-ATA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119434 Phytic acid biosynthesis (lipid-independent) none Aegilops tauschii AET2Gv20486300 R-ATA-9035727 AET2Gv20486300 [cytosol] R-ATA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9035605 Regulation of seed size none Aegilops tauschii AET2Gv20486300 R-ATA-9035692 AET2Gv20486300 [nucleoplasm] R-ATA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9035605 Regulation of seed size none Aegilops tauschii AET2Gv20490800 R-ATA-9675357 AET2Gv20490800 [nucleoplasm] R-ATA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030680 Crown root development none Aegilops tauschii AET2Gv20495600 R-ATA-9658589 AET2Gv20495600 [endoplasmic reticulum lumen] R-ATA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119502 Allantoin degradation none Aegilops tauschii AET2Gv20504000 R-ATA-1125038 AET2Gv20504000 [plastid stroma] R-ATA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119449 Carotenoid biosynthesis none Aegilops tauschii AET2Gv20517400 R-ATA-1127705-2 AET2Gv20517400 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET2Gv20521600 R-ATA-1123575-2 AET2Gv20521600 [cytosol] R-ATA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119297 Beta-alanine biosynthesis III none Aegilops tauschii AET2Gv20530000 R-ATA-5146760 AET2Gv20530000 [mitochondrial matrix] R-ATA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119533 TCA cycle (plant) none Aegilops tauschii AET2Gv20531500 R-ATA-8933730 AET2Gv20531500 [nucleoplasm] R-ATA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8933811 Circadian rhythm none Aegilops tauschii AET2Gv20559400 R-ATA-1127467-2 AET2Gv20559400 [cytosol] R-ATA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119456 Brassinosteroid biosynthesis II none Aegilops tauschii AET2Gv20565300 R-ATA-5221149 AET2Gv20565300 [plastid] R-ATA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119374 Abscisic acid biosynthesis none Aegilops tauschii AET2Gv20565800 R-ATA-6787000 AET2Gv20565800 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET2Gv20565800 R-ATA-6787036 AET2Gv20565800 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET2Gv20565900 R-ATA-8987473 AET2Gv20565900 [peroxisomal matrix] R-ATA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119312 Photorespiration none Aegilops tauschii AET2Gv20565900 R-ATA-1122329 AET2Gv20565900 [cytosol] R-ATA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119596 Glutamate biosynthesis I none Aegilops tauschii AET2Gv20573300 R-ATA-5632266 AET2Gv20573300 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET2Gv20573300 R-ATA-5632266 AET2Gv20573300 [nucleoplasm] R-ATA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5679411 Gibberellin signaling none Aegilops tauschii AET2Gv20575200 R-ATA-1129247 AET2Gv20575200 [mitochondrial inner membrane] R-ATA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119533 TCA cycle (plant) none Aegilops tauschii AET2Gv20578200 R-ATA-9826652 OSH15 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET2Gv20589200 R-ATA-8987548 AET2Gv20589200 [peroxisomal matrix] R-ATA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119312 Photorespiration none Aegilops tauschii AET2Gv20590100 R-ATA-8934299 AET2Gv20590100 [nucleoplasm] R-ATA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934036 Long day regulated expression of florigens none Aegilops tauschii AET2Gv20590100 R-ATA-8934299 AET2Gv20590100 [nucleoplasm] R-ATA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934257 Transition from vegetative to reproductive shoot apical meristem none Aegilops tauschii AET2Gv20590100 R-ATA-8934299 AET2Gv20590100 [nucleoplasm] R-ATA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609102 Flower development none Aegilops tauschii AET2Gv20592800 R-ATA-1122287-15 AET2Gv20592800 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET2Gv20611200 R-ATA-9826615 RERJ1 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET2Gv20614000 R-ATA-1126320-2 AET2Gv20614000 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET2Gv20614100 R-ATA-1126320 AET2Gv20614100 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET2Gv20616900 R-ATA-1124866-4 AET2Gv20616900 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET2Gv20635100 R-ATA-1128549 AET2Gv20635100 [cytosol] R-ATA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119449 Carotenoid biosynthesis none Aegilops tauschii AET2Gv20641300 R-ATA-9646043 AET2Gv20641300 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET2Gv20641300 R-ATA-9646043 AET2Gv20641300 [nucleoplasm] R-ATA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675782 Maturation none Aegilops tauschii AET2Gv20641300 R-ATA-9646043 AET2Gv20641300 [nucleoplasm] R-ATA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675815 Leading strand synthesis none Aegilops tauschii AET2Gv20641300 R-ATA-9646043 AET2Gv20641300 [nucleoplasm] R-ATA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675824 DNA replication Initiation none Aegilops tauschii AET2Gv20641300 R-ATA-9646043 AET2Gv20641300 [nucleoplasm] R-ATA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675885 Lagging strand synthesis none Aegilops tauschii AET2Gv20643700 R-ATA-1127911 AET2Gv20643700 [mitochondrial matrix] R-ATA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119365 Lysine degradation II none Aegilops tauschii AET2Gv20648900 R-ATA-5608203 AET2Gv20648900 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET2Gv20648900 R-ATA-5608203 AET2Gv20648900 [nucleoplasm] R-ATA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9608575 Reproductive meristem phase change none Aegilops tauschii AET2Gv20648900 R-ATA-9658968 AET2Gv20648900 [cytosol] R-ATA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9608575 Reproductive meristem phase change none Aegilops tauschii AET2Gv20650500 R-ATA-6787123 AET2Gv20650500 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET2Gv20650500 R-ATA-6786942 AET2Gv20650500 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET2Gv20653700 R-ATA-9930242 AET2Gv20653700 [nucleoplasm] R-ATA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9766881 TF network involved in salinity response none Aegilops tauschii AET2Gv20662900 R-ATA-1128989 AET2Gv20662900 [plastid stroma] R-ATA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119509 Histidine biosynthesis I none Aegilops tauschii AET2Gv20668900 R-ATA-1124977 AET2Gv20668900 [cytosol] R-ATA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119586 Cyanate degradation none Aegilops tauschii AET2Gv20676800 R-ATA-8854121 AET2Gv20676800 [cytosol] R-ATA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119556 Choline biosynthesis I none Aegilops tauschii AET2Gv20700200 R-ATA-1124401 AET2Gv20700200 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET2Gv20703800 R-ATA-1124067 AET2Gv20703800 [amyloplast] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET2Gv20703800 R-ATA-9626520 AET2Gv20703800 [plastid stroma] R-ATA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9626305 Regulatory network of nutrient accumulation none Aegilops tauschii AET2Gv20715600 R-ATA-1124087 AET2Gv20715600 [cytosol] R-ATA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119332 Jasmonic acid biosynthesis none Aegilops tauschii AET2Gv20715600 R-ATA-1124087 AET2Gv20715600 [cytosol] R-ATA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119618 13-LOX and 13-HPL pathway none Aegilops tauschii AET2Gv20716600 R-ATA-1127019 AET2Gv20716600 [cytosol] R-ATA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119458 Glutamate degradation none Aegilops tauschii AET2Gv20717800 R-ATA-9029354 AET2Gv20717800 [extracellular region] R-ATA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9766881 TF network involved in salinity response none Aegilops tauschii AET2Gv20718600 R-ATA-4754219 AET2Gv20718600 [plastid stroma] R-ATA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119449 Carotenoid biosynthesis none Aegilops tauschii AET2Gv20722100 R-ATA-1128835 AET2Gv20722100 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET2Gv20733300 R-ATA-1127873 AET2Gv20733300 [plastid stroma] R-ATA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119424 Plastid glycolysis none Aegilops tauschii AET2Gv20733300 R-ATA-1127873 AET2Gv20733300 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET2Gv20737000 R-ATA-9766876 AET2Gv20737000 [nucleoplasm] R-ATA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9766881 TF network involved in salinity response none Aegilops tauschii AET2Gv20738900 R-ATA-5632200 AET2Gv20738900 [cytosol] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET2Gv20740100 R-ATA-1128637 AET2Gv20740100 [chloroplast] R-ATA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119494 Tryptophan biosynthesis none Aegilops tauschii AET2Gv20740600 R-ATA-1123551 AET2Gv20740600 [chloroplast] R-ATA-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119579 Glycine betaine biosynthesis III none Aegilops tauschii AET2Gv20744300 R-ATA-1125533 AET2Gv20744300 [cytosol] R-ATA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119304 Putrescine biosynthesis II none Aegilops tauschii AET2Gv20758200 R-ATA-9639957 AET2Gv20758200 [plasma membrane] R-ATA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9639861 Development of root hair none Aegilops tauschii AET2Gv20761300 R-ATA-1130141 AET2Gv20761300 [mitochondrial matrix] R-ATA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119533 TCA cycle (plant) none Aegilops tauschii AET2Gv20761300 R-ATA-1130141 AET2Gv20761300 [mitochondrial matrix] R-ATA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119540 Leucine biosynthesis none Aegilops tauschii AET2Gv20792900 R-ATA-9675272-2 AET2Gv20792900 [plasma membrane] R-ATA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030654 Primary root development none Aegilops tauschii AET2Gv20793500 R-ATA-1123563 AET2Gv20793500 [cytosol] R-ATA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119379 Flavin biosynthesis none Aegilops tauschii AET2Gv20796200 R-ATA-1122932 AET2Gv20796200 [cytosol] R-ATA-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119317 Spermine biosynthesis none Aegilops tauschii AET2Gv20796200 R-ATA-1122932 AET2Gv20796200 [cytosol] R-ATA-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119343 Spermidine biosynthesis none Aegilops tauschii AET2Gv20796200 R-ATA-1122932 AET2Gv20796200 [cytosol] R-ATA-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119446 Lysine degradation I none Aegilops tauschii AET2Gv20801400 R-ATA-1125317 AET2Gv20801400 [cytosol] R-ATA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119316 Phenylpropanoid biosynthesis none Aegilops tauschii AET2Gv20805500 R-ATA-5683299 AET2Gv20805500 [cytosol] R-ATA-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119451 Xylose degradation none Aegilops tauschii AET2Gv20810400 R-ATA-8934251 AET2Gv20810400 [nucleoplasm] R-ATA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934108 Short day regulated expression of florigens none Aegilops tauschii AET2Gv20820300 R-ATA-9640689 AET2Gv20820300 [nucleoplasm] R-ATA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675782 Maturation none Aegilops tauschii AET2Gv20820300 R-ATA-9640689 AET2Gv20820300 [nucleoplasm] R-ATA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675815 Leading strand synthesis none Aegilops tauschii AET2Gv20820300 R-ATA-9640689 AET2Gv20820300 [nucleoplasm] R-ATA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675885 Lagging strand synthesis none Aegilops tauschii AET2Gv20833800 R-ATA-9025541 AET2Gv20833800 [endoplasmic reticulum membrane] R-ATA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119325 Sphingolipid metabolism none Aegilops tauschii AET2Gv20836000 R-ATA-9918222 AET2Gv20836000 [amyloplast] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET2Gv20847200 R-ATA-2685732 AET2Gv20847200 [cytosol] R-ATA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119580 IAA biosynthesis II none Aegilops tauschii AET2Gv20850300 R-ATA-1127614-10 AET2Gv20850300 [cytosol] R-ATA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119261 Salicylate biosynthesis none Aegilops tauschii AET2Gv20850300 R-ATA-1127614-10 AET2Gv20850300 [cytosol] R-ATA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119418 Suberin biosynthesis none Aegilops tauschii AET2Gv20850300 R-ATA-1127614-10 AET2Gv20850300 [cytosol] R-ATA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops tauschii AET2Gv20850500 R-ATA-1127614-4 AET2Gv20850500 [cytosol] R-ATA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119261 Salicylate biosynthesis none Aegilops tauschii AET2Gv20850500 R-ATA-1127614-4 AET2Gv20850500 [cytosol] R-ATA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119418 Suberin biosynthesis none Aegilops tauschii AET2Gv20850500 R-ATA-1127614-4 AET2Gv20850500 [cytosol] R-ATA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops tauschii AET2Gv20850800 R-ATA-1127614-7 AET2Gv20850800 [cytosol] R-ATA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119261 Salicylate biosynthesis none Aegilops tauschii AET2Gv20850800 R-ATA-1127614-7 AET2Gv20850800 [cytosol] R-ATA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119418 Suberin biosynthesis none Aegilops tauschii AET2Gv20850800 R-ATA-1127614-7 AET2Gv20850800 [cytosol] R-ATA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops tauschii AET2Gv20850900 R-ATA-1127614-11 AET2Gv20850900 [cytosol] R-ATA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119261 Salicylate biosynthesis none Aegilops tauschii AET2Gv20850900 R-ATA-1127614-11 AET2Gv20850900 [cytosol] R-ATA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119418 Suberin biosynthesis none Aegilops tauschii AET2Gv20850900 R-ATA-1127614-11 AET2Gv20850900 [cytosol] R-ATA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops tauschii AET2Gv20853300 R-ATA-1128298 AET2Gv20853300 [cytosol] R-ATA-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119271 Threonine degradation none Aegilops tauschii AET2Gv20853300 R-ATA-1128298 AET2Gv20853300 [cytosol] R-ATA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119610 Biotin biosynthesis II none Aegilops tauschii AET2Gv20860000 R-ATA-1122855 AET2Gv20860000 [cytosol] R-ATA-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119360 Fructan biosynthesis none Aegilops tauschii AET2Gv20871400 R-ATA-9658643 AET2Gv20871400 [cytosol] R-ATA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119567 Beta-alanine biosynthesis I none Aegilops tauschii AET2Gv20875200 R-ATA-6786973 AET2Gv20875200 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET2Gv20877800 R-ATA-6787093 AET2Gv20877800 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET2Gv20884600 R-ATA-1129892 AET2Gv20884600 [cytosol] R-ATA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119334 Ethylene biosynthesis from methionine none Aegilops tauschii AET2Gv20884600 R-ATA-1129892 AET2Gv20884600 [cytosol] R-ATA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119624 Methionine salvage pathway none Aegilops tauschii AET2Gv20886100 R-ATA-1125093 AET2Gv20886100 [cytosol] R-ATA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119456 Brassinosteroid biosynthesis II none Aegilops tauschii AET2Gv20886400 R-ATA-1126602 AET2Gv20886400 [cytosol] R-ATA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119273 Lysine biosynthesis I none Aegilops tauschii AET2Gv20886400 R-ATA-1126602 AET2Gv20886400 [cytosol] R-ATA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119283 Lysine biosynthesis II none Aegilops tauschii AET2Gv20886400 R-ATA-5606494 AET2Gv20886400 [plastid stroma] R-ATA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119419 Lysine biosynthesis VI none Aegilops tauschii AET2Gv20888800 R-ATA-8879071 CBF1 homolog [nucleoplasm] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET2Gv20892400 R-ATA-9675851 AET2Gv20892400 [nucleoplasm] R-ATA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675815 Leading strand synthesis none Aegilops tauschii AET2Gv20893200 R-ATA-6787864 AET2Gv20893200 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET2Gv20902400 R-ATA-1128815 AET2Gv20902400 [cytosol] R-ATA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119452 Galactose degradation II none Aegilops tauschii AET2Gv20902400 R-ATA-1128815 AET2Gv20902400 [cytosol] R-ATA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119465 Sucrose biosynthesis none Aegilops tauschii AET2Gv20905100 R-ATA-1129277 AET2Gv20905100 [cytosol] R-ATA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119460 Isoleucine biosynthesis from threonine none Aegilops tauschii AET2Gv20905100 R-ATA-1129277 AET2Gv20905100 [cytosol] R-ATA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119496 Pantothenate biosynthesis I none Aegilops tauschii AET2Gv20905100 R-ATA-1129277 AET2Gv20905100 [cytosol] R-ATA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119540 Leucine biosynthesis none Aegilops tauschii AET2Gv20905100 R-ATA-1129277 AET2Gv20905100 [cytosol] R-ATA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119544 Pantothenate biosynthesis II none Aegilops tauschii AET2Gv20910300 R-ATA-1126615 AET2Gv20910300 [cytosol] R-ATA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119437 Glutathione redox reactions I none Aegilops tauschii AET2Gv20916900 R-ATA-9924407-2 EXPB5 [basolateral plasma membrane] R-ATA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops tauschii AET2Gv20917100 R-ATA-9924407 EXPB5 [basolateral plasma membrane] R-ATA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops tauschii AET2Gv20917900 R-ATA-5367777 AET2Gv20917900 [plastid stroma] R-ATA-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5367729 Strigolactone biosynthesis none Aegilops tauschii AET2Gv20918100 R-ATA-5138507 AET2Gv20918100 [plastid stroma] R-ATA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119263 Arginine biosynthesis none Aegilops tauschii AET2Gv20918100 R-ATA-5138507 AET2Gv20918100 [plastid stroma] R-ATA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119539 Ornithine biosynthesis none Aegilops tauschii AET2Gv20918100 R-ATA-5138507 AET2Gv20918100 [plastid stroma] R-ATA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119622 Arginine biosynthesis II (acetyl cycle) none Aegilops tauschii AET2Gv20919300 R-ATA-1128812 AET2Gv20919300 [cytosol] R-ATA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119393 Asparagine degradation I none Aegilops tauschii AET2Gv20919500 R-ATA-1128298-4 AET2Gv20919500 [cytosol] R-ATA-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119271 Threonine degradation none Aegilops tauschii AET2Gv20919500 R-ATA-1128298-4 AET2Gv20919500 [cytosol] R-ATA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119610 Biotin biosynthesis II none Aegilops tauschii AET2Gv20929900 R-ATA-9026148 AET2Gv20929900 [mitochondrion] R-ATA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119458 Glutamate degradation none Aegilops tauschii AET2Gv20938600 R-ATA-9826677-3 AET2Gv20938600 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET2Gv20948700 R-ATA-2731026-3 AET2Gv20948700 [endoplasmic reticulum membrane] R-ATA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119557 GA12 biosynthesis none Aegilops tauschii AET2Gv20948700 R-ATA-1130405-3 AET2Gv20948700 [endoplasmic reticulum membrane] R-ATA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119557 GA12 biosynthesis none Aegilops tauschii AET2Gv20964000 R-ATA-9675818-2 AET2Gv20964000 [nucleoplasm] R-ATA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675815 Leading strand synthesis none Aegilops tauschii AET2Gv20998800 R-ATA-9916124 OsPRX95 [extracellular region] R-ATA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119403 Removal of superoxide radicals none Aegilops tauschii AET2Gv20998800 R-ATA-9916124 OsPRX95 [extracellular region] R-ATA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9607185 Generation of superoxide radicals none Aegilops tauschii AET2Gv20999600 R-ATA-9675878 AET2Gv20999600 [nucleoplasm] R-ATA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675782 Maturation none Aegilops tauschii AET2Gv21005900 R-ATA-5221147 AET2Gv21005900 [cytosol] R-ATA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-3899351 Abscisic acid (ABA) mediated signaling none Aegilops tauschii AET2Gv21013400 R-ATA-1125584 AET2Gv21013400 [plastid stroma] R-ATA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119509 Histidine biosynthesis I none Aegilops tauschii AET2Gv21014800 R-ATA-1129564 AET2Gv21014800 [cytosol] R-ATA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119428 GDP-D-rhamnose biosynthesis none Aegilops tauschii AET2Gv21014800 R-ATA-9681913 AET2Gv21014800 [Golgi membrane] R-ATA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops tauschii AET2Gv21014800 R-ATA-1129564 AET2Gv21014800 [cytosol] R-ATA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops tauschii AET2Gv21020000 R-ATA-8879040 AET2Gv21020000 [nucleoplasm] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET2Gv21024500 R-ATA-9618186 AET2Gv21024500 [plant-type vacuole membrane] R-ATA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9618218 Arsenic uptake and detoxification none Aegilops tauschii AET2Gv21032700 R-ATA-8987539 AET2Gv21032700 [peroxisomal matrix] R-ATA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119312 Photorespiration none Aegilops tauschii AET2Gv21032700 R-ATA-1127383 AET2Gv21032700 [cytosol] R-ATA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119596 Glutamate biosynthesis I none Aegilops tauschii AET2Gv21032800 R-ATA-8987488 AET2Gv21032800 [mitochondrial matrix] R-ATA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119312 Photorespiration none Aegilops tauschii AET2Gv21035000 R-ATA-1127243 AET2Gv21035000 [amyloplast] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET2Gv21039500 R-ATA-1125974 AET2Gv21039500 [cytosol] R-ATA-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119262 Threonine biosynthesis from homoserine none Aegilops tauschii AET2Gv21039500 R-ATA-1125974 AET2Gv21039500 [cytosol] R-ATA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119400 Methionine biosynthesis II none Aegilops tauschii AET2Gv21039600 R-ATA-1126305 AET2Gv21039600 [cytosol] R-ATA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119332 Jasmonic acid biosynthesis none Aegilops tauschii AET2Gv21054100 R-ATA-1126269 AET2Gv21054100 [mitochondrial matrix] R-ATA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119479 Valine degradation none Aegilops tauschii AET2Gv21064400 R-ATA-5654913-2 AET2Gv21064400 [Golgi lumen] R-ATA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5654909 Xylan biosynthesis none Aegilops tauschii AET2Gv21079000 R-ATA-6787257 AET2Gv21079000 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET2Gv21079000 R-ATA-6787976 AET2Gv21079000 [cytosol] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET2Gv21079000 R-ATA-6787257 AET2Gv21079000 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET2Gv21079400 R-ATA-1129029-2 AET2Gv21079400 [cytosol] R-ATA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119501 S-adenosyl-L-methionine cycle none Aegilops tauschii AET2Gv21080900 R-ATA-1128613-4 AET2Gv21080900 [cytosol] R-ATA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119316 Phenylpropanoid biosynthesis none Aegilops tauschii AET2Gv21082200 R-ATA-5608137-2 AET2Gv21082200 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET2Gv21082400 R-ATA-5608137 AET2Gv21082400 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET2Gv21086200 R-ATA-2672431 AET2Gv21086200 [cytosol] R-ATA-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119322 Leucodelphinidin biosynthesis none Aegilops tauschii AET2Gv21086200 R-ATA-2672431 AET2Gv21086200 [cytosol] R-ATA-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Aegilops tauschii AET2Gv21086200 R-ATA-1124195 AET2Gv21086200 [cytosol] R-ATA-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119531 Flavonoid biosynthesis none Aegilops tauschii AET2Gv21086800 R-ATA-1129029 AET2Gv21086800 [cytosol] R-ATA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119501 S-adenosyl-L-methionine cycle none Aegilops tauschii AET2Gv21087000 R-ATA-9766892 SAPK1 [nucleoplasm] R-ATA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9766881 TF network involved in salinity response none Aegilops tauschii AET2Gv21090800 R-ATA-9675426-2 AET2Gv21090800 [nucleoplasm] R-ATA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030654 Primary root development none Aegilops tauschii AET2Gv21093800 R-ATA-9675426-3 AET2Gv21093800 [nucleoplasm] R-ATA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030654 Primary root development none Aegilops tauschii AET2Gv21096500 R-ATA-9681905 AET2Gv21096500 [Golgi membrane] R-ATA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops tauschii AET2Gv21097100 R-ATA-5632226 AET2Gv21097100 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET2Gv21113400 R-ATA-6787173 AET2Gv21113400 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET2Gv21113400 R-ATA-6786972 AET2Gv21113400 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET2Gv21114800 R-ATA-9611889 AET2Gv21114800 [mitochondrial matrix] R-ATA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119479 Valine degradation none Aegilops tauschii AET2Gv21120700 R-ATA-5654750 AET2Gv21120700 [cytosol] R-ATA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119393 Asparagine degradation I none Aegilops tauschii AET2Gv21121000 R-ATA-5654750-2 AET2Gv21121000 [cytosol] R-ATA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119393 Asparagine degradation I none Aegilops tauschii AET2Gv21124400 R-ATA-1126602-2 AET2Gv21124400 [cytosol] R-ATA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119273 Lysine biosynthesis I none Aegilops tauschii AET2Gv21124400 R-ATA-1126602-2 AET2Gv21124400 [cytosol] R-ATA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119283 Lysine biosynthesis II none Aegilops tauschii AET2Gv21124400 R-ATA-5606494-2 AET2Gv21124400 [plastid stroma] R-ATA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119419 Lysine biosynthesis VI none Aegilops tauschii AET2Gv21132900 R-ATA-9920344 AET2Gv21132900 [nucleoplasm] R-ATA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934108 Short day regulated expression of florigens none Aegilops tauschii AET2Gv21136600 R-ATA-1126860 AET2Gv21136600 [cytosol] R-ATA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119321 Glycerol degradation I none Aegilops tauschii AET2Gv21138400 R-ATA-1123150-5 AET2Gv21138400 [cytosol] R-ATA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops tauschii AET2Gv21138400 R-ATA-1123150-5 AET2Gv21138400 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET2Gv21138400 R-ATA-1123150-5 AET2Gv21138400 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET2Gv21138700 R-ATA-1123150-7 AET2Gv21138700 [cytosol] R-ATA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops tauschii AET2Gv21138700 R-ATA-1123150-7 AET2Gv21138700 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET2Gv21138700 R-ATA-1123150-7 AET2Gv21138700 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET2Gv21143200 R-ATA-1125417 AET2Gv21143200 [cytosol] R-ATA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119265 Tetrahydrofolate biosynthesis I none Aegilops tauschii AET2Gv21143200 R-ATA-1125417 AET2Gv21143200 [cytosol] R-ATA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119523 Tetrahydrofolate biosynthesis II none Aegilops tauschii AET2Gv21149400 R-ATA-5632242 AET2Gv21149400 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET2Gv21156200 R-ATA-1130308 AET2Gv21156200 [plastid stroma] R-ATA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119430 Chorismate biosynthesis none Aegilops tauschii AET2Gv21159800 R-ATA-1128463 AET2Gv21159800 [cytosol] R-ATA-1119550 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119550 Gentiodelphin biosynthesis none Aegilops tauschii AET2Gv21160100 R-ATA-1128463-3 AET2Gv21160100 [cytosol] R-ATA-1119550 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119550 Gentiodelphin biosynthesis none Aegilops tauschii AET2Gv21160200 R-ATA-1128463-2 AET2Gv21160200 [cytosol] R-ATA-1119550 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119550 Gentiodelphin biosynthesis none Aegilops tauschii AET2Gv21165300 R-ATA-1126354-2 AET2Gv21165300 [cytosol] R-ATA-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119531 Flavonoid biosynthesis none Aegilops tauschii AET2Gv21178700 R-ATA-1129811 AET2Gv21178700 [mitochondrion] R-ATA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119403 Removal of superoxide radicals none Aegilops tauschii AET2Gv21188900 R-ATA-1127324 AET2Gv21188900 [cytosol] R-ATA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119624 Methionine salvage pathway none Aegilops tauschii AET2Gv21195400 R-ATA-8986682-3 AET2Gv21195400 [extracellular region] R-ATA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8986768 Anther and pollen development none Aegilops tauschii AET2Gv21196300 R-ATA-8986682-4 AET2Gv21196300 [extracellular region] R-ATA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8986768 Anther and pollen development none Aegilops tauschii AET2Gv21198500 R-ATA-5608169 AET2Gv21198500 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET2Gv21232200 R-ATA-1129851 AET2Gv21232200 [mitochondrial matrix] R-ATA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119533 TCA cycle (plant) none Aegilops tauschii AET2Gv21232200 R-ATA-1129851 AET2Gv21232200 [mitochondrial matrix] R-ATA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119540 Leucine biosynthesis none Aegilops tauschii AET2Gv21236800 R-ATA-9025224 AET2Gv21236800 [endoplasmic reticulum lumen] R-ATA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119502 Allantoin degradation none Aegilops tauschii AET2Gv21238100 R-ATA-1127597 AET2Gv21238100 [cytosol] R-ATA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119615 Mevalonate pathway none Aegilops tauschii AET2Gv21243200 R-ATA-1125556-2 AET2Gv21243200 [cytosol] R-ATA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119410 Ascorbate biosynthesis none Aegilops tauschii AET2Gv21243200 R-ATA-1125556-2 AET2Gv21243200 [cytosol] R-ATA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119628 GDP-mannose metabolism none Aegilops tauschii AET2Gv21244000 R-ATA-1125670 AET2Gv21244000 [cytosol] R-ATA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119393 Asparagine degradation I none Aegilops tauschii AET2Gv21276100 R-ATA-1122433 AET2Gv21276100 [mitochondrial inner membrane] R-ATA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119533 TCA cycle (plant) none Aegilops tauschii AET2Gv21286200 R-ATA-5608213 AET2Gv21286200 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET2Gv21289700 R-ATA-4723663 AET2Gv21289700 [plastid stroma] R-ATA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119464 Methylerythritol phosphate pathway none Aegilops tauschii AET2Gv21289700 R-ATA-1126491 AET2Gv21289700 [cytosol] R-ATA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119594 Pyridoxal 5'-phosphate biosynthesis none Aegilops tauschii AET2Gv21289700 R-ATA-1126491 AET2Gv21289700 [cytosol] R-ATA-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119629 Thiamine biosynthesis none Aegilops tauschii AET2Gv21293500 R-ATA-1127599 AET2Gv21293500 [cytosol] R-ATA-1119388 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119388 IAA biosynthesis VI (via indole-3-acetamide) none Aegilops tauschii AET2Gv21304300 R-ATA-1124291-4 AET2Gv21304300 [cytosol] R-ATA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops tauschii AET2Gv21304300 R-ATA-1124291-4 AET2Gv21304300 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET2Gv21304300 R-ATA-1124291-4 AET2Gv21304300 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET2Gv21306500 R-ATA-9609608-6 AET2Gv21306500 [cytosol] R-ATA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609573 Tricin biosynthesis none Aegilops tauschii AET2Gv21306500 R-ATA-9916171-6 OsOMT [cytosol] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET2Gv21306500 R-ATA-9916312-6 OsOMT [nucleoplasm] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET3Gv20000300 R-ATA-1126916 AET3Gv20000300 [plastid stroma] R-ATA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119464 Methylerythritol phosphate pathway none Aegilops tauschii AET3Gv20003300 R-ATA-1125340 AET3Gv20003300 [plastid stroma] R-ATA-1119274 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119274 Monoterpene biosynthesis none Aegilops tauschii AET3Gv20003300 R-ATA-1125340 AET3Gv20003300 [plastid stroma] R-ATA-1119593 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119593 Oleoresin monoterpene volatiles biosynthesis none Aegilops tauschii AET3Gv20011500 R-ATA-1124270-2 AET3Gv20011500 [cytosol] R-ATA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119615 Mevalonate pathway none Aegilops tauschii AET3Gv20011600 R-ATA-1124270 AET3Gv20011600 [cytosol] R-ATA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119615 Mevalonate pathway none Aegilops tauschii AET3Gv20015500 R-ATA-8868961 AET3Gv20015500 [plant-type vacuole membrane] R-ATA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8868949 Intracellular auxin transport none Aegilops tauschii AET3Gv20028500 R-ATA-1127574 AET3Gv20028500 [cytosol] R-ATA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119465 Sucrose biosynthesis none Aegilops tauschii AET3Gv20036700 R-ATA-1125701-2 AET3Gv20036700 [cytosol] R-ATA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119261 Salicylate biosynthesis none Aegilops tauschii AET3Gv20036700 R-ATA-1125701-2 AET3Gv20036700 [cytosol] R-ATA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119418 Suberin biosynthesis none Aegilops tauschii AET3Gv20036700 R-ATA-1125701-2 AET3Gv20036700 [cytosol] R-ATA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops tauschii AET3Gv20037000 R-ATA-1125701 AET3Gv20037000 [cytosol] R-ATA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119261 Salicylate biosynthesis none Aegilops tauschii AET3Gv20037000 R-ATA-1125701 AET3Gv20037000 [cytosol] R-ATA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119418 Suberin biosynthesis none Aegilops tauschii AET3Gv20037000 R-ATA-1125701 AET3Gv20037000 [cytosol] R-ATA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops tauschii AET3Gv20041900 R-ATA-1123150-6 AET3Gv20041900 [cytosol] R-ATA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops tauschii AET3Gv20041900 R-ATA-1123150-6 AET3Gv20041900 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET3Gv20041900 R-ATA-1123150-6 AET3Gv20041900 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET3Gv20048400 R-ATA-1122843 AET3Gv20048400 [cytosol] R-ATA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119458 Glutamate degradation none Aegilops tauschii AET3Gv20051500 R-ATA-9025363 AET3Gv20051500 [endoplasmic reticulum membrane] R-ATA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119402 Phospholipid biosynthesis I none Aegilops tauschii AET3Gv20053100 R-ATA-5149676 AET3Gv20053100 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET3Gv20055400 R-ATA-9675272 AET3Gv20055400 [plasma membrane] R-ATA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030654 Primary root development none Aegilops tauschii AET3Gv20057500 R-ATA-5654913 AET3Gv20057500 [Golgi lumen] R-ATA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5654909 Xylan biosynthesis none Aegilops tauschii AET3Gv20062300 R-ATA-9916160 AET3Gv20062300 [nucleoplasm] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET3Gv20069000 R-ATA-1126531 AET3Gv20069000 [cytosol] R-ATA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119410 Ascorbate biosynthesis none Aegilops tauschii AET3Gv20069000 R-ATA-1126531 AET3Gv20069000 [cytosol] R-ATA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119628 GDP-mannose metabolism none Aegilops tauschii AET3Gv20069700 R-ATA-6787004 AET3Gv20069700 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET3Gv20069700 R-ATA-6786938 AET3Gv20069700 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET3Gv20075300 R-ATA-1129781 AET3Gv20075300 [chloroplast] R-ATA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119494 Tryptophan biosynthesis none Aegilops tauschii AET3Gv20076400 R-ATA-1128637-2 AET3Gv20076400 [chloroplast] R-ATA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119494 Tryptophan biosynthesis none Aegilops tauschii AET3Gv20108100 R-ATA-1127346-3 AET3Gv20108100 [cytosol] R-ATA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119316 Phenylpropanoid biosynthesis none Aegilops tauschii AET3Gv20118000 R-ATA-9826681 EREBP129 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET3Gv20118400 R-ATA-9826681-2 EREBP129 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET3Gv20164100 R-ATA-5367761 AET3Gv20164100 [plastid stroma] R-ATA-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5367729 Strigolactone biosynthesis none Aegilops tauschii AET3Gv20165500 R-ATA-1125877 AET3Gv20165500 [cytosol] R-ATA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119456 Brassinosteroid biosynthesis II none Aegilops tauschii AET3Gv20168400 R-ATA-1128322 AET3Gv20168400 [cytosol] R-ATA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119384 NAD biosynthesis I (from aspartate) none Aegilops tauschii AET3Gv20169900 R-ATA-5633387 AET3Gv20169900 [mitochondrial matrix] R-ATA-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119445 Beta-alanine biosynthesis II none Aegilops tauschii AET3Gv20173900 R-ATA-1123211 AET3Gv20173900 [cytosol] R-ATA-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Aegilops tauschii AET3Gv20173900 R-ATA-1123211 AET3Gv20173900 [cytosol] R-ATA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119370 Sterol biosynthesis none Aegilops tauschii AET3Gv20173900 R-ATA-1123211 AET3Gv20173900 [cytosol] R-ATA-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119439 Cholesterol biosynthesis III (via desmosterol) none Aegilops tauschii AET3Gv20173900 R-ATA-1123211 AET3Gv20173900 [cytosol] R-ATA-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119559 Cholesterol biosynthesis I none Aegilops tauschii AET3Gv20178800 R-ATA-9609608-8 AET3Gv20178800 [cytosol] R-ATA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609573 Tricin biosynthesis none Aegilops tauschii AET3Gv20178800 R-ATA-9916171-8 OsOMT [cytosol] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET3Gv20178800 R-ATA-9916312-8 OsOMT [nucleoplasm] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET3Gv20180200 R-ATA-1125182 AET3Gv20180200 [plastid stroma] R-ATA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119430 Chorismate biosynthesis none Aegilops tauschii AET3Gv20181400 R-ATA-1128613-2 AET3Gv20181400 [cytosol] R-ATA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119316 Phenylpropanoid biosynthesis none Aegilops tauschii AET3Gv20183300 R-ATA-1130231 AET3Gv20183300 [endoplasmic reticulum membrane] R-ATA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119325 Sphingolipid metabolism none Aegilops tauschii AET3Gv20188600 R-ATA-1122545 AET3Gv20188600 [cytosol] R-ATA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119331 Cysteine biosynthesis I none Aegilops tauschii AET3Gv20201800 R-ATA-1125521-2 AET3Gv20201800 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET3Gv20214800 R-ATA-6788042 AET3Gv20214800 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET3Gv20221600 R-ATA-1124797 AET3Gv20221600 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET3Gv20221900 R-ATA-1124797-6 AET3Gv20221900 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET3Gv20225800 R-ATA-1124944-2 AET3Gv20225800 [plastid stroma] R-ATA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119460 Isoleucine biosynthesis from threonine none Aegilops tauschii AET3Gv20225800 R-ATA-1124944-2 AET3Gv20225800 [plastid stroma] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET3Gv20225800 R-ATA-1124944-2 AET3Gv20225800 [plastid stroma] R-ATA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119502 Allantoin degradation none Aegilops tauschii AET3Gv20225800 R-ATA-1124944-2 AET3Gv20225800 [plastid stroma] R-ATA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119600 Valine biosynthesis none Aegilops tauschii AET3Gv20226000 R-ATA-1124944 AET3Gv20226000 [plastid stroma] R-ATA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119460 Isoleucine biosynthesis from threonine none Aegilops tauschii AET3Gv20226000 R-ATA-1124944 AET3Gv20226000 [plastid stroma] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET3Gv20226000 R-ATA-1124944 AET3Gv20226000 [plastid stroma] R-ATA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119502 Allantoin degradation none Aegilops tauschii AET3Gv20226000 R-ATA-1124944 AET3Gv20226000 [plastid stroma] R-ATA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119600 Valine biosynthesis none Aegilops tauschii AET3Gv20227300 R-ATA-9826661 AET3Gv20227300 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET3Gv20230700 R-ATA-5679376 AET3Gv20230700 [nucleoplasm] R-ATA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5679411 Gibberellin signaling none Aegilops tauschii AET3Gv20232400 R-ATA-6788127-2 AET3Gv20232400 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET3Gv20232400 R-ATA-6788179-2 AET3Gv20232400 [cytosol] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET3Gv20232700 R-ATA-6788127 AET3Gv20232700 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET3Gv20232700 R-ATA-6788179 AET3Gv20232700 [cytosol] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET3Gv20234700 R-ATA-1125060 AET3Gv20234700 [cytosol] R-ATA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119334 Ethylene biosynthesis from methionine none Aegilops tauschii AET3Gv20234700 R-ATA-1125060 AET3Gv20234700 [cytosol] R-ATA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119624 Methionine salvage pathway none Aegilops tauschii AET3Gv20235900 R-ATA-9916314 OsDOS [nucleoplasm] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET3Gv20237600 R-ATA-1125058 AET3Gv20237600 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET3Gv20239100 R-ATA-1122541 AET3Gv20239100 [cytosol] R-ATA-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Aegilops tauschii AET3Gv20239100 R-ATA-1122541 AET3Gv20239100 [cytosol] R-ATA-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Aegilops tauschii AET3Gv20252200 R-ATA-2885386 AET3Gv20252200 [cytosol] R-ATA-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119417 Stachyose biosynthesis none Aegilops tauschii AET3Gv20254600 R-ATA-8854120 AET3Gv20254600 [cytosol] R-ATA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119556 Choline biosynthesis I none Aegilops tauschii AET3Gv20255500 R-ATA-8933813 AET3Gv20255500 [nucleoplasm] R-ATA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8933811 Circadian rhythm none Aegilops tauschii AET3Gv20255500 R-ATA-8933813 AET3Gv20255500 [nucleoplasm] R-ATA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934036 Long day regulated expression of florigens none Aegilops tauschii AET3Gv20255500 R-ATA-8933813 AET3Gv20255500 [nucleoplasm] R-ATA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops tauschii AET3Gv20255500 R-ATA-8933813 AET3Gv20255500 [nucleoplasm] R-ATA-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9928946 Drought escape (DE) via ABA-independent pathway none Aegilops tauschii AET3Gv20261100 R-ATA-9645866 AET3Gv20261100 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET3Gv20261100 R-ATA-9645866 AET3Gv20261100 [nucleoplasm] R-ATA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675824 DNA replication Initiation none Aegilops tauschii AET3Gv20272300 R-ATA-1128678 AET3Gv20272300 [cytosol] R-ATA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119292 Cytokinins 7-N-glucoside biosynthesis none Aegilops tauschii AET3Gv20272300 R-ATA-1128678 AET3Gv20272300 [cytosol] R-ATA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119375 Cytokinins 9-N-glucoside biosynthesis none Aegilops tauschii AET3Gv20272300 R-ATA-1128678 AET3Gv20272300 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET3Gv20272400 R-ATA-1128678-3 AET3Gv20272400 [cytosol] R-ATA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119292 Cytokinins 7-N-glucoside biosynthesis none Aegilops tauschii AET3Gv20272400 R-ATA-1128678-3 AET3Gv20272400 [cytosol] R-ATA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119375 Cytokinins 9-N-glucoside biosynthesis none Aegilops tauschii AET3Gv20272400 R-ATA-1128678-3 AET3Gv20272400 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET3Gv20273000 R-ATA-1128678-2 AET3Gv20273000 [cytosol] R-ATA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119292 Cytokinins 7-N-glucoside biosynthesis none Aegilops tauschii AET3Gv20273000 R-ATA-1128678-2 AET3Gv20273000 [cytosol] R-ATA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119375 Cytokinins 9-N-glucoside biosynthesis none Aegilops tauschii AET3Gv20273000 R-ATA-1128678-2 AET3Gv20273000 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET3Gv20283800 R-ATA-1122471 AET3Gv20283800 [cytosol] R-ATA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119276 Choline biosynthesis III none Aegilops tauschii AET3Gv20294900 R-ATA-1127076-2 AET3Gv20294900 [cytosol] R-ATA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119418 Suberin biosynthesis none Aegilops tauschii AET3Gv20294900 R-ATA-1127076-2 AET3Gv20294900 [cytosol] R-ATA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops tauschii AET3Gv20295400 R-ATA-5632139 AET3Gv20295400 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET3Gv20298000 R-ATA-9675827 AET3Gv20298000 [nucleoplasm] R-ATA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675782 Maturation none Aegilops tauschii AET3Gv20298000 R-ATA-9675827 AET3Gv20298000 [nucleoplasm] R-ATA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675815 Leading strand synthesis none Aegilops tauschii AET3Gv20298000 R-ATA-9675827 AET3Gv20298000 [nucleoplasm] R-ATA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675885 Lagging strand synthesis none Aegilops tauschii AET3Gv20298900 R-ATA-5632315 AET3Gv20298900 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET3Gv20298900 R-ATA-5632284 phospho-AET3Gv20298900 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET3Gv20298900 R-ATA-5632277 phospho-AET3Gv20298900 [cytosol] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET3Gv20298900 R-ATA-5632315 AET3Gv20298900 [nucleoplasm] R-ATA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5679411 Gibberellin signaling none Aegilops tauschii AET3Gv20304700 R-ATA-1125698 AET3Gv20304700 [cytosol] R-ATA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119436 Peptidoglycan biosynthesis I none Aegilops tauschii AET3Gv20328800 R-ATA-6787202 AET3Gv20328800 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET3Gv20346200 R-ATA-1126395 AET3Gv20346200 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET3Gv20346600 R-ATA-1124096-2 AET3Gv20346600 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET3Gv20348900 R-ATA-9611557 RAC1 [plasma membrane] R-ATA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops tauschii AET3Gv20351100 R-ATA-1126435 AET3Gv20351100 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET3Gv20360600 R-ATA-6787066 AET3Gv20360600 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET3Gv20362500 R-ATA-9675365 AET3Gv20362500 [nucleoplasm] R-ATA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675508 Root elongation none Aegilops tauschii AET3Gv20367400 R-ATA-1127373 AET3Gv20367400 [cytosol] R-ATA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119297 Beta-alanine biosynthesis III none Aegilops tauschii AET3Gv20381700 R-ATA-5679436 AET3Gv20381700 [nucleoplasm] R-ATA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5679411 Gibberellin signaling none Aegilops tauschii AET3Gv20386000 R-ATA-6787229 AET3Gv20386000 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET3Gv20386000 R-ATA-9826659 AET3Gv20386000 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET3Gv20393900 R-ATA-9675273 AET3Gv20393900 [nucleoplasm] R-ATA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030557 Lateral root initiation none Aegilops tauschii AET3Gv20397300 R-ATA-5632301 AET3Gv20397300 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET3Gv20397300 R-ATA-5632301 AET3Gv20397300 [nucleoplasm] R-ATA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5654828 Strigolactone signaling none Aegilops tauschii AET3Gv20397300 R-ATA-5632301 AET3Gv20397300 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET3Gv20408300 R-ATA-4788601 AET3Gv20408300 [plastid stroma] R-ATA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119509 Histidine biosynthesis I none Aegilops tauschii AET3Gv20415100 R-ATA-9607132-2 RBOHB [plasma membrane] R-ATA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops tauschii AET3Gv20415100 R-ATA-9611529-2 phospho-phosphorylated-RBOHB [plasma membrane] R-ATA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops tauschii AET3Gv20426900 R-ATA-1123596 AET3Gv20426900 [plastid stroma] R-ATA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119509 Histidine biosynthesis I none Aegilops tauschii AET3Gv20448900 R-ATA-1124164-2 AET3Gv20448900 [cytosol] R-ATA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119334 Ethylene biosynthesis from methionine none Aegilops tauschii AET3Gv20448900 R-ATA-1124164-2 AET3Gv20448900 [cytosol] R-ATA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119501 S-adenosyl-L-methionine cycle none Aegilops tauschii AET3Gv20448900 R-ATA-1124164-2 AET3Gv20448900 [cytosol] R-ATA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119624 Methionine salvage pathway none Aegilops tauschii AET3Gv20448900 R-ATA-9025764-2 AET3Gv20448900 [cytosol] R-ATA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9025754 Mugineic acid biosynthesis none Aegilops tauschii AET3Gv20466100 R-ATA-9612380 AET3Gv20466100 [cytosol] R-ATA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119612 Cysteine degradation none Aegilops tauschii AET3Gv20482200 R-ATA-9640761 AET3Gv20482200 [nucleoplasm] R-ATA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640882 Assembly of pre-replication complex none Aegilops tauschii AET3Gv20482200 R-ATA-9640761 AET3Gv20482200 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET3Gv20482200 R-ATA-9640761 AET3Gv20482200 [nucleoplasm] R-ATA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675824 DNA replication Initiation none Aegilops tauschii AET3Gv20496900 R-ATA-1127695 AET3Gv20496900 [plastid stroma] R-ATA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119430 Chorismate biosynthesis none Aegilops tauschii AET3Gv20503700 R-ATA-2685730 AET3Gv20503700 [cytosol] R-ATA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119580 IAA biosynthesis II none Aegilops tauschii AET3Gv20509600 R-ATA-5679401 AET3Gv20509600 [nucleoplasm] R-ATA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5679411 Gibberellin signaling none Aegilops tauschii AET3Gv20522700 R-ATA-9608693 AET3Gv20522700 [cytosol] R-ATA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9608575 Reproductive meristem phase change none Aegilops tauschii AET3Gv20544700 R-ATA-9684771 AET3Gv20544700 [cytosol] R-ATA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609102 Flower development none Aegilops tauschii AET3Gv20549400 R-ATA-9684771-3 AET3Gv20549400 [cytosol] R-ATA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609102 Flower development none Aegilops tauschii AET3Gv20556700 R-ATA-5632188 AET3Gv20556700 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET3Gv20562100 R-ATA-1125570-2 AET3Gv20562100 [cytosol] R-ATA-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119450 Homocysteine biosynthesis none Aegilops tauschii AET3Gv20563900 R-ATA-1130327 AET3Gv20563900 [cytosol] R-ATA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119586 Cyanate degradation none Aegilops tauschii AET3Gv20564600 R-ATA-1123694 AET3Gv20564600 [plastid stroma] R-ATA-1119274 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119274 Monoterpene biosynthesis none Aegilops tauschii AET3Gv20564600 R-ATA-1123694 AET3Gv20564600 [plastid stroma] R-ATA-1119593 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119593 Oleoresin monoterpene volatiles biosynthesis none Aegilops tauschii AET3Gv20567200 R-ATA-1128126 AET3Gv20567200 [endosome] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET3Gv20567200 R-ATA-5679348 AET3Gv20567200 [plasma membrane] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET3Gv20570500 R-ATA-1126875 AET3Gv20570500 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET3Gv20586500 R-ATA-4752547 AET3Gv20586500 [plastid stroma] R-ATA-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119498 Phylloquinone biosynthesis none Aegilops tauschii AET3Gv20593900 R-ATA-9612372 AET3Gv20593900 [mitochondrial matrix] R-ATA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119612 Cysteine degradation none Aegilops tauschii AET3Gv20598400 R-ATA-5608132 AET3Gv20598400 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET3Gv20602800 R-ATA-8854110 AET3Gv20602800 [cytosol] R-ATA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119556 Choline biosynthesis I none Aegilops tauschii AET3Gv20603000 R-ATA-1129466 AET3Gv20603000 [cytosol] R-ATA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119449 Carotenoid biosynthesis none Aegilops tauschii AET3Gv20604000 R-ATA-8858063 AET3Gv20604000 [plasma membrane] R-ATA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8858053 Polar auxin transport none Aegilops tauschii AET3Gv20607000 R-ATA-8934263 AET3Gv20607000 [nucleoplasm] R-ATA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934036 Long day regulated expression of florigens none Aegilops tauschii AET3Gv20611300 R-ATA-8987557 AET3Gv20611300 [mitochondrial matrix] R-ATA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119312 Photorespiration none Aegilops tauschii AET3Gv20612000 R-ATA-9658664 AET3Gv20612000 [plasma membrane] R-ATA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119567 Beta-alanine biosynthesis I none Aegilops tauschii AET3Gv20617200 R-ATA-6787238 AET3Gv20617200 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET3Gv20619900 R-ATA-1130006 AET3Gv20619900 [plastid stroma] R-ATA-1119569 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119569 Kievitone biosynthesis none Aegilops tauschii AET3Gv20627900 R-ATA-1124970 AET3Gv20627900 [cytosol] R-ATA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119556 Choline biosynthesis I none Aegilops tauschii AET3Gv20629700 R-ATA-1130059 AET3Gv20629700 [cytosol] R-ATA-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119262 Threonine biosynthesis from homoserine none Aegilops tauschii AET3Gv20633200 R-ATA-5632121 AET3Gv20633200 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET3Gv20639800 R-ATA-9640785 AET3Gv20639800 [nucleoplasm] R-ATA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640882 Assembly of pre-replication complex none Aegilops tauschii AET3Gv20639800 R-ATA-9640785 AET3Gv20639800 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET3Gv20640600 R-ATA-8987467 AET3Gv20640600 [chloroplast] R-ATA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119502 Allantoin degradation none Aegilops tauschii AET3Gv20641300 R-ATA-1129859 AET3Gv20641300 [chloroplast stroma] R-ATA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119443 Ammonia assimilation cycle none Aegilops tauschii AET3Gv20641300 R-ATA-5606382 AET3Gv20641300 [plastid stroma] R-ATA-1119535 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119535 Glutamate biosynthesis IV none Aegilops tauschii AET3Gv20645000 R-ATA-9640723 AET3Gv20645000 [nucleoplasm] R-ATA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640887 G1/S transition none Aegilops tauschii AET3Gv20647200 R-ATA-1124692 AET3Gv20647200 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET3Gv20662800 R-ATA-1126981 AET3Gv20662800 [nucleoplasm] R-ATA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030680 Crown root development none Aegilops tauschii AET3Gv20667500 R-ATA-1127292 AET3Gv20667500 [plastid stroma] R-ATA-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Aegilops tauschii AET3Gv20669100 R-ATA-9607105 AET3Gv20669100 [mitochondrion] R-ATA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9607185 Generation of superoxide radicals none Aegilops tauschii AET3Gv20669900 R-ATA-1124809 AET3Gv20669900 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET3Gv20677700 R-ATA-1127753 AET3Gv20677700 [cytosol] R-ATA-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119278 PRPP biosynthesis I none Aegilops tauschii AET3Gv20679800 R-ATA-1128798 AET3Gv20679800 [cytosol] R-ATA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119331 Cysteine biosynthesis I none Aegilops tauschii AET3Gv20684200 R-ATA-6788120 AET3Gv20684200 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET3Gv20684200 R-ATA-6788120 AET3Gv20684200 [nucleoplasm] R-ATA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9766881 TF network involved in salinity response none Aegilops tauschii AET3Gv20684500 R-ATA-1124491 AET3Gv20684500 [plasma membrane] R-ATA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119314 Cellulose biosynthesis none Aegilops tauschii AET3Gv20687900 R-ATA-1124083 AET3Gv20687900 [cytosol] R-ATA-1119323 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119323 Lipid-A-precursor biosynthesis none Aegilops tauschii AET3Gv20689200 R-ATA-5608212 AET3Gv20689200 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET3Gv20689200 R-ATA-5608212 AET3Gv20689200 [nucleoplasm] R-ATA-9675304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675304 Lateral root emergence none Aegilops tauschii AET3Gv20697800 R-ATA-1123745 AET3Gv20697800 [endoplasmic reticulum membrane] R-ATA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119260 Cardiolipin biosynthesis none Aegilops tauschii AET3Gv20697800 R-ATA-1123745 AET3Gv20697800 [endoplasmic reticulum membrane] R-ATA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119402 Phospholipid biosynthesis I none Aegilops tauschii AET3Gv20700900 R-ATA-1125734 AET3Gv20700900 [cytosol] R-ATA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119281 Aspartate biosynthesis I none Aegilops tauschii AET3Gv20700900 R-ATA-5632000 AET3Gv20700900 [plastid stroma] R-ATA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119553 Asparagine biosynthesis none Aegilops tauschii AET3Gv20708100 R-ATA-1126095 AET3Gv20708100 [cytosol] R-ATA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119389 Phenylalanine biosynthesis I none Aegilops tauschii AET3Gv20713100 R-ATA-6788026 AET3Gv20713100 [cytosol] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET3Gv20716700 R-ATA-1127318 AET3Gv20716700 [cytosol] R-ATA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops tauschii AET3Gv20716700 R-ATA-1127318 AET3Gv20716700 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET3Gv20716700 R-ATA-1127318 AET3Gv20716700 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET3Gv20729700 R-ATA-8986863-3 AET3Gv20729700 [plasma membrane] R-ATA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8986768 Anther and pollen development none Aegilops tauschii AET3Gv20734600 R-ATA-9025487 AET3Gv20734600 [cytosol] R-ATA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119325 Sphingolipid metabolism none Aegilops tauschii AET3Gv20742100 R-ATA-9675860 AET3Gv20742100 [nucleoplasm] R-ATA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675824 DNA replication Initiation none Aegilops tauschii AET3Gv20742800 R-ATA-1127999 AET3Gv20742800 [mitochondrial inner membrane] R-ATA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119260 Cardiolipin biosynthesis none Aegilops tauschii AET3Gv20751700 R-ATA-9025331 AET3Gv20751700 [cytosol] R-ATA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119402 Phospholipid biosynthesis I none Aegilops tauschii AET3Gv20752100 R-ATA-4723690 AET3Gv20752100 [plastid stroma] R-ATA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119464 Methylerythritol phosphate pathway none Aegilops tauschii AET3Gv20752600 R-ATA-1130025-2 AET3Gv20752600 [endosome] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET3Gv20752600 R-ATA-5679302-2 AET3Gv20752600 [plasma membrane] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET3Gv20752800 R-ATA-9681915 AET3Gv20752800 [Golgi membrane] R-ATA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops tauschii AET3Gv20757100 R-ATA-1127373-2 AET3Gv20757100 [cytosol] R-ATA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119297 Beta-alanine biosynthesis III none Aegilops tauschii AET3Gv20757200 R-ATA-6788041 AET3Gv20757200 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET3Gv20761100 R-ATA-9608678 AET3Gv20761100 [cytosol] R-ATA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9608575 Reproductive meristem phase change none Aegilops tauschii AET3Gv20761100 R-ATA-8986843 AET3Gv20761100 [nucleoplasm] R-ATA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9608575 Reproductive meristem phase change none Aegilops tauschii AET3Gv20762800 R-ATA-9618135-2 AET3Gv20762800 [plasma membrane] R-ATA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9618218 Arsenic uptake and detoxification none Aegilops tauschii AET3Gv20765300 R-ATA-1123610 AET3Gv20765300 [cytosol] R-ATA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119389 Phenylalanine biosynthesis I none Aegilops tauschii AET3Gv20765300 R-ATA-1123610 AET3Gv20765300 [cytosol] R-ATA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119400 Methionine biosynthesis II none Aegilops tauschii AET3Gv20765300 R-ATA-1123610 AET3Gv20765300 [cytosol] R-ATA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119506 tyrosine degradation I none Aegilops tauschii AET3Gv20768900 R-ATA-6788072 AET3Gv20768900 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET3Gv20772300 R-ATA-8868904 AET3Gv20772300 [endoplasmic reticulum membrane] R-ATA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8868949 Intracellular auxin transport none Aegilops tauschii AET3Gv20777800 R-ATA-9766833 AET3Gv20777800 [nucleoplasm] R-ATA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9766881 TF network involved in salinity response none Aegilops tauschii AET3Gv20783000 R-ATA-9675399 AET3Gv20783000 [nucleoplasm] R-ATA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030654 Primary root development none Aegilops tauschii AET3Gv20784500 R-ATA-6786908 AET3Gv20784500 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET3Gv20784500 R-ATA-6786908 AET3Gv20784500 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET3Gv20790300 R-ATA-9916309 CPK3 [plasma membrane] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET3Gv20795300 R-ATA-9639874 AET3Gv20795300 [plasma membrane] R-ATA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9639861 Development of root hair none Aegilops tauschii AET3Gv20798800 R-ATA-9639018 AET3Gv20798800 [cytosol] R-ATA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119434 Phytic acid biosynthesis (lipid-independent) none Aegilops tauschii AET3Gv20799300 R-ATA-8879076-2 AET3Gv20799300 [nucleoplasm] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET3Gv20800300 R-ATA-8879076 AET3Gv20800300 [nucleoplasm] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET3Gv20802200 R-ATA-9930212 AET3Gv20802200 [nucleoplasm] R-ATA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9766881 TF network involved in salinity response none Aegilops tauschii AET3Gv20814900 R-ATA-4415084 AET3Gv20814900 [cytosol] R-ATA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-3899351 Abscisic acid (ABA) mediated signaling none Aegilops tauschii AET3Gv20816800 R-ATA-1130202 AET3Gv20816800 [cytosol] R-ATA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119410 Ascorbate biosynthesis none Aegilops tauschii AET3Gv20821500 R-ATA-1124269 AET3Gv20821500 [cytosol] R-ATA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119456 Brassinosteroid biosynthesis II none Aegilops tauschii AET3Gv20822400 R-ATA-5149683 AET3Gv20822400 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET3Gv20823500 R-ATA-6787181 AET3Gv20823500 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET3Gv20826800 R-ATA-9640886 AET3Gv20826800 [nucleoplasm] R-ATA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640882 Assembly of pre-replication complex none Aegilops tauschii AET3Gv20826800 R-ATA-9640886 AET3Gv20826800 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET3Gv20827000 R-ATA-8858070 AET3Gv20827000 [plasma membrane] R-ATA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9639861 Development of root hair none Aegilops tauschii AET3Gv20831700 R-ATA-9930216-2 ABI5 [nucleoplasm] R-ATA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9766881 TF network involved in salinity response none Aegilops tauschii AET3Gv20832500 R-ATA-9930216 ABI5 [nucleoplasm] R-ATA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9766881 TF network involved in salinity response none Aegilops tauschii AET3Gv20832700 R-ATA-6787863 AET3Gv20832700 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET3Gv20833200 R-ATA-9930216-3 ABI5 [nucleoplasm] R-ATA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9766881 TF network involved in salinity response none Aegilops tauschii AET3Gv20839800 R-ATA-1124453 AET3Gv20839800 [peroxisomal matrix] R-ATA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119407 Ureide biosynthesis none Aegilops tauschii AET3Gv20844700 R-ATA-9928771 AET3Gv20844700 [nucleoplasm] R-ATA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9928831 Severe drought none Aegilops tauschii AET3Gv20847500 R-ATA-9645950 AET3Gv20847500 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET3Gv20847500 R-ATA-9645950 AET3Gv20847500 [nucleoplasm] R-ATA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675782 Maturation none Aegilops tauschii AET3Gv20847500 R-ATA-9645950 AET3Gv20847500 [nucleoplasm] R-ATA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675815 Leading strand synthesis none Aegilops tauschii AET3Gv20847500 R-ATA-9645950 AET3Gv20847500 [nucleoplasm] R-ATA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675824 DNA replication Initiation none Aegilops tauschii AET3Gv20847500 R-ATA-9645950 AET3Gv20847500 [nucleoplasm] R-ATA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675885 Lagging strand synthesis none Aegilops tauschii AET3Gv20848600 R-ATA-9639111 AET3Gv20848600 [plasma membrane] R-ATA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9639136 Response to Aluminum stress none Aegilops tauschii AET3Gv20867000 R-ATA-5149646 AET3Gv20867000 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET3Gv20867000 R-ATA-1126652 AET3Gv20867000 [cytosol] R-ATA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119570 Cytosolic glycolysis none Aegilops tauschii AET3Gv20867300 R-ATA-5149646-2 AET3Gv20867300 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET3Gv20867300 R-ATA-1126652-2 AET3Gv20867300 [cytosol] R-ATA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119570 Cytosolic glycolysis none Aegilops tauschii AET3Gv20874800 R-ATA-1124291-7 AET3Gv20874800 [cytosol] R-ATA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops tauschii AET3Gv20874800 R-ATA-1124291-7 AET3Gv20874800 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET3Gv20874800 R-ATA-1124291-7 AET3Gv20874800 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET3Gv20875000 R-ATA-1124291-2 AET3Gv20875000 [cytosol] R-ATA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops tauschii AET3Gv20875000 R-ATA-1124291-2 AET3Gv20875000 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET3Gv20875000 R-ATA-1124291-2 AET3Gv20875000 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET3Gv20884500 R-ATA-9675297 AET3Gv20884500 [mitochondrion] R-ATA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030654 Primary root development none Aegilops tauschii AET3Gv20885800 R-ATA-9639789 AET3Gv20885800 [plasma membrane] R-ATA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9639861 Development of root hair none Aegilops tauschii AET3Gv20902200 R-ATA-1124242 AET3Gv20902200 [plastid stroma] R-ATA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119464 Methylerythritol phosphate pathway none Aegilops tauschii AET3Gv20906700 R-ATA-9675790 AET3Gv20906700 [nucleoplasm] R-ATA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675824 DNA replication Initiation none Aegilops tauschii AET3Gv20907900 R-ATA-9930308 SNAC2 (OsNAC6) [nucleoplasm] R-ATA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9766881 TF network involved in salinity response none Aegilops tauschii AET3Gv20909900 R-ATA-1124291 AET3Gv20909900 [cytosol] R-ATA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops tauschii AET3Gv20909900 R-ATA-1124291 AET3Gv20909900 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET3Gv20909900 R-ATA-1124291 AET3Gv20909900 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET3Gv20947500 R-ATA-1124348 AET3Gv20947500 [cytosol] R-ATA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119465 Sucrose biosynthesis none Aegilops tauschii AET3Gv20955400 R-ATA-9675500 AET3Gv20955400 [endoplasmic reticulum membrane] R-ATA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030654 Primary root development none Aegilops tauschii AET3Gv20965000 R-ATA-8934185-2 AET3Gv20965000 [nucleoplasm] R-ATA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934108 Short day regulated expression of florigens none Aegilops tauschii AET3Gv20979200 R-ATA-1123690 AET3Gv20979200 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET3Gv20979400 R-ATA-1125452 AET3Gv20979400 [cytosol] R-ATA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119273 Lysine biosynthesis I none Aegilops tauschii AET3Gv20979400 R-ATA-1125452 AET3Gv20979400 [cytosol] R-ATA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119283 Lysine biosynthesis II none Aegilops tauschii AET3Gv20979400 R-ATA-1125452 AET3Gv20979400 [cytosol] R-ATA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119295 Homoserine biosynthesis none Aegilops tauschii AET3Gv20979400 R-ATA-5606511 AET3Gv20979400 [plastid stroma] R-ATA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119419 Lysine biosynthesis VI none Aegilops tauschii AET3Gv20981900 R-ATA-9025492 AET3Gv20981900 [endoplasmic reticulum membrane] R-ATA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119325 Sphingolipid metabolism none Aegilops tauschii AET3Gv20981900 R-ATA-1126933 AET3Gv20981900 [cytosol] R-ATA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119610 Biotin biosynthesis II none Aegilops tauschii AET3Gv20984700 R-ATA-1123561-2 AET3Gv20984700 [cytosol] R-ATA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119624 Methionine salvage pathway none Aegilops tauschii AET3Gv20985700 R-ATA-1126955 AET3Gv20985700 [plastid] R-ATA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119407 Ureide biosynthesis none Aegilops tauschii AET3Gv20994900 R-ATA-1123690-2 AET3Gv20994900 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET3Gv21039900 R-ATA-1123860 AET3Gv21039900 [cytosol] R-ATA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119292 Cytokinins 7-N-glucoside biosynthesis none Aegilops tauschii AET3Gv21039900 R-ATA-1123860 AET3Gv21039900 [cytosol] R-ATA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119375 Cytokinins 9-N-glucoside biosynthesis none Aegilops tauschii AET3Gv21039900 R-ATA-1123860 AET3Gv21039900 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET3Gv21084200 R-ATA-1125570 AET3Gv21084200 [cytosol] R-ATA-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119450 Homocysteine biosynthesis none Aegilops tauschii AET3Gv21099000 R-ATA-1127928 AET3Gv21099000 [cytosol] R-ATA-1119595 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119595 Mannose degradation none Aegilops tauschii AET3Gv21099000 R-ATA-1127928 AET3Gv21099000 [cytosol] R-ATA-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119601 Trehalose degradation II none Aegilops tauschii AET3Gv21099000 R-ATA-1127928 AET3Gv21099000 [cytosol] R-ATA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119628 GDP-mannose metabolism none Aegilops tauschii AET3Gv21114300 R-ATA-5631958 AET3Gv21114300 [cytosol] R-ATA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119289 Arginine degradation none Aegilops tauschii AET3Gv21114300 R-ATA-1122345 AET3Gv21114300 [cytosol] R-ATA-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119318 Proline biosynthesis V (from arginine) none Aegilops tauschii AET3Gv21114300 R-ATA-1122345 AET3Gv21114300 [cytosol] R-ATA-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119631 Proline biosynthesis I none Aegilops tauschii AET3Gv21118800 R-ATA-1123867 AET3Gv21118800 [cytosol] R-ATA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119370 Sterol biosynthesis none Aegilops tauschii AET3Gv21124600 R-ATA-1125755 AET3Gv21124600 [cytosol] R-ATA-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Aegilops tauschii AET3Gv21157200 R-ATA-1122287-12 AET3Gv21157200 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET3Gv21170200 R-ATA-1126488 AET3Gv21170200 [mitochondrial inner membrane] R-ATA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119402 Phospholipid biosynthesis I none Aegilops tauschii AET3Gv21186800 R-ATA-1128396-2 AET3Gv21186800 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET3Gv21187200 R-ATA-1128396 AET3Gv21187200 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET3Gv21203100 R-ATA-8858194 AET3Gv21203100 [cytosol] R-ATA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119556 Choline biosynthesis I none Aegilops tauschii AET3Gv21210700 R-ATA-1122843-2 AET3Gv21210700 [cytosol] R-ATA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119458 Glutamate degradation none Aegilops tauschii AET3Gv21215700 R-ATA-1126436-2 AET3Gv21215700 [cytosol] R-ATA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119615 Mevalonate pathway none Aegilops tauschii AET3Gv21221200 R-ATA-1124560 AET3Gv21221200 [cytosol] R-ATA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119563 UDP-D-xylose biosynthesis none Aegilops tauschii AET3Gv21221200 R-ATA-9681903 AET3Gv21221200 [Golgi lumen] R-ATA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops tauschii AET3Gv21221200 R-ATA-1124560 AET3Gv21221200 [cytosol] R-ATA-5654894 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5654894 UDP-D-apiose biosynthesis none Aegilops tauschii AET3Gv21227200 R-ATA-8868990 AET3Gv21227200 [endoplasmic reticulum membrane] R-ATA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8868949 Intracellular auxin transport none Aegilops tauschii AET3Gv21234700 R-ATA-9766887 AET3Gv21234700 [nucleoplasm] R-ATA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9766881 TF network involved in salinity response none Aegilops tauschii AET3Gv21247200 R-ATA-9609608 AET3Gv21247200 [cytosol] R-ATA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609573 Tricin biosynthesis none Aegilops tauschii AET3Gv21247200 R-ATA-9916171 OsOMT [cytosol] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET3Gv21247200 R-ATA-9916312 OsOMT [nucleoplasm] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET3Gv21254900 R-ATA-1122373-3 AET3Gv21254900 [cytosol] R-ATA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119304 Putrescine biosynthesis II none Aegilops tauschii AET3Gv21254900 R-ATA-1122373-3 AET3Gv21254900 [cytosol] R-ATA-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119447 Putrescine biosynthesis I none Aegilops tauschii AET4Gv20001800 R-ATA-6787144 AET4Gv20001800 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET4Gv20007700 R-ATA-1129078-3 AET4Gv20007700 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET4Gv20007800 R-ATA-1129078 AET4Gv20007800 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET4Gv20029500 R-ATA-6788149 AET4Gv20029500 [cytosol] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET4Gv20029800 R-ATA-9025728-2 AET4Gv20029800 [plasma membrane] R-ATA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9025727 Iron uptake and transport in root vascular system none Aegilops tauschii AET4Gv20030000 R-ATA-9622269 AET4Gv20030000 [plasma membrane] R-ATA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9035605 Regulation of seed size none Aegilops tauschii AET4Gv20042400 R-ATA-6787127 AET4Gv20042400 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET4Gv20042400 R-ATA-6787052 AET4Gv20042400 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET4Gv20057500 R-ATA-1126996 AET4Gv20057500 [cytosol] R-ATA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119316 Phenylpropanoid biosynthesis none Aegilops tauschii AET4Gv20075700 R-ATA-1124285 AET4Gv20075700 [cytosol] R-ATA-1119284 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119284 Coumarin biosynthesis (via 2-coumarate) none Aegilops tauschii AET4Gv20079600 R-ATA-5654829 AET4Gv20079600 [nucleoplasm] R-ATA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Aegilops tauschii AET4Gv20081300 R-ATA-1126513 AET4Gv20081300 [cytosol] R-ATA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119332 Jasmonic acid biosynthesis none Aegilops tauschii AET4Gv20092700 R-ATA-5632316 AET4Gv20092700 [cytosol] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET4Gv20094300 R-ATA-1128632 AET4Gv20094300 [cytosol] R-ATA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119465 Sucrose biosynthesis none Aegilops tauschii AET4Gv20094300 R-ATA-1128632 AET4Gv20094300 [cytosol] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET4Gv20094400 R-ATA-1125564 AET4Gv20094400 [cytosol] R-ATA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119291 Nitrate assimilation none Aegilops tauschii AET4Gv20094400 R-ATA-1125564 AET4Gv20094400 [cytosol] R-ATA-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119293 Glutamine biosynthesis I none Aegilops tauschii AET4Gv20094400 R-ATA-1125564 AET4Gv20094400 [cytosol] R-ATA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119443 Ammonia assimilation cycle none Aegilops tauschii AET4Gv20097000 R-ATA-1127031 AET4Gv20097000 [cytosol] R-ATA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119460 Isoleucine biosynthesis from threonine none Aegilops tauschii AET4Gv20103800 R-ATA-1125460-2 AET4Gv20103800 [cytosol] R-ATA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119452 Galactose degradation II none Aegilops tauschii AET4Gv20103800 R-ATA-1125460-2 AET4Gv20103800 [cytosol] R-ATA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119563 UDP-D-xylose biosynthesis none Aegilops tauschii AET4Gv20103800 R-ATA-1125460-2 AET4Gv20103800 [cytosol] R-ATA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops tauschii AET4Gv20107700 R-ATA-8933842 AET4Gv20107700 [cytosol] R-ATA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8933811 Circadian rhythm none Aegilops tauschii AET4Gv20107700 R-ATA-8933843 AET4Gv20107700 [nucleoplasm] R-ATA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8933811 Circadian rhythm none Aegilops tauschii AET4Gv20118200 R-ATA-9927759 AET4Gv20118200 [nucleoplasm] R-ATA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934036 Long day regulated expression of florigens none Aegilops tauschii AET4Gv20118700 R-ATA-9639012 AET4Gv20118700 [cytosol] R-ATA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119434 Phytic acid biosynthesis (lipid-independent) none Aegilops tauschii AET4Gv20120200 R-ATA-9631619 AET4Gv20120200 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET4Gv20120600 R-ATA-1123895 AET4Gv20120600 [cytosol] R-ATA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119334 Ethylene biosynthesis from methionine none Aegilops tauschii AET4Gv20120600 R-ATA-1123895 AET4Gv20120600 [cytosol] R-ATA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119624 Methionine salvage pathway none Aegilops tauschii AET4Gv20124900 R-ATA-9035593 AET4Gv20124900 [cytosol] R-ATA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9035605 Regulation of seed size none Aegilops tauschii AET4Gv20124900 R-ATA-9035634 AET4Gv20124900 [nucleoplasm] R-ATA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9035605 Regulation of seed size none Aegilops tauschii AET4Gv20124900 R-ATA-9035593 AET4Gv20124900 [cytosol] R-ATA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9608575 Reproductive meristem phase change none Aegilops tauschii AET4Gv20124900 R-ATA-9035634 AET4Gv20124900 [nucleoplasm] R-ATA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9608575 Reproductive meristem phase change none Aegilops tauschii AET4Gv20129800 R-ATA-1128745 AET4Gv20129800 [plastid stroma] R-ATA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119464 Methylerythritol phosphate pathway none Aegilops tauschii AET4Gv20132100 R-ATA-9035785 AET4Gv20132100 [nucleoplasm] R-ATA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9608575 Reproductive meristem phase change none Aegilops tauschii AET4Gv20133900 R-ATA-6786984 AET4Gv20133900 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET4Gv20133900 R-ATA-6787051 AET4Gv20133900 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET4Gv20139100 R-ATA-1125341 AET4Gv20139100 [cytosol] R-ATA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119460 Isoleucine biosynthesis from threonine none Aegilops tauschii AET4Gv20139100 R-ATA-1125341 AET4Gv20139100 [cytosol] R-ATA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119600 Valine biosynthesis none Aegilops tauschii AET4Gv20139500 R-ATA-9640783 AET4Gv20139500 [nucleoplasm] R-ATA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640760 G1 phase none Aegilops tauschii AET4Gv20142100 R-ATA-8987575 AET4Gv20142100 [mitochondrial matrix] R-ATA-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119311 Glycine biosynthesis I none Aegilops tauschii AET4Gv20145000 R-ATA-1123470 AET4Gv20145000 [cytosol] R-ATA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119292 Cytokinins 7-N-glucoside biosynthesis none Aegilops tauschii AET4Gv20145000 R-ATA-1123470 AET4Gv20145000 [cytosol] R-ATA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119375 Cytokinins 9-N-glucoside biosynthesis none Aegilops tauschii AET4Gv20145000 R-ATA-1123470 AET4Gv20145000 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET4Gv20159700 R-ATA-9681869 AET4Gv20159700 [cytosol] R-ATA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops tauschii AET4Gv20163600 R-ATA-1129390 AET4Gv20163600 [mitochondrion] R-ATA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119506 tyrosine degradation I none Aegilops tauschii AET4Gv20165300 R-ATA-4415055 AET4Gv20165300 [cytosol] R-ATA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-3899351 Abscisic acid (ABA) mediated signaling none Aegilops tauschii AET4Gv20165300 R-ATA-4415073 phospho-AET4Gv20165300 [cytosol] R-ATA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-3899351 Abscisic acid (ABA) mediated signaling none Aegilops tauschii AET4Gv20165300 R-ATA-4415055 AET4Gv20165300 [cytosol] R-ATA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9639861 Development of root hair none Aegilops tauschii AET4Gv20167600 R-ATA-5138500 AET4Gv20167600 [plastid stroma] R-ATA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119263 Arginine biosynthesis none Aegilops tauschii AET4Gv20167600 R-ATA-1129397 AET4Gv20167600 [cytosol] R-ATA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119273 Lysine biosynthesis I none Aegilops tauschii AET4Gv20167600 R-ATA-1129397 AET4Gv20167600 [cytosol] R-ATA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119283 Lysine biosynthesis II none Aegilops tauschii AET4Gv20167600 R-ATA-1129397 AET4Gv20167600 [cytosol] R-ATA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119295 Homoserine biosynthesis none Aegilops tauschii AET4Gv20167600 R-ATA-5138500 AET4Gv20167600 [plastid stroma] R-ATA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119539 Ornithine biosynthesis none Aegilops tauschii AET4Gv20167600 R-ATA-5138500 AET4Gv20167600 [plastid stroma] R-ATA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119622 Arginine biosynthesis II (acetyl cycle) none Aegilops tauschii AET4Gv20203400 R-ATA-9675807 AET4Gv20203400 [nucleoplasm] R-ATA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675782 Maturation none Aegilops tauschii AET4Gv20203400 R-ATA-9675807 AET4Gv20203400 [nucleoplasm] R-ATA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675815 Leading strand synthesis none Aegilops tauschii AET4Gv20203400 R-ATA-9675807 AET4Gv20203400 [nucleoplasm] R-ATA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675885 Lagging strand synthesis none Aegilops tauschii AET4Gv20205600 R-ATA-9645941 AET4Gv20205600 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET4Gv20206500 R-ATA-6788234 AET4Gv20206500 [cytosol] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET4Gv20206500 R-ATA-1124041 AET4Gv20206500 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET4Gv20222600 R-ATA-1122242-3 AET4Gv20222600 [cytosol] R-ATA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119267 Phenylalanine degradation III none Aegilops tauschii AET4Gv20226400 R-ATA-5084918 AET4Gv20226400 [cytosol] R-ATA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119624 Methionine salvage pathway none Aegilops tauschii AET4Gv20227900 R-ATA-1125307 AET4Gv20227900 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET4Gv20231800 R-ATA-1123855 AET4Gv20231800 [plastid] R-ATA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119407 Ureide biosynthesis none Aegilops tauschii AET4Gv20244200 R-ATA-9681886 AET4Gv20244200 [cytosol] R-ATA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops tauschii AET4Gv20248700 R-ATA-9684771-2 AET4Gv20248700 [cytosol] R-ATA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609102 Flower development none Aegilops tauschii AET4Gv20265700 R-ATA-9645907-2 AET4Gv20265700 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET4Gv20265700 R-ATA-9645907-2 AET4Gv20265700 [nucleoplasm] R-ATA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675824 DNA replication Initiation none Aegilops tauschii AET4Gv20268800 R-ATA-1126593 AET4Gv20268800 [endosome] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET4Gv20268800 R-ATA-5679293 AET4Gv20268800 [plasma membrane] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET4Gv20268800 R-ATA-8858098 AET4Gv20268800 [plasma membrane] R-ATA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8858053 Polar auxin transport none Aegilops tauschii AET4Gv20269800 R-ATA-9025698 AET4Gv20269800 [plasma membrane] R-ATA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9025727 Iron uptake and transport in root vascular system none Aegilops tauschii AET4Gv20278300 R-ATA-6788085 AET4Gv20278300 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET4Gv20279600 R-ATA-5654797-2 AET4Gv20279600 [nucleoplasm] R-ATA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5654828 Strigolactone signaling none Aegilops tauschii AET4Gv20279700 R-ATA-1125804-2 AET4Gv20279700 [cytosol] R-ATA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119300 Glycolipid desaturation none Aegilops tauschii AET4Gv20286700 R-ATA-1127539 AET4Gv20286700 [cytosol] R-ATA-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Aegilops tauschii AET4Gv20286700 R-ATA-1127539 AET4Gv20286700 [cytosol] R-ATA-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119439 Cholesterol biosynthesis III (via desmosterol) none Aegilops tauschii AET4Gv20286700 R-ATA-1127539 AET4Gv20286700 [cytosol] R-ATA-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119559 Cholesterol biosynthesis I none Aegilops tauschii AET4Gv20332200 R-ATA-9658729 AET4Gv20332200 [cytosol] R-ATA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119389 Phenylalanine biosynthesis I none Aegilops tauschii AET4Gv20332200 R-ATA-9658729 AET4Gv20332200 [cytosol] R-ATA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119506 tyrosine degradation I none Aegilops tauschii AET4Gv20348200 R-ATA-9682481 AET4Gv20348200 [cytosol] R-ATA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119410 Ascorbate biosynthesis none Aegilops tauschii AET4Gv20348200 R-ATA-9682481 AET4Gv20348200 [cytosol] R-ATA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119628 GDP-mannose metabolism none Aegilops tauschii AET4Gv20350900 R-ATA-5632114 AET4Gv20350900 [cytosol] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET4Gv20371900 R-ATA-9640734 AET4Gv20371900 [nucleoplasm] R-ATA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640887 G1/S transition none Aegilops tauschii AET4Gv20371900 R-ATA-9640881 phospho-AET4Gv20371900 [nucleoplasm] R-ATA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640887 G1/S transition none Aegilops tauschii AET4Gv20391400 R-ATA-1128534 AET4Gv20391400 [cytosol] R-ATA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119437 Glutathione redox reactions I none Aegilops tauschii AET4Gv20399700 R-ATA-9681910 AET4Gv20399700 [Golgi membrane] R-ATA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops tauschii AET4Gv20403800 R-ATA-9639016 AET4Gv20403800 [cytosol] R-ATA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119410 Ascorbate biosynthesis none Aegilops tauschii AET4Gv20403800 R-ATA-9639016 AET4Gv20403800 [cytosol] R-ATA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119434 Phytic acid biosynthesis (lipid-independent) none Aegilops tauschii AET4Gv20444900 R-ATA-1126115 AET4Gv20444900 [cytosol] R-ATA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119452 Galactose degradation II none Aegilops tauschii AET4Gv20444900 R-ATA-1126115 AET4Gv20444900 [cytosol] R-ATA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119465 Sucrose biosynthesis none Aegilops tauschii AET4Gv20446200 R-ATA-1126830 AET4Gv20446200 [mitochondrial matrix] R-ATA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119533 TCA cycle (plant) none Aegilops tauschii AET4Gv20446400 R-ATA-1126444 AET4Gv20446400 [cytosol] R-ATA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119610 Biotin biosynthesis II none Aegilops tauschii AET4Gv20451900 R-ATA-6787213 AET4Gv20451900 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET4Gv20459600 R-ATA-9930276 AET4Gv20459600 [nucleoplasm] R-ATA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9766881 TF network involved in salinity response none Aegilops tauschii AET4Gv20460500 R-ATA-9924413 WOX6 [nucleoplasm] R-ATA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops tauschii AET4Gv20462200 R-ATA-6787084 AET4Gv20462200 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET4Gv20464700 R-ATA-9826700 AET4Gv20464700 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET4Gv20469800 R-ATA-6788172 AET4Gv20469800 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET4Gv20471800 R-ATA-9031290 AET4Gv20471800 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET4Gv20479600 R-ATA-8933856 AET4Gv20479600 [nucleoplasm] R-ATA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8933811 Circadian rhythm none Aegilops tauschii AET4Gv20479600 R-ATA-8933748 AET4Gv20479600 [cytosol] R-ATA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8933811 Circadian rhythm none Aegilops tauschii AET4Gv20479600 R-ATA-8933856 AET4Gv20479600 [nucleoplasm] R-ATA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934036 Long day regulated expression of florigens none Aegilops tauschii AET4Gv20479600 R-ATA-8933856 AET4Gv20479600 [nucleoplasm] R-ATA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9928995 Drought escape (DE) via ABA-dependent pathway none Aegilops tauschii AET4Gv20483300 R-ATA-9025712 AET4Gv20483300 [cytosol] R-ATA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9025754 Mugineic acid biosynthesis none Aegilops tauschii AET4Gv20485400 R-ATA-5655092 AET4Gv20485400 [Golgi lumen] R-ATA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5655101 Xyloglucan biosynthesis none Aegilops tauschii AET4Gv20485700 R-ATA-5655071 AET4Gv20485700 [Golgi lumen] R-ATA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5655101 Xyloglucan biosynthesis none Aegilops tauschii AET4Gv20492900 R-ATA-9639810 AET4Gv20492900 [cell wall] R-ATA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9639861 Development of root hair none Aegilops tauschii AET4Gv20493100 R-ATA-5606478-2 AET4Gv20493100 [plastid stroma] R-ATA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119419 Lysine biosynthesis VI none Aegilops tauschii AET4Gv20503400 R-ATA-9025294 AET4Gv20503400 [cytosol] R-ATA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119267 Phenylalanine degradation III none Aegilops tauschii AET4Gv20503400 R-ATA-1123342 AET4Gv20503400 [cytosol] R-ATA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119460 Isoleucine biosynthesis from threonine none Aegilops tauschii AET4Gv20503400 R-ATA-1123342 AET4Gv20503400 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET4Gv20503400 R-ATA-1123342 AET4Gv20503400 [cytosol] R-ATA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119600 Valine biosynthesis none Aegilops tauschii AET4Gv20505300 R-ATA-1128279 AET4Gv20505300 [cytosol] R-ATA-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119354 Asparagine biosynthesis III none Aegilops tauschii AET4Gv20505300 R-ATA-1128279 AET4Gv20505300 [cytosol] R-ATA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119553 Asparagine biosynthesis none Aegilops tauschii AET4Gv20505800 R-ATA-1129351 AET4Gv20505800 [cytosol] R-ATA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119300 Glycolipid desaturation none Aegilops tauschii AET4Gv20511400 R-ATA-1126138 AET4Gv20511400 [cytosol] R-ATA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119389 Phenylalanine biosynthesis I none Aegilops tauschii AET4Gv20512200 R-ATA-1127140 AET4Gv20512200 [cytosol] R-ATA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119403 Removal of superoxide radicals none Aegilops tauschii AET4Gv20512600 R-ATA-9675423 AET4Gv20512600 [nucleoplasm] R-ATA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675508 Root elongation none Aegilops tauschii AET4Gv20512600 R-ATA-9930290 MPK5 [nucleoplasm] R-ATA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9766881 TF network involved in salinity response none Aegilops tauschii AET4Gv20515100 R-ATA-9025230 AET4Gv20515100 [peroxisomal matrix] R-ATA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119407 Ureide biosynthesis none Aegilops tauschii AET4Gv20515300 R-ATA-1130032 AET4Gv20515300 [mitochondrial inner membrane] R-ATA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119260 Cardiolipin biosynthesis none Aegilops tauschii AET4Gv20522000 R-ATA-9658613 AET4Gv20522000 [plastid stroma] R-ATA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119263 Arginine biosynthesis none Aegilops tauschii AET4Gv20522000 R-ATA-9658613 AET4Gv20522000 [plastid stroma] R-ATA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119622 Arginine biosynthesis II (acetyl cycle) none Aegilops tauschii AET4Gv20525100 R-ATA-1125259 AET4Gv20525100 [cytosol] R-ATA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119428 GDP-D-rhamnose biosynthesis none Aegilops tauschii AET4Gv20525100 R-ATA-1125259 AET4Gv20525100 [cytosol] R-ATA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops tauschii AET4Gv20525200 R-ATA-1126799 AET4Gv20525200 [cytosol] R-ATA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119428 GDP-D-rhamnose biosynthesis none Aegilops tauschii AET4Gv20525200 R-ATA-1126799 AET4Gv20525200 [cytosol] R-ATA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119563 UDP-D-xylose biosynthesis none Aegilops tauschii AET4Gv20525200 R-ATA-1126799 AET4Gv20525200 [cytosol] R-ATA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops tauschii AET4Gv20536900 R-ATA-4415078 AET4Gv20536900 [cytosol] R-ATA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-3899351 Abscisic acid (ABA) mediated signaling none Aegilops tauschii AET4Gv20539600 R-ATA-1127082 AET4Gv20539600 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET4Gv20544800 R-ATA-6787198 AET4Gv20544800 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET4Gv20546600 R-ATA-1123998 AET4Gv20546600 [chloroplast] R-ATA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119494 Tryptophan biosynthesis none Aegilops tauschii AET4Gv20546800 R-ATA-9025430 AET4Gv20546800 [endoplasmic reticulum membrane] R-ATA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119325 Sphingolipid metabolism none Aegilops tauschii AET4Gv20548000 R-ATA-1125989 AET4Gv20548000 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET4Gv20549700 R-ATA-9626449 AET4Gv20549700 [cytosol] R-ATA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9626305 Regulatory network of nutrient accumulation none Aegilops tauschii AET4Gv20560200 R-ATA-1130456 AET4Gv20560200 [plastid stroma] R-ATA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119430 Chorismate biosynthesis none Aegilops tauschii AET4Gv20560300 R-ATA-5632157 AET4Gv20560300 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET4Gv20560300 R-ATA-5632157 AET4Gv20560300 [nucleoplasm] R-ATA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5654828 Strigolactone signaling none Aegilops tauschii AET4Gv20562100 R-ATA-9025453 AET4Gv20562100 [endoplasmic reticulum membrane] R-ATA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119325 Sphingolipid metabolism none Aegilops tauschii AET4Gv20565200 R-ATA-1126421 AET4Gv20565200 [cytosol] R-ATA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119428 GDP-D-rhamnose biosynthesis none Aegilops tauschii AET4Gv20565200 R-ATA-1126421 AET4Gv20565200 [cytosol] R-ATA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops tauschii AET4Gv20571500 R-ATA-1125870 AET4Gv20571500 [cytosol] R-ATA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119273 Lysine biosynthesis I none Aegilops tauschii AET4Gv20571500 R-ATA-1125870 AET4Gv20571500 [cytosol] R-ATA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119283 Lysine biosynthesis II none Aegilops tauschii AET4Gv20571500 R-ATA-5606480 AET4Gv20571500 [plastid stroma] R-ATA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119419 Lysine biosynthesis VI none Aegilops tauschii AET4Gv20592900 R-ATA-9639049 AET4Gv20592900 [cytosol] R-ATA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119434 Phytic acid biosynthesis (lipid-independent) none Aegilops tauschii AET4Gv20593400 R-ATA-1122974 AET4Gv20593400 [mitochondrial matrix] R-ATA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119479 Valine degradation none Aegilops tauschii AET4Gv20598400 R-ATA-1125556-3 AET4Gv20598400 [cytosol] R-ATA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119410 Ascorbate biosynthesis none Aegilops tauschii AET4Gv20598400 R-ATA-1125556-3 AET4Gv20598400 [cytosol] R-ATA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119628 GDP-mannose metabolism none Aegilops tauschii AET4Gv20599100 R-ATA-1128804 AET4Gv20599100 [cytosol] R-ATA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119516 Trehalose biosynthesis I none Aegilops tauschii AET4Gv20604700 R-ATA-1129111 AET4Gv20604700 [cytosol] R-ATA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119349 S-methylmethionine cycle none Aegilops tauschii AET4Gv20604700 R-ATA-1129111 AET4Gv20604700 [cytosol] R-ATA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119400 Methionine biosynthesis II none Aegilops tauschii AET4Gv20613200 R-ATA-9645944 AET4Gv20613200 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET4Gv20640700 R-ATA-5654859 AET4Gv20640700 [nucleoplasm] R-ATA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5654828 Strigolactone signaling none Aegilops tauschii AET4Gv20640700 R-ATA-5654859 AET4Gv20640700 [nucleoplasm] R-ATA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Aegilops tauschii AET4Gv20646800 R-ATA-9826620 HOX12/ OsGT1 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET4Gv20646800 R-ATA-9826620 HOX12/ OsGT1 [nucleoplasm] R-ATA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Aegilops tauschii AET4Gv20650200 R-ATA-1127723 AET4Gv20650200 [cytosol] R-ATA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119331 Cysteine biosynthesis I none Aegilops tauschii AET4Gv20652300 R-ATA-5606521 AET4Gv20652300 [plastid stroma] R-ATA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119419 Lysine biosynthesis VI none Aegilops tauschii AET4Gv20654900 R-ATA-9658681 AET4Gv20654900 [plasma membrane] R-ATA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119567 Beta-alanine biosynthesis I none Aegilops tauschii AET4Gv20656900 R-ATA-1129964 AET4Gv20656900 [cytosol] R-ATA-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119378 Myo-inositol biosynthesis none Aegilops tauschii AET4Gv20656900 R-ATA-1129964 AET4Gv20656900 [cytosol] R-ATA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119434 Phytic acid biosynthesis (lipid-independent) none Aegilops tauschii AET4Gv20666300 R-ATA-9916247-4 OsEXPA19 [extracellular region] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET4Gv20666300 R-ATA-9916296-4 OsEXPA20 [extracellular region] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET4Gv20668200 R-ATA-9916247-3 OsEXPA19 [extracellular region] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET4Gv20668200 R-ATA-9916296-3 OsEXPA20 [extracellular region] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET4Gv20668400 R-ATA-9916247 OsEXPA19 [extracellular region] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET4Gv20668400 R-ATA-9916296 OsEXPA20 [extracellular region] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET4Gv20678400 R-ATA-9924379 HSFA2D [nucleoplasm] R-ATA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops tauschii AET4Gv20688200 R-ATA-9658656 AET4Gv20688200 [cytosol] R-ATA-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119271 Threonine degradation none Aegilops tauschii AET4Gv20688200 R-ATA-9658656 AET4Gv20688200 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET4Gv20688200 R-ATA-9658656 AET4Gv20688200 [cytosol] R-ATA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119567 Beta-alanine biosynthesis I none Aegilops tauschii AET4Gv20688600 R-ATA-8986767 AET4Gv20688600 [plastid] R-ATA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8986768 Anther and pollen development none Aegilops tauschii AET4Gv20688700 R-ATA-5632205 AET4Gv20688700 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET4Gv20694000 R-ATA-1122934 AET4Gv20694000 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET4Gv20702100 R-ATA-1129879 AET4Gv20702100 [cytosol] R-ATA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119436 Peptidoglycan biosynthesis I none Aegilops tauschii AET4Gv20713600 R-ATA-1123433 AET4Gv20713600 [cytosol] R-ATA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119332 Jasmonic acid biosynthesis none Aegilops tauschii AET4Gv20713600 R-ATA-1123433 AET4Gv20713600 [cytosol] R-ATA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119618 13-LOX and 13-HPL pathway none Aegilops tauschii AET4Gv20717600 R-ATA-6786958 AET4Gv20717600 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET4Gv20717600 R-ATA-6787234 AET4Gv20717600 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET4Gv20717800 R-ATA-6787180 AET4Gv20717800 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET4Gv20717800 R-ATA-6787152 AET4Gv20717800 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET4Gv20718500 R-ATA-5683263 AET4Gv20718500 [cytosol] R-ATA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119586 Cyanate degradation none Aegilops tauschii AET4Gv20725500 R-ATA-5654911 AET4Gv20725500 [Golgi lumen] R-ATA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5654909 Xylan biosynthesis none Aegilops tauschii AET4Gv20726000 R-ATA-9640701 AET4Gv20726000 [nucleoplasm] R-ATA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640882 Assembly of pre-replication complex none Aegilops tauschii AET4Gv20726000 R-ATA-9640701 AET4Gv20726000 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET4Gv20727400 R-ATA-4827040 AET4Gv20727400 [plastid stroma] R-ATA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-4827054 Tetrapyrrole biosynthesis I none Aegilops tauschii AET4Gv20730000 R-ATA-5608140 AET4Gv20730000 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET4Gv20730800 R-ATA-9826680 AET4Gv20730800 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET4Gv20733600 R-ATA-1122295-2 AET4Gv20733600 [cytosol] R-ATA-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119353 Linear furanocoumarin biosynthesis none Aegilops tauschii AET4Gv20740200 R-ATA-5655057 AET4Gv20740200 [Golgi lumen] R-ATA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5655101 Xyloglucan biosynthesis none Aegilops tauschii AET4Gv20749200 R-ATA-9639211 AET4Gv20749200 [plant-type vacuole membrane] R-ATA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9639136 Response to Aluminum stress none Aegilops tauschii AET4Gv20753500 R-ATA-1124065 AET4Gv20753500 [cytosol] R-ATA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops tauschii AET4Gv20757400 R-ATA-1126238 AET4Gv20757400 [chloroplast] R-ATA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119494 Tryptophan biosynthesis none Aegilops tauschii AET4Gv20761800 R-ATA-9675876 AET4Gv20761800 [nucleoplasm] R-ATA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675782 Maturation none Aegilops tauschii AET4Gv20761800 R-ATA-9675876 AET4Gv20761800 [nucleoplasm] R-ATA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675815 Leading strand synthesis none Aegilops tauschii AET4Gv20761800 R-ATA-9675876 AET4Gv20761800 [nucleoplasm] R-ATA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675885 Lagging strand synthesis none Aegilops tauschii AET4Gv20763800 R-ATA-1126728 AET4Gv20763800 [plastid stroma] R-ATA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119424 Plastid glycolysis none Aegilops tauschii AET4Gv20768300 R-ATA-6787009-2 AET4Gv20768300 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET4Gv20768600 R-ATA-6787009 AET4Gv20768600 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET4Gv20774400 R-ATA-5632232 phospho-AET4Gv20774400 [plasma membrane] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET4Gv20774800 R-ATA-9025698-2 AET4Gv20774800 [plasma membrane] R-ATA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9025727 Iron uptake and transport in root vascular system none Aegilops tauschii AET4Gv20776100 R-ATA-9611526 CEBiP [plasma membrane] R-ATA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops tauschii AET4Gv20777800 R-ATA-1128641 AET4Gv20777800 [cytosol] R-ATA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119331 Cysteine biosynthesis I none Aegilops tauschii AET4Gv20778000 R-ATA-1128263 AET4Gv20778000 [plastid stroma] R-ATA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119509 Histidine biosynthesis I none Aegilops tauschii AET4Gv20780900 R-ATA-1127899 AET4Gv20780900 [cytosol] R-ATA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119370 Sterol biosynthesis none Aegilops tauschii AET4Gv20784000 R-ATA-1130136 AET4Gv20784000 [mitochondrial matrix] R-ATA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119533 TCA cycle (plant) none Aegilops tauschii AET4Gv20784000 R-ATA-1130136 AET4Gv20784000 [mitochondrial matrix] R-ATA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119540 Leucine biosynthesis none Aegilops tauschii AET4Gv20787600 R-ATA-9639211-3 AET4Gv20787600 [plant-type vacuole membrane] R-ATA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9639136 Response to Aluminum stress none Aegilops tauschii AET4Gv20788100 R-ATA-9640687 AET4Gv20788100 [nucleoplasm] R-ATA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640760 G1 phase none Aegilops tauschii AET4Gv20797800 R-ATA-1126307 AET4Gv20797800 [cytosol] R-ATA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119370 Sterol biosynthesis none Aegilops tauschii AET4Gv20809300 R-ATA-8934063 AET4Gv20809300 [nucleoplasm] R-ATA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934036 Long day regulated expression of florigens none Aegilops tauschii AET4Gv20809300 R-ATA-8934063 AET4Gv20809300 [nucleoplasm] R-ATA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934108 Short day regulated expression of florigens none Aegilops tauschii AET4Gv20809300 R-ATA-8934063 AET4Gv20809300 [nucleoplasm] R-ATA-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9928946 Drought escape (DE) via ABA-independent pathway none Aegilops tauschii AET4Gv20816200 R-ATA-8934185 AET4Gv20816200 [nucleoplasm] R-ATA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934108 Short day regulated expression of florigens none Aegilops tauschii AET4Gv20817500 R-ATA-1125610 AET4Gv20817500 [cytosol] R-ATA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119276 Choline biosynthesis III none Aegilops tauschii AET4Gv20818400 R-ATA-1128298-3 AET4Gv20818400 [cytosol] R-ATA-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119271 Threonine degradation none Aegilops tauschii AET4Gv20818400 R-ATA-1128298-3 AET4Gv20818400 [cytosol] R-ATA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119610 Biotin biosynthesis II none Aegilops tauschii AET4Gv20818800 R-ATA-1128328 AET4Gv20818800 [cytosol] R-ATA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119615 Mevalonate pathway none Aegilops tauschii AET4Gv20820100 R-ATA-1126107 AET4Gv20820100 [cytosol] R-ATA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119332 Jasmonic acid biosynthesis none Aegilops tauschii AET4Gv20820100 R-ATA-1126107 AET4Gv20820100 [cytosol] R-ATA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119618 13-LOX and 13-HPL pathway none Aegilops tauschii AET4Gv20821200 R-ATA-1128298-2 AET4Gv20821200 [cytosol] R-ATA-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119271 Threonine degradation none Aegilops tauschii AET4Gv20821200 R-ATA-1128298-2 AET4Gv20821200 [cytosol] R-ATA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119610 Biotin biosynthesis II none Aegilops tauschii AET4Gv20822000 R-ATA-1125834 AET4Gv20822000 [cytosol] R-ATA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119379 Flavin biosynthesis none Aegilops tauschii AET4Gv20822800 R-ATA-1129478 AET4Gv20822800 [cytosol] R-ATA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119273 Lysine biosynthesis I none Aegilops tauschii AET4Gv20822800 R-ATA-1129478 AET4Gv20822800 [cytosol] R-ATA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119283 Lysine biosynthesis II none Aegilops tauschii AET4Gv20822800 R-ATA-5606483 AET4Gv20822800 [plastid stroma] R-ATA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119419 Lysine biosynthesis VI none Aegilops tauschii AET4Gv20823600 R-ATA-9618135 AET4Gv20823600 [plasma membrane] R-ATA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9618218 Arsenic uptake and detoxification none Aegilops tauschii AET4Gv20828800 R-ATA-9607132 RBOHB [plasma membrane] R-ATA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops tauschii AET4Gv20828800 R-ATA-9611529 phospho-phosphorylated-RBOHB [plasma membrane] R-ATA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops tauschii AET4Gv20829500 R-ATA-1126671 AET4Gv20829500 [cytosol] R-ATA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119534 Pyridoxal 5'-phosphate salvage pathway none Aegilops tauschii AET4Gv20829500 R-ATA-1126671 AET4Gv20829500 [cytosol] R-ATA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119594 Pyridoxal 5'-phosphate biosynthesis none Aegilops tauschii AET4Gv20830400 R-ATA-1126636-3 AET4Gv20830400 [cytosol] R-ATA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119370 Sterol biosynthesis none Aegilops tauschii AET4Gv20833000 R-ATA-9618139 AET4Gv20833000 [plasma membrane] R-ATA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9618218 Arsenic uptake and detoxification none Aegilops tauschii AET4Gv20835200 R-ATA-1126113 AET4Gv20835200 [cytosol] R-ATA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119460 Isoleucine biosynthesis from threonine none Aegilops tauschii AET4Gv20835200 R-ATA-1126113 AET4Gv20835200 [cytosol] R-ATA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119496 Pantothenate biosynthesis I none Aegilops tauschii AET4Gv20835200 R-ATA-1126113 AET4Gv20835200 [cytosol] R-ATA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119540 Leucine biosynthesis none Aegilops tauschii AET4Gv20835200 R-ATA-1126113 AET4Gv20835200 [cytosol] R-ATA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119544 Pantothenate biosynthesis II none Aegilops tauschii AET4Gv20838800 R-ATA-1127076 AET4Gv20838800 [cytosol] R-ATA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119418 Suberin biosynthesis none Aegilops tauschii AET4Gv20838800 R-ATA-1127076 AET4Gv20838800 [cytosol] R-ATA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops tauschii AET4Gv20848700 R-ATA-1127338 AET4Gv20848700 [mitochondrial inner membrane] R-ATA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119402 Phospholipid biosynthesis I none Aegilops tauschii AET4Gv20854700 R-ATA-1127170 AET4Gv20854700 [cytosol] R-ATA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119276 Choline biosynthesis III none Aegilops tauschii AET4Gv20866600 R-ATA-1127318-3 AET4Gv20866600 [cytosol] R-ATA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops tauschii AET4Gv20866600 R-ATA-1127318-3 AET4Gv20866600 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET4Gv20866600 R-ATA-1127318-3 AET4Gv20866600 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET4Gv20870100 R-ATA-9025712-4 AET4Gv20870100 [cytosol] R-ATA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9025754 Mugineic acid biosynthesis none Aegilops tauschii AET4Gv20870300 R-ATA-9025712-5 AET4Gv20870300 [cytosol] R-ATA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9025754 Mugineic acid biosynthesis none Aegilops tauschii AET4Gv20872800 R-ATA-5655107 AET4Gv20872800 [Golgi lumen] R-ATA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5655101 Xyloglucan biosynthesis none Aegilops tauschii AET4Gv20874600 R-ATA-5655107-2 AET4Gv20874600 [Golgi lumen] R-ATA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5655101 Xyloglucan biosynthesis none Aegilops tauschii AET4Gv20876100 R-ATA-1125194 AET4Gv20876100 [cytosol] R-ATA-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119484 Folate polyglutamylation II none Aegilops tauschii AET4Gv20876100 R-ATA-1125194 AET4Gv20876100 [cytosol] R-ATA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119523 Tetrahydrofolate biosynthesis II none Aegilops tauschii AET4Gv20876100 R-ATA-1125194 AET4Gv20876100 [cytosol] R-ATA-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119617 Folate polyglutamylation I none Aegilops tauschii AET4Gv20877900 R-ATA-1126996-2 AET4Gv20877900 [cytosol] R-ATA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119316 Phenylpropanoid biosynthesis none Aegilops tauschii AET4Gv20881500 R-ATA-1123150-4 AET4Gv20881500 [cytosol] R-ATA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops tauschii AET4Gv20881500 R-ATA-1123150-4 AET4Gv20881500 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET4Gv20881500 R-ATA-1123150-4 AET4Gv20881500 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET5Gv20004200 R-ATA-9609343 AET5Gv20004200 [cytosol] R-ATA-9609352 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609352 Lycopene catabolism none Aegilops tauschii AET5Gv20005800 R-ATA-1127089 AET5Gv20005800 [cytosol] R-ATA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119465 Sucrose biosynthesis none Aegilops tauschii AET5Gv20006400 R-ATA-9609343-2 AET5Gv20006400 [cytosol] R-ATA-9609352 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609352 Lycopene catabolism none Aegilops tauschii AET5Gv20012700 R-ATA-1126636-5 AET5Gv20012700 [cytosol] R-ATA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119370 Sterol biosynthesis none Aegilops tauschii AET5Gv20012900 R-ATA-1126636-7 AET5Gv20012900 [cytosol] R-ATA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119370 Sterol biosynthesis none Aegilops tauschii AET5Gv20019300 R-ATA-1126636 AET5Gv20019300 [cytosol] R-ATA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119370 Sterol biosynthesis none Aegilops tauschii AET5Gv20019400 R-ATA-1126636-4 AET5Gv20019400 [cytosol] R-ATA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119370 Sterol biosynthesis none Aegilops tauschii AET5Gv20019600 R-ATA-1126636-6 AET5Gv20019600 [cytosol] R-ATA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119370 Sterol biosynthesis none Aegilops tauschii AET5Gv20023600 R-ATA-1126971-3 AET5Gv20023600 [cytosol] R-ATA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119332 Jasmonic acid biosynthesis none Aegilops tauschii AET5Gv20023600 R-ATA-1126971-3 AET5Gv20023600 [cytosol] R-ATA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119618 13-LOX and 13-HPL pathway none Aegilops tauschii AET5Gv20039200 R-ATA-8879061 LOS2 homolog [nucleoplasm] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET5Gv20039700 R-ATA-8879061-2 LOS2 homolog [nucleoplasm] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET5Gv20045400 R-ATA-9626337 AET5Gv20045400 [Golgi-associated vesicle] R-ATA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9626305 Regulatory network of nutrient accumulation none Aegilops tauschii AET5Gv20060100 R-ATA-9025508 AET5Gv20060100 [endoplasmic reticulum membrane] R-ATA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119325 Sphingolipid metabolism none Aegilops tauschii AET5Gv20073000 R-ATA-1127031-2 AET5Gv20073000 [cytosol] R-ATA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119460 Isoleucine biosynthesis from threonine none Aegilops tauschii AET5Gv20073600 R-ATA-1122632 AET5Gv20073600 [cytosol] R-ATA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119331 Cysteine biosynthesis I none Aegilops tauschii AET5Gv20081900 R-ATA-1125151 AET5Gv20081900 [cytosol] R-ATA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119400 Methionine biosynthesis II none Aegilops tauschii AET5Gv20081900 R-ATA-1125151 AET5Gv20081900 [cytosol] R-ATA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119501 S-adenosyl-L-methionine cycle none Aegilops tauschii AET5Gv20089700 R-ATA-9826669 OsYABBY6 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET5Gv20098600 R-ATA-5632111 AET5Gv20098600 [cytosol] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET5Gv20098600 R-ATA-5632216 phospho-AET5Gv20098600 [cytosol] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET5Gv20098600 R-ATA-5632145 phospho-AET5Gv20098600 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET5Gv20099800 R-ATA-5221146 AET5Gv20099800 [plastid] R-ATA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119374 Abscisic acid biosynthesis none Aegilops tauschii AET5Gv20103700 R-ATA-9826635 PCF8 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET5Gv20107000 R-ATA-1126971 AET5Gv20107000 [cytosol] R-ATA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119332 Jasmonic acid biosynthesis none Aegilops tauschii AET5Gv20107000 R-ATA-1126971 AET5Gv20107000 [cytosol] R-ATA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119618 13-LOX and 13-HPL pathway none Aegilops tauschii AET5Gv20118600 R-ATA-1124232 AET5Gv20118600 [cytosol] R-ATA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119341 Galactosylcyclitol biosynthesis none Aegilops tauschii AET5Gv20149200 R-ATA-5632280 AET5Gv20149200 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET5Gv20149200 R-ATA-5632280 AET5Gv20149200 [nucleoplasm] R-ATA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5679411 Gibberellin signaling none Aegilops tauschii AET5Gv20153800 R-ATA-1123255 AET5Gv20153800 [cytosol] R-ATA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119506 tyrosine degradation I none Aegilops tauschii AET5Gv20155100 R-ATA-1127274 AET5Gv20155100 [cytosol] R-ATA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119612 Cysteine degradation none Aegilops tauschii AET5Gv20157600 R-ATA-1128594 AET5Gv20157600 [cytosol] R-ATA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119349 S-methylmethionine cycle none Aegilops tauschii AET5Gv20157600 R-ATA-1128594 AET5Gv20157600 [cytosol] R-ATA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119400 Methionine biosynthesis II none Aegilops tauschii AET5Gv20165100 R-ATA-9682527 AET5Gv20165100 [cytosol] R-ATA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119410 Ascorbate biosynthesis none Aegilops tauschii AET5Gv20169800 R-ATA-1129784 AET5Gv20169800 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET5Gv20170900 R-ATA-1125540 AET5Gv20170900 [cytosol] R-ATA-1119303 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119303 Pyridoxamine anabolism none Aegilops tauschii AET5Gv20170900 R-ATA-1125540 AET5Gv20170900 [cytosol] R-ATA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119534 Pyridoxal 5'-phosphate salvage pathway none Aegilops tauschii AET5Gv20174800 R-ATA-9658563 AET5Gv20174800 [endoplasmic reticulum lumen] R-ATA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119502 Allantoin degradation none Aegilops tauschii AET5Gv20196700 R-ATA-4415007 AET5Gv20196700 [cytosol] R-ATA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-3899351 Abscisic acid (ABA) mediated signaling none Aegilops tauschii AET5Gv20196700 R-ATA-4415016 phospho-AET5Gv20196700 [cytosol] R-ATA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-3899351 Abscisic acid (ABA) mediated signaling none Aegilops tauschii AET5Gv20200500 R-ATA-8879027 AET5Gv20200500 [nucleoplasm] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET5Gv20224700 R-ATA-9611544 SPL11 [nucleoplasm] R-ATA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops tauschii AET5Gv20224700 R-ATA-9611440 phospho-phosphorylated-SPL11 [nucleoplasm] R-ATA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops tauschii AET5Gv20241800 R-ATA-9640745 AET5Gv20241800 [nucleoplasm] R-ATA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640882 Assembly of pre-replication complex none Aegilops tauschii AET5Gv20241800 R-ATA-9640745 AET5Gv20241800 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET5Gv20241800 R-ATA-9640745 AET5Gv20241800 [nucleoplasm] R-ATA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675824 DNA replication Initiation none Aegilops tauschii AET5Gv20245800 R-ATA-1123894 AET5Gv20245800 [plasma membrane] R-ATA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119314 Cellulose biosynthesis none Aegilops tauschii AET5Gv20251200 R-ATA-9916125 AET5Gv20251200 [nucleoplasm] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET5Gv20251200 R-ATA-9916231 AET5Gv20251200 [cytosol] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET5Gv20251200 R-ATA-9916199 phospho-AET5Gv20251200 [cytosol] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET5Gv20251600 R-ATA-1130036 AET5Gv20251600 [endoplasmic reticulum membrane] R-ATA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119402 Phospholipid biosynthesis I none Aegilops tauschii AET5Gv20252200 R-ATA-2685738 AET5Gv20252200 [cytosol] R-ATA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119580 IAA biosynthesis II none Aegilops tauschii AET5Gv20253300 R-ATA-9918201 AET5Gv20253300 [amyloplast] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET5Gv20253500 R-ATA-9618056 AET5Gv20253500 [plasma membrane] R-ATA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9618218 Arsenic uptake and detoxification none Aegilops tauschii AET5Gv20256100 R-ATA-1129924 AET5Gv20256100 [cytosol] R-ATA-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119342 Gamma-glutamyl cycle none Aegilops tauschii AET5Gv20256100 R-ATA-1129924 AET5Gv20256100 [cytosol] R-ATA-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119483 Glutathione biosynthesis none Aegilops tauschii AET5Gv20256600 R-ATA-5608090 AET5Gv20256600 [plasma membrane] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET5Gv20256600 R-ATA-5608190 AET5Gv20256600 [cytosol] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET5Gv20261300 R-ATA-9920304 AET5Gv20261300 [nucleoplasm] R-ATA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934108 Short day regulated expression of florigens none Aegilops tauschii AET5Gv20268700 R-ATA-9607149 AET5Gv20268700 [plasma membrane] R-ATA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9607185 Generation of superoxide radicals none Aegilops tauschii AET5Gv20268700 R-ATA-9607094 phospho-AET5Gv20268700 [plasma membrane] R-ATA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9607185 Generation of superoxide radicals none Aegilops tauschii AET5Gv20283200 R-ATA-1127151 AET5Gv20283200 [cytosol] R-ATA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119384 NAD biosynthesis I (from aspartate) none Aegilops tauschii AET5Gv20316400 R-ATA-1128906 AET5Gv20316400 [cytosol] R-ATA-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119444 Canavanine biosynthesis none Aegilops tauschii AET5Gv20326600 R-ATA-9675877 AET5Gv20326600 [nucleoplasm] R-ATA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675815 Leading strand synthesis none Aegilops tauschii AET5Gv20333100 R-ATA-1125550 AET5Gv20333100 [cytosol] R-ATA-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119623 Acyl-CoA synthetase pathway none Aegilops tauschii AET5Gv20334500 R-ATA-1126741 AET5Gv20334500 [plastid] R-ATA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119407 Ureide biosynthesis none Aegilops tauschii AET5Gv20342800 R-ATA-9640722 AET5Gv20342800 [nucleoplasm] R-ATA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640887 G1/S transition none Aegilops tauschii AET5Gv20348200 R-ATA-9608694 AET5Gv20348200 [cytosol] R-ATA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9928831 Severe drought none Aegilops tauschii AET5Gv20348200 R-ATA-9928774 AET5Gv20348200 [nucleoplasm] R-ATA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9928831 Severe drought none Aegilops tauschii AET5Gv20350200 R-ATA-5655070 AET5Gv20350200 [Golgi lumen] R-ATA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5655101 Xyloglucan biosynthesis none Aegilops tauschii AET5Gv20352300 R-ATA-1122881 AET5Gv20352300 [cytosol] R-ATA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops tauschii AET5Gv20352300 R-ATA-1122881 AET5Gv20352300 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET5Gv20352300 R-ATA-1122881 AET5Gv20352300 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET5Gv20354800 R-ATA-9826645 NH5 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET5Gv20355200 R-ATA-1127173 AET5Gv20355200 [cytosol] R-ATA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119540 Leucine biosynthesis none Aegilops tauschii AET5Gv20356000 R-ATA-1129809 AET5Gv20356000 [mitochondrial inner membrane] R-ATA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119410 Ascorbate biosynthesis none Aegilops tauschii AET5Gv20361100 R-ATA-1123943 AET5Gv20361100 [plastid] R-ATA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119365 Lysine degradation II none Aegilops tauschii AET5Gv20362700 R-ATA-9681911 AET5Gv20362700 [Golgi membrane] R-ATA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops tauschii AET5Gv20365500 R-ATA-9025819 AET5Gv20365500 [plasma membrane] R-ATA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9025727 Iron uptake and transport in root vascular system none Aegilops tauschii AET5Gv20365900 R-ATA-1125839 AET5Gv20365900 [cytosol] R-ATA-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119386 UDP-N-acetylgalactosamine biosynthesis none Aegilops tauschii AET5Gv20370700 R-ATA-1126387 AET5Gv20370700 [cytosol] R-ATA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119295 Homoserine biosynthesis none Aegilops tauschii AET5Gv20370900 R-ATA-8986682 AET5Gv20370900 [extracellular region] R-ATA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8986768 Anther and pollen development none Aegilops tauschii AET5Gv20371500 R-ATA-9645907 AET5Gv20371500 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET5Gv20371500 R-ATA-9645907 AET5Gv20371500 [nucleoplasm] R-ATA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675824 DNA replication Initiation none Aegilops tauschii AET5Gv20372500 R-ATA-9826671 NAC77 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET5Gv20391700 R-ATA-1130055 AET5Gv20391700 [endoplasmic reticulum membrane] R-ATA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119260 Cardiolipin biosynthesis none Aegilops tauschii AET5Gv20391700 R-ATA-1130055 AET5Gv20391700 [endoplasmic reticulum membrane] R-ATA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119402 Phospholipid biosynthesis I none Aegilops tauschii AET5Gv20394400 R-ATA-1125804 AET5Gv20394400 [cytosol] R-ATA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119300 Glycolipid desaturation none Aegilops tauschii AET5Gv20394700 R-ATA-5654797 AET5Gv20394700 [nucleoplasm] R-ATA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5654828 Strigolactone signaling none Aegilops tauschii AET5Gv20397400 R-ATA-5633270 AET5Gv20397400 [cytosol] R-ATA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119495 Citrulline biosynthesis none Aegilops tauschii AET5Gv20406000 R-ATA-9640671 AET5Gv20406000 [nucleoplasm] R-ATA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640760 G1 phase none Aegilops tauschii AET5Gv20406000 R-ATA-9640671 AET5Gv20406000 [nucleoplasm] R-ATA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640887 G1/S transition none Aegilops tauschii AET5Gv20416000 R-ATA-8987531-2 AET5Gv20416000 [chloroplast] R-ATA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119312 Photorespiration none Aegilops tauschii AET5Gv20416000 R-ATA-1125951-2 AET5Gv20416000 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET5Gv20416100 R-ATA-8987531-3 AET5Gv20416100 [chloroplast] R-ATA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119312 Photorespiration none Aegilops tauschii AET5Gv20416100 R-ATA-1125951 AET5Gv20416100 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET5Gv20416900 R-ATA-9927723 AET5Gv20416900 [nucleoplasm] R-ATA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934036 Long day regulated expression of florigens none Aegilops tauschii AET5Gv20425400 R-ATA-1126998 AET5Gv20425400 [cytosol] R-ATA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119615 Mevalonate pathway none Aegilops tauschii AET5Gv20425600 R-ATA-1123161 AET5Gv20425600 [chloroplast] R-ATA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119494 Tryptophan biosynthesis none Aegilops tauschii AET5Gv20425700 R-ATA-1124959 AET5Gv20425700 [cytosol] R-ATA-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119623 Acyl-CoA synthetase pathway none Aegilops tauschii AET5Gv20427700 R-ATA-1127491 AET5Gv20427700 [chloroplast] R-ATA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119312 Photorespiration none Aegilops tauschii AET5Gv20437800 R-ATA-5632251 AET5Gv20437800 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET5Gv20441500 R-ATA-1123557 AET5Gv20441500 [cytosol] R-ATA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119273 Lysine biosynthesis I none Aegilops tauschii AET5Gv20441500 R-ATA-1123557 AET5Gv20441500 [cytosol] R-ATA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119283 Lysine biosynthesis II none Aegilops tauschii AET5Gv20441500 R-ATA-1123557 AET5Gv20441500 [cytosol] R-ATA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119295 Homoserine biosynthesis none Aegilops tauschii AET5Gv20441500 R-ATA-5606479 AET5Gv20441500 [plastid stroma] R-ATA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119419 Lysine biosynthesis VI none Aegilops tauschii AET5Gv20443400 R-ATA-1127443 AET5Gv20443400 [amyloplast] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET5Gv20455900 R-ATA-1122936 AET5Gv20455900 [cytosol] R-ATA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119452 Galactose degradation II none Aegilops tauschii AET5Gv20457000 R-ATA-4415015 AET5Gv20457000 [cytosol] R-ATA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-3899351 Abscisic acid (ABA) mediated signaling none Aegilops tauschii AET5Gv20460100 R-ATA-9826647 AET5Gv20460100 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET5Gv20460600 R-ATA-5083827 AET5Gv20460600 [mitochondrial matrix] R-ATA-1119319 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119319 Alanine biosynthesis III none Aegilops tauschii AET5Gv20460600 R-ATA-5083827 AET5Gv20460600 [mitochondrial matrix] R-ATA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119612 Cysteine degradation none Aegilops tauschii AET5Gv20470900 R-ATA-6787276 AET5Gv20470900 [plastid stroma] R-ATA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119261 Salicylate biosynthesis none Aegilops tauschii AET5Gv20470900 R-ATA-6787950 AET5Gv20470900 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET5Gv20471000 R-ATA-1122242 AET5Gv20471000 [cytosol] R-ATA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119267 Phenylalanine degradation III none Aegilops tauschii AET5Gv20477200 R-ATA-1125587 AET5Gv20477200 [cytosol] R-ATA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119379 Flavin biosynthesis none Aegilops tauschii AET5Gv20479500 R-ATA-1123096 AET5Gv20479500 [mitochondrial inner membrane] R-ATA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119533 TCA cycle (plant) none Aegilops tauschii AET5Gv20483500 R-ATA-1129438-2 AET5Gv20483500 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET5Gv20490400 R-ATA-9640729 AET5Gv20490400 [nucleoplasm] R-ATA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640760 G1 phase none Aegilops tauschii AET5Gv20490400 R-ATA-9640729 AET5Gv20490400 [nucleoplasm] R-ATA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640887 G1/S transition none Aegilops tauschii AET5Gv20493400 R-ATA-1124956 AET5Gv20493400 [cytosol] R-ATA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119276 Choline biosynthesis III none Aegilops tauschii AET5Gv20493800 R-ATA-6788036 AET5Gv20493800 [cytosol] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET5Gv20493800 R-ATA-1126611 AET5Gv20493800 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET5Gv20497900 R-ATA-1128160 AET5Gv20497900 [cytosol] R-ATA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119516 Trehalose biosynthesis I none Aegilops tauschii AET5Gv20500700 R-ATA-6786969 AET5Gv20500700 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET5Gv20500700 R-ATA-6787121 AET5Gv20500700 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET5Gv20500700 R-ATA-6786969 AET5Gv20500700 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET5Gv20512500 R-ATA-1126048 AET5Gv20512500 [mitochondrion] R-ATA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119407 Ureide biosynthesis none Aegilops tauschii AET5Gv20517200 R-ATA-1124813 AET5Gv20517200 [mitochondrial matrix] R-ATA-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119337 Proline degradation none Aegilops tauschii AET5Gv20517200 R-ATA-8986570 AET5Gv20517200 [mitochondrial matrix] R-ATA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119365 Lysine degradation II none Aegilops tauschii AET5Gv20517200 R-ATA-9658682 AET5Gv20517200 [cytosol] R-ATA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119567 Beta-alanine biosynthesis I none Aegilops tauschii AET5Gv20519300 R-ATA-5679378 AET5Gv20519300 [nucleoplasm] R-ATA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5679411 Gibberellin signaling none Aegilops tauschii AET5Gv20519300 R-ATA-5679378 AET5Gv20519300 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET5Gv20519300 R-ATA-6787094 AET5Gv20519300 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET5Gv20519300 R-ATA-5679378 AET5Gv20519300 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET5Gv20520000 R-ATA-8854102 AET5Gv20520000 [cytosol] R-ATA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119556 Choline biosynthesis I none Aegilops tauschii AET5Gv20520600 R-ATA-9607102 AET5Gv20520600 [mitochondrion] R-ATA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9607185 Generation of superoxide radicals none Aegilops tauschii AET5Gv20534500 R-ATA-5654765 AET5Gv20534500 [cytosol] R-ATA-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119446 Lysine degradation I none Aegilops tauschii AET5Gv20537200 R-ATA-1124334 AET5Gv20537200 [plasma membrane] R-ATA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119314 Cellulose biosynthesis none Aegilops tauschii AET5Gv20540300 R-ATA-1124786 AET5Gv20540300 [cytosol] R-ATA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119276 Choline biosynthesis III none Aegilops tauschii AET5Gv20543100 R-ATA-1125953 AET5Gv20543100 [cytosol] R-ATA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119316 Phenylpropanoid biosynthesis none Aegilops tauschii AET5Gv20544500 R-ATA-6787948 AET5Gv20544500 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET5Gv20544800 R-ATA-6787876 AET5Gv20544800 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET5Gv20550900 R-ATA-1126542 AET5Gv20550900 [cytosol] R-ATA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119523 Tetrahydrofolate biosynthesis II none Aegilops tauschii AET5Gv20550900 R-ATA-1126542 AET5Gv20550900 [cytosol] R-ATA-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119617 Folate polyglutamylation I none Aegilops tauschii AET5Gv20560500 R-ATA-5679470 AET5Gv20560500 [nucleoplasm] R-ATA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5679411 Gibberellin signaling none Aegilops tauschii AET5Gv20561300 R-ATA-1122827 AET5Gv20561300 [cytosol] R-ATA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119334 Ethylene biosynthesis from methionine none Aegilops tauschii AET5Gv20562300 R-ATA-9611489 LYP4 [plasma membrane] R-ATA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops tauschii AET5Gv20565400 R-ATA-1122877 AET5Gv20565400 [cytosol] R-ATA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119586 Cyanate degradation none Aegilops tauschii AET5Gv20568300 R-ATA-1126380 AET5Gv20568300 [cytosol] R-ATA-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119609 Phaseic acid biosynthesis none Aegilops tauschii AET5Gv20569100 R-ATA-5655083 AET5Gv20569100 [Golgi lumen] R-ATA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5655101 Xyloglucan biosynthesis none Aegilops tauschii AET5Gv20579600 R-ATA-1128980 AET5Gv20579600 [cytosol] R-ATA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119586 Cyanate degradation none Aegilops tauschii AET5Gv20581600 R-ATA-9640777 AET5Gv20581600 [nucleoplasm] R-ATA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640760 G1 phase none Aegilops tauschii AET5Gv20581600 R-ATA-9640777 AET5Gv20581600 [nucleoplasm] R-ATA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640887 G1/S transition none Aegilops tauschii AET5Gv20582500 R-ATA-2960195 AET5Gv20582500 [cytosol] R-ATA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119410 Ascorbate biosynthesis none Aegilops tauschii AET5Gv20582500 R-ATA-2960195 AET5Gv20582500 [cytosol] R-ATA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119570 Cytosolic glycolysis none Aegilops tauschii AET5Gv20595000 R-ATA-1130049 AET5Gv20595000 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET5Gv20595200 R-ATA-1130049-2 AET5Gv20595200 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET5Gv20622300 R-ATA-2960790 AET5Gv20622300 [cytosol] R-ATA-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119386 UDP-N-acetylgalactosamine biosynthesis none Aegilops tauschii AET5Gv20622300 R-ATA-2960790 AET5Gv20622300 [cytosol] R-ATA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030654 Primary root development none Aegilops tauschii AET5Gv20623800 R-ATA-6786917 AET5Gv20623800 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET5Gv20624900 R-ATA-9608743 AET5Gv20624900 [cytosol] R-ATA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9608575 Reproductive meristem phase change none Aegilops tauschii AET5Gv20624900 R-ATA-9608705 AET5Gv20624900 [nucleoplasm] R-ATA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9608575 Reproductive meristem phase change none Aegilops tauschii AET5Gv20625700 R-ATA-8987499 AET5Gv20625700 [peroxisomal matrix] R-ATA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119312 Photorespiration none Aegilops tauschii AET5Gv20625700 R-ATA-1130222 AET5Gv20625700 [cytosol] R-ATA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119596 Glutamate biosynthesis I none Aegilops tauschii AET5Gv20626900 R-ATA-8868866 AET5Gv20626900 [endoplasmic reticulum membrane] R-ATA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8868949 Intracellular auxin transport none Aegilops tauschii AET5Gv20631600 R-ATA-1125142 AET5Gv20631600 [cytosol] R-ATA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119615 Mevalonate pathway none Aegilops tauschii AET5Gv20633700 R-ATA-1122454 AET5Gv20633700 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET5Gv20654300 R-ATA-5608218 AET5Gv20654300 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET5Gv20655300 R-ATA-1129921 AET5Gv20655300 [cytosol] R-ATA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119428 GDP-D-rhamnose biosynthesis none Aegilops tauschii AET5Gv20655300 R-ATA-1129921 AET5Gv20655300 [cytosol] R-ATA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops tauschii AET5Gv20660100 R-ATA-1125374 AET5Gv20660100 [cytosol] R-ATA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119586 Cyanate degradation none Aegilops tauschii AET5Gv20660400 R-ATA-1125374-2 AET5Gv20660400 [cytosol] R-ATA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119586 Cyanate degradation none Aegilops tauschii AET5Gv20662700 R-ATA-1123575 AET5Gv20662700 [cytosol] R-ATA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119297 Beta-alanine biosynthesis III none Aegilops tauschii AET5Gv20664300 R-ATA-1124138 AET5Gv20664300 [cytosol] R-ATA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119394 Pantothenate and coenzyme A biosynthesis III none Aegilops tauschii AET5Gv20664400 R-ATA-1124905 AET5Gv20664400 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET5Gv20678200 R-ATA-1125489 AET5Gv20678200 [Golgi membrane] R-ATA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119428 GDP-D-rhamnose biosynthesis none Aegilops tauschii AET5Gv20678200 R-ATA-1125489 AET5Gv20678200 [Golgi membrane] R-ATA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops tauschii AET5Gv20678200 R-ATA-1125489 AET5Gv20678200 [Golgi membrane] R-ATA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops tauschii AET5Gv20693200 R-ATA-1129136 AET5Gv20693200 [plastid stroma] R-ATA-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Aegilops tauschii AET5Gv20704900 R-ATA-1128511 AET5Gv20704900 [cytosol] R-ATA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119506 tyrosine degradation I none Aegilops tauschii AET5Gv20710900 R-ATA-9639010 AET5Gv20710900 [cytosol] R-ATA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119434 Phytic acid biosynthesis (lipid-independent) none Aegilops tauschii AET5Gv20711900 R-ATA-6786926-4 AET5Gv20711900 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET5Gv20712000 R-ATA-6786926-3 AET5Gv20712000 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET5Gv20712100 R-ATA-6786926-2 AET5Gv20712100 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET5Gv20712400 R-ATA-6786926 AET5Gv20712400 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET5Gv20712500 R-ATA-9675866 AET5Gv20712500 [nucleoplasm] R-ATA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675782 Maturation none Aegilops tauschii AET5Gv20712500 R-ATA-9675866 AET5Gv20712500 [nucleoplasm] R-ATA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675815 Leading strand synthesis none Aegilops tauschii AET5Gv20712500 R-ATA-9675866 AET5Gv20712500 [nucleoplasm] R-ATA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675885 Lagging strand synthesis none Aegilops tauschii AET5Gv20721800 R-ATA-9766868 DREB1A [nucleoplasm] R-ATA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9766881 TF network involved in salinity response none Aegilops tauschii AET5Gv20722800 R-ATA-9916305 AET5Gv20722800 [nucleoplasm] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET5Gv20725600 R-ATA-1130394 AET5Gv20725600 [cytosol] R-ATA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119452 Galactose degradation II none Aegilops tauschii AET5Gv20728300 R-ATA-9924533 TAC1 [nucleoplasm] R-ATA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops tauschii AET5Gv20732700 R-ATA-1122564 AET5Gv20732700 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET5Gv20736500 R-ATA-8933784 AET5Gv20736500 [nucleoplasm] R-ATA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8933811 Circadian rhythm none Aegilops tauschii AET5Gv20739700 R-ATA-1127502 AET5Gv20739700 [cytosol] R-ATA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119394 Pantothenate and coenzyme A biosynthesis III none Aegilops tauschii AET5Gv20746200 R-ATA-1128877 AET5Gv20746200 [plastid stroma] R-ATA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119424 Plastid glycolysis none Aegilops tauschii AET5Gv20746200 R-ATA-1128877 AET5Gv20746200 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET5Gv20761100 R-ATA-1126440 AET5Gv20761100 [plastid stroma] R-ATA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119430 Chorismate biosynthesis none Aegilops tauschii AET5Gv20761800 R-ATA-9645954 AET5Gv20761800 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET5Gv20764000 R-ATA-9927863 phospho-AET5Gv20764000 [nucleoplasm] R-ATA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934257 Transition from vegetative to reproductive shoot apical meristem none Aegilops tauschii AET5Gv20764000 R-ATA-9927884 AET5Gv20764000 [nucleoplasm] R-ATA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934257 Transition from vegetative to reproductive shoot apical meristem none Aegilops tauschii AET5Gv20764000 R-ATA-9927863 phospho-AET5Gv20764000 [nucleoplasm] R-ATA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9928831 Severe drought none Aegilops tauschii AET5Gv20770400 R-ATA-9675280 AET5Gv20770400 [nucleoplasm] R-ATA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030680 Crown root development none Aegilops tauschii AET5Gv20771200 R-ATA-1129187 AET5Gv20771200 [cytosol] R-ATA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119276 Choline biosynthesis III none Aegilops tauschii AET5Gv20790200 R-ATA-9924417 SAUR39 [cytosol] R-ATA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops tauschii AET5Gv20821100 R-ATA-1124095 AET5Gv20821100 [cytosol] R-ATA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119452 Galactose degradation II none Aegilops tauschii AET5Gv20822900 R-ATA-8868994 AET5Gv20822900 [endoplasmic reticulum membrane] R-ATA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8868949 Intracellular auxin transport none Aegilops tauschii AET5Gv20824700 R-ATA-1123525 AET5Gv20824700 [cytosol] R-ATA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119384 NAD biosynthesis I (from aspartate) none Aegilops tauschii AET5Gv20828100 R-ATA-5679404 AET5Gv20828100 [nucleoplasm] R-ATA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5679411 Gibberellin signaling none Aegilops tauschii AET5Gv20862700 R-ATA-1130348 AET5Gv20862700 [cytosol] R-ATA-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Aegilops tauschii AET5Gv20874800 R-ATA-5221144 AET5Gv20874800 [plastid] R-ATA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119374 Abscisic acid biosynthesis none Aegilops tauschii AET5Gv20876200 R-ATA-5631953 AET5Gv20876200 [mitochondrial matrix] R-ATA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119289 Arginine degradation none Aegilops tauschii AET5Gv20876200 R-ATA-1124214 AET5Gv20876200 [cytosol] R-ATA-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119318 Proline biosynthesis V (from arginine) none Aegilops tauschii AET5Gv20876200 R-ATA-1124214 AET5Gv20876200 [cytosol] R-ATA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119610 Biotin biosynthesis II none Aegilops tauschii AET5Gv20883900 R-ATA-1122892 AET5Gv20883900 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET5Gv20883900 R-ATA-1122892 AET5Gv20883900 [nucleoplasm] R-ATA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030557 Lateral root initiation none Aegilops tauschii AET5Gv20892900 R-ATA-1128092 AET5Gv20892900 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET5Gv20892900 R-ATA-1128092 AET5Gv20892900 [nucleoplasm] R-ATA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030557 Lateral root initiation none Aegilops tauschii AET5Gv20892900 R-ATA-1128092 AET5Gv20892900 [nucleoplasm] R-ATA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030654 Primary root development none Aegilops tauschii AET5Gv20893800 R-ATA-1128257 AET5Gv20893800 [plastid stroma] R-ATA-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119529 Sulfate activation for sulfonation none Aegilops tauschii AET5Gv20907000 R-ATA-1126604 AET5Gv20907000 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET5Gv20910900 R-ATA-8934009 AET5Gv20910900 [nucleoplasm] R-ATA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934036 Long day regulated expression of florigens none Aegilops tauschii AET5Gv20910900 R-ATA-8934009 AET5Gv20910900 [nucleoplasm] R-ATA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934257 Transition from vegetative to reproductive shoot apical meristem none Aegilops tauschii AET5Gv20910900 R-ATA-8934009 AET5Gv20910900 [nucleoplasm] R-ATA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609102 Flower development none Aegilops tauschii AET5Gv20912400 R-ATA-9639171 AET5Gv20912400 [plant-type vacuole membrane] R-ATA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9639136 Response to Aluminum stress none Aegilops tauschii AET5Gv20915400 R-ATA-1125460 AET5Gv20915400 [cytosol] R-ATA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119452 Galactose degradation II none Aegilops tauschii AET5Gv20915400 R-ATA-1125460 AET5Gv20915400 [cytosol] R-ATA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119563 UDP-D-xylose biosynthesis none Aegilops tauschii AET5Gv20915400 R-ATA-1125460 AET5Gv20915400 [cytosol] R-ATA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops tauschii AET5Gv20920000 R-ATA-9640694 AET5Gv20920000 [nucleoplasm] R-ATA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640882 Assembly of pre-replication complex none Aegilops tauschii AET5Gv20920000 R-ATA-9640694 AET5Gv20920000 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET5Gv20922000 R-ATA-1125504 AET5Gv20922000 [cytosol] R-ATA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119273 Lysine biosynthesis I none Aegilops tauschii AET5Gv20922000 R-ATA-1125504 AET5Gv20922000 [cytosol] R-ATA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119283 Lysine biosynthesis II none Aegilops tauschii AET5Gv20922000 R-ATA-1125504 AET5Gv20922000 [cytosol] R-ATA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119295 Homoserine biosynthesis none Aegilops tauschii AET5Gv20922000 R-ATA-5606489 AET5Gv20922000 [plastid stroma] R-ATA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119419 Lysine biosynthesis VI none Aegilops tauschii AET5Gv20926700 R-ATA-8933816 AET5Gv20926700 [nucleoplasm] R-ATA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8933811 Circadian rhythm none Aegilops tauschii AET5Gv20928200 R-ATA-4415109 phospho-AET5Gv20928200 [cytosol] R-ATA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-3899351 Abscisic acid (ABA) mediated signaling none Aegilops tauschii AET5Gv20962700 R-ATA-1123404 AET5Gv20962700 [peroxisomal matrix] R-ATA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119407 Ureide biosynthesis none Aegilops tauschii AET5Gv20963000 R-ATA-9025548 AET5Gv20963000 [endoplasmic reticulum membrane] R-ATA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119325 Sphingolipid metabolism none Aegilops tauschii AET5Gv20963400 R-ATA-1124484 AET5Gv20963400 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET5Gv20977800 R-ATA-5632110 AET5Gv20977800 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET5Gv20977800 R-ATA-5632110 AET5Gv20977800 [nucleoplasm] R-ATA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5679411 Gibberellin signaling none Aegilops tauschii AET5Gv20989600 R-ATA-8987551 AET5Gv20989600 [peroxisomal matrix] R-ATA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119312 Photorespiration none Aegilops tauschii AET5Gv20989600 R-ATA-1124984 AET5Gv20989600 [cytosol] R-ATA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119596 Glutamate biosynthesis I none Aegilops tauschii AET5Gv20994800 R-ATA-1250418 AET5Gv20994800 [cytosol] R-ATA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119374 Abscisic acid biosynthesis none Aegilops tauschii AET5Gv20994800 R-ATA-1129305 AET5Gv20994800 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET5Gv20997400 R-ATA-9675838 AET5Gv20997400 [nucleoplasm] R-ATA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675815 Leading strand synthesis none Aegilops tauschii AET5Gv21021300 R-ATA-1129781-3 AET5Gv21021300 [chloroplast] R-ATA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119494 Tryptophan biosynthesis none Aegilops tauschii AET5Gv21022100 R-ATA-1129781-2 AET5Gv21022100 [chloroplast] R-ATA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119494 Tryptophan biosynthesis none Aegilops tauschii AET5Gv21025700 R-ATA-1126436 AET5Gv21025700 [cytosol] R-ATA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119615 Mevalonate pathway none Aegilops tauschii AET5Gv21053700 R-ATA-1128553 AET5Gv21053700 [cytosol] R-ATA-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Aegilops tauschii AET5Gv21053700 R-ATA-1128553 AET5Gv21053700 [cytosol] R-ATA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119370 Sterol biosynthesis none Aegilops tauschii AET5Gv21053700 R-ATA-1128553 AET5Gv21053700 [cytosol] R-ATA-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119439 Cholesterol biosynthesis III (via desmosterol) none Aegilops tauschii AET5Gv21053700 R-ATA-1128553 AET5Gv21053700 [cytosol] R-ATA-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119559 Cholesterol biosynthesis I none Aegilops tauschii AET5Gv21054500 R-ATA-5632241 AET5Gv21054500 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET5Gv21064600 R-ATA-1122861 AET5Gv21064600 [plasma membrane] R-ATA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119314 Cellulose biosynthesis none Aegilops tauschii AET5Gv21079700 R-ATA-1250417 AET5Gv21079700 [cytosol] R-ATA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119374 Abscisic acid biosynthesis none Aegilops tauschii AET5Gv21093900 R-ATA-1122398 AET5Gv21093900 [amyloplast] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET5Gv21097800 R-ATA-9608682 AET5Gv21097800 [nucleoplasm] R-ATA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934036 Long day regulated expression of florigens none Aegilops tauschii AET5Gv21097800 R-ATA-9608682 AET5Gv21097800 [nucleoplasm] R-ATA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9608575 Reproductive meristem phase change none Aegilops tauschii AET5Gv21097800 R-ATA-9608606 AET5Gv21097800 [cytosol] R-ATA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9608575 Reproductive meristem phase change none Aegilops tauschii AET5Gv21098400 R-ATA-1126714 AET5Gv21098400 [cytosol] R-ATA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119273 Lysine biosynthesis I none Aegilops tauschii AET5Gv21098400 R-ATA-1126714 AET5Gv21098400 [cytosol] R-ATA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119283 Lysine biosynthesis II none Aegilops tauschii AET5Gv21098400 R-ATA-1126714 AET5Gv21098400 [cytosol] R-ATA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119295 Homoserine biosynthesis none Aegilops tauschii AET5Gv21098400 R-ATA-5606484 AET5Gv21098400 [plastid stroma] R-ATA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119419 Lysine biosynthesis VI none Aegilops tauschii AET5Gv21102900 R-ATA-9609608-3 AET5Gv21102900 [cytosol] R-ATA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609573 Tricin biosynthesis none Aegilops tauschii AET5Gv21102900 R-ATA-9916171-3 OsOMT [cytosol] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET5Gv21102900 R-ATA-9916312-3 OsOMT [nucleoplasm] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET5Gv21103000 R-ATA-9609608-2 AET5Gv21103000 [cytosol] R-ATA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609573 Tricin biosynthesis none Aegilops tauschii AET5Gv21103000 R-ATA-9916171-2 OsOMT [cytosol] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET5Gv21103000 R-ATA-9916312-2 OsOMT [nucleoplasm] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET5Gv21103100 R-ATA-1124274 AET5Gv21103100 [cytosol] R-ATA-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119513 Pinobanksin biosynthesis none Aegilops tauschii AET5Gv21103100 R-ATA-1124274 AET5Gv21103100 [cytosol] R-ATA-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119531 Flavonoid biosynthesis none Aegilops tauschii AET5Gv21120900 R-ATA-1123751 AET5Gv21120900 [cytosol] R-ATA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119292 Cytokinins 7-N-glucoside biosynthesis none Aegilops tauschii AET5Gv21120900 R-ATA-1123751 AET5Gv21120900 [cytosol] R-ATA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119375 Cytokinins 9-N-glucoside biosynthesis none Aegilops tauschii AET5Gv21120900 R-ATA-1123751 AET5Gv21120900 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET5Gv21121900 R-ATA-8986695 AET5Gv21121900 [endoplasmic reticulum membrane] R-ATA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8986768 Anther and pollen development none Aegilops tauschii AET5Gv21126000 R-ATA-1128656 AET5Gv21126000 [chloroplast] R-ATA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119494 Tryptophan biosynthesis none Aegilops tauschii AET5Gv21140900 R-ATA-1129507 AET5Gv21140900 [cytosol] R-ATA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119452 Galactose degradation II none Aegilops tauschii AET5Gv21143500 R-ATA-9031256 AET5Gv21143500 [endoplasmic reticulum lumen] R-ATA-9031225 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9031225 Response to phosphate deficiency none Aegilops tauschii AET5Gv21143500 R-ATA-9031289 AET5Gv21143500 [plasma membrane] R-ATA-9031225 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9031225 Response to phosphate deficiency none Aegilops tauschii AET5Gv21143500 R-ATA-9031289 AET5Gv21143500 [plasma membrane] R-ATA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9618218 Arsenic uptake and detoxification none Aegilops tauschii AET5Gv21146100 R-ATA-1128038 AET5Gv21146100 [cytosol] R-ATA-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119353 Linear furanocoumarin biosynthesis none Aegilops tauschii AET5Gv21149700 R-ATA-9626474 AET5Gv21149700 [trans-Golgi network membrane] R-ATA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9626305 Regulatory network of nutrient accumulation none Aegilops tauschii AET5Gv21151100 R-ATA-2685731 AET5Gv21151100 [cytosol] R-ATA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119580 IAA biosynthesis II none Aegilops tauschii AET5Gv21171500 R-ATA-9916247-2 OsEXPA19 [extracellular region] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET5Gv21171500 R-ATA-9916296-2 OsEXPA20 [extracellular region] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET5Gv21174100 R-ATA-9609608-9 AET5Gv21174100 [cytosol] R-ATA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609573 Tricin biosynthesis none Aegilops tauschii AET5Gv21174100 R-ATA-9916171-9 OsOMT [cytosol] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET5Gv21174100 R-ATA-9916312-9 OsOMT [nucleoplasm] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET5Gv21178500 R-ATA-5632129 AET5Gv21178500 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET5Gv21187300 R-ATA-1126714-2 AET5Gv21187300 [cytosol] R-ATA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119273 Lysine biosynthesis I none Aegilops tauschii AET5Gv21187300 R-ATA-1126714-2 AET5Gv21187300 [cytosol] R-ATA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119283 Lysine biosynthesis II none Aegilops tauschii AET5Gv21187300 R-ATA-1126714-2 AET5Gv21187300 [cytosol] R-ATA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119295 Homoserine biosynthesis none Aegilops tauschii AET5Gv21187300 R-ATA-5606484-2 AET5Gv21187300 [plastid stroma] R-ATA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119419 Lysine biosynthesis VI none Aegilops tauschii AET5Gv21213200 R-ATA-6787093-3 AET5Gv21213200 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET5Gv21239000 R-ATA-1129559-2 AET5Gv21239000 [plastid stroma] R-ATA-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119308 Momilactone biosynthesis none Aegilops tauschii AET6Gv20002600 R-ATA-8987448 AET6Gv20002600 [peroxisomal matrix] R-ATA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119312 Photorespiration none Aegilops tauschii AET6Gv20007600 R-ATA-1130078 AET6Gv20007600 [cytosol] R-ATA-1119440 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119440 Anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside) none Aegilops tauschii AET6Gv20007600 R-ATA-2672102 AET6Gv20007600 [cytosol] R-ATA-1119514 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119514 Anthocyanin biosynthesis (delphinidin 3-O-glucoside) none Aegilops tauschii AET6Gv20013800 R-ATA-9609608-4 AET6Gv20013800 [cytosol] R-ATA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609573 Tricin biosynthesis none Aegilops tauschii AET6Gv20013800 R-ATA-9916171-4 OsOMT [cytosol] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET6Gv20013800 R-ATA-9916312-4 OsOMT [nucleoplasm] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET6Gv20020200 R-ATA-1126971-2 AET6Gv20020200 [cytosol] R-ATA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119332 Jasmonic acid biosynthesis none Aegilops tauschii AET6Gv20020200 R-ATA-1126971-2 AET6Gv20020200 [cytosol] R-ATA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119618 13-LOX and 13-HPL pathway none Aegilops tauschii AET6Gv20024100 R-ATA-1124291-3 AET6Gv20024100 [cytosol] R-ATA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops tauschii AET6Gv20024100 R-ATA-1124291-3 AET6Gv20024100 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET6Gv20024100 R-ATA-1124291-3 AET6Gv20024100 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET6Gv20026500 R-ATA-1124291-5 AET6Gv20026500 [cytosol] R-ATA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops tauschii AET6Gv20026500 R-ATA-1124291-5 AET6Gv20026500 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET6Gv20026500 R-ATA-1124291-5 AET6Gv20026500 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET6Gv20027200 R-ATA-1128178-2 AET6Gv20027200 [cytosol] R-ATA-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119322 Leucodelphinidin biosynthesis none Aegilops tauschii AET6Gv20027200 R-ATA-1128178-2 AET6Gv20027200 [cytosol] R-ATA-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Aegilops tauschii AET6Gv20027200 R-ATA-9609575-2 AET6Gv20027200 [endoplasmic reticulum membrane] R-ATA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609573 Tricin biosynthesis none Aegilops tauschii AET6Gv20029100 R-ATA-5633332 AET6Gv20029100 [plastid stroma] R-ATA-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5633340 Citrulline-nitric oxide cycle none Aegilops tauschii AET6Gv20041500 R-ATA-1127880 AET6Gv20041500 [cytosol] R-ATA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119291 Nitrate assimilation none Aegilops tauschii AET6Gv20051500 R-ATA-9025463 AET6Gv20051500 [endoplasmic reticulum membrane] R-ATA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119325 Sphingolipid metabolism none Aegilops tauschii AET6Gv20051600 R-ATA-1126888 AET6Gv20051600 [cytosol] R-ATA-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119360 Fructan biosynthesis none Aegilops tauschii AET6Gv20067200 R-ATA-1126373 AET6Gv20067200 [cytosol] R-ATA-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Aegilops tauschii AET6Gv20086900 R-ATA-9611864 AET6Gv20086900 [mitochondrial matrix] R-ATA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119479 Valine degradation none Aegilops tauschii AET6Gv20160900 R-ATA-1127705 AET6Gv20160900 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET6Gv20172700 R-ATA-9675293 AET6Gv20172700 [nucleoplasm] R-ATA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030557 Lateral root initiation none Aegilops tauschii AET6Gv20177300 R-ATA-1114864 AET6Gv20177300 [cytosol] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET6Gv20178800 R-ATA-8986723 AET6Gv20178800 [nucleoplasm] R-ATA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8986768 Anther and pollen development none Aegilops tauschii AET6Gv20179200 R-ATA-8986723-2 AET6Gv20179200 [nucleoplasm] R-ATA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8986768 Anther and pollen development none Aegilops tauschii AET6Gv20179700 R-ATA-3240748 AET6Gv20179700 [cytosol] R-ATA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Aegilops tauschii AET6Gv20182400 R-ATA-8854445 AET6Gv20182400 [cytosol] R-ATA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119276 Choline biosynthesis III none Aegilops tauschii AET6Gv20195700 R-ATA-1130088 AET6Gv20195700 [plasma membrane] R-ATA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119314 Cellulose biosynthesis none Aegilops tauschii AET6Gv20196800 R-ATA-9640697 phospho-AET6Gv20196800 [nucleoplasm] R-ATA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640760 G1 phase none Aegilops tauschii AET6Gv20196800 R-ATA-9640660 AET6Gv20196800 [nucleoplasm] R-ATA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640760 G1 phase none Aegilops tauschii AET6Gv20196800 R-ATA-9640697 phospho-AET6Gv20196800 [nucleoplasm] R-ATA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640887 G1/S transition none Aegilops tauschii AET6Gv20201500 R-ATA-1124939 AET6Gv20201500 [cytosol] R-ATA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119540 Leucine biosynthesis none Aegilops tauschii AET6Gv20216000 R-ATA-1124520 AET6Gv20216000 [cytosol] R-ATA-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119278 PRPP biosynthesis I none Aegilops tauschii AET6Gv20235400 R-ATA-1129600 AET6Gv20235400 [cytosol] R-ATA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119407 Ureide biosynthesis none Aegilops tauschii AET6Gv20244500 R-ATA-1130162 AET6Gv20244500 [chloroplast] R-ATA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119494 Tryptophan biosynthesis none Aegilops tauschii AET6Gv20249000 R-ATA-9645891 AET6Gv20249000 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET6Gv20253400 R-ATA-8986777 AET6Gv20253400 [extracellular region] R-ATA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8986768 Anther and pollen development none Aegilops tauschii AET6Gv20253700 R-ATA-8986777-3 AET6Gv20253700 [extracellular region] R-ATA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8986768 Anther and pollen development none Aegilops tauschii AET6Gv20255600 R-ATA-1122347 AET6Gv20255600 [cytosol] R-ATA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119384 NAD biosynthesis I (from aspartate) none Aegilops tauschii AET6Gv20257800 R-ATA-8986777-2 AET6Gv20257800 [extracellular region] R-ATA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8986768 Anther and pollen development none Aegilops tauschii AET6Gv20268200 R-ATA-9675439 AET6Gv20268200 [mitochondrial matrix] R-ATA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030654 Primary root development none Aegilops tauschii AET6Gv20276900 R-ATA-1124797-5 AET6Gv20276900 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET6Gv20291200 R-ATA-1130281 AET6Gv20291200 [cytosol] R-ATA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops tauschii AET6Gv20307300 R-ATA-6787224 AET6Gv20307300 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET6Gv20307300 R-ATA-6787146 AET6Gv20307300 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET6Gv20315300 R-ATA-8933832 AET6Gv20315300 [nucleoplasm] R-ATA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8933811 Circadian rhythm none Aegilops tauschii AET6Gv20318800 R-ATA-1127738 AET6Gv20318800 [cytosol] R-ATA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119273 Lysine biosynthesis I none Aegilops tauschii AET6Gv20318800 R-ATA-1127738 AET6Gv20318800 [cytosol] R-ATA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119283 Lysine biosynthesis II none Aegilops tauschii AET6Gv20318800 R-ATA-5606514 AET6Gv20318800 [plastid stroma] R-ATA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119419 Lysine biosynthesis VI none Aegilops tauschii AET6Gv20324000 R-ATA-9920292 AET6Gv20324000 [nucleoplasm] R-ATA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934108 Short day regulated expression of florigens none Aegilops tauschii AET6Gv20332000 R-ATA-5633387-2 AET6Gv20332000 [mitochondrial matrix] R-ATA-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119445 Beta-alanine biosynthesis II none Aegilops tauschii AET6Gv20332200 R-ATA-8934084 AET6Gv20332200 [nucleoplasm] R-ATA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9928995 Drought escape (DE) via ABA-dependent pathway none Aegilops tauschii AET6Gv20338300 R-ATA-9618085 AET6Gv20338300 [cytosol] R-ATA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9618218 Arsenic uptake and detoxification none Aegilops tauschii AET6Gv20358500 R-ATA-1128626 AET6Gv20358500 [cytosol] R-ATA-1119581 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119581 Thiosulfate disproportionation III (rhodanese) none Aegilops tauschii AET6Gv20363100 R-ATA-1127799 AET6Gv20363100 [cytosol] R-ATA-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119342 Gamma-glutamyl cycle none Aegilops tauschii AET6Gv20363100 R-ATA-1127799 AET6Gv20363100 [cytosol] R-ATA-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119483 Glutathione biosynthesis none Aegilops tauschii AET6Gv20364300 R-ATA-1128974 AET6Gv20364300 [cytosol] R-ATA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119287 Vitamin E biosynthesis none Aegilops tauschii AET6Gv20364300 R-ATA-1128974 AET6Gv20364300 [cytosol] R-ATA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119506 tyrosine degradation I none Aegilops tauschii AET6Gv20369200 R-ATA-4827041 AET6Gv20369200 [plastid stroma] R-ATA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-4827054 Tetrapyrrole biosynthesis I none Aegilops tauschii AET6Gv20372200 R-ATA-1125090 AET6Gv20372200 [cytosol] R-ATA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119465 Sucrose biosynthesis none Aegilops tauschii AET6Gv20377400 R-ATA-6787130 AET6Gv20377400 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET6Gv20377400 R-ATA-6787130 AET6Gv20377400 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET6Gv20377500 R-ATA-1125275 AET6Gv20377500 [cytosol] R-ATA-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119629 Thiamine biosynthesis none Aegilops tauschii AET6Gv20378600 R-ATA-1130344 AET6Gv20378600 [cytosol] R-ATA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119389 Phenylalanine biosynthesis I none Aegilops tauschii AET6Gv20388700 R-ATA-1122463 AET6Gv20388700 [cytosol] R-ATA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119321 Glycerol degradation I none Aegilops tauschii AET6Gv20397000 R-ATA-1129846 AET6Gv20397000 [mitochondrion] R-ATA-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119337 Proline degradation none Aegilops tauschii AET6Gv20397000 R-ATA-1129846 AET6Gv20397000 [mitochondrion] R-ATA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119458 Glutamate degradation none Aegilops tauschii AET6Gv20397900 R-ATA-1125187 AET6Gv20397900 [cytosol] R-ATA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119276 Choline biosynthesis III none Aegilops tauschii AET6Gv20398100 R-ATA-6787138 AET6Gv20398100 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET6Gv20398100 R-ATA-6787092 AET6Gv20398100 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET6Gv20400200 R-ATA-1125241 AET6Gv20400200 [cytosol] R-ATA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119273 Lysine biosynthesis I none Aegilops tauschii AET6Gv20400200 R-ATA-1125241 AET6Gv20400200 [cytosol] R-ATA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119283 Lysine biosynthesis II none Aegilops tauschii AET6Gv20403200 R-ATA-9025712-3 AET6Gv20403200 [cytosol] R-ATA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9025754 Mugineic acid biosynthesis none Aegilops tauschii AET6Gv20404200 R-ATA-9025712-6 AET6Gv20404200 [cytosol] R-ATA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9025754 Mugineic acid biosynthesis none Aegilops tauschii AET6Gv20405200 R-ATA-5149657 AET6Gv20405200 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET6Gv20405200 R-ATA-1129239 AET6Gv20405200 [cytosol] R-ATA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119570 Cytosolic glycolysis none Aegilops tauschii AET6Gv20412700 R-ATA-4415060 AET6Gv20412700 [plasma membrane] R-ATA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-3899351 Abscisic acid (ABA) mediated signaling none Aegilops tauschii AET6Gv20412700 R-ATA-4415065 phospho-AET6Gv20412700 [plasma membrane] R-ATA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-3899351 Abscisic acid (ABA) mediated signaling none Aegilops tauschii AET6Gv20413900 R-ATA-1124048 AET6Gv20413900 [cytosol] R-ATA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119610 Biotin biosynthesis II none Aegilops tauschii AET6Gv20415600 R-ATA-1122849 AET6Gv20415600 [mitochondrion] R-ATA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119506 tyrosine degradation I none Aegilops tauschii AET6Gv20418700 R-ATA-1129769 AET6Gv20418700 [cytosol] R-ATA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119332 Jasmonic acid biosynthesis none Aegilops tauschii AET6Gv20418700 R-ATA-1129769 AET6Gv20418700 [cytosol] R-ATA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119618 13-LOX and 13-HPL pathway none Aegilops tauschii AET6Gv20421400 R-ATA-1126730 AET6Gv20421400 [cytosol] R-ATA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119389 Phenylalanine biosynthesis I none Aegilops tauschii AET6Gv20421400 R-ATA-1126730 AET6Gv20421400 [cytosol] R-ATA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119400 Methionine biosynthesis II none Aegilops tauschii AET6Gv20421400 R-ATA-1126730 AET6Gv20421400 [cytosol] R-ATA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119506 tyrosine degradation I none Aegilops tauschii AET6Gv20422500 R-ATA-1129055 AET6Gv20422500 [mitochondrial matrix] R-ATA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119533 TCA cycle (plant) none Aegilops tauschii AET6Gv20428400 R-ATA-1125615 AET6Gv20428400 [cytosol] R-ATA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119334 Ethylene biosynthesis from methionine none Aegilops tauschii AET6Gv20428400 R-ATA-1125615 AET6Gv20428400 [cytosol] R-ATA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119501 S-adenosyl-L-methionine cycle none Aegilops tauschii AET6Gv20428400 R-ATA-1125615 AET6Gv20428400 [cytosol] R-ATA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119624 Methionine salvage pathway none Aegilops tauschii AET6Gv20428400 R-ATA-9025738 AET6Gv20428400 [cytosol] R-ATA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9025754 Mugineic acid biosynthesis none Aegilops tauschii AET6Gv20434000 R-ATA-1122832 AET6Gv20434000 [plastid stroma] R-ATA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119449 Carotenoid biosynthesis none Aegilops tauschii AET6Gv20438400 R-ATA-1125967 AET6Gv20438400 [cytosol] R-ATA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119316 Phenylpropanoid biosynthesis none Aegilops tauschii AET6Gv20453300 R-ATA-9918179 AET6Gv20453300 [amyloplast] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET6Gv20453900 R-ATA-6787185 AET6Gv20453900 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET6Gv20459400 R-ATA-6787113 AET6Gv20459400 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET6Gv20467500 R-ATA-5367743 AET6Gv20467500 [cytosol] R-ATA-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5367729 Strigolactone biosynthesis none Aegilops tauschii AET6Gv20484000 R-ATA-5632264 AET6Gv20484000 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET6Gv20497100 R-ATA-5655094 AET6Gv20497100 [Golgi lumen] R-ATA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5655101 Xyloglucan biosynthesis none Aegilops tauschii AET6Gv20507700 R-ATA-1128319 AET6Gv20507700 [cytosol] R-ATA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119341 Galactosylcyclitol biosynthesis none Aegilops tauschii AET6Gv20511100 R-ATA-8933710 AET6Gv20511100 [nucleoplasm] R-ATA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8933811 Circadian rhythm none Aegilops tauschii AET6Gv20533900 R-ATA-9675481 AET6Gv20533900 [cytosol] R-ATA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030654 Primary root development none Aegilops tauschii AET6Gv20539100 R-ATA-1129851-2 AET6Gv20539100 [mitochondrial matrix] R-ATA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119533 TCA cycle (plant) none Aegilops tauschii AET6Gv20539100 R-ATA-1129851-2 AET6Gv20539100 [mitochondrial matrix] R-ATA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119540 Leucine biosynthesis none Aegilops tauschii AET6Gv20544100 R-ATA-9640739 AET6Gv20544100 [nucleoplasm] R-ATA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640887 G1/S transition none Aegilops tauschii AET6Gv20548400 R-ATA-1128950 AET6Gv20548400 [cytosol] R-ATA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119379 Flavin biosynthesis none Aegilops tauschii AET6Gv20557600 R-ATA-1126662 AET6Gv20557600 [mitochondrial matrix] R-ATA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119533 TCA cycle (plant) none Aegilops tauschii AET6Gv20557600 R-ATA-1126662 AET6Gv20557600 [mitochondrial matrix] R-ATA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119540 Leucine biosynthesis none Aegilops tauschii AET6Gv20563000 R-ATA-6787934 AET6Gv20563000 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET6Gv20563900 R-ATA-1126647 AET6Gv20563900 [cytosol] R-ATA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119273 Lysine biosynthesis I none Aegilops tauschii AET6Gv20563900 R-ATA-1126647 AET6Gv20563900 [cytosol] R-ATA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119283 Lysine biosynthesis II none Aegilops tauschii AET6Gv20568700 R-ATA-1124778 AET6Gv20568700 [plastid stroma] R-ATA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119464 Methylerythritol phosphate pathway none Aegilops tauschii AET6Gv20574200 R-ATA-1126689 AET6Gv20574200 [cytosol] R-ATA-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119353 Linear furanocoumarin biosynthesis none Aegilops tauschii AET6Gv20579800 R-ATA-1124523 AET6Gv20579800 [cytosol] R-ATA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119460 Isoleucine biosynthesis from threonine none Aegilops tauschii AET6Gv20579800 R-ATA-1124523 AET6Gv20579800 [cytosol] R-ATA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119600 Valine biosynthesis none Aegilops tauschii AET6Gv20580900 R-ATA-8934060 AET6Gv20580900 [nucleoplasm] R-ATA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934036 Long day regulated expression of florigens none Aegilops tauschii AET6Gv20580900 R-ATA-8934060 AET6Gv20580900 [nucleoplasm] R-ATA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934108 Short day regulated expression of florigens none Aegilops tauschii AET6Gv20582000 R-ATA-1128077 AET6Gv20582000 [cytosol] R-ATA-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119317 Spermine biosynthesis none Aegilops tauschii AET6Gv20582000 R-ATA-1128077 AET6Gv20582000 [cytosol] R-ATA-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119343 Spermidine biosynthesis none Aegilops tauschii AET6Gv20583000 R-ATA-1128431 AET6Gv20583000 [cytosol] R-ATA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119316 Phenylpropanoid biosynthesis none Aegilops tauschii AET6Gv20593300 R-ATA-8933833 AET6Gv20593300 [nucleoplasm] R-ATA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8933811 Circadian rhythm none Aegilops tauschii AET6Gv20593300 R-ATA-8933833 AET6Gv20593300 [nucleoplasm] R-ATA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9928995 Drought escape (DE) via ABA-dependent pathway none Aegilops tauschii AET6Gv20598400 R-ATA-1129896 AET6Gv20598400 [mitochondrial matrix] R-ATA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119533 TCA cycle (plant) none Aegilops tauschii AET6Gv20600500 R-ATA-8879002 AET6Gv20600500 [nucleoplasm] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET6Gv20600800 R-ATA-8879002-5 AET6Gv20600800 [nucleoplasm] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET6Gv20601300 R-ATA-8879002-3 AET6Gv20601300 [nucleoplasm] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET6Gv20602400 R-ATA-8879002-2 AET6Gv20602400 [nucleoplasm] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET6Gv20602600 R-ATA-8879002-4 AET6Gv20602600 [nucleoplasm] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET6Gv20602700 R-ATA-8879002-6 AET6Gv20602700 [nucleoplasm] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET6Gv20603300 R-ATA-8933738 AET6Gv20603300 [nucleoplasm] R-ATA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8933811 Circadian rhythm none Aegilops tauschii AET6Gv20605200 R-ATA-1125701-3 AET6Gv20605200 [cytosol] R-ATA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119261 Salicylate biosynthesis none Aegilops tauschii AET6Gv20605200 R-ATA-1125701-3 AET6Gv20605200 [cytosol] R-ATA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119418 Suberin biosynthesis none Aegilops tauschii AET6Gv20605200 R-ATA-1125701-3 AET6Gv20605200 [cytosol] R-ATA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops tauschii AET6Gv20605500 R-ATA-1124767 AET6Gv20605500 [cytosol] R-ATA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119261 Salicylate biosynthesis none Aegilops tauschii AET6Gv20605500 R-ATA-1124767 AET6Gv20605500 [cytosol] R-ATA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119418 Suberin biosynthesis none Aegilops tauschii AET6Gv20605500 R-ATA-1124767 AET6Gv20605500 [cytosol] R-ATA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops tauschii AET6Gv20612800 R-ATA-1127161 AET6Gv20612800 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET6Gv20612900 R-ATA-1125730 AET6Gv20612900 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET6Gv20613100 R-ATA-1124490 AET6Gv20613100 [cytosol] R-ATA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119534 Pyridoxal 5'-phosphate salvage pathway none Aegilops tauschii AET6Gv20613100 R-ATA-1124490 AET6Gv20613100 [cytosol] R-ATA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119594 Pyridoxal 5'-phosphate biosynthesis none Aegilops tauschii AET6Gv20619900 R-ATA-3321270 AET6Gv20619900 [chloroplast inner membrane] R-ATA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119287 Vitamin E biosynthesis none Aegilops tauschii AET6Gv20624600 R-ATA-9826692 AET6Gv20624600 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET6Gv20627900 R-ATA-9025772 AET6Gv20627900 [plasma membrane] R-ATA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9025727 Iron uptake and transport in root vascular system none Aegilops tauschii AET6Gv20628100 R-ATA-9025699-2 AET6Gv20628100 [plasma membrane] R-ATA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8858053 Polar auxin transport none Aegilops tauschii AET6Gv20628200 R-ATA-9025699 AET6Gv20628200 [plasma membrane] R-ATA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8858053 Polar auxin transport none Aegilops tauschii AET6Gv20632400 R-ATA-1126053 AET6Gv20632400 [mitochondrial matrix] R-ATA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119479 Valine degradation none Aegilops tauschii AET6Gv20634700 R-ATA-1124032 AET6Gv20634700 [cytosol] R-ATA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119540 Leucine biosynthesis none Aegilops tauschii AET6Gv20635500 R-ATA-9025447 AET6Gv20635500 [cytosol] R-ATA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119325 Sphingolipid metabolism none Aegilops tauschii AET6Gv20641100 R-ATA-1125474 AET6Gv20641100 [cytosol] R-ATA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119437 Glutathione redox reactions I none Aegilops tauschii AET6Gv20643500 R-ATA-1124164 AET6Gv20643500 [cytosol] R-ATA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119334 Ethylene biosynthesis from methionine none Aegilops tauschii AET6Gv20643500 R-ATA-1124164 AET6Gv20643500 [cytosol] R-ATA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119501 S-adenosyl-L-methionine cycle none Aegilops tauschii AET6Gv20643500 R-ATA-1124164 AET6Gv20643500 [cytosol] R-ATA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119624 Methionine salvage pathway none Aegilops tauschii AET6Gv20643500 R-ATA-9025764 AET6Gv20643500 [cytosol] R-ATA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9025754 Mugineic acid biosynthesis none Aegilops tauschii AET6Gv20649400 R-ATA-5138484 AET6Gv20649400 [plastid stroma] R-ATA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119263 Arginine biosynthesis none Aegilops tauschii AET6Gv20649400 R-ATA-5138484 AET6Gv20649400 [plastid stroma] R-ATA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119539 Ornithine biosynthesis none Aegilops tauschii AET6Gv20649400 R-ATA-5138484 AET6Gv20649400 [plastid stroma] R-ATA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119622 Arginine biosynthesis II (acetyl cycle) none Aegilops tauschii AET6Gv20650100 R-ATA-9826639 AET6Gv20650100 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET6Gv20662600 R-ATA-9826696 AET6Gv20662600 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET6Gv20663900 R-ATA-8879029 DREB1G [nucleoplasm] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET6Gv20664900 R-ATA-9608680 AET6Gv20664900 [nucleoplasm] R-ATA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9608575 Reproductive meristem phase change none Aegilops tauschii AET6Gv20664900 R-ATA-9608583 AET6Gv20664900 [cytosol] R-ATA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9608575 Reproductive meristem phase change none Aegilops tauschii AET6Gv20666600 R-ATA-1129922 AET6Gv20666600 [plastid stroma] R-ATA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119464 Methylerythritol phosphate pathway none Aegilops tauschii AET6Gv20671200 R-ATA-5221151 AET6Gv20671200 [cytosol] R-ATA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-3899351 Abscisic acid (ABA) mediated signaling none Aegilops tauschii AET6Gv20672500 R-ATA-1130181 AET6Gv20672500 [plastid stroma] R-ATA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119430 Chorismate biosynthesis none Aegilops tauschii AET6Gv20674900 R-ATA-5138481 AET6Gv20674900 [plastid stroma] R-ATA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119263 Arginine biosynthesis none Aegilops tauschii AET6Gv20674900 R-ATA-5138481 AET6Gv20674900 [plastid stroma] R-ATA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119539 Ornithine biosynthesis none Aegilops tauschii AET6Gv20680500 R-ATA-1129650 AET6Gv20680500 [cytosol] R-ATA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119418 Suberin biosynthesis none Aegilops tauschii AET6Gv20681200 R-ATA-5149678 AET6Gv20681200 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET6Gv20685900 R-ATA-9826605 OsBRXL1 [plasma membrane] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET6Gv20685900 R-ATA-9826610 OsBRXL1 [cytosol] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET6Gv20685900 R-ATA-9826605 OsBRXL1 [plasma membrane] R-ATA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops tauschii AET6Gv20685900 R-ATA-9826610 OsBRXL1 [cytosol] R-ATA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops tauschii AET6Gv20686300 R-ATA-3321260 AET6Gv20686300 [chloroplast stroma] R-ATA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119287 Vitamin E biosynthesis none Aegilops tauschii AET6Gv20686600 R-ATA-9025500 AET6Gv20686600 [endoplasmic reticulum membrane] R-ATA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119325 Sphingolipid metabolism none Aegilops tauschii AET6Gv20688500 R-ATA-1128857 AET6Gv20688500 [cytosol] R-ATA-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119609 Phaseic acid biosynthesis none Aegilops tauschii AET6Gv20688800 R-ATA-9924558 NCED1 [plastid] R-ATA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Aegilops tauschii AET6Gv20689900 R-ATA-5138486 AET6Gv20689900 [plastid stroma] R-ATA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119263 Arginine biosynthesis none Aegilops tauschii AET6Gv20689900 R-ATA-1123709 AET6Gv20689900 [cytosol] R-ATA-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119318 Proline biosynthesis V (from arginine) none Aegilops tauschii AET6Gv20689900 R-ATA-1123709 AET6Gv20689900 [cytosol] R-ATA-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119444 Canavanine biosynthesis none Aegilops tauschii AET6Gv20690900 R-ATA-9916252 OsEGT1 [nucleoplasm] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET6Gv20696300 R-ATA-1125447 AET6Gv20696300 [plastid stroma] R-ATA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119509 Histidine biosynthesis I none Aegilops tauschii AET6Gv20701400 R-ATA-9826666 AET6Gv20701400 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET6Gv20705500 R-ATA-1123913 AET6Gv20705500 [cytosol] R-ATA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119300 Glycolipid desaturation none Aegilops tauschii AET6Gv20707300 R-ATA-1123913-2 AET6Gv20707300 [cytosol] R-ATA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119300 Glycolipid desaturation none Aegilops tauschii AET6Gv20708000 R-ATA-1124598 AET6Gv20708000 [cytosol] R-ATA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119300 Glycolipid desaturation none Aegilops tauschii AET6Gv20710800 R-ATA-2960780 AET6Gv20710800 [cytosol] R-ATA-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119386 UDP-N-acetylgalactosamine biosynthesis none Aegilops tauschii AET6Gv20721200 R-ATA-5655075 AET6Gv20721200 [Golgi lumen] R-ATA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5655101 Xyloglucan biosynthesis none Aegilops tauschii AET6Gv20724500 R-ATA-1127382 AET6Gv20724500 [cytosol] R-ATA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119460 Isoleucine biosynthesis from threonine none Aegilops tauschii AET6Gv20724500 R-ATA-1127382 AET6Gv20724500 [cytosol] R-ATA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119600 Valine biosynthesis none Aegilops tauschii AET6Gv20726900 R-ATA-9025482 AET6Gv20726900 [endoplasmic reticulum membrane] R-ATA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119325 Sphingolipid metabolism none Aegilops tauschii AET6Gv20729700 R-ATA-5632087 AET6Gv20729700 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET6Gv20733800 R-ATA-9924576 OsMADS57 [nucleoplasm] R-ATA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Aegilops tauschii AET6Gv20745500 R-ATA-9658702 AET6Gv20745500 [plastid stroma] R-ATA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119297 Beta-alanine biosynthesis III none Aegilops tauschii AET6Gv20756100 R-ATA-1127429 AET6Gv20756100 [plastid stroma] R-ATA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119430 Chorismate biosynthesis none Aegilops tauschii AET6Gv20759700 R-ATA-9025498 AET6Gv20759700 [endoplasmic reticulum membrane] R-ATA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119325 Sphingolipid metabolism none Aegilops tauschii AET6Gv20760300 R-ATA-9618131 AET6Gv20760300 [plasma membrane] R-ATA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9618218 Arsenic uptake and detoxification none Aegilops tauschii AET6Gv20761300 R-ATA-1122261 AET6Gv20761300 [plastid stroma] R-ATA-1119602 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119602 Phytyl-PP biosynthesis none Aegilops tauschii AET6Gv20761300 R-ATA-1122261 AET6Gv20761300 [plastid stroma] R-ATA-1119605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119605 Chlorophyll a biosynthesis II none Aegilops tauschii AET6Gv20761400 R-ATA-9918275 soluble Starch Synthase (SSII-2/SSIIb) [amyloplast] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET6Gv20762900 R-ATA-1122656 AET6Gv20762900 [endosome] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET6Gv20762900 R-ATA-5679312 AET6Gv20762900 [plasma membrane] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET6Gv20764300 R-ATA-3315084 AET6Gv20764300 [cytosol] R-ATA-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119342 Gamma-glutamyl cycle none Aegilops tauschii AET6Gv20771600 R-ATA-8987554 AET6Gv20771600 [mitochondrial matrix] R-ATA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119312 Photorespiration none Aegilops tauschii AET6Gv20777000 R-ATA-5679294 AET6Gv20777000 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET6Gv20783900 R-ATA-1124797-2 AET6Gv20783900 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET6Gv20787700 R-ATA-5655076 AET6Gv20787700 [Golgi lumen] R-ATA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5655101 Xyloglucan biosynthesis none Aegilops tauschii AET6Gv20788700 R-ATA-5655106 AET6Gv20788700 [Golgi lumen] R-ATA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5655101 Xyloglucan biosynthesis none Aegilops tauschii AET6Gv20793500 R-ATA-9675818 AET6Gv20793500 [nucleoplasm] R-ATA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675815 Leading strand synthesis none Aegilops tauschii AET6Gv20802700 R-ATA-8933714 AET6Gv20802700 [nucleoplasm] R-ATA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8933811 Circadian rhythm none Aegilops tauschii AET6Gv20803600 R-ATA-1130304 AET6Gv20803600 [cytosol] R-ATA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119291 Nitrate assimilation none Aegilops tauschii AET6Gv20815400 R-ATA-1124797-4 AET6Gv20815400 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET6Gv20815600 R-ATA-1124797-3 AET6Gv20815600 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET6Gv20820400 R-ATA-9928961 AET6Gv20820400 [nucleoplasm] R-ATA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9928995 Drought escape (DE) via ABA-dependent pathway none Aegilops tauschii AET6Gv20822700 R-ATA-1127526 AET6Gv20822700 [cytosol] R-ATA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119332 Jasmonic acid biosynthesis none Aegilops tauschii AET6Gv20833900 R-ATA-1123610-2 AET6Gv20833900 [cytosol] R-ATA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119389 Phenylalanine biosynthesis I none Aegilops tauschii AET6Gv20833900 R-ATA-1123610-2 AET6Gv20833900 [cytosol] R-ATA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119400 Methionine biosynthesis II none Aegilops tauschii AET6Gv20833900 R-ATA-1123610-2 AET6Gv20833900 [cytosol] R-ATA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119506 tyrosine degradation I none Aegilops tauschii AET6Gv20849000 R-ATA-1124797-7 AET6Gv20849000 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET6Gv20854500 R-ATA-1129571 AET6Gv20854500 [mitochondrion] R-ATA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119365 Lysine degradation II none Aegilops tauschii AET6Gv20858300 R-ATA-1129068 AET6Gv20858300 [cytosol] R-ATA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119460 Isoleucine biosynthesis from threonine none Aegilops tauschii AET6Gv20858300 R-ATA-1129068 AET6Gv20858300 [cytosol] R-ATA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119600 Valine biosynthesis none Aegilops tauschii AET6Gv20859000 R-ATA-9675354 AET6Gv20859000 [nucleoplasm] R-ATA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675508 Root elongation none Aegilops tauschii AET6Gv20867800 R-ATA-1123210 AET6Gv20867800 [cytosol] R-ATA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119516 Trehalose biosynthesis I none Aegilops tauschii AET6Gv20871800 R-ATA-1129203 AET6Gv20871800 [cytosol] R-ATA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119428 GDP-D-rhamnose biosynthesis none Aegilops tauschii AET6Gv20871800 R-ATA-1129203 AET6Gv20871800 [cytosol] R-ATA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops tauschii AET6Gv20889500 R-ATA-9640704 AET6Gv20889500 [nucleoplasm] R-ATA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640882 Assembly of pre-replication complex none Aegilops tauschii AET6Gv20889500 R-ATA-9640704 AET6Gv20889500 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET6Gv20889500 R-ATA-9640704 AET6Gv20889500 [nucleoplasm] R-ATA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675824 DNA replication Initiation none Aegilops tauschii AET6Gv20889700 R-ATA-1123797 AET6Gv20889700 [cytosol] R-ATA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119281 Aspartate biosynthesis I none Aegilops tauschii AET6Gv20889700 R-ATA-5632003 AET6Gv20889700 [plastid stroma] R-ATA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119553 Asparagine biosynthesis none Aegilops tauschii AET6Gv20898600 R-ATA-1122369 AET6Gv20898600 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET6Gv20913500 R-ATA-1129514 AET6Gv20913500 [chloroplast] R-ATA-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119579 Glycine betaine biosynthesis III none Aegilops tauschii AET6Gv20919200 R-ATA-1127247 AET6Gv20919200 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET6Gv20930700 R-ATA-1126714-3 AET6Gv20930700 [cytosol] R-ATA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119273 Lysine biosynthesis I none Aegilops tauschii AET6Gv20930700 R-ATA-1126714-3 AET6Gv20930700 [cytosol] R-ATA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119283 Lysine biosynthesis II none Aegilops tauschii AET6Gv20930700 R-ATA-1126714-3 AET6Gv20930700 [cytosol] R-ATA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119295 Homoserine biosynthesis none Aegilops tauschii AET6Gv20930700 R-ATA-5606484-3 AET6Gv20930700 [plastid stroma] R-ATA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119419 Lysine biosynthesis VI none Aegilops tauschii AET6Gv20939300 R-ATA-1129113 AET6Gv20939300 [cytosol] R-ATA-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119298 Glutathione redox reactions II none Aegilops tauschii AET6Gv20939300 R-ATA-1129113 AET6Gv20939300 [cytosol] R-ATA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119437 Glutathione redox reactions I none Aegilops tauschii AET6Gv20942700 R-ATA-1128327 AET6Gv20942700 [cytosol] R-ATA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119267 Phenylalanine degradation III none Aegilops tauschii AET6Gv20957400 R-ATA-1128385 AET6Gv20957400 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET6Gv20960800 R-ATA-9639018-2 AET6Gv20960800 [cytosol] R-ATA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119434 Phytic acid biosynthesis (lipid-independent) none Aegilops tauschii AET6Gv20969300 R-ATA-1129160 AET6Gv20969300 [mitochondrial matrix] R-ATA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119533 TCA cycle (plant) none Aegilops tauschii AET6Gv20969300 R-ATA-1129160 AET6Gv20969300 [mitochondrial matrix] R-ATA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119540 Leucine biosynthesis none Aegilops tauschii AET6Gv20979100 R-ATA-1126131 AET6Gv20979100 [cytosol] R-ATA-1119528 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119528 Beta-alanine betaine biosynthesis none Aegilops tauschii AET6Gv20996100 R-ATA-9826642 LAZY1 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET6Gv20996100 R-ATA-9826622 LAZY1 [plasma membrane] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET6Gv20996100 R-ATA-9826642 LAZY1 [nucleoplasm] R-ATA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops tauschii AET6Gv20996100 R-ATA-9826622 LAZY1 [plasma membrane] R-ATA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops tauschii AET6Gv20997600 R-ATA-8933787 AET6Gv20997600 [nucleoplasm] R-ATA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8933811 Circadian rhythm none Aegilops tauschii AET6Gv20999900 R-ATA-1128038-2 AET6Gv20999900 [cytosol] R-ATA-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119353 Linear furanocoumarin biosynthesis none Aegilops tauschii AET6Gv21000300 R-ATA-9645872 AET6Gv21000300 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET6Gv21010100 R-ATA-9611549 phospho-phosphorylated-CERK1 [plasma membrane] R-ATA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops tauschii AET6Gv21010100 R-ATA-9611466 CERK1 [plasma membrane] R-ATA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops tauschii AET6Gv21012300 R-ATA-1128766 AET6Gv21012300 [cytosol] R-ATA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119452 Galactose degradation II none Aegilops tauschii AET6Gv21012300 R-ATA-1128766 AET6Gv21012300 [cytosol] R-ATA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119465 Sucrose biosynthesis none Aegilops tauschii AET6Gv21012900 R-ATA-1125974-2 AET6Gv21012900 [cytosol] R-ATA-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119262 Threonine biosynthesis from homoserine none Aegilops tauschii AET6Gv21012900 R-ATA-1125974-2 AET6Gv21012900 [cytosol] R-ATA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119400 Methionine biosynthesis II none Aegilops tauschii AET6Gv21013100 R-ATA-1126305-2 AET6Gv21013100 [cytosol] R-ATA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119332 Jasmonic acid biosynthesis none Aegilops tauschii AET7Gv20009100 R-ATA-1127734 AET7Gv20009100 [cytosol] R-ATA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119506 tyrosine degradation I none Aegilops tauschii AET7Gv20017600 R-ATA-5608093 AET7Gv20017600 [plasma membrane] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET7Gv20031500 R-ATA-9622200 AET7Gv20031500 [plasma membrane] R-ATA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9035605 Regulation of seed size none Aegilops tauschii AET7Gv20039200 R-ATA-1122564-2 AET7Gv20039200 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET7Gv20039700 R-ATA-9639892 AET7Gv20039700 [cell wall] R-ATA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9639861 Development of root hair none Aegilops tauschii AET7Gv20040300 R-ATA-9826677 AET7Gv20040300 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET7Gv20040700 R-ATA-9826677-6 AET7Gv20040700 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET7Gv20040900 R-ATA-9826677-4 AET7Gv20040900 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET7Gv20062700 R-ATA-1123561 AET7Gv20062700 [cytosol] R-ATA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119624 Methionine salvage pathway none Aegilops tauschii AET7Gv20065600 R-ATA-1123609 AET7Gv20065600 [plasma membrane] R-ATA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119314 Cellulose biosynthesis none Aegilops tauschii AET7Gv20089400 R-ATA-1124695 AET7Gv20089400 [cytosol] R-ATA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119452 Galactose degradation II none Aegilops tauschii AET7Gv20089400 R-ATA-1124695 AET7Gv20089400 [cytosol] R-ATA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119465 Sucrose biosynthesis none Aegilops tauschii AET7Gv20104500 R-ATA-1124935-2 AET7Gv20104500 [cytosol] R-ATA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119349 S-methylmethionine cycle none Aegilops tauschii AET7Gv20106100 R-ATA-1125399 AET7Gv20106100 [plastid] R-ATA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119403 Removal of superoxide radicals none Aegilops tauschii AET7Gv20118500 R-ATA-1124866 AET7Gv20118500 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET7Gv20119900 R-ATA-1126916-2 AET7Gv20119900 [plastid stroma] R-ATA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119464 Methylerythritol phosphate pathway none Aegilops tauschii AET7Gv20120000 R-ATA-1124866-2 AET7Gv20120000 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET7Gv20120100 R-ATA-1124866-3 AET7Gv20120100 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET7Gv20123900 R-ATA-1124866-5 AET7Gv20123900 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET7Gv20124800 R-ATA-8879085-2 AET7Gv20124800 [nucleoplasm] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET7Gv20124900 R-ATA-8879085 AET7Gv20124900 [nucleoplasm] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET7Gv20127900 R-ATA-5632261 AET7Gv20127900 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET7Gv20132400 R-ATA-1123150-3 AET7Gv20132400 [cytosol] R-ATA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops tauschii AET7Gv20132400 R-ATA-1123150-3 AET7Gv20132400 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET7Gv20132400 R-ATA-1123150-3 AET7Gv20132400 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET7Gv20166000 R-ATA-1123832 AET7Gv20166000 [cytosol] R-ATA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119304 Putrescine biosynthesis II none Aegilops tauschii AET7Gv20166000 R-ATA-1123832 AET7Gv20166000 [cytosol] R-ATA-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119447 Putrescine biosynthesis I none Aegilops tauschii AET7Gv20167400 R-ATA-9918210 granule-bound starch synthase 1 (GBSSI, or Waxy) [amyloplast] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET7Gv20167400 R-ATA-9626344 AET7Gv20167400 [plastid stroma] R-ATA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9626305 Regulatory network of nutrient accumulation none Aegilops tauschii AET7Gv20177900 R-ATA-1130247 AET7Gv20177900 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET7Gv20193100 R-ATA-1124291-6 AET7Gv20193100 [cytosol] R-ATA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops tauschii AET7Gv20193100 R-ATA-1124291-6 AET7Gv20193100 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET7Gv20193100 R-ATA-1124291-6 AET7Gv20193100 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET7Gv20204200 R-ATA-8878987 AET7Gv20204200 [nucleoplasm] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET7Gv20208200 R-ATA-1129282-2 AET7Gv20208200 [cytosol] R-ATA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119428 GDP-D-rhamnose biosynthesis none Aegilops tauschii AET7Gv20208200 R-ATA-1129282-2 AET7Gv20208200 [cytosol] R-ATA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops tauschii AET7Gv20208300 R-ATA-1129282 AET7Gv20208300 [cytosol] R-ATA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119428 GDP-D-rhamnose biosynthesis none Aegilops tauschii AET7Gv20208300 R-ATA-1129282 AET7Gv20208300 [cytosol] R-ATA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops tauschii AET7Gv20210500 R-ATA-1127880-2 AET7Gv20210500 [cytosol] R-ATA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119291 Nitrate assimilation none Aegilops tauschii AET7Gv20214200 R-ATA-1122287-6 AET7Gv20214200 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET7Gv20214500 R-ATA-1129438 AET7Gv20214500 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET7Gv20214900 R-ATA-1122287-7 AET7Gv20214900 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET7Gv20235900 R-ATA-1122836-5 AET7Gv20235900 [cytosol] R-ATA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119586 Cyanate degradation none Aegilops tauschii AET7Gv20236800 R-ATA-9916108 AET7Gv20236800 [extracellular region] R-ATA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119403 Removal of superoxide radicals none Aegilops tauschii AET7Gv20236800 R-ATA-9916108 AET7Gv20236800 [extracellular region] R-ATA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9607185 Generation of superoxide radicals none Aegilops tauschii AET7Gv20237000 R-ATA-1122836-4 AET7Gv20237000 [cytosol] R-ATA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119586 Cyanate degradation none Aegilops tauschii AET7Gv20237400 R-ATA-1122836-2 AET7Gv20237400 [cytosol] R-ATA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119586 Cyanate degradation none Aegilops tauschii AET7Gv20238700 R-ATA-1125556 AET7Gv20238700 [cytosol] R-ATA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119410 Ascorbate biosynthesis none Aegilops tauschii AET7Gv20238700 R-ATA-1125556 AET7Gv20238700 [cytosol] R-ATA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119628 GDP-mannose metabolism none Aegilops tauschii AET7Gv20243100 R-ATA-1129355 AET7Gv20243100 [plastid] R-ATA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119403 Removal of superoxide radicals none Aegilops tauschii AET7Gv20263500 R-ATA-9025728 AET7Gv20263500 [plasma membrane] R-ATA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9025727 Iron uptake and transport in root vascular system none Aegilops tauschii AET7Gv20279600 R-ATA-5654840 AET7Gv20279600 [nucleoplasm] R-ATA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5654828 Strigolactone signaling none Aegilops tauschii AET7Gv20279600 R-ATA-5654840 AET7Gv20279600 [nucleoplasm] R-ATA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Aegilops tauschii AET7Gv20280700 R-ATA-9675391 AET7Gv20280700 [nucleoplasm] R-ATA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675508 Root elongation none Aegilops tauschii AET7Gv20290900 R-ATA-8934025 AET7Gv20290900 [nucleoplasm] R-ATA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934036 Long day regulated expression of florigens none Aegilops tauschii AET7Gv20290900 R-ATA-8934025 AET7Gv20290900 [nucleoplasm] R-ATA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934108 Short day regulated expression of florigens none Aegilops tauschii AET7Gv20290900 R-ATA-8934025 AET7Gv20290900 [nucleoplasm] R-ATA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934257 Transition from vegetative to reproductive shoot apical meristem none Aegilops tauschii AET7Gv20290900 R-ATA-9684733 AET7Gv20290900 [cytosol] R-ATA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934257 Transition from vegetative to reproductive shoot apical meristem none Aegilops tauschii AET7Gv20290900 R-ATA-9684733 AET7Gv20290900 [cytosol] R-ATA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609102 Flower development none Aegilops tauschii AET7Gv20290900 R-ATA-8934025 AET7Gv20290900 [nucleoplasm] R-ATA-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9928946 Drought escape (DE) via ABA-independent pathway none Aegilops tauschii AET7Gv20290900 R-ATA-8934025 AET7Gv20290900 [nucleoplasm] R-ATA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9928995 Drought escape (DE) via ABA-dependent pathway none Aegilops tauschii AET7Gv20295400 R-ATA-8986623 AET7Gv20295400 [nucleoplasm] R-ATA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8986768 Anther and pollen development none Aegilops tauschii AET7Gv20309100 R-ATA-1128586 AET7Gv20309100 [amyloplast] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET7Gv20317300 R-ATA-5655100 AET7Gv20317300 [Golgi lumen] R-ATA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5655101 Xyloglucan biosynthesis none Aegilops tauschii AET7Gv20321800 R-ATA-1122295 AET7Gv20321800 [cytosol] R-ATA-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119353 Linear furanocoumarin biosynthesis none Aegilops tauschii AET7Gv20325500 R-ATA-8879009 AET7Gv20325500 [nucleoplasm] R-ATA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8879007 Response to cold temperature none Aegilops tauschii AET7Gv20326100 R-ATA-5608174 AET7Gv20326100 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET7Gv20327300 R-ATA-5608174-2 AET7Gv20327300 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET7Gv20328600 R-ATA-1125910-3 AET7Gv20328600 [plastid stroma] R-ATA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119367 Polyisoprenoid biosynthesis none Aegilops tauschii AET7Gv20328700 R-ATA-1125910 AET7Gv20328700 [plastid stroma] R-ATA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119367 Polyisoprenoid biosynthesis none Aegilops tauschii AET7Gv20328800 R-ATA-1125910-2 AET7Gv20328800 [plastid stroma] R-ATA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119367 Polyisoprenoid biosynthesis none Aegilops tauschii AET7Gv20336800 R-ATA-9918273 AET7Gv20336800 [amyloplast] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET7Gv20336800 R-ATA-9626376 AET7Gv20336800 [plastid stroma] R-ATA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9626305 Regulatory network of nutrient accumulation none Aegilops tauschii AET7Gv20353300 R-ATA-1122287-9 AET7Gv20353300 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET7Gv20353900 R-ATA-1122287-14 AET7Gv20353900 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET7Gv20354800 R-ATA-1125261 AET7Gv20354800 R-ATA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119400 Methionine biosynthesis II none Aegilops tauschii AET7Gv20354900 R-ATA-1122287-5 AET7Gv20354900 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET7Gv20355500 R-ATA-1122287-3 AET7Gv20355500 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET7Gv20357200 R-ATA-1129485 AET7Gv20357200 [cytosol] R-ATA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119341 Galactosylcyclitol biosynthesis none Aegilops tauschii AET7Gv20361900 R-ATA-1129082 AET7Gv20361900 [mitochondrial matrix] R-ATA-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119445 Beta-alanine biosynthesis II none Aegilops tauschii AET7Gv20370300 R-ATA-9675476-2 AET7Gv20370300 [nucleoplasm] R-ATA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030654 Primary root development none Aegilops tauschii AET7Gv20370400 R-ATA-9675476 AET7Gv20370400 [nucleoplasm] R-ATA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030654 Primary root development none Aegilops tauschii AET7Gv20380700 R-ATA-1128173 AET7Gv20380700 [cytosol] R-ATA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119437 Glutathione redox reactions I none Aegilops tauschii AET7Gv20383200 R-ATA-9640675 AET7Gv20383200 [nucleoplasm] R-ATA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640882 Assembly of pre-replication complex none Aegilops tauschii AET7Gv20383200 R-ATA-9640675 AET7Gv20383200 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET7Gv20384100 R-ATA-1125911 AET7Gv20384100 [cytosol] R-ATA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119428 GDP-D-rhamnose biosynthesis none Aegilops tauschii AET7Gv20384100 R-ATA-1125911 AET7Gv20384100 [cytosol] R-ATA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops tauschii AET7Gv20388900 R-ATA-9675335 AET7Gv20388900 [mitochondrial matrix] R-ATA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675508 Root elongation none Aegilops tauschii AET7Gv20408600 R-ATA-9639003 AET7Gv20408600 [cytosol] R-ATA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119434 Phytic acid biosynthesis (lipid-independent) none Aegilops tauschii AET7Gv20411100 R-ATA-1124377 AET7Gv20411100 [cytosol] R-ATA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119452 Galactose degradation II none Aegilops tauschii AET7Gv20411100 R-ATA-1124377 AET7Gv20411100 [cytosol] R-ATA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119465 Sucrose biosynthesis none Aegilops tauschii AET7Gv20421900 R-ATA-5608125 AET7Gv20421900 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET7Gv20433200 R-ATA-8854458 AET7Gv20433200 [cytosol] R-ATA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119276 Choline biosynthesis III none Aegilops tauschii AET7Gv20440500 R-ATA-9611524 LYP6 [plasma membrane] R-ATA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops tauschii AET7Gv20444500 R-ATA-5655095-2 AET7Gv20444500 [Golgi lumen] R-ATA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5655101 Xyloglucan biosynthesis none Aegilops tauschii AET7Gv20444800 R-ATA-5655095 AET7Gv20444800 [Golgi lumen] R-ATA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5655101 Xyloglucan biosynthesis none Aegilops tauschii AET7Gv20444900 R-ATA-5655100-2 AET7Gv20444900 [Golgi lumen] R-ATA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5655101 Xyloglucan biosynthesis none Aegilops tauschii AET7Gv20445000 R-ATA-5655090 AET7Gv20445000 [Golgi lumen] R-ATA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5655101 Xyloglucan biosynthesis none Aegilops tauschii AET7Gv20475100 R-ATA-1122651 AET7Gv20475100 [plastid stroma] R-ATA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119430 Chorismate biosynthesis none Aegilops tauschii AET7Gv20478800 R-ATA-9025469 AET7Gv20478800 [endoplasmic reticulum membrane] R-ATA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119325 Sphingolipid metabolism none Aegilops tauschii AET7Gv20480400 R-ATA-9618126 AET7Gv20480400 [plasma membrane] R-ATA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9618218 Arsenic uptake and detoxification none Aegilops tauschii AET7Gv20483200 R-ATA-9918260 soluble Starch Synthase (SSII-3/SSIIa) [amyloplast] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET7Gv20486200 R-ATA-1124759 AET7Gv20486200 [endosome] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET7Gv20486200 R-ATA-5679306 AET7Gv20486200 [plasma membrane] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET7Gv20497100 R-ATA-1123046 AET7Gv20497100 [cytosol] R-ATA-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119386 UDP-N-acetylgalactosamine biosynthesis none Aegilops tauschii AET7Gv20519400 R-ATA-5149644 AET7Gv20519400 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET7Gv20520900 R-ATA-9826604 AET7Gv20520900 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET7Gv20526800 R-ATA-1128334 AET7Gv20526800 [mitochondrial matrix] R-ATA-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119337 Proline degradation none Aegilops tauschii AET7Gv20535700 R-ATA-9640716 AET7Gv20535700 [nucleoplasm] R-ATA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030654 Primary root development none Aegilops tauschii AET7Gv20535700 R-ATA-9640716 AET7Gv20535700 [nucleoplasm] R-ATA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640882 Assembly of pre-replication complex none Aegilops tauschii AET7Gv20535700 R-ATA-9640716 AET7Gv20535700 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET7Gv20540400 R-ATA-9618197 AET7Gv20540400 [plasma membrane] R-ATA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9618218 Arsenic uptake and detoxification none Aegilops tauschii AET7Gv20557900 R-ATA-1129082-2 AET7Gv20557900 [mitochondrial matrix] R-ATA-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119445 Beta-alanine biosynthesis II none Aegilops tauschii AET7Gv20564700 R-ATA-1130152 AET7Gv20564700 [cytosol] R-ATA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119394 Pantothenate and coenzyme A biosynthesis III none Aegilops tauschii AET7Gv20587800 R-ATA-8986638 AET7Gv20587800 [COPII-coated ER to Golgi transport vesicle] R-ATA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8986768 Anther and pollen development none Aegilops tauschii AET7Gv20588100 R-ATA-8986638-2 AET7Gv20588100 [COPII-coated ER to Golgi transport vesicle] R-ATA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8986768 Anther and pollen development none Aegilops tauschii AET7Gv20592600 R-ATA-9658611 AET7Gv20592600 [plastid stroma] R-ATA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119263 Arginine biosynthesis none Aegilops tauschii AET7Gv20592600 R-ATA-9658611 AET7Gv20592600 [plastid stroma] R-ATA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119539 Ornithine biosynthesis none Aegilops tauschii AET7Gv20592600 R-ATA-9658611 AET7Gv20592600 [plastid stroma] R-ATA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119622 Arginine biosynthesis II (acetyl cycle) none Aegilops tauschii AET7Gv20595200 R-ATA-1127414-2 AET7Gv20595200 [cytosol] R-ATA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119265 Tetrahydrofolate biosynthesis I none Aegilops tauschii AET7Gv20596600 R-ATA-8987571 AET7Gv20596600 [peroxisomal matrix] R-ATA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119312 Photorespiration none Aegilops tauschii AET7Gv20604200 R-ATA-6786987 AET7Gv20604200 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET7Gv20604400 R-ATA-1126107-2 AET7Gv20604400 [cytosol] R-ATA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119332 Jasmonic acid biosynthesis none Aegilops tauschii AET7Gv20604400 R-ATA-1126107-2 AET7Gv20604400 [cytosol] R-ATA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119618 13-LOX and 13-HPL pathway none Aegilops tauschii AET7Gv20605000 R-ATA-9030976 AET7Gv20605000 [nucleoplasm] R-ATA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5654828 Strigolactone signaling none Aegilops tauschii AET7Gv20605000 R-ATA-9030976 AET7Gv20605000 [nucleoplasm] R-ATA-9030908 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030908 Underwater shoot and internode elongation none Aegilops tauschii AET7Gv20605000 R-ATA-9030976 AET7Gv20605000 [nucleoplasm] R-ATA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9035605 Regulation of seed size none Aegilops tauschii AET7Gv20605000 R-ATA-9035631 AET7Gv20605000 [cytosol] R-ATA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9035605 Regulation of seed size none Aegilops tauschii AET7Gv20605000 R-ATA-9030976 AET7Gv20605000 [nucleoplasm] R-ATA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9608575 Reproductive meristem phase change none Aegilops tauschii AET7Gv20605000 R-ATA-9035631 AET7Gv20605000 [cytosol] R-ATA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9608575 Reproductive meristem phase change none Aegilops tauschii AET7Gv20610400 R-ATA-1124496 AET7Gv20610400 [cytosol] R-ATA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119615 Mevalonate pathway none Aegilops tauschii AET7Gv20615300 R-ATA-9918265 ISA1 [amyloplast] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET7Gv20615300 R-ATA-9626527 AET7Gv20615300 [plastid stroma] R-ATA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9626305 Regulatory network of nutrient accumulation none Aegilops tauschii AET7Gv20622000 R-ATA-1124231 AET7Gv20622000 [cytosol] R-ATA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119389 Phenylalanine biosynthesis I none Aegilops tauschii AET7Gv20634200 R-ATA-8858074 AET7Gv20634200 [plasma membrane] R-ATA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8858053 Polar auxin transport none Aegilops tauschii AET7Gv20635600 R-ATA-1124056 AET7Gv20635600 [cytosol] R-ATA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119394 Pantothenate and coenzyme A biosynthesis III none Aegilops tauschii AET7Gv20637900 R-ATA-9035600 AET7Gv20637900 [cytosol] R-ATA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9035605 Regulation of seed size none Aegilops tauschii AET7Gv20637900 R-ATA-9035669 AET7Gv20637900 [nucleoplasm] R-ATA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9035605 Regulation of seed size none Aegilops tauschii AET7Gv20638700 R-ATA-4827081 AET7Gv20638700 [plastid stroma] R-ATA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-4827054 Tetrapyrrole biosynthesis I none Aegilops tauschii AET7Gv20647700 R-ATA-8986682-2 AET7Gv20647700 [extracellular region] R-ATA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8986768 Anther and pollen development none Aegilops tauschii AET7Gv20648100 R-ATA-9611549-2 phospho-phosphorylated-CERK1 [plasma membrane] R-ATA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops tauschii AET7Gv20648100 R-ATA-9611466-2 CERK1 [plasma membrane] R-ATA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops tauschii AET7Gv20648500 R-ATA-9640763 AET7Gv20648500 [nucleoplasm] R-ATA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640887 G1/S transition none Aegilops tauschii AET7Gv20648500 R-ATA-9640885 phospho-AET7Gv20648500 [nucleoplasm] R-ATA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9640887 G1/S transition none Aegilops tauschii AET7Gv20649300 R-ATA-1127254-2 AET7Gv20649300 [cytosol] R-ATA-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119317 Spermine biosynthesis none Aegilops tauschii AET7Gv20649300 R-ATA-1127254-2 AET7Gv20649300 [cytosol] R-ATA-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119343 Spermidine biosynthesis none Aegilops tauschii AET7Gv20649800 R-ATA-1127254 AET7Gv20649800 [cytosol] R-ATA-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119317 Spermine biosynthesis none Aegilops tauschii AET7Gv20649800 R-ATA-1127254 AET7Gv20649800 [cytosol] R-ATA-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119343 Spermidine biosynthesis none Aegilops tauschii AET7Gv20653500 R-ATA-1124791 AET7Gv20653500 [cytosol] R-ATA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119610 Biotin biosynthesis II none Aegilops tauschii AET7Gv20658900 R-ATA-1130277 AET7Gv20658900 [cytosol] R-ATA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119615 Mevalonate pathway none Aegilops tauschii AET7Gv20665600 R-ATA-1123786 AET7Gv20665600 R-ATA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119403 Removal of superoxide radicals none Aegilops tauschii AET7Gv20671000 R-ATA-1127357 AET7Gv20671000 [cytosol] R-ATA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119273 Lysine biosynthesis I none Aegilops tauschii AET7Gv20671000 R-ATA-1127357 AET7Gv20671000 [cytosol] R-ATA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119283 Lysine biosynthesis II none Aegilops tauschii AET7Gv20672800 R-ATA-1127625 AET7Gv20672800 [cytosol] R-ATA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119265 Tetrahydrofolate biosynthesis I none Aegilops tauschii AET7Gv20672800 R-ATA-1127625 AET7Gv20672800 [cytosol] R-ATA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119523 Tetrahydrofolate biosynthesis II none Aegilops tauschii AET7Gv20678000 R-ATA-1127733 AET7Gv20678000 [cytosol] R-ATA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119460 Isoleucine biosynthesis from threonine none Aegilops tauschii AET7Gv20678000 R-ATA-1127733 AET7Gv20678000 [cytosol] R-ATA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119600 Valine biosynthesis none Aegilops tauschii AET7Gv20706000 R-ATA-1122818 AET7Gv20706000 [cytosol] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET7Gv20718600 R-ATA-9918175 AET7Gv20718600 [amyloplast] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET7Gv20732300 R-ATA-1126828 AET7Gv20732300 [plastid] R-ATA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119403 Removal of superoxide radicals none Aegilops tauschii AET7Gv20738700 R-ATA-5632192 AET7Gv20738700 [cytosol] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET7Gv20742600 R-ATA-5632174 AET7Gv20742600 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET7Gv20742600 R-ATA-5632174 AET7Gv20742600 [nucleoplasm] R-ATA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5654828 Strigolactone signaling none Aegilops tauschii AET7Gv20742600 R-ATA-5632174 AET7Gv20742600 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET7Gv20742600 R-ATA-5632174 AET7Gv20742600 [nucleoplasm] R-ATA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9608575 Reproductive meristem phase change none Aegilops tauschii AET7Gv20748800 R-ATA-6788261 AET7Gv20748800 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET7Gv20749500 R-ATA-8933759 AET7Gv20749500 [nucleoplasm] R-ATA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8933811 Circadian rhythm none Aegilops tauschii AET7Gv20754400 R-ATA-9675426 AET7Gv20754400 [nucleoplasm] R-ATA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030654 Primary root development none Aegilops tauschii AET7Gv20754600 R-ATA-5608126 AET7Gv20754600 [plasma membrane] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET7Gv20755300 R-ATA-9684723 AET7Gv20755300 [cytosol] R-ATA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609102 Flower development none Aegilops tauschii AET7Gv20769800 R-ATA-1129867 AET7Gv20769800 [chloroplast] R-ATA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119494 Tryptophan biosynthesis none Aegilops tauschii AET7Gv20771000 R-ATA-1122605 AET7Gv20771000 [cytosol] R-ATA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119341 Galactosylcyclitol biosynthesis none Aegilops tauschii AET7Gv20774200 R-ATA-1127743 AET7Gv20774200 [cytosol] R-ATA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119428 GDP-D-rhamnose biosynthesis none Aegilops tauschii AET7Gv20774200 R-ATA-9681930 AET7Gv20774200 [Golgi membrane] R-ATA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops tauschii AET7Gv20774200 R-ATA-1127743 AET7Gv20774200 [cytosol] R-ATA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops tauschii AET7Gv20778300 R-ATA-1122785 AET7Gv20778300 [cytosol] R-ATA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119273 Lysine biosynthesis I none Aegilops tauschii AET7Gv20778300 R-ATA-1122785 AET7Gv20778300 [cytosol] R-ATA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119283 Lysine biosynthesis II none Aegilops tauschii AET7Gv20778300 R-ATA-1122785 AET7Gv20778300 [cytosol] R-ATA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119570 Cytosolic glycolysis none Aegilops tauschii AET7Gv20782300 R-ATA-1122601 AET7Gv20782300 [mitochondrial inner membrane] R-ATA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119533 TCA cycle (plant) none Aegilops tauschii AET7Gv20802200 R-ATA-5608123 AET7Gv20802200 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET7Gv20807700 R-ATA-8934208 AET7Gv20807700 [nucleoplasm] R-ATA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8934036 Long day regulated expression of florigens none Aegilops tauschii AET7Gv20813500 R-ATA-9025739 AET7Gv20813500 [plasma membrane] R-ATA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9025727 Iron uptake and transport in root vascular system none Aegilops tauschii AET7Gv20813500 R-ATA-9025739 AET7Gv20813500 [plasma membrane] R-ATA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9618218 Arsenic uptake and detoxification none Aegilops tauschii AET7Gv20825300 R-ATA-1123059 AET7Gv20825300 [cytosol] R-ATA-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119317 Spermine biosynthesis none Aegilops tauschii AET7Gv20825300 R-ATA-1123059 AET7Gv20825300 [cytosol] R-ATA-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119343 Spermidine biosynthesis none Aegilops tauschii AET7Gv20837700 R-ATA-5654827 AET7Gv20837700 [nucleoplasm] R-ATA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5654828 Strigolactone signaling none Aegilops tauschii AET7Gv20844100 R-ATA-1129723 AET7Gv20844100 [chloroplast] R-ATA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119494 Tryptophan biosynthesis none Aegilops tauschii AET7Gv20846600 R-ATA-5608120 AET7Gv20846600 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET7Gv20847000 R-ATA-1124613 AET7Gv20847000 [plasma membrane] R-ATA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119314 Cellulose biosynthesis none Aegilops tauschii AET7Gv20850500 R-ATA-9609608-11 AET7Gv20850500 [cytosol] R-ATA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609573 Tricin biosynthesis none Aegilops tauschii AET7Gv20850500 R-ATA-9916171-11 OsOMT [cytosol] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET7Gv20850500 R-ATA-9916312-11 OsOMT [nucleoplasm] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET7Gv20851100 R-ATA-9026139 AET7Gv20851100 [mitochondrion] R-ATA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119458 Glutamate degradation none Aegilops tauschii AET7Gv20851100 R-ATA-1130288 AET7Gv20851100 [cytosol] R-ATA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119610 Biotin biosynthesis II none Aegilops tauschii AET7Gv20852000 R-ATA-1129547 AET7Gv20852000 [cytosol] R-ATA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119389 Phenylalanine biosynthesis I none Aegilops tauschii AET7Gv20852000 R-ATA-1129547 AET7Gv20852000 [cytosol] R-ATA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119400 Methionine biosynthesis II none Aegilops tauschii AET7Gv20852000 R-ATA-1129547 AET7Gv20852000 [cytosol] R-ATA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119506 tyrosine degradation I none Aegilops tauschii AET7Gv20855800 R-ATA-1122403 AET7Gv20855800 [amyloplast] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET7Gv20857700 R-ATA-9918159 AET7Gv20857700 [amyloplast] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET7Gv20870100 R-ATA-1127346 AET7Gv20870100 [cytosol] R-ATA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119316 Phenylpropanoid biosynthesis none Aegilops tauschii AET7Gv20887600 R-ATA-6787012 AET7Gv20887600 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET7Gv20890900 R-ATA-5632120 AET7Gv20890900 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET7Gv20894800 R-ATA-2731026-2 AET7Gv20894800 [endoplasmic reticulum membrane] R-ATA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119557 GA12 biosynthesis none Aegilops tauschii AET7Gv20894800 R-ATA-1130405-2 AET7Gv20894800 [endoplasmic reticulum membrane] R-ATA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119557 GA12 biosynthesis none Aegilops tauschii AET7Gv20894900 R-ATA-2731026 AET7Gv20894900 [endoplasmic reticulum membrane] R-ATA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119557 GA12 biosynthesis none Aegilops tauschii AET7Gv20894900 R-ATA-1130405 AET7Gv20894900 [endoplasmic reticulum membrane] R-ATA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119557 GA12 biosynthesis none Aegilops tauschii AET7Gv20905100 R-ATA-1127523 AET7Gv20905100 [cytosol] R-ATA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Aegilops tauschii AET7Gv20915600 R-ATA-1128914 AET7Gv20915600 [cytosol] R-ATA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119281 Aspartate biosynthesis I none Aegilops tauschii AET7Gv20915600 R-ATA-5632008 AET7Gv20915600 [plastid stroma] R-ATA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119553 Asparagine biosynthesis none Aegilops tauschii AET7Gv20917800 R-ATA-9675352 AET7Gv20917800 [plasma membrane] R-ATA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030654 Primary root development none Aegilops tauschii AET7Gv20923400 R-ATA-1127170-2 AET7Gv20923400 [cytosol] R-ATA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119276 Choline biosynthesis III none Aegilops tauschii AET7Gv20933400 R-ATA-5149694 AET7Gv20933400 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET7Gv20941100 R-ATA-6788201 AET7Gv20941100 [nucleoplasm] R-ATA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6788019 Salicylic acid signaling none Aegilops tauschii AET7Gv20944400 R-ATA-9675803 AET7Gv20944400 [nucleoplasm] R-ATA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675815 Leading strand synthesis none Aegilops tauschii AET7Gv20945800 R-ATA-1123150-8 AET7Gv20945800 [cytosol] R-ATA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops tauschii AET7Gv20945800 R-ATA-1123150-8 AET7Gv20945800 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET7Gv20945800 R-ATA-1123150-8 AET7Gv20945800 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET7Gv20957200 R-ATA-1126400 AET7Gv20957200 [chloroplast] R-ATA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119494 Tryptophan biosynthesis none Aegilops tauschii AET7Gv20978900 R-ATA-1125277 AET7Gv20978900 [cytosol] R-ATA-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119278 PRPP biosynthesis I none Aegilops tauschii AET7Gv20999800 R-ATA-1128178 AET7Gv20999800 [cytosol] R-ATA-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119322 Leucodelphinidin biosynthesis none Aegilops tauschii AET7Gv20999800 R-ATA-1128178 AET7Gv20999800 [cytosol] R-ATA-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Aegilops tauschii AET7Gv20999800 R-ATA-9609575 AET7Gv20999800 [endoplasmic reticulum membrane] R-ATA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609573 Tricin biosynthesis none Aegilops tauschii AET7Gv21000700 R-ATA-1130153 AET7Gv21000700 [cytosol] R-ATA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119332 Jasmonic acid biosynthesis none Aegilops tauschii AET7Gv21000700 R-ATA-6787115 AET7Gv21000700 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET7Gv21004700 R-ATA-4827046 AET7Gv21004700 [plastid stroma] R-ATA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-4827054 Tetrapyrrole biosynthesis I none Aegilops tauschii AET7Gv21005000 R-ATA-5632143 AET7Gv21005000 [nucleoplasm] R-ATA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5632095 Brassinosteroid signaling none Aegilops tauschii AET7Gv21005000 R-ATA-5632143 AET7Gv21005000 [nucleoplasm] R-ATA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops tauschii AET7Gv21007600 R-ATA-9675274 AET7Gv21007600 [nucleoplasm] R-ATA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9030654 Primary root development none Aegilops tauschii AET7Gv21015400 R-ATA-5679502 AET7Gv21015400 [plastid stroma] R-ATA-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5367729 Strigolactone biosynthesis none Aegilops tauschii AET7Gv21016400 R-ATA-3240749 AET7Gv21016400 [cytosol] R-ATA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Aegilops tauschii AET7Gv21016400 R-ATA-9681918 AET7Gv21016400 [cytosol] R-ATA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops tauschii AET7Gv21033900 R-ATA-9638997 AET7Gv21033900 [cytosol] R-ATA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119434 Phytic acid biosynthesis (lipid-independent) none Aegilops tauschii AET7Gv21034400 R-ATA-9639211-2 AET7Gv21034400 [plant-type vacuole membrane] R-ATA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9639136 Response to Aluminum stress none Aegilops tauschii AET7Gv21045400 R-ATA-8933763 AET7Gv21045400 [nucleoplasm] R-ATA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8933811 Circadian rhythm none Aegilops tauschii AET7Gv21047100 R-ATA-9645838 AET7Gv21047100 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET7Gv21047100 R-ATA-9645838 AET7Gv21047100 [nucleoplasm] R-ATA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675782 Maturation none Aegilops tauschii AET7Gv21047100 R-ATA-9645838 AET7Gv21047100 [nucleoplasm] R-ATA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675885 Lagging strand synthesis none Aegilops tauschii AET7Gv21052200 R-ATA-2685721 AET7Gv21052200 [cytosol] R-ATA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119580 IAA biosynthesis II none Aegilops tauschii AET7Gv21063800 R-ATA-1123336 AET7Gv21063800 [cytosol] R-ATA-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119342 Gamma-glutamyl cycle none Aegilops tauschii AET7Gv21063800 R-ATA-1123336 AET7Gv21063800 [cytosol] R-ATA-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119483 Glutathione biosynthesis none Aegilops tauschii AET7Gv21077900 R-ATA-5608129 AET7Gv21077900 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET7Gv21089400 R-ATA-5655071-2 AET7Gv21089400 [Golgi lumen] R-ATA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5655101 Xyloglucan biosynthesis none Aegilops tauschii AET7Gv21092600 R-ATA-9645947 AET7Gv21092600 [nucleoplasm] R-ATA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9645850 Activation of pre-replication complex none Aegilops tauschii AET7Gv21092600 R-ATA-9645947 AET7Gv21092600 [nucleoplasm] R-ATA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675782 Maturation none Aegilops tauschii AET7Gv21092600 R-ATA-9645947 AET7Gv21092600 [nucleoplasm] R-ATA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675815 Leading strand synthesis none Aegilops tauschii AET7Gv21092600 R-ATA-9645947 AET7Gv21092600 [nucleoplasm] R-ATA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675824 DNA replication Initiation none Aegilops tauschii AET7Gv21092600 R-ATA-9645947 AET7Gv21092600 [nucleoplasm] R-ATA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9675885 Lagging strand synthesis none Aegilops tauschii AET7Gv21102600 R-ATA-1130327-2 AET7Gv21102600 [cytosol] R-ATA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119586 Cyanate degradation none Aegilops tauschii AET7Gv21121800 R-ATA-1128734 AET7Gv21121800 [cytosol] R-ATA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119332 Jasmonic acid biosynthesis none Aegilops tauschii AET7Gv21123700 R-ATA-1130025 AET7Gv21123700 [endosome] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET7Gv21123700 R-ATA-5679302 AET7Gv21123700 [plasma membrane] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET7Gv21131200 R-ATA-5608154 AET7Gv21131200 [nucleoplasm] R-ATA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-5608118 Auxin signalling none Aegilops tauschii AET7Gv21134000 R-ATA-1128624 AET7Gv21134000 [mitochondrial inner membrane] R-ATA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119479 Valine degradation none Aegilops tauschii AET7Gv21138300 R-ATA-5606478 AET7Gv21138300 [plastid stroma] R-ATA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119419 Lysine biosynthesis VI none Aegilops tauschii AET7Gv21153800 R-ATA-1127353 AET7Gv21153800 [cytosol] R-ATA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119506 tyrosine degradation I none Aegilops tauschii AET7Gv21156500 R-ATA-9826627 OSMPH1 [nucleoplasm] R-ATA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops tauschii AET7Gv21163300 R-ATA-5149675 AET7Gv21163300 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET7Gv21163300 R-ATA-1123828 AET7Gv21163300 [cytosol] R-ATA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119570 Cytosolic glycolysis none Aegilops tauschii AET7Gv21172600 R-ATA-1125920 AET7Gv21172600 [cytosol] R-ATA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119273 Lysine biosynthesis I none Aegilops tauschii AET7Gv21172600 R-ATA-1125920 AET7Gv21172600 [cytosol] R-ATA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119283 Lysine biosynthesis II none Aegilops tauschii AET7Gv21173300 R-ATA-6787134 AET7Gv21173300 [cytosol] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET7Gv21173300 R-ATA-6787188 AET7Gv21173300 [nucleoplasm] R-ATA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-6787011 Jasmonic acid signaling none Aegilops tauschii AET7Gv21179200 R-ATA-9658573 AET7Gv21179200 [endoplasmic reticulum lumen] R-ATA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119502 Allantoin degradation none Aegilops tauschii AET7Gv21184600 R-ATA-3230566 AET7Gv21184600 [plastid stroma] R-ATA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119519 Calvin cycle none Aegilops tauschii AET7Gv21198200 R-ATA-8858085 AET7Gv21198200 [plasma membrane] R-ATA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-8858053 Polar auxin transport none Aegilops tauschii AET7Gv21198200 R-ATA-8858085 AET7Gv21198200 [plasma membrane] R-ATA-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9924494 Gravity sensing and statolith sedimentation none Aegilops tauschii AET7Gv21198200 R-ATA-9928298 PIN2 [endosome] R-ATA-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9924494 Gravity sensing and statolith sedimentation none Aegilops tauschii AET7Gv21202600 R-ATA-1124540 AET7Gv21202600 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET7Gv21202700 R-ATA-1124540-2 AET7Gv21202700 [cytosol] R-ATA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops tauschii AET7Gv21206900 R-ATA-1123454 AET7Gv21206900 [chloroplast inner membrane] R-ATA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119287 Vitamin E biosynthesis none Aegilops tauschii AET7Gv21216100 R-ATA-1122836 AET7Gv21216100 [cytosol] R-ATA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119586 Cyanate degradation none Aegilops tauschii AET7Gv21216400 R-ATA-1122836-3 AET7Gv21216400 [cytosol] R-ATA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119586 Cyanate degradation none Aegilops tauschii AET7Gv21230800 R-ATA-1125014 AET7Gv21230800 [cytosol] R-ATA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops tauschii AET7Gv21248100 R-ATA-1250419 AET7Gv21248100 [cytosol] R-ATA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119374 Abscisic acid biosynthesis none Aegilops tauschii AET7Gv21248100 R-ATA-1129637 AET7Gv21248100 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET7Gv21271900 R-ATA-1126892 AET7Gv21271900 [cytosol] R-ATA-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119353 Linear furanocoumarin biosynthesis none Aegilops tauschii AET7Gv21320400 R-ATA-9918274 SBE1 [amyloplast] R-ATA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119477 Starch biosynthesis none Aegilops tauschii AET7Gv21320400 R-ATA-9626342 AET7Gv21320400 [plastid stroma] R-ATA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9626305 Regulatory network of nutrient accumulation none Aegilops tauschii AET7Gv21330100 R-ATA-1123150-9 AET7Gv21330100 [cytosol] R-ATA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops tauschii AET7Gv21330100 R-ATA-1123150-9 AET7Gv21330100 [cytosol] R-ATA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119438 Secologanin and strictosidine biosynthesis none Aegilops tauschii AET7Gv21330100 R-ATA-1123150-9 AET7Gv21330100 [cytosol] R-ATA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119486 IAA biosynthesis I none Aegilops tauschii AET7Gv21330200 R-ATA-9609608-7 AET7Gv21330200 [cytosol] R-ATA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609573 Tricin biosynthesis none Aegilops tauschii AET7Gv21330200 R-ATA-9916171-7 OsOMT [cytosol] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET7Gv21330200 R-ATA-9916312-7 OsOMT [nucleoplasm] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET7Gv21330500 R-ATA-9609608-10 AET7Gv21330500 [cytosol] R-ATA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9609573 Tricin biosynthesis none Aegilops tauschii AET7Gv21330500 R-ATA-9916171-10 OsOMT [cytosol] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET7Gv21330500 R-ATA-9916312-10 OsOMT [nucleoplasm] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AET7Gv21330600 R-ATA-1128244 AET7Gv21330600 [chloroplast] R-ATA-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119348 Ent-kaurene biosynthesis none Aegilops tauschii AET7Gv21342500 R-ATA-1124861 AET7Gv21342500 [plastid stroma] R-ATA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-1119449 Carotenoid biosynthesis none Aegilops tauschii AET7Gv21347300 R-ATA-9916305-2 AET7Gv21347300 [nucleoplasm] R-ATA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATA-9916190 Root angle formation: elongation and curvature response none Aegilops tauschii AMDW01030575.1_FG001 R-OLO-1124671 AMDW01030575.1_FG001 [cytosol] R-OLO-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-1119353 Linear furanocoumarin biosynthesis none Oryza longistaminata AMDW01035388.1_FG001 R-OLO-1122601-2 AMDW01035388.1_FG001 [mitochondrial inner membrane] R-OLO-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-1119533 TCA cycle (plant) none Oryza longistaminata AMDW01036335.1_FG001 R-OLO-1122632-2 AMDW01036335.1_FG001 [cytosol] R-OLO-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-1119331 Cysteine biosynthesis I none Oryza longistaminata AMDW01037241.1_FG001 R-OLO-1128944 AMDW01037241.1_FG001 [cytosol] R-OLO-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-1119438 Secologanin and strictosidine biosynthesis none Oryza longistaminata AMDW01037516.1_FG001 R-OLO-1125615 AMDW01037516.1_FG001 [cytosol] R-OLO-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-1119334 Ethylene biosynthesis from methionine none Oryza longistaminata AMDW01037516.1_FG001 R-OLO-1125615 AMDW01037516.1_FG001 [cytosol] R-OLO-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-1119501 S-adenosyl-L-methionine cycle none Oryza longistaminata AMDW01037516.1_FG001 R-OLO-1125615 AMDW01037516.1_FG001 [cytosol] R-OLO-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-1119624 Methionine salvage pathway none Oryza longistaminata AMDW01037516.1_FG001 R-OLO-9025738 AMDW01037516.1_FG001 [cytosol] R-OLO-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-9025754 Mugineic acid biosynthesis none Oryza longistaminata AMDW01038095.1_FG001 R-OLO-9025789 AMDW01038095.1_FG001 [cytosol] R-OLO-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-9025754 Mugineic acid biosynthesis none Oryza longistaminata AMDW01038330.1_FG001 R-OLO-1124274 AMDW01038330.1_FG001 [cytosol] R-OLO-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-1119513 Pinobanksin biosynthesis none Oryza longistaminata AMDW01038330.1_FG001 R-OLO-1124274 AMDW01038330.1_FG001 [cytosol] R-OLO-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-1119531 Flavonoid biosynthesis none Oryza longistaminata AMDW01039591.1_FG001 R-OLO-4415055 AMDW01039591.1_FG001 [cytosol] R-OLO-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-3899351 Abscisic acid (ABA) mediated signaling none Oryza longistaminata AMDW01039591.1_FG001 R-OLO-4415073 phospho-AMDW01039591.1_FG001 [cytosol] R-OLO-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-3899351 Abscisic acid (ABA) mediated signaling none Oryza longistaminata AMDW01039591.1_FG001 R-OLO-4415055 AMDW01039591.1_FG001 [cytosol] R-OLO-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-9639861 Development of root hair none Oryza longistaminata AMDW01039787.1_FG001 R-OLO-1130101 AMDW01039787.1_FG001 [amyloplast] R-OLO-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-1119477 Starch biosynthesis none Oryza longistaminata AMDW01039838.1_FG001 R-OLO-5654957 AMDW01039838.1_FG001 [Golgi lumen] R-OLO-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-5654909 Xylan biosynthesis none Oryza longistaminata AMDW01040104.1_FG001 R-OLO-4752546 AMDW01040104.1_FG001 [plastid stroma] R-OLO-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-1119498 Phylloquinone biosynthesis none Oryza longistaminata AMDW01040167.1_FG001 R-OLO-1123092 AMDW01040167.1_FG001 [cytosol] R-OLO-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-1119278 PRPP biosynthesis I none Oryza longistaminata AMDW01040209.1_FG001 R-OLO-1130247 AMDW01040209.1_FG001 [plastid stroma] R-OLO-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-1119519 Calvin cycle none Oryza longistaminata AMDW01040281.1_FG001 R-OLO-1130055 AMDW01040281.1_FG001 [endoplasmic reticulum membrane] R-OLO-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-1119260 Cardiolipin biosynthesis none Oryza longistaminata AMDW01040281.1_FG001 R-OLO-1130055 AMDW01040281.1_FG001 [endoplasmic reticulum membrane] R-OLO-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-1119402 Phospholipid biosynthesis I none Oryza longistaminata AMDW01040398.1_FG001 R-OLO-5608203 AMDW01040398.1_FG001 [nucleoplasm] R-OLO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-5608118 Auxin signalling none Oryza longistaminata AMDW01040398.1_FG001 R-OLO-5608203 AMDW01040398.1_FG001 [nucleoplasm] R-OLO-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-9608575 Reproductive meristem phase change none Oryza longistaminata AMDW01040398.1_FG001 R-OLO-9658968 AMDW01040398.1_FG001 [cytosol] R-OLO-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-9608575 Reproductive meristem phase change none Oryza longistaminata AMDW01040484.1_FG001 R-OLO-6787173 AMDW01040484.1_FG001 [nucleoplasm] R-OLO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-6787011 Jasmonic acid signaling none Oryza longistaminata AMDW01040484.1_FG001 R-OLO-6786972 AMDW01040484.1_FG001 [cytosol] R-OLO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-6787011 Jasmonic acid signaling none Oryza longistaminata AMDW01040563.1_FG001 R-OLO-1126647-2 AMDW01040563.1_FG001 [cytosol] R-OLO-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-1119273 Lysine biosynthesis I none Oryza longistaminata AMDW01040563.1_FG001 R-OLO-1126647-2 AMDW01040563.1_FG001 [cytosol] R-OLO-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-1119283 Lysine biosynthesis II none Oryza longistaminata AMDW01040620.1_FG001 R-OLO-9826645 NH5 [nucleoplasm] R-OLO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza longistaminata AMDW01040699.1_FG001 R-OLO-6786984 AMDW01040699.1_FG001 [nucleoplasm] R-OLO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-6787011 Jasmonic acid signaling none Oryza longistaminata AMDW01040699.1_FG001 R-OLO-6787051 AMDW01040699.1_FG001 [cytosol] R-OLO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-6787011 Jasmonic acid signaling none Oryza longistaminata AMDW01040765.1_FG001 R-OLO-3899348 AMDW01040765.1_FG001 [cytosol] R-OLO-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-3899351 Abscisic acid (ABA) mediated signaling none Oryza longistaminata AMDW01040765.1_FG001 R-OLO-3899348 AMDW01040765.1_FG001 [cytosol] R-OLO-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-9639861 Development of root hair none Oryza longistaminata AMDW01040900.1_FG001 R-OLO-6787184 AMDW01040900.1_FG001 [cytosol] R-OLO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-6787011 Jasmonic acid signaling none Oryza longistaminata AMDW01040903.1_FG001 R-OLO-1126238 AMDW01040903.1_FG001 [chloroplast] R-OLO-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-1119494 Tryptophan biosynthesis none Oryza longistaminata AMDW01040907.1_FG001 R-OLO-8878987 AMDW01040907.1_FG001 [nucleoplasm] R-OLO-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-8879007 Response to cold temperature none Oryza longistaminata AMDW01075951.1_FG002 R-OLO-8986605 AMDW01075951.1_FG002 [mitochondrial matrix] R-OLO-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-1119312 Photorespiration none Oryza longistaminata AMDW01075951.1_FG002 R-OLO-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-OLO-1119351 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-1119351 Mitochondrial pyruvate metabolism none Oryza longistaminata AMDW01075951.1_FG002 R-OLO-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-OLO-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-1119533 TCA cycle (plant) none Oryza longistaminata AMDW01132519.1_FG001 R-OLO-9930168 AMDW01132519.1_FG001 [nucleoplasm] R-OLO-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-9766881 TF network involved in salinity response none Oryza longistaminata AMDW01141477.1_FG001 R-OLO-9640731 AMDW01141477.1_FG001 [nucleoplasm] R-OLO-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-OLO-9640882 Assembly of pre-replication complex none Oryza longistaminata AMTR_s00001p00035420 R-ATR-1128641 AMTR_s00001p00035420 [cytosol] R-ATR-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119331 Cysteine biosynthesis I none Amborella trichopoda AMTR_s00001p00048980 R-ATR-9918274 SBE1 [amyloplast] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00001p00048980 R-ATR-9626342 AMTR_s00001p00048980 [plastid stroma] R-ATR-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9626305 Regulatory network of nutrient accumulation none Amborella trichopoda AMTR_s00001p00067420 R-ATR-1127087 AMTR_s00001p00067420 [cytosol] R-ATR-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119438 Secologanin and strictosidine biosynthesis none Amborella trichopoda AMTR_s00001p00080980 R-ATR-1128263 AMTR_s00001p00080980 [plastid stroma] R-ATR-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119509 Histidine biosynthesis I none Amborella trichopoda AMTR_s00001p00081940 R-ATR-9618171 AMTR_s00001p00081940 [plasma membrane] R-ATR-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9618218 Arsenic uptake and detoxification none Amborella trichopoda AMTR_s00001p00112910 R-ATR-9025471 AMTR_s00001p00112910 [endoplasmic reticulum membrane] R-ATR-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119325 Sphingolipid metabolism none Amborella trichopoda AMTR_s00001p00112910 R-ATR-1127934 AMTR_s00001p00112910 [cytosol] R-ATR-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119610 Biotin biosynthesis II none Amborella trichopoda AMTR_s00001p00115760 R-ATR-9639892 AMTR_s00001p00115760 [cell wall] R-ATR-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9639861 Development of root hair none Amborella trichopoda AMTR_s00001p00128450 R-ATR-9640761 AMTR_s00001p00128450 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00001p00128450 R-ATR-9640761 AMTR_s00001p00128450 [nucleoplasm] R-ATR-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675824 DNA replication Initiation none Amborella trichopoda AMTR_s00001p00129390 R-ATR-1125584 AMTR_s00001p00129390 [plastid stroma] R-ATR-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119509 Histidine biosynthesis I none Amborella trichopoda AMTR_s00001p00143940 R-ATR-1127899 AMTR_s00001p00143940 [cytosol] R-ATR-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119370 Sterol biosynthesis none Amborella trichopoda AMTR_s00001p00146970 R-ATR-1129187 AMTR_s00001p00146970 [cytosol] R-ATR-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119276 Choline biosynthesis III none Amborella trichopoda AMTR_s00001p00156400 R-ATR-1130136 AMTR_s00001p00156400 [mitochondrial matrix] R-ATR-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119533 TCA cycle (plant) none Amborella trichopoda AMTR_s00001p00156400 R-ATR-1130136 AMTR_s00001p00156400 [mitochondrial matrix] R-ATR-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119540 Leucine biosynthesis none Amborella trichopoda AMTR_s00001p00172880 R-ATR-5149676 AMTR_s00001p00172880 [plastid stroma] R-ATR-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119519 Calvin cycle none Amborella trichopoda AMTR_s00001p00188890 R-ATR-1124757 AMTR_s00001p00188890 [cytosol] R-ATR-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119465 Sucrose biosynthesis none Amborella trichopoda AMTR_s00001p00188890 R-ATR-1124757 AMTR_s00001p00188890 [cytosol] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00001p00200380 R-ATR-1129851 AMTR_s00001p00200380 [mitochondrial matrix] R-ATR-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119533 TCA cycle (plant) none Amborella trichopoda AMTR_s00001p00200380 R-ATR-1129851 AMTR_s00001p00200380 [mitochondrial matrix] R-ATR-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119540 Leucine biosynthesis none Amborella trichopoda AMTR_s00001p00206080 R-ATR-1123757 AMTR_s00001p00206080 [cytosol] R-ATR-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119460 Isoleucine biosynthesis from threonine none Amborella trichopoda AMTR_s00001p00206080 R-ATR-1123757 AMTR_s00001p00206080 [cytosol] R-ATR-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119473 Cytokinins-O-glucoside biosynthesis none Amborella trichopoda AMTR_s00001p00206080 R-ATR-1123757 AMTR_s00001p00206080 [cytosol] R-ATR-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119496 Pantothenate biosynthesis I none Amborella trichopoda AMTR_s00001p00206080 R-ATR-1123757 AMTR_s00001p00206080 [cytosol] R-ATR-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119540 Leucine biosynthesis none Amborella trichopoda AMTR_s00001p00206080 R-ATR-1123757 AMTR_s00001p00206080 [cytosol] R-ATR-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119544 Pantothenate biosynthesis II none Amborella trichopoda AMTR_s00001p00215760 R-ATR-9826692 AMTR_s00001p00215760 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00001p00228610 R-ATR-1127357 AMTR_s00001p00228610 [cytosol] R-ATR-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119273 Lysine biosynthesis I none Amborella trichopoda AMTR_s00001p00228610 R-ATR-1127357 AMTR_s00001p00228610 [cytosol] R-ATR-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119283 Lysine biosynthesis II none Amborella trichopoda AMTR_s00001p00248450 R-ATR-1129922 AMTR_s00001p00248450 [plastid stroma] R-ATR-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119464 Methylerythritol phosphate pathway none Amborella trichopoda AMTR_s00001p00258560 R-ATR-6788007-2 AMTR_s00001p00258560 [cytosol] R-ATR-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6788019 Salicylic acid signaling none Amborella trichopoda AMTR_s00001p00260820 R-ATR-6788007 AMTR_s00001p00260820 [cytosol] R-ATR-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6788019 Salicylic acid signaling none Amborella trichopoda AMTR_s00001p00269720 R-ATR-9658643 AMTR_s00001p00269720 [cytosol] R-ATR-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119567 Beta-alanine biosynthesis I none Amborella trichopoda AMTR_s00001p00269980 R-ATR-1128613 AMTR_s00001p00269980 [cytosol] R-ATR-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119316 Phenylpropanoid biosynthesis none Amborella trichopoda AMTR_s00001p00270760 R-ATR-1129892 AMTR_s00001p00270760 [cytosol] R-ATR-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119334 Ethylene biosynthesis from methionine none Amborella trichopoda AMTR_s00001p00270760 R-ATR-1129892 AMTR_s00001p00270760 [cytosol] R-ATR-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119624 Methionine salvage pathway none Amborella trichopoda AMTR_s00001p00271310 R-ATR-4754220 AMTR_s00001p00271310 [plastid stroma] R-ATR-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119449 Carotenoid biosynthesis none Amborella trichopoda AMTR_s00001p00271310 R-ATR-1126847 AMTR_s00001p00271310 [cytosol] R-ATR-1119492 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119492 Lactucaxanthin biosynthesis none Amborella trichopoda AMTR_s00001p00272250 R-ATR-9609608 AMTR_s00001p00272250 [cytosol] R-ATR-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9609573 Tricin biosynthesis none Amborella trichopoda AMTR_s00001p00272250 R-ATR-9916171 OsOMT [cytosol] R-ATR-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9916190 Root angle formation: elongation and curvature response none Amborella trichopoda AMTR_s00001p00272250 R-ATR-9916312 OsOMT [nucleoplasm] R-ATR-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9916190 Root angle formation: elongation and curvature response none Amborella trichopoda AMTR_s00001p00272270 R-ATR-8933759 AMTR_s00001p00272270 [nucleoplasm] R-ATR-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8933811 Circadian rhythm none Amborella trichopoda AMTR_s00002p00017770 R-ATR-1128980 AMTR_s00002p00017770 [cytosol] R-ATR-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119586 Cyanate degradation none Amborella trichopoda AMTR_s00002p00072230 R-ATR-1123211 AMTR_s00002p00072230 [cytosol] R-ATR-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Amborella trichopoda AMTR_s00002p00072230 R-ATR-1123211 AMTR_s00002p00072230 [cytosol] R-ATR-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119370 Sterol biosynthesis none Amborella trichopoda AMTR_s00002p00072230 R-ATR-1123211 AMTR_s00002p00072230 [cytosol] R-ATR-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119439 Cholesterol biosynthesis III (via desmosterol) none Amborella trichopoda AMTR_s00002p00072230 R-ATR-1123211 AMTR_s00002p00072230 [cytosol] R-ATR-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119559 Cholesterol biosynthesis I none Amborella trichopoda AMTR_s00002p00075740 R-ATR-2685721 AMTR_s00002p00075740 [cytosol] R-ATR-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119580 IAA biosynthesis II none Amborella trichopoda AMTR_s00002p00088870 R-ATR-1123404-2 AMTR_s00002p00088870 [peroxisomal matrix] R-ATR-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119407 Ureide biosynthesis none Amborella trichopoda AMTR_s00002p00128010 R-ATR-1125399 AMTR_s00002p00128010 [plastid] R-ATR-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119403 Removal of superoxide radicals none Amborella trichopoda AMTR_s00002p00145340 R-ATR-5146760 AMTR_s00002p00145340 [mitochondrial matrix] R-ATR-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119533 TCA cycle (plant) none Amborella trichopoda AMTR_s00002p00153790 R-ATR-8933728 AMTR_s00002p00153790 [nucleoplasm] R-ATR-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8933811 Circadian rhythm none Amborella trichopoda AMTR_s00002p00158920 R-ATR-9658589 AMTR_s00002p00158920 [endoplasmic reticulum lumen] R-ATR-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119502 Allantoin degradation none Amborella trichopoda AMTR_s00002p00167510 R-ATR-1128380 AMTR_s00002p00167510 [plastid stroma] R-ATR-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119430 Chorismate biosynthesis none Amborella trichopoda AMTR_s00002p00225810 R-ATR-6787119 AMTR_s00002p00225810 [nucleoplasm] R-ATR-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6787011 Jasmonic acid signaling none Amborella trichopoda AMTR_s00002p00227840 R-ATR-5631969 AMTR_s00002p00227840 [mitochondrial matrix] R-ATR-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119289 Arginine degradation none Amborella trichopoda AMTR_s00002p00227840 R-ATR-5633275 AMTR_s00002p00227840 [cytosol] R-ATR-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119495 Citrulline biosynthesis none Amborella trichopoda AMTR_s00002p00253410 R-ATR-1126131 AMTR_s00002p00253410 [cytosol] R-ATR-1119528 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119528 Beta-alanine betaine biosynthesis none Amborella trichopoda AMTR_s00002p00254160 R-ATR-1125587 AMTR_s00002p00254160 [cytosol] R-ATR-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119379 Flavin biosynthesis none Amborella trichopoda AMTR_s00002p00259350 R-ATR-9639810 AMTR_s00002p00259350 [cell wall] R-ATR-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9639861 Development of root hair none Amborella trichopoda AMTR_s00002p00261280 R-ATR-1125926 AMTR_s00002p00261280 [cytosol] R-ATR-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119273 Lysine biosynthesis I none Amborella trichopoda AMTR_s00002p00261280 R-ATR-1125926 AMTR_s00002p00261280 [cytosol] R-ATR-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119283 Lysine biosynthesis II none Amborella trichopoda AMTR_s00002p00261280 R-ATR-1125926 AMTR_s00002p00261280 [cytosol] R-ATR-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119295 Homoserine biosynthesis none Amborella trichopoda AMTR_s00002p00261280 R-ATR-5606498 AMTR_s00002p00261280 [plastid stroma] R-ATR-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119419 Lysine biosynthesis VI none Amborella trichopoda AMTR_s00002p00262880 R-ATR-1129851-2 AMTR_s00002p00262880 [mitochondrial matrix] R-ATR-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119533 TCA cycle (plant) none Amborella trichopoda AMTR_s00002p00262880 R-ATR-1129851-2 AMTR_s00002p00262880 [mitochondrial matrix] R-ATR-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119540 Leucine biosynthesis none Amborella trichopoda AMTR_s00002p00263400 R-ATR-9658563 AMTR_s00002p00263400 [endoplasmic reticulum lumen] R-ATR-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119502 Allantoin degradation none Amborella trichopoda AMTR_s00002p00266310 R-ATR-1127299 AMTR_s00002p00266310 [cytosol] R-ATR-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119298 Glutathione redox reactions II none Amborella trichopoda AMTR_s00002p00266310 R-ATR-1127299 AMTR_s00002p00266310 [cytosol] R-ATR-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119437 Glutathione redox reactions I none Amborella trichopoda AMTR_s00002p00267940 R-ATR-1129781 AMTR_s00002p00267940 [chloroplast] R-ATR-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119494 Tryptophan biosynthesis none Amborella trichopoda AMTR_s00002p00268070 R-ATR-1129781-2 AMTR_s00002p00268070 [chloroplast] R-ATR-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119494 Tryptophan biosynthesis none Amborella trichopoda AMTR_s00002p00268550 R-ATR-9682506 AMTR_s00002p00268550 [cytosol] R-ATR-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119410 Ascorbate biosynthesis none Amborella trichopoda AMTR_s00002p00269800 R-ATR-3321270 AMTR_s00002p00269800 [chloroplast inner membrane] R-ATR-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119287 Vitamin E biosynthesis none Amborella trichopoda AMTR_s00002p00269930 R-ATR-1128257 AMTR_s00002p00269930 [plastid stroma] R-ATR-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119529 Sulfate activation for sulfonation none Amborella trichopoda AMTR_s00002p00270520 R-ATR-8934084 AMTR_s00002p00270520 [nucleoplasm] R-ATR-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9928995 Drought escape (DE) via ABA-dependent pathway none Amborella trichopoda AMTR_s00002p00270580 R-ATR-9924379 HSFA2D [nucleoplasm] R-ATR-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9924451 Shoot (tiller) formation and regulation of tiller angle none Amborella trichopoda AMTR_s00002p00271180 R-ATR-1127705 AMTR_s00002p00271180 [plastid stroma] R-ATR-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119519 Calvin cycle none Amborella trichopoda AMTR_s00002p00271870 R-ATR-1128594 AMTR_s00002p00271870 [cytosol] R-ATR-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119349 S-methylmethionine cycle none Amborella trichopoda AMTR_s00002p00271870 R-ATR-1128594 AMTR_s00002p00271870 [cytosol] R-ATR-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119400 Methionine biosynthesis II none Amborella trichopoda AMTR_s00003p00079190 R-ATR-8933856 AMTR_s00003p00079190 [nucleoplasm] R-ATR-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8933811 Circadian rhythm none Amborella trichopoda AMTR_s00003p00079190 R-ATR-8933748 AMTR_s00003p00079190 [cytosol] R-ATR-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8933811 Circadian rhythm none Amborella trichopoda AMTR_s00003p00079190 R-ATR-8933856 AMTR_s00003p00079190 [nucleoplasm] R-ATR-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8934036 Long day regulated expression of florigens none Amborella trichopoda AMTR_s00003p00079190 R-ATR-8933856 AMTR_s00003p00079190 [nucleoplasm] R-ATR-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9928995 Drought escape (DE) via ABA-dependent pathway none Amborella trichopoda AMTR_s00003p00142040 R-ATR-5632301 AMTR_s00003p00142040 [nucleoplasm] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00003p00142040 R-ATR-5632301 AMTR_s00003p00142040 [nucleoplasm] R-ATR-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5654828 Strigolactone signaling none Amborella trichopoda AMTR_s00003p00142040 R-ATR-5632301 AMTR_s00003p00142040 [nucleoplasm] R-ATR-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6787011 Jasmonic acid signaling none Amborella trichopoda AMTR_s00003p00149890 R-ATR-9675857 AMTR_s00003p00149890 [nucleoplasm] R-ATR-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675782 Maturation none Amborella trichopoda AMTR_s00003p00152830 R-ATR-1129161 AMTR_s00003p00152830 [amyloplast] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00003p00164060 R-ATR-1127490 AMTR_s00003p00164060 [cytosol] R-ATR-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119389 Phenylalanine biosynthesis I none Amborella trichopoda AMTR_s00003p00191990 R-ATR-1124032 AMTR_s00003p00191990 [cytosol] R-ATR-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119540 Leucine biosynthesis none Amborella trichopoda AMTR_s00003p00229970 R-ATR-5632188 AMTR_s00003p00229970 [nucleoplasm] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00003p00232080 R-ATR-1128707 AMTR_s00003p00232080 [cytosol] R-ATR-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Amborella trichopoda AMTR_s00003p00232080 R-ATR-1128707 AMTR_s00003p00232080 [cytosol] R-ATR-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119370 Sterol biosynthesis none Amborella trichopoda AMTR_s00003p00232080 R-ATR-1128707 AMTR_s00003p00232080 [cytosol] R-ATR-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119439 Cholesterol biosynthesis III (via desmosterol) none Amborella trichopoda AMTR_s00003p00232080 R-ATR-1128707 AMTR_s00003p00232080 [cytosol] R-ATR-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119559 Cholesterol biosynthesis I none Amborella trichopoda AMTR_s00003p00233980 R-ATR-1129507 AMTR_s00003p00233980 [cytosol] R-ATR-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119452 Galactose degradation II none Amborella trichopoda AMTR_s00003p00257050 R-ATR-9640767 AMTR_s00003p00257050 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00003p00257050 R-ATR-9640767 AMTR_s00003p00257050 [nucleoplasm] R-ATR-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675824 DNA replication Initiation none Amborella trichopoda AMTR_s00003p00266880 R-ATR-9025487 AMTR_s00003p00266880 [cytosol] R-ATR-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119325 Sphingolipid metabolism none Amborella trichopoda AMTR_s00004p00048050 R-ATR-1125584-2 AMTR_s00004p00048050 [plastid stroma] R-ATR-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119509 Histidine biosynthesis I none Amborella trichopoda AMTR_s00004p00055080 R-ATR-1126794-2 AMTR_s00004p00055080 [cytosol] R-ATR-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119331 Cysteine biosynthesis I none Amborella trichopoda AMTR_s00004p00055230 R-ATR-1126794 AMTR_s00004p00055230 [cytosol] R-ATR-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119331 Cysteine biosynthesis I none Amborella trichopoda AMTR_s00004p00056290 R-ATR-1126794-3 AMTR_s00004p00056290 [cytosol] R-ATR-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119331 Cysteine biosynthesis I none Amborella trichopoda AMTR_s00004p00075280 R-ATR-9611864 AMTR_s00004p00075280 [mitochondrial matrix] R-ATR-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119479 Valine degradation none Amborella trichopoda AMTR_s00004p00097520 R-ATR-9675838 AMTR_s00004p00097520 [nucleoplasm] R-ATR-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675815 Leading strand synthesis none Amborella trichopoda AMTR_s00004p00101110 R-ATR-1127031 AMTR_s00004p00101110 [cytosol] R-ATR-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119460 Isoleucine biosynthesis from threonine none Amborella trichopoda AMTR_s00004p00117110 R-ATR-1125151 AMTR_s00004p00117110 [cytosol] R-ATR-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119400 Methionine biosynthesis II none Amborella trichopoda AMTR_s00004p00117110 R-ATR-1125151 AMTR_s00004p00117110 [cytosol] R-ATR-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119501 S-adenosyl-L-methionine cycle none Amborella trichopoda AMTR_s00004p00128030 R-ATR-1250418-4 AMTR_s00004p00128030 [cytosol] R-ATR-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119374 Abscisic acid biosynthesis none Amborella trichopoda AMTR_s00004p00128030 R-ATR-1129637-4 AMTR_s00004p00128030 [cytosol] R-ATR-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119486 IAA biosynthesis I none Amborella trichopoda AMTR_s00004p00128400 R-ATR-1250418-2 AMTR_s00004p00128400 [cytosol] R-ATR-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119374 Abscisic acid biosynthesis none Amborella trichopoda AMTR_s00004p00128400 R-ATR-1129637-2 AMTR_s00004p00128400 [cytosol] R-ATR-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119486 IAA biosynthesis I none Amborella trichopoda AMTR_s00004p00148720 R-ATR-1127467 AMTR_s00004p00148720 [cytosol] R-ATR-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119456 Brassinosteroid biosynthesis II none Amborella trichopoda AMTR_s00004p00149160 R-ATR-1127467-2 AMTR_s00004p00149160 [cytosol] R-ATR-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119456 Brassinosteroid biosynthesis II none Amborella trichopoda AMTR_s00004p00156880 R-ATR-1127089 AMTR_s00004p00156880 [cytosol] R-ATR-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119465 Sucrose biosynthesis none Amborella trichopoda AMTR_s00004p00160120 R-ATR-9675803 AMTR_s00004p00160120 [nucleoplasm] R-ATR-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675815 Leading strand synthesis none Amborella trichopoda AMTR_s00004p00163660 R-ATR-1126604 AMTR_s00004p00163660 [cytosol] R-ATR-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119438 Secologanin and strictosidine biosynthesis none Amborella trichopoda AMTR_s00004p00165390 R-ATR-9826669 OsYABBY6 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00004p00175690 R-ATR-5632111 AMTR_s00004p00175690 [cytosol] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00004p00175690 R-ATR-5632216 phospho-AMTR_s00004p00175690 [cytosol] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00004p00175690 R-ATR-5632145 phospho-AMTR_s00004p00175690 [nucleoplasm] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00004p00179740 R-ATR-5632341 AMTR_s00004p00179740 [cytosol] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00004p00179740 R-ATR-5632221 phospho-AMTR_s00004p00179740 [cytosol] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00004p00179740 R-ATR-5632170 phospho-AMTR_s00004p00179740 [nucleoplasm] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00004p00210450 R-ATR-1129846 AMTR_s00004p00210450 [mitochondrion] R-ATR-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119337 Proline degradation none Amborella trichopoda AMTR_s00004p00210450 R-ATR-1129846 AMTR_s00004p00210450 [mitochondrion] R-ATR-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119458 Glutamate degradation none Amborella trichopoda AMTR_s00004p00270040 R-ATR-9675357 AMTR_s00004p00270040 [nucleoplasm] R-ATR-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9030680 Crown root development none Amborella trichopoda AMTR_s00005p00255230 R-ATR-5655007 AMTR_s00005p00255230 [Golgi lumen] R-ATR-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5655010 Xylogalacturonan biosynthesis none Amborella trichopoda AMTR_s00005p00260980 R-ATR-1124786 AMTR_s00005p00260980 [cytosol] R-ATR-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119276 Choline biosynthesis III none Amborella trichopoda AMTR_s00005p00262140 R-ATR-9658676 AMTR_s00005p00262140 [cytosol] R-ATR-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119567 Beta-alanine biosynthesis I none Amborella trichopoda AMTR_s00005p00266570 R-ATR-1125540 AMTR_s00005p00266570 [cytosol] R-ATR-1119303 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119303 Pyridoxamine anabolism none Amborella trichopoda AMTR_s00005p00266570 R-ATR-1125540 AMTR_s00005p00266570 [cytosol] R-ATR-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119534 Pyridoxal 5'-phosphate salvage pathway none Amborella trichopoda AMTR_s00005p00268350 R-ATR-9916160 AMTR_s00005p00268350 [nucleoplasm] R-ATR-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9916190 Root angle formation: elongation and curvature response none Amborella trichopoda AMTR_s00006p00149820 R-ATR-9640785 AMTR_s00006p00149820 [nucleoplasm] R-ATR-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640882 Assembly of pre-replication complex none Amborella trichopoda AMTR_s00006p00149820 R-ATR-9640785 AMTR_s00006p00149820 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00006p00177250 R-ATR-9025372 AMTR_s00006p00177250 [endoplasmic reticulum membrane] R-ATR-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119402 Phospholipid biosynthesis I none Amborella trichopoda AMTR_s00006p00241880 R-ATR-1127192-2 AMTR_s00006p00241880 [cytosol] R-ATR-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119291 Nitrate assimilation none Amborella trichopoda AMTR_s00006p00241880 R-ATR-1127192-2 AMTR_s00006p00241880 [cytosol] R-ATR-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119293 Glutamine biosynthesis I none Amborella trichopoda AMTR_s00006p00241880 R-ATR-1127192-2 AMTR_s00006p00241880 [cytosol] R-ATR-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119443 Ammonia assimilation cycle none Amborella trichopoda AMTR_s00006p00250310 R-ATR-5632199 AMTR_s00006p00250310 [nucleoplasm] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00006p00258700 R-ATR-9675790 AMTR_s00006p00258700 [nucleoplasm] R-ATR-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675824 DNA replication Initiation none Amborella trichopoda AMTR_s00006p00259220 R-ATR-4827046 AMTR_s00006p00259220 [plastid stroma] R-ATR-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-4827054 Tetrapyrrole biosynthesis I none Amborella trichopoda AMTR_s00006p00262340 R-ATR-1125533 AMTR_s00006p00262340 [cytosol] R-ATR-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119304 Putrescine biosynthesis II none Amborella trichopoda AMTR_s00006p00262710 R-ATR-8934168 AMTR_s00006p00262710 [nucleoplasm] R-ATR-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8934036 Long day regulated expression of florigens none Amborella trichopoda AMTR_s00006p00262710 R-ATR-8934168 AMTR_s00006p00262710 [nucleoplasm] R-ATR-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8934108 Short day regulated expression of florigens none Amborella trichopoda AMTR_s00006p00262710 R-ATR-9920270 AMTR_s00006p00262710 [nucleoplasm] R-ATR-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8934108 Short day regulated expression of florigens none Amborella trichopoda AMTR_s00006p00262710 R-ATR-8934168 AMTR_s00006p00262710 [nucleoplasm] R-ATR-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9928946 Drought escape (DE) via ABA-independent pathway none Amborella trichopoda AMTR_s00006p00262750 R-ATR-9025439 AMTR_s00006p00262750 [endoplasmic reticulum membrane] R-ATR-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119325 Sphingolipid metabolism none Amborella trichopoda AMTR_s00006p00263320 R-ATR-8854445 AMTR_s00006p00263320 [cytosol] R-ATR-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119276 Choline biosynthesis III none Amborella trichopoda AMTR_s00006p00263490 R-ATR-1130416 AMTR_s00006p00263490 [mitochondrial matrix] R-ATR-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119337 Proline degradation none Amborella trichopoda AMTR_s00006p00263490 R-ATR-1130416 AMTR_s00006p00263490 [mitochondrial matrix] R-ATR-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119495 Citrulline biosynthesis none Amborella trichopoda AMTR_s00006p00265000 R-ATR-1126400 AMTR_s00006p00265000 [chloroplast] R-ATR-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119494 Tryptophan biosynthesis none Amborella trichopoda AMTR_s00006p00266790 R-ATR-9681915 AMTR_s00006p00266790 [Golgi membrane] R-ATR-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119574 UDP-L-arabinose biosynthesis and transport none Amborella trichopoda AMTR_s00006p00268060 R-ATR-1128334 AMTR_s00006p00268060 [mitochondrial matrix] R-ATR-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119337 Proline degradation none Amborella trichopoda AMTR_s00006p00268590 R-ATR-1127254-3 AMTR_s00006p00268590 [cytosol] R-ATR-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119317 Spermine biosynthesis none Amborella trichopoda AMTR_s00006p00268590 R-ATR-1127254-3 AMTR_s00006p00268590 [cytosol] R-ATR-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119343 Spermidine biosynthesis none Amborella trichopoda AMTR_s00006p00268680 R-ATR-1127254 AMTR_s00006p00268680 [cytosol] R-ATR-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119317 Spermine biosynthesis none Amborella trichopoda AMTR_s00006p00268680 R-ATR-1127254 AMTR_s00006p00268680 [cytosol] R-ATR-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119343 Spermidine biosynthesis none Amborella trichopoda AMTR_s00006p00269110 R-ATR-1125638 AMTR_s00006p00269110 [cytosol] R-ATR-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119516 Trehalose biosynthesis I none Amborella trichopoda AMTR_s00007p00094450 R-ATR-5654797 AMTR_s00007p00094450 [nucleoplasm] R-ATR-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5654828 Strigolactone signaling none Amborella trichopoda AMTR_s00007p00105480 R-ATR-9916309 CPK3 [plasma membrane] R-ATR-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9916190 Root angle formation: elongation and curvature response none Amborella trichopoda AMTR_s00007p00117820 R-ATR-1129616 AMTR_s00007p00117820 [cytosol] R-ATR-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119300 Glycolipid desaturation none Amborella trichopoda AMTR_s00007p00127410 R-ATR-1124145 AMTR_s00007p00127410 [mitochondrial matrix] R-ATR-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119445 Beta-alanine biosynthesis II none Amborella trichopoda AMTR_s00007p00156370 R-ATR-1124190 AMTR_s00007p00156370 [plastid stroma] R-ATR-1119412 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119412 Chlorophyll a biosynthesis I none Amborella trichopoda AMTR_s00007p00179930 R-ATR-9025294 AMTR_s00007p00179930 [cytosol] R-ATR-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119267 Phenylalanine degradation III none Amborella trichopoda AMTR_s00007p00179930 R-ATR-1127774 AMTR_s00007p00179930 [cytosol] R-ATR-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119460 Isoleucine biosynthesis from threonine none Amborella trichopoda AMTR_s00007p00179930 R-ATR-1127774 AMTR_s00007p00179930 [cytosol] R-ATR-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119486 IAA biosynthesis I none Amborella trichopoda AMTR_s00007p00179930 R-ATR-1124944 AMTR_s00007p00179930 [plastid stroma] R-ATR-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119502 Allantoin degradation none Amborella trichopoda AMTR_s00007p00179930 R-ATR-1127774 AMTR_s00007p00179930 [cytosol] R-ATR-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119600 Valine biosynthesis none Amborella trichopoda AMTR_s00007p00188070 R-ATR-3240748-2 AMTR_s00007p00188070 [cytosol] R-ATR-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Amborella trichopoda AMTR_s00007p00198370 R-ATR-1124234 AMTR_s00007p00198370 [cytosol] R-ATR-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119436 Peptidoglycan biosynthesis I none Amborella trichopoda AMTR_s00007p00206520 R-ATR-1129539 AMTR_s00007p00206520 [cytosol] R-ATR-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119610 Biotin biosynthesis II none Amborella trichopoda AMTR_s00007p00227160 R-ATR-9675399 AMTR_s00007p00227160 [nucleoplasm] R-ATR-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9030654 Primary root development none Amborella trichopoda AMTR_s00007p00238780 R-ATR-9645872 AMTR_s00007p00238780 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00007p00238950 R-ATR-9826681 EREBP129 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00007p00250490 R-ATR-8854127 AMTR_s00007p00250490 [cytosol] R-ATR-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119556 Choline biosynthesis I none Amborella trichopoda AMTR_s00007p00262640 R-ATR-9607102 AMTR_s00007p00262640 [mitochondrion] R-ATR-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9607185 Generation of superoxide radicals none Amborella trichopoda AMTR_s00007p00266650 R-ATR-8987499 AMTR_s00007p00266650 [peroxisomal matrix] R-ATR-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119312 Photorespiration none Amborella trichopoda AMTR_s00007p00266650 R-ATR-1130222 AMTR_s00007p00266650 [cytosol] R-ATR-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119596 Glutamate biosynthesis I none Amborella trichopoda AMTR_s00007p00267580 R-ATR-5608125 AMTR_s00007p00267580 [nucleoplasm] R-ATR-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5608118 Auxin signalling none Amborella trichopoda AMTR_s00008p00058550 R-ATR-1130304 AMTR_s00008p00058550 [cytosol] R-ATR-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119291 Nitrate assimilation none Amborella trichopoda AMTR_s00008p00166810 R-ATR-9918264 ISA3 [amyloplast] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00008p00198780 R-ATR-9826680 AMTR_s00008p00198780 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00008p00210700 R-ATR-1128950 AMTR_s00008p00210700 [cytosol] R-ATR-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119379 Flavin biosynthesis none Amborella trichopoda AMTR_s00008p00262380 R-ATR-1129934 AMTR_s00008p00262380 [plastid stroma] R-ATR-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119430 Chorismate biosynthesis none Amborella trichopoda AMTR_s00009p00192200 R-ATR-5225766 AMTR_s00009p00192200 [nucleoplasm] R-ATR-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5225756 Ethylene mediated signaling none Amborella trichopoda AMTR_s00009p00217140 R-ATR-6787113 AMTR_s00009p00217140 [nucleoplasm] R-ATR-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6787011 Jasmonic acid signaling none Amborella trichopoda AMTR_s00009p00236210 R-ATR-1122593 AMTR_s00009p00236210 [cytosol] R-ATR-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119436 Peptidoglycan biosynthesis I none Amborella trichopoda AMTR_s00009p00236210 R-ATR-1122593 AMTR_s00009p00236210 [cytosol] R-ATR-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119523 Tetrahydrofolate biosynthesis II none Amborella trichopoda AMTR_s00009p00236210 R-ATR-1122593 AMTR_s00009p00236210 [cytosol] R-ATR-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119617 Folate polyglutamylation I none Amborella trichopoda AMTR_s00009p00240120 R-ATR-1125834 AMTR_s00009p00240120 [cytosol] R-ATR-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119379 Flavin biosynthesis none Amborella trichopoda AMTR_s00009p00255020 R-ATR-1126615-2 AMTR_s00009p00255020 [cytosol] R-ATR-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119437 Glutathione redox reactions I none Amborella trichopoda AMTR_s00009p00255140 R-ATR-1126615 AMTR_s00009p00255140 [cytosol] R-ATR-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119437 Glutathione redox reactions I none Amborella trichopoda AMTR_s00009p00259320 R-ATR-9930308 SNAC2 (OsNAC6) [nucleoplasm] R-ATR-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9766881 TF network involved in salinity response none Amborella trichopoda AMTR_s00009p00262080 R-ATR-5146758 AMTR_s00009p00262080 [mitochondrial matrix] R-ATR-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119533 TCA cycle (plant) none Amborella trichopoda AMTR_s00009p00262530 R-ATR-1125556 AMTR_s00009p00262530 [cytosol] R-ATR-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119410 Ascorbate biosynthesis none Amborella trichopoda AMTR_s00009p00262530 R-ATR-1125556 AMTR_s00009p00262530 [cytosol] R-ATR-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119628 GDP-mannose metabolism none Amborella trichopoda AMTR_s00009p00262810 R-ATR-1125670 AMTR_s00009p00262810 [cytosol] R-ATR-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119393 Asparagine degradation I none Amborella trichopoda AMTR_s00009p00265610 R-ATR-9025224 AMTR_s00009p00265610 [endoplasmic reticulum lumen] R-ATR-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119502 Allantoin degradation none Amborella trichopoda AMTR_s00009p00266200 R-ATR-9025541 AMTR_s00009p00266200 [endoplasmic reticulum membrane] R-ATR-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119325 Sphingolipid metabolism none Amborella trichopoda AMTR_s00009p00267330 R-ATR-8879004 AMTR_s00009p00267330 [nucleoplasm] R-ATR-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8879007 Response to cold temperature none Amborella trichopoda AMTR_s00009p00268760 R-ATR-8933833 AMTR_s00009p00268760 [nucleoplasm] R-ATR-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8933811 Circadian rhythm none Amborella trichopoda AMTR_s00009p00268760 R-ATR-8933833 AMTR_s00009p00268760 [nucleoplasm] R-ATR-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9928995 Drought escape (DE) via ABA-dependent pathway none Amborella trichopoda AMTR_s00009p00268850 R-ATR-1130247 AMTR_s00009p00268850 [plastid stroma] R-ATR-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119519 Calvin cycle none Amborella trichopoda AMTR_s00010p00098700 R-ATR-9826606 AMTR_s00010p00098700 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00010p00131910 R-ATR-1126513 AMTR_s00010p00131910 [cytosol] R-ATR-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119332 Jasmonic acid biosynthesis none Amborella trichopoda AMTR_s00010p00148880 R-ATR-5679455 AMTR_s00010p00148880 [nucleoplasm] R-ATR-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5679411 Gibberellin signaling none Amborella trichopoda AMTR_s00010p00148880 R-ATR-6787020 AMTR_s00010p00148880 [cytosol] R-ATR-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6787011 Jasmonic acid signaling none Amborella trichopoda AMTR_s00010p00159850 R-ATR-1128632 AMTR_s00010p00159850 [cytosol] R-ATR-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119465 Sucrose biosynthesis none Amborella trichopoda AMTR_s00010p00159850 R-ATR-1128632 AMTR_s00010p00159850 [cytosol] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00010p00177810 R-ATR-1123096 AMTR_s00010p00177810 [mitochondrial inner membrane] R-ATR-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119533 TCA cycle (plant) none Amborella trichopoda AMTR_s00010p00190650 R-ATR-1129082 AMTR_s00010p00190650 [mitochondrial matrix] R-ATR-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119445 Beta-alanine biosynthesis II none Amborella trichopoda AMTR_s00010p00205090 R-ATR-1129964 AMTR_s00010p00205090 [cytosol] R-ATR-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119378 Myo-inositol biosynthesis none Amborella trichopoda AMTR_s00010p00205090 R-ATR-1129964 AMTR_s00010p00205090 [cytosol] R-ATR-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119434 Phytic acid biosynthesis (lipid-independent) none Amborella trichopoda AMTR_s00010p00210410 R-ATR-5654756 AMTR_s00010p00210410 [cytosol] R-ATR-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119281 Aspartate biosynthesis I none Amborella trichopoda AMTR_s00010p00210410 R-ATR-1123648 AMTR_s00010p00210410 [plastid] R-ATR-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119506 tyrosine degradation I none Amborella trichopoda AMTR_s00010p00210410 R-ATR-5631992 AMTR_s00010p00210410 [plastid stroma] R-ATR-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119553 Asparagine biosynthesis none Amborella trichopoda AMTR_s00010p00216200 R-ATR-5149683 AMTR_s00010p00216200 [plastid stroma] R-ATR-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119519 Calvin cycle none Amborella trichopoda AMTR_s00010p00221790 R-ATR-5606521 AMTR_s00010p00221790 [plastid stroma] R-ATR-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119419 Lysine biosynthesis VI none Amborella trichopoda AMTR_s00010p00239530 R-ATR-8934251 AMTR_s00010p00239530 [nucleoplasm] R-ATR-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8934036 Long day regulated expression of florigens none Amborella trichopoda AMTR_s00010p00239530 R-ATR-8934251 AMTR_s00010p00239530 [nucleoplasm] R-ATR-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8934108 Short day regulated expression of florigens none Amborella trichopoda AMTR_s00010p00245900 R-ATR-1130308 AMTR_s00010p00245900 [plastid stroma] R-ATR-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119430 Chorismate biosynthesis none Amborella trichopoda AMTR_s00010p00248740 R-ATR-9025443 AMTR_s00010p00248740 [endoplasmic reticulum membrane] R-ATR-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119325 Sphingolipid metabolism none Amborella trichopoda AMTR_s00010p00259130 R-ATR-9025463 AMTR_s00010p00259130 [endoplasmic reticulum membrane] R-ATR-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119325 Sphingolipid metabolism none Amborella trichopoda AMTR_s00010p00260950 R-ATR-9618131 AMTR_s00010p00260950 [plasma membrane] R-ATR-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9618218 Arsenic uptake and detoxification none Amborella trichopoda AMTR_s00010p00262670 R-ATR-1122261 AMTR_s00010p00262670 [plastid stroma] R-ATR-1119602 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119602 Phytyl-PP biosynthesis none Amborella trichopoda AMTR_s00010p00262670 R-ATR-1122261 AMTR_s00010p00262670 [plastid stroma] R-ATR-1119605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119605 Chlorophyll a biosynthesis II none Amborella trichopoda AMTR_s00010p00263000 R-ATR-1130101 AMTR_s00010p00263000 [amyloplast] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00010p00266320 R-ATR-9766876 AMTR_s00010p00266320 [nucleoplasm] R-ATR-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9766881 TF network involved in salinity response none Amborella trichopoda AMTR_s00010p00266320 R-ATR-9766876 AMTR_s00010p00266320 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00010p00267460 R-ATR-5655076 AMTR_s00010p00267460 [Golgi lumen] R-ATR-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5655101 Xyloglucan biosynthesis none Amborella trichopoda AMTR_s00011p00049200 R-ATR-1126549 AMTR_s00011p00049200 [cytosol] R-ATR-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119486 IAA biosynthesis I none Amborella trichopoda AMTR_s00011p00201790 R-ATR-1127562 AMTR_s00011p00201790 [amyloplast] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00011p00201790 R-ATR-1130466 AMTR_s00011p00201790 [cytosol] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00011p00222000 R-ATR-5138486 AMTR_s00011p00222000 [plastid stroma] R-ATR-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119263 Arginine biosynthesis none Amborella trichopoda AMTR_s00011p00222000 R-ATR-1123709 AMTR_s00011p00222000 [cytosol] R-ATR-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119318 Proline biosynthesis V (from arginine) none Amborella trichopoda AMTR_s00011p00222000 R-ATR-1123709 AMTR_s00011p00222000 [cytosol] R-ATR-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119444 Canavanine biosynthesis none Amborella trichopoda AMTR_s00011p00230840 R-ATR-1123717 AMTR_s00011p00230840 [cytosol] R-ATR-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119395 Maackiain biosynthesis none Amborella trichopoda AMTR_s00011p00230840 R-ATR-1123717 AMTR_s00011p00230840 [cytosol] R-ATR-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119453 Medicarpin biosynthesis none Amborella trichopoda AMTR_s00011p00238180 R-ATR-9916252 OsEGT1 [nucleoplasm] R-ATR-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9916190 Root angle formation: elongation and curvature response none Amborella trichopoda AMTR_s00011p00243940 R-ATR-9675860-2 AMTR_s00011p00243940 [nucleoplasm] R-ATR-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675824 DNA replication Initiation none Amborella trichopoda AMTR_s00011p00252750 R-ATR-1126888 AMTR_s00011p00252750 [cytosol] R-ATR-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119360 Fructan biosynthesis none Amborella trichopoda AMTR_s00011p00254080 R-ATR-1127815 AMTR_s00011p00254080 [cytosol] R-ATR-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119450 Homocysteine biosynthesis none Amborella trichopoda AMTR_s00011p00254250 R-ATR-1125570 AMTR_s00011p00254250 [cytosol] R-ATR-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119450 Homocysteine biosynthesis none Amborella trichopoda AMTR_s00011p00255760 R-ATR-9924558 NCED1 [plastid] R-ATR-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Amborella trichopoda AMTR_s00011p00261570 R-ATR-1128857 AMTR_s00011p00261570 [cytosol] R-ATR-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119609 Phaseic acid biosynthesis none Amborella trichopoda AMTR_s00011p00265890 R-ATR-9675866 AMTR_s00011p00265890 [nucleoplasm] R-ATR-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675782 Maturation none Amborella trichopoda AMTR_s00011p00265890 R-ATR-9675866 AMTR_s00011p00265890 [nucleoplasm] R-ATR-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675815 Leading strand synthesis none Amborella trichopoda AMTR_s00011p00265890 R-ATR-9675866 AMTR_s00011p00265890 [nucleoplasm] R-ATR-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675885 Lagging strand synthesis none Amborella trichopoda AMTR_s00011p00266060 R-ATR-1122932 AMTR_s00011p00266060 [cytosol] R-ATR-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119317 Spermine biosynthesis none Amborella trichopoda AMTR_s00011p00266060 R-ATR-1122932 AMTR_s00011p00266060 [cytosol] R-ATR-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119343 Spermidine biosynthesis none Amborella trichopoda AMTR_s00011p00266060 R-ATR-1122932 AMTR_s00011p00266060 [cytosol] R-ATR-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119446 Lysine degradation I none Amborella trichopoda AMTR_s00011p00266060 R-ATR-5654765 AMTR_s00011p00266060 [cytosol] R-ATR-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119446 Lysine degradation I none Amborella trichopoda AMTR_s00012p00059980 R-ATR-3315084 AMTR_s00012p00059980 [cytosol] R-ATR-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119342 Gamma-glutamyl cycle none Amborella trichopoda AMTR_s00012p00060770 R-ATR-3315084-2 AMTR_s00012p00060770 [cytosol] R-ATR-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119342 Gamma-glutamyl cycle none Amborella trichopoda AMTR_s00012p00117440 R-ATR-9658613 AMTR_s00012p00117440 [plastid stroma] R-ATR-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119263 Arginine biosynthesis none Amborella trichopoda AMTR_s00012p00117440 R-ATR-9658613 AMTR_s00012p00117440 [plastid stroma] R-ATR-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119622 Arginine biosynthesis II (acetyl cycle) none Amborella trichopoda AMTR_s00012p00122270 R-ATR-1126799 AMTR_s00012p00122270 [cytosol] R-ATR-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119428 GDP-D-rhamnose biosynthesis none Amborella trichopoda AMTR_s00012p00122270 R-ATR-1126799 AMTR_s00012p00122270 [cytosol] R-ATR-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119563 UDP-D-xylose biosynthesis none Amborella trichopoda AMTR_s00012p00122270 R-ATR-1126799 AMTR_s00012p00122270 [cytosol] R-ATR-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Amborella trichopoda AMTR_s00012p00138230 R-ATR-9640708-2 phospho-AMTR_s00012p00138230 [nucleoplasm] R-ATR-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640760 G1 phase none Amborella trichopoda AMTR_s00012p00138230 R-ATR-9640770-2 AMTR_s00012p00138230 [nucleoplasm] R-ATR-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640760 G1 phase none Amborella trichopoda AMTR_s00012p00138230 R-ATR-9640708-2 phospho-AMTR_s00012p00138230 [nucleoplasm] R-ATR-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640887 G1/S transition none Amborella trichopoda AMTR_s00012p00190030 R-ATR-1125877 AMTR_s00012p00190030 [cytosol] R-ATR-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119456 Brassinosteroid biosynthesis II none Amborella trichopoda AMTR_s00012p00219470 R-ATR-5149632 AMTR_s00012p00219470 [plastid stroma] R-ATR-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119519 Calvin cycle none Amborella trichopoda AMTR_s00012p00226630 R-ATR-9684723 AMTR_s00012p00226630 [cytosol] R-ATR-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9609102 Flower development none Amborella trichopoda AMTR_s00012p00230440 R-ATR-9684723-2 AMTR_s00012p00230440 [cytosol] R-ATR-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9609102 Flower development none Amborella trichopoda AMTR_s00012p00243090 R-ATR-9766887 AMTR_s00012p00243090 [nucleoplasm] R-ATR-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9766881 TF network involved in salinity response none Amborella trichopoda AMTR_s00012p00259090 R-ATR-1127539 AMTR_s00012p00259090 [cytosol] R-ATR-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Amborella trichopoda AMTR_s00012p00259090 R-ATR-1127539 AMTR_s00012p00259090 [cytosol] R-ATR-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119439 Cholesterol biosynthesis III (via desmosterol) none Amborella trichopoda AMTR_s00012p00259090 R-ATR-1127539 AMTR_s00012p00259090 [cytosol] R-ATR-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119559 Cholesterol biosynthesis I none Amborella trichopoda AMTR_s00012p00259520 R-ATR-4415078 AMTR_s00012p00259520 [cytosol] R-ATR-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-3899351 Abscisic acid (ABA) mediated signaling none Amborella trichopoda AMTR_s00012p00262290 R-ATR-1130202-2 AMTR_s00012p00262290 [cytosol] R-ATR-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119410 Ascorbate biosynthesis none Amborella trichopoda AMTR_s00012p00262630 R-ATR-1130202 AMTR_s00012p00262630 [cytosol] R-ATR-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119410 Ascorbate biosynthesis none Amborella trichopoda AMTR_s00012p00263260 R-ATR-1127913 AMTR_s00012p00263260 [cytosol] R-ATR-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119495 Citrulline biosynthesis none Amborella trichopoda AMTR_s00012p00263260 R-ATR-1127913 AMTR_s00012p00263260 [cytosol] R-ATR-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119631 Proline biosynthesis I none Amborella trichopoda AMTR_s00012p00264440 R-ATR-1125928 AMTR_s00012p00264440 [cytosol] R-ATR-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119484 Folate polyglutamylation II none Amborella trichopoda AMTR_s00012p00264440 R-ATR-1125928 AMTR_s00012p00264440 [cytosol] R-ATR-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119523 Tetrahydrofolate biosynthesis II none Amborella trichopoda AMTR_s00012p00264440 R-ATR-1125928 AMTR_s00012p00264440 [cytosol] R-ATR-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119617 Folate polyglutamylation I none Amborella trichopoda AMTR_s00013p00036200 R-ATR-1127414 AMTR_s00013p00036200 [cytosol] R-ATR-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119265 Tetrahydrofolate biosynthesis I none Amborella trichopoda AMTR_s00013p00050430 R-ATR-1127382-2 AMTR_s00013p00050430 [cytosol] R-ATR-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119460 Isoleucine biosynthesis from threonine none Amborella trichopoda AMTR_s00013p00050430 R-ATR-1127382-2 AMTR_s00013p00050430 [cytosol] R-ATR-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119600 Valine biosynthesis none Amborella trichopoda AMTR_s00013p00056780 R-ATR-9645941 AMTR_s00013p00056780 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00013p00151060 R-ATR-9646043 AMTR_s00013p00151060 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00013p00151060 R-ATR-9646043 AMTR_s00013p00151060 [nucleoplasm] R-ATR-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675815 Leading strand synthesis none Amborella trichopoda AMTR_s00013p00151060 R-ATR-9646043 AMTR_s00013p00151060 [nucleoplasm] R-ATR-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675824 DNA replication Initiation none Amborella trichopoda AMTR_s00013p00151060 R-ATR-9646043 AMTR_s00013p00151060 [nucleoplasm] R-ATR-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675885 Lagging strand synthesis none Amborella trichopoda AMTR_s00013p00165620 R-ATR-1130231 AMTR_s00013p00165620 [endoplasmic reticulum membrane] R-ATR-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119325 Sphingolipid metabolism none Amborella trichopoda AMTR_s00013p00172160 R-ATR-1127527 AMTR_s00013p00172160 [cytosol] R-ATR-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Amborella trichopoda AMTR_s00013p00181250 R-ATR-1127597 AMTR_s00013p00181250 [cytosol] R-ATR-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119615 Mevalonate pathway none Amborella trichopoda AMTR_s00013p00204220 R-ATR-9612406 AMTR_s00013p00204220 [mitochondrial matrix] R-ATR-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119612 Cysteine degradation none Amborella trichopoda AMTR_s00013p00235370 R-ATR-9675500 AMTR_s00013p00235370 [endoplasmic reticulum membrane] R-ATR-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9030654 Primary root development none Amborella trichopoda AMTR_s00013p00237060 R-ATR-1124138 AMTR_s00013p00237060 [cytosol] R-ATR-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119394 Pantothenate and coenzyme A biosynthesis III none Amborella trichopoda AMTR_s00013p00239330 R-ATR-1124905 AMTR_s00013p00239330 [plastid stroma] R-ATR-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119519 Calvin cycle none Amborella trichopoda AMTR_s00013p00241000 R-ATR-8858112 AMTR_s00013p00241000 [plasma membrane] R-ATR-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8858053 Polar auxin transport none Amborella trichopoda AMTR_s00013p00257170 R-ATR-1129921 AMTR_s00013p00257170 [cytosol] R-ATR-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119428 GDP-D-rhamnose biosynthesis none Amborella trichopoda AMTR_s00013p00257170 R-ATR-1129921 AMTR_s00013p00257170 [cytosol] R-ATR-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Amborella trichopoda AMTR_s00013p00261120 R-ATR-1129029 AMTR_s00013p00261120 [cytosol] R-ATR-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119501 S-adenosyl-L-methionine cycle none Amborella trichopoda AMTR_s00014p00122790 R-ATR-1125417 AMTR_s00014p00122790 [cytosol] R-ATR-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119265 Tetrahydrofolate biosynthesis I none Amborella trichopoda AMTR_s00014p00122790 R-ATR-1125417 AMTR_s00014p00122790 [cytosol] R-ATR-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119523 Tetrahydrofolate biosynthesis II none Amborella trichopoda AMTR_s00014p00128310 R-ATR-1127738 AMTR_s00014p00128310 [cytosol] R-ATR-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119273 Lysine biosynthesis I none Amborella trichopoda AMTR_s00014p00128310 R-ATR-1127738 AMTR_s00014p00128310 [cytosol] R-ATR-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119283 Lysine biosynthesis II none Amborella trichopoda AMTR_s00014p00128310 R-ATR-5606514 AMTR_s00014p00128310 [plastid stroma] R-ATR-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119419 Lysine biosynthesis VI none Amborella trichopoda AMTR_s00014p00243510 R-ATR-8986605 AMTR_s00014p00243510 [mitochondrial matrix] R-ATR-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119312 Photorespiration none Amborella trichopoda AMTR_s00014p00243510 R-ATR-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-ATR-1119351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119351 Mitochondrial pyruvate metabolism none Amborella trichopoda AMTR_s00014p00243510 R-ATR-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-ATR-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119533 TCA cycle (plant) none Amborella trichopoda AMTR_s00014p00246150 R-ATR-9612372 AMTR_s00014p00246150 [mitochondrial matrix] R-ATR-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119612 Cysteine degradation none Amborella trichopoda AMTR_s00014p00253070 R-ATR-1127753 AMTR_s00014p00253070 [cytosol] R-ATR-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119278 PRPP biosynthesis I none Amborella trichopoda AMTR_s00014p00253620 R-ATR-1130162 AMTR_s00014p00253620 [chloroplast] R-ATR-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119494 Tryptophan biosynthesis none Amborella trichopoda AMTR_s00015p00038940 R-ATR-1125967 AMTR_s00015p00038940 [cytosol] R-ATR-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119316 Phenylpropanoid biosynthesis none Amborella trichopoda AMTR_s00015p00193090 R-ATR-1127324 AMTR_s00015p00193090 [cytosol] R-ATR-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119624 Methionine salvage pathway none Amborella trichopoda AMTR_s00015p00229650 R-ATR-9826647 AMTR_s00015p00229650 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00016p00126140 R-ATR-5608218 AMTR_s00016p00126140 [nucleoplasm] R-ATR-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5608118 Auxin signalling none Amborella trichopoda AMTR_s00016p00126140 R-ATR-5608218 AMTR_s00016p00126140 [nucleoplasm] R-ATR-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9608575 Reproductive meristem phase change none Amborella trichopoda AMTR_s00016p00126140 R-ATR-9658968 AMTR_s00016p00126140 [cytosol] R-ATR-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9608575 Reproductive meristem phase change none Amborella trichopoda AMTR_s00016p00168950 R-ATR-5608102 AMTR_s00016p00168950 [nucleoplasm] R-ATR-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5608118 Auxin signalling none Amborella trichopoda AMTR_s00016p00169310 R-ATR-1126714 AMTR_s00016p00169310 [cytosol] R-ATR-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119273 Lysine biosynthesis I none Amborella trichopoda AMTR_s00016p00169310 R-ATR-1126714 AMTR_s00016p00169310 [cytosol] R-ATR-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119283 Lysine biosynthesis II none Amborella trichopoda AMTR_s00016p00169310 R-ATR-1126714 AMTR_s00016p00169310 [cytosol] R-ATR-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119295 Homoserine biosynthesis none Amborella trichopoda AMTR_s00016p00169310 R-ATR-5606484 AMTR_s00016p00169310 [plastid stroma] R-ATR-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119419 Lysine biosynthesis VI none Amborella trichopoda AMTR_s00016p00170610 R-ATR-8879006 AMTR_s00016p00170610 [nucleoplasm] R-ATR-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8879007 Response to cold temperature none Amborella trichopoda AMTR_s00016p00187060 R-ATR-1125182 AMTR_s00016p00187060 [plastid stroma] R-ATR-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119430 Chorismate biosynthesis none Amborella trichopoda AMTR_s00016p00208490 R-ATR-4827081 AMTR_s00016p00208490 [plastid stroma] R-ATR-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-4827054 Tetrapyrrole biosynthesis I none Amborella trichopoda AMTR_s00016p00239570 R-ATR-9640763 AMTR_s00016p00239570 [nucleoplasm] R-ATR-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640887 G1/S transition none Amborella trichopoda AMTR_s00016p00239570 R-ATR-9640885 phospho-AMTR_s00016p00239570 [nucleoplasm] R-ATR-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640887 G1/S transition none Amborella trichopoda AMTR_s00016p00242770 R-ATR-9640753 AMTR_s00016p00242770 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00016p00242770 R-ATR-9640753 AMTR_s00016p00242770 [nucleoplasm] R-ATR-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675824 DNA replication Initiation none Amborella trichopoda AMTR_s00016p00251680 R-ATR-1127873 AMTR_s00016p00251680 [plastid stroma] R-ATR-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119424 Plastid glycolysis none Amborella trichopoda AMTR_s00016p00251680 R-ATR-1127873 AMTR_s00016p00251680 [plastid stroma] R-ATR-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119519 Calvin cycle none Amborella trichopoda AMTR_s00017p00041150 R-ATR-9675481 AMTR_s00017p00041150 [cytosol] R-ATR-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9030654 Primary root development none Amborella trichopoda AMTR_s00017p00156440 R-ATR-1126955 AMTR_s00017p00156440 [plastid] R-ATR-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119407 Ureide biosynthesis none Amborella trichopoda AMTR_s00017p00177990 R-ATR-1125550 AMTR_s00017p00177990 [cytosol] R-ATR-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119623 Acyl-CoA synthetase pathway none Amborella trichopoda AMTR_s00017p00187240 R-ATR-9639111 AMTR_s00017p00187240 [plasma membrane] R-ATR-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9639136 Response to Aluminum stress none Amborella trichopoda AMTR_s00017p00188570 R-ATR-9639111-3 AMTR_s00017p00188570 [plasma membrane] R-ATR-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9639136 Response to Aluminum stress none Amborella trichopoda AMTR_s00017p00189670 R-ATR-9639111-2 AMTR_s00017p00189670 [plasma membrane] R-ATR-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9639136 Response to Aluminum stress none Amborella trichopoda AMTR_s00017p00221560 R-ATR-9645950 AMTR_s00017p00221560 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00017p00221560 R-ATR-9645950 AMTR_s00017p00221560 [nucleoplasm] R-ATR-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675815 Leading strand synthesis none Amborella trichopoda AMTR_s00017p00221560 R-ATR-9645950 AMTR_s00017p00221560 [nucleoplasm] R-ATR-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675824 DNA replication Initiation none Amborella trichopoda AMTR_s00017p00221560 R-ATR-9645950 AMTR_s00017p00221560 [nucleoplasm] R-ATR-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675885 Lagging strand synthesis none Amborella trichopoda AMTR_s00017p00241740 R-ATR-9675807 AMTR_s00017p00241740 [nucleoplasm] R-ATR-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675782 Maturation none Amborella trichopoda AMTR_s00017p00241740 R-ATR-9675807 AMTR_s00017p00241740 [nucleoplasm] R-ATR-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675815 Leading strand synthesis none Amborella trichopoda AMTR_s00017p00241740 R-ATR-9675807 AMTR_s00017p00241740 [nucleoplasm] R-ATR-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675885 Lagging strand synthesis none Amborella trichopoda AMTR_s00017p00255800 R-ATR-9611889 AMTR_s00017p00255800 [mitochondrial matrix] R-ATR-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119479 Valine degradation none Amborella trichopoda AMTR_s00018p00062350 R-ATR-1123296 AMTR_s00018p00062350 [chloroplast envelope] R-ATR-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119402 Phospholipid biosynthesis I none Amborella trichopoda AMTR_s00018p00068150 R-ATR-2685732 AMTR_s00018p00068150 [cytosol] R-ATR-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119580 IAA biosynthesis II none Amborella trichopoda AMTR_s00018p00204090 R-ATR-9618057 AMTR_s00018p00204090 [cytosol] R-ATR-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9618218 Arsenic uptake and detoxification none Amborella trichopoda AMTR_s00018p00208330 R-ATR-9675820 AMTR_s00018p00208330 [nucleoplasm] R-ATR-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675824 DNA replication Initiation none Amborella trichopoda AMTR_s00019p00109640 R-ATR-1122932-2 AMTR_s00019p00109640 [cytosol] R-ATR-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119317 Spermine biosynthesis none Amborella trichopoda AMTR_s00019p00109640 R-ATR-1122932-2 AMTR_s00019p00109640 [cytosol] R-ATR-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119343 Spermidine biosynthesis none Amborella trichopoda AMTR_s00019p00109640 R-ATR-1122932-2 AMTR_s00019p00109640 [cytosol] R-ATR-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119446 Lysine degradation I none Amborella trichopoda AMTR_s00019p00109640 R-ATR-5654765-2 AMTR_s00019p00109640 [cytosol] R-ATR-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119446 Lysine degradation I none Amborella trichopoda AMTR_s00019p00132110 R-ATR-1129203 AMTR_s00019p00132110 [cytosol] R-ATR-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119428 GDP-D-rhamnose biosynthesis none Amborella trichopoda AMTR_s00019p00132110 R-ATR-1129203 AMTR_s00019p00132110 [cytosol] R-ATR-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Amborella trichopoda AMTR_s00019p00150410 R-ATR-1125259 AMTR_s00019p00150410 [cytosol] R-ATR-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119428 GDP-D-rhamnose biosynthesis none Amborella trichopoda AMTR_s00019p00150410 R-ATR-1125259 AMTR_s00019p00150410 [cytosol] R-ATR-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Amborella trichopoda AMTR_s00019p00197750 R-ATR-1123477 AMTR_s00019p00197750 [cytosol] R-ATR-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119451 Xylose degradation none Amborella trichopoda AMTR_s00019p00205460 R-ATR-1122463 AMTR_s00019p00205460 [cytosol] R-ATR-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119321 Glycerol degradation I none Amborella trichopoda AMTR_s00019p00206230 R-ATR-1124048 AMTR_s00019p00206230 [cytosol] R-ATR-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119610 Biotin biosynthesis II none Amborella trichopoda AMTR_s00019p00213640 R-ATR-1125406 AMTR_s00019p00213640 [cytosol] R-ATR-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119418 Suberin biosynthesis none Amborella trichopoda AMTR_s00019p00226190 R-ATR-9920292 AMTR_s00019p00226190 [nucleoplasm] R-ATR-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8934108 Short day regulated expression of florigens none Amborella trichopoda AMTR_s00019p00241340 R-ATR-9639211 AMTR_s00019p00241340 [plant-type vacuole membrane] R-ATR-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9639136 Response to Aluminum stress none Amborella trichopoda AMTR_s00019p00246190 R-ATR-1124613 AMTR_s00019p00246190 [plasma membrane] R-ATR-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119314 Cellulose biosynthesis none Amborella trichopoda AMTR_s00019p00250330 R-ATR-8858085 AMTR_s00019p00250330 [plasma membrane] R-ATR-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8858053 Polar auxin transport none Amborella trichopoda AMTR_s00019p00250330 R-ATR-8858085 AMTR_s00019p00250330 [plasma membrane] R-ATR-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9924494 Gravity sensing and statolith sedimentation none Amborella trichopoda AMTR_s00019p00250330 R-ATR-9928298 PIN2 [endosome] R-ATR-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9924494 Gravity sensing and statolith sedimentation none Amborella trichopoda AMTR_s00019p00256940 R-ATR-9645872-2 AMTR_s00019p00256940 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00020p00173350 R-ATR-9681905 AMTR_s00020p00173350 [Golgi membrane] R-ATR-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119574 UDP-L-arabinose biosynthesis and transport none Amborella trichopoda AMTR_s00021p00041390 R-ATR-5654840 AMTR_s00021p00041390 [nucleoplasm] R-ATR-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5654828 Strigolactone signaling none Amborella trichopoda AMTR_s00021p00041390 R-ATR-5654840 AMTR_s00021p00041390 [nucleoplasm] R-ATR-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Amborella trichopoda AMTR_s00021p00084240 R-ATR-1130036 AMTR_s00021p00084240 [endoplasmic reticulum membrane] R-ATR-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119402 Phospholipid biosynthesis I none Amborella trichopoda AMTR_s00021p00097710 R-ATR-1126157 AMTR_s00021p00097710 [cytosol] R-ATR-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119460 Isoleucine biosynthesis from threonine none Amborella trichopoda AMTR_s00021p00097710 R-ATR-1126157 AMTR_s00021p00097710 [cytosol] R-ATR-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119600 Valine biosynthesis none Amborella trichopoda AMTR_s00021p00133930 R-ATR-1128071 AMTR_s00021p00133930 [mitochondrial matrix] R-ATR-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119533 TCA cycle (plant) none Amborella trichopoda AMTR_s00021p00138650 R-ATR-1125804 AMTR_s00021p00138650 [cytosol] R-ATR-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119300 Glycolipid desaturation none Amborella trichopoda AMTR_s00021p00200760 R-ATR-5608184 AMTR_s00021p00200760 [nucleoplasm] R-ATR-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5608118 Auxin signalling none Amborella trichopoda AMTR_s00021p00200760 R-ATR-5608184 AMTR_s00021p00200760 [nucleoplasm] R-ATR-9675304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675304 Lateral root emergence none Amborella trichopoda AMTR_s00021p00214440 R-ATR-1123250 AMTR_s00021p00214440 [cytosol] R-ATR-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119265 Tetrahydrofolate biosynthesis I none Amborella trichopoda AMTR_s00021p00214440 R-ATR-1123250 AMTR_s00021p00214440 [cytosol] R-ATR-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119523 Tetrahydrofolate biosynthesis II none Amborella trichopoda AMTR_s00021p00224370 R-ATR-1128586 AMTR_s00021p00224370 [amyloplast] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00021p00226670 R-ATR-6787066 AMTR_s00021p00226670 [nucleoplasm] R-ATR-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6787011 Jasmonic acid signaling none Amborella trichopoda AMTR_s00021p00231680 R-ATR-1123596 AMTR_s00021p00231680 [plastid stroma] R-ATR-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119509 Histidine biosynthesis I none Amborella trichopoda AMTR_s00021p00249200 R-ATR-1129859 AMTR_s00021p00249200 [chloroplast stroma] R-ATR-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119443 Ammonia assimilation cycle none Amborella trichopoda AMTR_s00021p00249200 R-ATR-5606382 AMTR_s00021p00249200 [plastid stroma] R-ATR-1119535 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119535 Glutamate biosynthesis IV none Amborella trichopoda AMTR_s00022p00124760 R-ATR-8868866 AMTR_s00022p00124760 [endoplasmic reticulum membrane] R-ATR-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8868949 Intracellular auxin transport none Amborella trichopoda AMTR_s00022p00129900 R-ATR-1127820 AMTR_s00022p00129900 [plasma membrane] R-ATR-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119314 Cellulose biosynthesis none Amborella trichopoda AMTR_s00022p00133290 R-ATR-1124496 AMTR_s00022p00133290 [cytosol] R-ATR-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119615 Mevalonate pathway none Amborella trichopoda AMTR_s00022p00147990 R-ATR-1129926-2 AMTR_s00022p00147990 [cytosol] R-ATR-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Amborella trichopoda AMTR_s00022p00158890 R-ATR-1130152 AMTR_s00022p00158890 [cytosol] R-ATR-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119394 Pantothenate and coenzyme A biosynthesis III none Amborella trichopoda AMTR_s00022p00172860 R-ATR-1124598 AMTR_s00022p00172860 [cytosol] R-ATR-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119300 Glycolipid desaturation none Amborella trichopoda AMTR_s00022p00191250 R-ATR-1125277 AMTR_s00022p00191250 [cytosol] R-ATR-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119278 PRPP biosynthesis I none Amborella trichopoda AMTR_s00022p00205120 R-ATR-1125641 AMTR_s00022p00205120 [cytosol] R-ATR-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119332 Jasmonic acid biosynthesis none Amborella trichopoda AMTR_s00022p00205120 R-ATR-1125641 AMTR_s00022p00205120 [cytosol] R-ATR-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119618 13-LOX and 13-HPL pathway none Amborella trichopoda AMTR_s00022p00205270 R-ATR-1129769-2 AMTR_s00022p00205270 [cytosol] R-ATR-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119332 Jasmonic acid biosynthesis none Amborella trichopoda AMTR_s00022p00205270 R-ATR-1129769-2 AMTR_s00022p00205270 [cytosol] R-ATR-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119618 13-LOX and 13-HPL pathway none Amborella trichopoda AMTR_s00022p00208630 R-ATR-1129769 AMTR_s00022p00208630 [cytosol] R-ATR-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119332 Jasmonic acid biosynthesis none Amborella trichopoda AMTR_s00022p00208630 R-ATR-1129769 AMTR_s00022p00208630 [cytosol] R-ATR-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119618 13-LOX and 13-HPL pathway none Amborella trichopoda AMTR_s00022p00210390 R-ATR-1130152-2 AMTR_s00022p00210390 [cytosol] R-ATR-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119394 Pantothenate and coenzyme A biosynthesis III none Amborella trichopoda AMTR_s00022p00216890 R-ATR-6786917 AMTR_s00022p00216890 [cytosol] R-ATR-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6787011 Jasmonic acid signaling none Amborella trichopoda AMTR_s00022p00228120 R-ATR-2960790 AMTR_s00022p00228120 [cytosol] R-ATR-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119386 UDP-N-acetylgalactosamine biosynthesis none Amborella trichopoda AMTR_s00022p00228120 R-ATR-2960790 AMTR_s00022p00228120 [cytosol] R-ATR-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9030654 Primary root development none Amborella trichopoda AMTR_s00022p00247220 R-ATR-1129600 AMTR_s00022p00247220 [cytosol] R-ATR-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119407 Ureide biosynthesis none Amborella trichopoda AMTR_s00022p00249100 R-ATR-9640675 AMTR_s00022p00249100 [nucleoplasm] R-ATR-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640882 Assembly of pre-replication complex none Amborella trichopoda AMTR_s00022p00249100 R-ATR-9640675 AMTR_s00022p00249100 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00022p00252850 R-ATR-9639088 AMTR_s00022p00252850 [plasma membrane] R-ATR-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9639136 Response to Aluminum stress none Amborella trichopoda AMTR_s00022p00253450 R-ATR-9609343-2 AMTR_s00022p00253450 [cytosol] R-ATR-9609352 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9609352 Lycopene catabolism none Amborella trichopoda AMTR_s00022p00253640 R-ATR-9609343 AMTR_s00022p00253640 [cytosol] R-ATR-9609352 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9609352 Lycopene catabolism none Amborella trichopoda AMTR_s00023p00030650 R-ATR-6788042 AMTR_s00023p00030650 [nucleoplasm] R-ATR-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6788019 Salicylic acid signaling none Amborella trichopoda AMTR_s00023p00102530 R-ATR-6786908 AMTR_s00023p00102530 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00023p00102530 R-ATR-9826697 AMTR_s00023p00102530 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00023p00173690 R-ATR-9639217 AMTR_s00023p00173690 [plasma membrane] R-ATR-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9639136 Response to Aluminum stress none Amborella trichopoda AMTR_s00023p00181580 R-ATR-9639874 AMTR_s00023p00181580 [plasma membrane] R-ATR-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9639861 Development of root hair none Amborella trichopoda AMTR_s00023p00206380 R-ATR-1130032 AMTR_s00023p00206380 [mitochondrial inner membrane] R-ATR-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119260 Cardiolipin biosynthesis none Amborella trichopoda AMTR_s00023p00249630 R-ATR-1127140 AMTR_s00023p00249630 [cytosol] R-ATR-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119403 Removal of superoxide radicals none Amborella trichopoda AMTR_s00023p00249950 R-ATR-9675423 AMTR_s00023p00249950 [nucleoplasm] R-ATR-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675508 Root elongation none Amborella trichopoda AMTR_s00023p00249950 R-ATR-9930290 MPK5 [nucleoplasm] R-ATR-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9766881 TF network involved in salinity response none Amborella trichopoda AMTR_s00024p00026220 R-ATR-1128637-2 AMTR_s00024p00026220 [chloroplast] R-ATR-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119494 Tryptophan biosynthesis none Amborella trichopoda AMTR_s00024p00098860 R-ATR-5679470 AMTR_s00024p00098860 [nucleoplasm] R-ATR-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5679411 Gibberellin signaling none Amborella trichopoda AMTR_s00024p00110840 R-ATR-9025809-3 AMTR_s00024p00110840 [cytosol] R-ATR-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9025754 Mugineic acid biosynthesis none Amborella trichopoda AMTR_s00024p00111030 R-ATR-9025809-2 AMTR_s00024p00111030 [cytosol] R-ATR-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9025754 Mugineic acid biosynthesis none Amborella trichopoda AMTR_s00024p00112640 R-ATR-9025809-4 AMTR_s00024p00112640 [cytosol] R-ATR-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9025754 Mugineic acid biosynthesis none Amborella trichopoda AMTR_s00024p00131820 R-ATR-1122936-2 AMTR_s00024p00131820 [cytosol] R-ATR-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119452 Galactose degradation II none Amborella trichopoda AMTR_s00024p00132940 R-ATR-1122936 AMTR_s00024p00132940 [cytosol] R-ATR-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119452 Galactose degradation II none Amborella trichopoda AMTR_s00024p00139650 R-ATR-1124291 AMTR_s00024p00139650 [cytosol] R-ATR-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Amborella trichopoda AMTR_s00024p00139650 R-ATR-1124291 AMTR_s00024p00139650 [cytosol] R-ATR-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119438 Secologanin and strictosidine biosynthesis none Amborella trichopoda AMTR_s00024p00139650 R-ATR-1124291 AMTR_s00024p00139650 [cytosol] R-ATR-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119486 IAA biosynthesis I none Amborella trichopoda AMTR_s00024p00142920 R-ATR-1123077 AMTR_s00024p00142920 [cytosol] R-ATR-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119458 Glutamate degradation none Amborella trichopoda AMTR_s00024p00145270 R-ATR-1127019 AMTR_s00024p00145270 [cytosol] R-ATR-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119458 Glutamate degradation none Amborella trichopoda AMTR_s00024p00151000 R-ATR-9645866 AMTR_s00024p00151000 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00024p00151000 R-ATR-9645866 AMTR_s00024p00151000 [nucleoplasm] R-ATR-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675824 DNA replication Initiation none Amborella trichopoda AMTR_s00024p00151670 R-ATR-1122843 AMTR_s00024p00151670 [cytosol] R-ATR-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119458 Glutamate degradation none Amborella trichopoda AMTR_s00024p00167880 R-ATR-1126542 AMTR_s00024p00167880 [cytosol] R-ATR-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119523 Tetrahydrofolate biosynthesis II none Amborella trichopoda AMTR_s00024p00167880 R-ATR-1126542 AMTR_s00024p00167880 [cytosol] R-ATR-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119617 Folate polyglutamylation I none Amborella trichopoda AMTR_s00024p00199370 R-ATR-9025809 AMTR_s00024p00199370 [cytosol] R-ATR-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9025754 Mugineic acid biosynthesis none Amborella trichopoda AMTR_s00024p00230050 R-ATR-1124291-2 AMTR_s00024p00230050 [cytosol] R-ATR-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Amborella trichopoda AMTR_s00024p00230050 R-ATR-1124291-2 AMTR_s00024p00230050 [cytosol] R-ATR-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119438 Secologanin and strictosidine biosynthesis none Amborella trichopoda AMTR_s00024p00230050 R-ATR-1124291-2 AMTR_s00024p00230050 [cytosol] R-ATR-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119486 IAA biosynthesis I none Amborella trichopoda AMTR_s00024p00230190 R-ATR-1130153 AMTR_s00024p00230190 [cytosol] R-ATR-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119332 Jasmonic acid biosynthesis none Amborella trichopoda AMTR_s00024p00230190 R-ATR-6787115 AMTR_s00024p00230190 [nucleoplasm] R-ATR-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6787011 Jasmonic acid signaling none Amborella trichopoda AMTR_s00024p00231980 R-ATR-1127318 AMTR_s00024p00231980 [cytosol] R-ATR-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Amborella trichopoda AMTR_s00024p00231980 R-ATR-1127318 AMTR_s00024p00231980 [cytosol] R-ATR-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119438 Secologanin and strictosidine biosynthesis none Amborella trichopoda AMTR_s00024p00231980 R-ATR-1127318 AMTR_s00024p00231980 [cytosol] R-ATR-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119486 IAA biosynthesis I none Amborella trichopoda AMTR_s00024p00245050 R-ATR-1123433 AMTR_s00024p00245050 [cytosol] R-ATR-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119332 Jasmonic acid biosynthesis none Amborella trichopoda AMTR_s00024p00245050 R-ATR-1123433 AMTR_s00024p00245050 [cytosol] R-ATR-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119618 13-LOX and 13-HPL pathway none Amborella trichopoda AMTR_s00024p00245650 R-ATR-1124813 AMTR_s00024p00245650 [mitochondrial matrix] R-ATR-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119337 Proline degradation none Amborella trichopoda AMTR_s00024p00245650 R-ATR-8986570 AMTR_s00024p00245650 [mitochondrial matrix] R-ATR-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119365 Lysine degradation II none Amborella trichopoda AMTR_s00024p00245650 R-ATR-9658682 AMTR_s00024p00245650 [cytosol] R-ATR-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119567 Beta-alanine biosynthesis I none Amborella trichopoda AMTR_s00024p00250140 R-ATR-1128126 AMTR_s00024p00250140 [endosome] R-ATR-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5608118 Auxin signalling none Amborella trichopoda AMTR_s00024p00250140 R-ATR-5679348 AMTR_s00024p00250140 [plasma membrane] R-ATR-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5608118 Auxin signalling none Amborella trichopoda AMTR_s00025p00041760 R-ATR-1122398 AMTR_s00025p00041760 [amyloplast] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00025p00047220 R-ATR-9025500 AMTR_s00025p00047220 [endoplasmic reticulum membrane] R-ATR-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119325 Sphingolipid metabolism none Amborella trichopoda AMTR_s00025p00053190 R-ATR-1127599 AMTR_s00025p00053190 [cytosol] R-ATR-1119388 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119388 IAA biosynthesis VI (via indole-3-acetamide) none Amborella trichopoda AMTR_s00025p00076740 R-ATR-1129055 AMTR_s00025p00076740 [mitochondrial matrix] R-ATR-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119533 TCA cycle (plant) none Amborella trichopoda AMTR_s00025p00099200 R-ATR-1128534 AMTR_s00025p00099200 [cytosol] R-ATR-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119437 Glutathione redox reactions I none Amborella trichopoda AMTR_s00025p00113840 R-ATR-9930255 MPK15 [nucleoplasm] R-ATR-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9766881 TF network involved in salinity response none Amborella trichopoda AMTR_s00025p00120730 R-ATR-1129629 AMTR_s00025p00120730 [plastid stroma] R-ATR-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119293 Glutamine biosynthesis I none Amborella trichopoda AMTR_s00025p00120730 R-ATR-1129629 AMTR_s00025p00120730 [plastid stroma] R-ATR-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119443 Ammonia assimilation cycle none Amborella trichopoda AMTR_s00025p00136470 R-ATR-1129924 AMTR_s00025p00136470 [cytosol] R-ATR-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119342 Gamma-glutamyl cycle none Amborella trichopoda AMTR_s00025p00136470 R-ATR-1129924 AMTR_s00025p00136470 [cytosol] R-ATR-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119483 Glutathione biosynthesis none Amborella trichopoda AMTR_s00025p00151540 R-ATR-1126034 AMTR_s00025p00151540 [cytosol] R-ATR-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119534 Pyridoxal 5'-phosphate salvage pathway none Amborella trichopoda AMTR_s00025p00151540 R-ATR-1126034 AMTR_s00025p00151540 [cytosol] R-ATR-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119594 Pyridoxal 5'-phosphate biosynthesis none Amborella trichopoda AMTR_s00025p00164700 R-ATR-1123867 AMTR_s00025p00164700 [cytosol] R-ATR-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119370 Sterol biosynthesis none Amborella trichopoda AMTR_s00025p00197440 R-ATR-1130281 AMTR_s00025p00197440 [cytosol] R-ATR-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119574 UDP-L-arabinose biosynthesis and transport none Amborella trichopoda AMTR_s00025p00209630 R-ATR-1129879 AMTR_s00025p00209630 [cytosol] R-ATR-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119436 Peptidoglycan biosynthesis I none Amborella trichopoda AMTR_s00025p00231520 R-ATR-5632143 AMTR_s00025p00231520 [nucleoplasm] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00025p00231520 R-ATR-5632143 AMTR_s00025p00231520 [nucleoplasm] R-ATR-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9924451 Shoot (tiller) formation and regulation of tiller angle none Amborella trichopoda AMTR_s00025p00235120 R-ATR-1128463 AMTR_s00025p00235120 [cytosol] R-ATR-1119550 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119550 Gentiodelphin biosynthesis none Amborella trichopoda AMTR_s00025p00238170 R-ATR-1129055-2 AMTR_s00025p00238170 [mitochondrial matrix] R-ATR-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119533 TCA cycle (plant) none Amborella trichopoda AMTR_s00026p00049360 R-ATR-9640704 AMTR_s00026p00049360 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00026p00049360 R-ATR-9640704 AMTR_s00026p00049360 [nucleoplasm] R-ATR-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675824 DNA replication Initiation none Amborella trichopoda AMTR_s00026p00065580 R-ATR-1123797 AMTR_s00026p00065580 [cytosol] R-ATR-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119281 Aspartate biosynthesis I none Amborella trichopoda AMTR_s00026p00065580 R-ATR-5632003 AMTR_s00026p00065580 [plastid stroma] R-ATR-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119553 Asparagine biosynthesis none Amborella trichopoda AMTR_s00026p00244220 R-ATR-9826652 OSH15 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00026p00244220 R-ATR-9631619 AMTR_s00026p00244220 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00027p00045420 R-ATR-9025699-2 AMTR_s00027p00045420 [plasma membrane] R-ATR-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8858053 Polar auxin transport none Amborella trichopoda AMTR_s00027p00045420 R-ATR-9025699-2 AMTR_s00027p00045420 [plasma membrane] R-ATR-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9025727 Iron uptake and transport in root vascular system none Amborella trichopoda AMTR_s00027p00202830 R-ATR-9640708 phospho-AMTR_s00027p00202830 [nucleoplasm] R-ATR-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640760 G1 phase none Amborella trichopoda AMTR_s00027p00202830 R-ATR-9640770 AMTR_s00027p00202830 [nucleoplasm] R-ATR-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640760 G1 phase none Amborella trichopoda AMTR_s00027p00202830 R-ATR-9640708 phospho-AMTR_s00027p00202830 [nucleoplasm] R-ATR-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640887 G1/S transition none Amborella trichopoda AMTR_s00028p00071100 R-ATR-1127723 AMTR_s00028p00071100 [cytosol] R-ATR-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119331 Cysteine biosynthesis I none Amborella trichopoda AMTR_s00028p00239040 R-ATR-9611549 phospho-phosphorylated-CERK1 [plasma membrane] R-ATR-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9611432 Recognition of fungal and bacterial pathogens and immunity response none Amborella trichopoda AMTR_s00029p00040760 R-ATR-8933787 AMTR_s00029p00040760 [nucleoplasm] R-ATR-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8933811 Circadian rhythm none Amborella trichopoda AMTR_s00029p00055000 R-ATR-1125237 AMTR_s00029p00055000 [mitochondrial matrix] R-ATR-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119533 TCA cycle (plant) none Amborella trichopoda AMTR_s00029p00058110 R-ATR-9826597-2 AMTR_s00029p00058110 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00029p00110150 R-ATR-1125989 AMTR_s00029p00110150 [cytosol] R-ATR-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119438 Secologanin and strictosidine biosynthesis none Amborella trichopoda AMTR_s00029p00129160 R-ATR-9828974 CKX3 [endoplasmic reticulum lumen] R-ATR-9828944 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9828944 Regulation of lemma joint development and leaf angle by cytokinin none Amborella trichopoda AMTR_s00029p00157690 R-ATR-5608154 AMTR_s00029p00157690 [nucleoplasm] R-ATR-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5608118 Auxin signalling none Amborella trichopoda AMTR_s00029p00187590 R-ATR-1127082 AMTR_s00029p00187590 [plastid stroma] R-ATR-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119519 Calvin cycle none Amborella trichopoda AMTR_s00029p00190180 R-ATR-2960790-2 AMTR_s00029p00190180 [cytosol] R-ATR-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119386 UDP-N-acetylgalactosamine biosynthesis none Amborella trichopoda AMTR_s00029p00190180 R-ATR-2960790-2 AMTR_s00029p00190180 [cytosol] R-ATR-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9030654 Primary root development none Amborella trichopoda AMTR_s00029p00198200 R-ATR-9640689 AMTR_s00029p00198200 [nucleoplasm] R-ATR-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675782 Maturation none Amborella trichopoda AMTR_s00029p00198200 R-ATR-9640689 AMTR_s00029p00198200 [nucleoplasm] R-ATR-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675815 Leading strand synthesis none Amborella trichopoda AMTR_s00029p00198200 R-ATR-9640689 AMTR_s00029p00198200 [nucleoplasm] R-ATR-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675885 Lagging strand synthesis none Amborella trichopoda AMTR_s00029p00205400 R-ATR-1124269 AMTR_s00029p00205400 [cytosol] R-ATR-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119456 Brassinosteroid biosynthesis II none Amborella trichopoda AMTR_s00029p00208280 R-ATR-8986695 AMTR_s00029p00208280 [endoplasmic reticulum membrane] R-ATR-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8986768 Anther and pollen development none Amborella trichopoda AMTR_s00029p00217840 R-ATR-6787181 AMTR_s00029p00217840 [cytosol] R-ATR-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6787011 Jasmonic acid signaling none Amborella trichopoda AMTR_s00029p00230900 R-ATR-9640886 AMTR_s00029p00230900 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00029p00234880 R-ATR-1123998 AMTR_s00029p00234880 [chloroplast] R-ATR-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119494 Tryptophan biosynthesis none Amborella trichopoda AMTR_s00029p00247460 R-ATR-1126602 AMTR_s00029p00247460 [cytosol] R-ATR-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119273 Lysine biosynthesis I none Amborella trichopoda AMTR_s00029p00247460 R-ATR-1126602 AMTR_s00029p00247460 [cytosol] R-ATR-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119283 Lysine biosynthesis II none Amborella trichopoda AMTR_s00029p00247460 R-ATR-5606494 AMTR_s00029p00247460 [plastid stroma] R-ATR-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119419 Lysine biosynthesis VI none Amborella trichopoda AMTR_s00030p00012550 R-ATR-8854121 AMTR_s00030p00012550 [cytosol] R-ATR-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119556 Choline biosynthesis I none Amborella trichopoda AMTR_s00030p00092010 R-ATR-1128906 AMTR_s00030p00092010 [cytosol] R-ATR-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119444 Canavanine biosynthesis none Amborella trichopoda AMTR_s00030p00202080 R-ATR-1124453 AMTR_s00030p00202080 [peroxisomal matrix] R-ATR-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119407 Ureide biosynthesis none Amborella trichopoda AMTR_s00030p00231260 R-ATR-9640739 AMTR_s00030p00231260 [nucleoplasm] R-ATR-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640887 G1/S transition none Amborella trichopoda AMTR_s00030p00243810 R-ATR-1129169-2 AMTR_s00030p00243810 [plastid stroma] R-ATR-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119308 Momilactone biosynthesis none Amborella trichopoda AMTR_s00030p00244080 R-ATR-1129169-4 AMTR_s00030p00244080 [plastid stroma] R-ATR-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119308 Momilactone biosynthesis none Amborella trichopoda AMTR_s00030p00244330 R-ATR-1129169 AMTR_s00030p00244330 [plastid stroma] R-ATR-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119308 Momilactone biosynthesis none Amborella trichopoda AMTR_s00030p00244570 R-ATR-1129169-3 AMTR_s00030p00244570 [plastid stroma] R-ATR-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119308 Momilactone biosynthesis none Amborella trichopoda AMTR_s00030p00245780 R-ATR-1127161-3 AMTR_s00030p00245780 [cytosol] R-ATR-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119486 IAA biosynthesis I none Amborella trichopoda AMTR_s00030p00246840 R-ATR-1127161 AMTR_s00030p00246840 [cytosol] R-ATR-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119486 IAA biosynthesis I none Amborella trichopoda AMTR_s00031p00017860 R-ATR-6787863 AMTR_s00031p00017860 [nucleoplasm] R-ATR-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6788019 Salicylic acid signaling none Amborella trichopoda AMTR_s00031p00113450 R-ATR-1125374 AMTR_s00031p00113450 [cytosol] R-ATR-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119586 Cyanate degradation none Amborella trichopoda AMTR_s00031p00205960 R-ATR-5632232 phospho-AMTR_s00031p00205960 [plasma membrane] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00032p00026180 R-ATR-1128626 AMTR_s00032p00026180 [cytosol] R-ATR-1119581 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119581 Thiosulfate disproportionation III (rhodanese) none Amborella trichopoda AMTR_s00032p00026180 R-ATR-1128626 AMTR_s00032p00026180 [cytosol] R-ATR-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119612 Cysteine degradation none Amborella trichopoda AMTR_s00032p00028650 R-ATR-1127705-2 AMTR_s00032p00028650 [plastid stroma] R-ATR-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119519 Calvin cycle none Amborella trichopoda AMTR_s00032p00050810 R-ATR-9025508 AMTR_s00032p00050810 [endoplasmic reticulum membrane] R-ATR-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119325 Sphingolipid metabolism none Amborella trichopoda AMTR_s00032p00091590 R-ATR-4827041 AMTR_s00032p00091590 [plastid stroma] R-ATR-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-4827054 Tetrapyrrole biosynthesis I none Amborella trichopoda AMTR_s00032p00112510 R-ATR-6788026 AMTR_s00032p00112510 [cytosol] R-ATR-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6788019 Salicylic acid signaling none Amborella trichopoda AMTR_s00032p00115610 R-ATR-9626337-2 AMTR_s00032p00115610 [Golgi-associated vesicle] R-ATR-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9626305 Regulatory network of nutrient accumulation none Amborella trichopoda AMTR_s00032p00120910 R-ATR-5679402 AMTR_s00032p00120910 [nucleoplasm] R-ATR-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5679411 Gibberellin signaling none Amborella trichopoda AMTR_s00032p00156310 R-ATR-1128974 AMTR_s00032p00156310 [cytosol] R-ATR-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119287 Vitamin E biosynthesis none Amborella trichopoda AMTR_s00032p00156310 R-ATR-1128974 AMTR_s00032p00156310 [cytosol] R-ATR-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119506 tyrosine degradation I none Amborella trichopoda AMTR_s00032p00157410 R-ATR-5138505 AMTR_s00032p00157410 [plastid stroma] R-ATR-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119263 Arginine biosynthesis none Amborella trichopoda AMTR_s00032p00157410 R-ATR-5138505 AMTR_s00032p00157410 [plastid stroma] R-ATR-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119539 Ornithine biosynthesis none Amborella trichopoda AMTR_s00032p00157410 R-ATR-5138505 AMTR_s00032p00157410 [plastid stroma] R-ATR-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119622 Arginine biosynthesis II (acetyl cycle) none Amborella trichopoda AMTR_s00032p00201850 R-ATR-8853988 Phosphatidylglycerophosphatase [mitochondrial matrix] R-ATR-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119260 Cardiolipin biosynthesis none Amborella trichopoda AMTR_s00032p00204040 R-ATR-8987505 AMTR_s00032p00204040 [mitochondrial matrix] R-ATR-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119312 Photorespiration none Amborella trichopoda AMTR_s00032p00211090 R-ATR-9826677-2 AMTR_s00032p00211090 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00032p00213840 R-ATR-1124949 AMTR_s00032p00213840 [plastid stroma] R-ATR-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119308 Momilactone biosynthesis none Amborella trichopoda AMTR_s00032p00213840 R-ATR-1124949 AMTR_s00032p00213840 [plastid stroma] R-ATR-1119328 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119328 Oleoresin sesquiterpene volatiles biosynthesis none Amborella trichopoda AMTR_s00032p00213840 R-ATR-1129421 AMTR_s00032p00213840 [chloroplast] R-ATR-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119348 Ent-kaurene biosynthesis none Amborella trichopoda AMTR_s00032p00213840 R-ATR-1124949 AMTR_s00032p00213840 [plastid stroma] R-ATR-1119371 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119371 Oryzalexin A-F biosynthesis none Amborella trichopoda AMTR_s00032p00213840 R-ATR-1124949 AMTR_s00032p00213840 [plastid stroma] R-ATR-1119521 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119521 Oryzalexin S biosynthesis none Amborella trichopoda AMTR_s00032p00213840 R-ATR-1129220 AMTR_s00032p00213840 [cytosol] R-ATR-1119583 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119583 Phytocassane biosynthesis none Amborella trichopoda AMTR_s00032p00213840 R-ATR-9610718 AMTR_s00032p00213840 [plastid stroma] R-ATR-9610720 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9610720 Oryzalide A biosynthesis none Amborella trichopoda AMTR_s00032p00232130 R-ATR-1125504 AMTR_s00032p00232130 [cytosol] R-ATR-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119273 Lysine biosynthesis I none Amborella trichopoda AMTR_s00032p00232130 R-ATR-1125504 AMTR_s00032p00232130 [cytosol] R-ATR-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119283 Lysine biosynthesis II none Amborella trichopoda AMTR_s00032p00232130 R-ATR-1125504 AMTR_s00032p00232130 [cytosol] R-ATR-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119295 Homoserine biosynthesis none Amborella trichopoda AMTR_s00032p00232130 R-ATR-5606489 AMTR_s00032p00232130 [plastid stroma] R-ATR-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119419 Lysine biosynthesis VI none Amborella trichopoda AMTR_s00032p00233360 R-ATR-9826677 AMTR_s00032p00233360 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00032p00242890 R-ATR-1125920 AMTR_s00032p00242890 [cytosol] R-ATR-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119273 Lysine biosynthesis I none Amborella trichopoda AMTR_s00032p00242890 R-ATR-1125920 AMTR_s00032p00242890 [cytosol] R-ATR-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119283 Lysine biosynthesis II none Amborella trichopoda AMTR_s00033p00038120 R-ATR-5654942 AMTR_s00033p00038120 [Golgi lumen] R-ATR-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5654909 Xylan biosynthesis none Amborella trichopoda AMTR_s00033p00064250 R-ATR-9682527 AMTR_s00033p00064250 [cytosol] R-ATR-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119410 Ascorbate biosynthesis none Amborella trichopoda AMTR_s00033p00197360 R-ATR-1126860 AMTR_s00033p00197360 [cytosol] R-ATR-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119321 Glycerol degradation I none Amborella trichopoda AMTR_s00033p00197520 R-ATR-1129485 AMTR_s00033p00197520 [cytosol] R-ATR-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119341 Galactosylcyclitol biosynthesis none Amborella trichopoda AMTR_s00033p00199740 R-ATR-1128812 AMTR_s00033p00199740 [cytosol] R-ATR-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119393 Asparagine degradation I none Amborella trichopoda AMTR_s00033p00204130 R-ATR-1127574 AMTR_s00033p00204130 [cytosol] R-ATR-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119465 Sucrose biosynthesis none Amborella trichopoda AMTR_s00033p00213930 R-ATR-1126269 AMTR_s00033p00213930 [mitochondrial matrix] R-ATR-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119479 Valine degradation none Amborella trichopoda AMTR_s00033p00231560 R-ATR-3230566 AMTR_s00033p00231560 [plastid stroma] R-ATR-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119519 Calvin cycle none Amborella trichopoda AMTR_s00033p00236370 R-ATR-1123575 AMTR_s00033p00236370 [cytosol] R-ATR-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119297 Beta-alanine biosynthesis III none Amborella trichopoda AMTR_s00033p00242600 R-ATR-4415007 AMTR_s00033p00242600 [cytosol] R-ATR-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-3899351 Abscisic acid (ABA) mediated signaling none Amborella trichopoda AMTR_s00033p00242600 R-ATR-4415016 phospho-AMTR_s00033p00242600 [cytosol] R-ATR-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-3899351 Abscisic acid (ABA) mediated signaling none Amborella trichopoda AMTR_s00033p00242600 R-ATR-4415007 AMTR_s00033p00242600 [cytosol] R-ATR-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9639861 Development of root hair none Amborella trichopoda AMTR_s00034p00169430 R-ATR-1124274 AMTR_s00034p00169430 [cytosol] R-ATR-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119513 Pinobanksin biosynthesis none Amborella trichopoda AMTR_s00034p00169430 R-ATR-1124274 AMTR_s00034p00169430 [cytosol] R-ATR-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119531 Flavonoid biosynthesis none Amborella trichopoda AMTR_s00034p00169920 R-ATR-1124274-2 AMTR_s00034p00169920 [cytosol] R-ATR-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119513 Pinobanksin biosynthesis none Amborella trichopoda AMTR_s00034p00169920 R-ATR-1124274-2 AMTR_s00034p00169920 [cytosol] R-ATR-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119531 Flavonoid biosynthesis none Amborella trichopoda AMTR_s00034p00233920 R-ATR-1124274-3 AMTR_s00034p00233920 [cytosol] R-ATR-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119513 Pinobanksin biosynthesis none Amborella trichopoda AMTR_s00034p00233920 R-ATR-1124274-3 AMTR_s00034p00233920 [cytosol] R-ATR-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119531 Flavonoid biosynthesis none Amborella trichopoda AMTR_s00036p00077430 R-ATR-5679436 AMTR_s00036p00077430 [nucleoplasm] R-ATR-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5679411 Gibberellin signaling none Amborella trichopoda AMTR_s00036p00114630 R-ATR-6788127 AMTR_s00036p00114630 [nucleoplasm] R-ATR-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6788019 Salicylic acid signaling none Amborella trichopoda AMTR_s00036p00114630 R-ATR-6788179 AMTR_s00036p00114630 [cytosol] R-ATR-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6788019 Salicylic acid signaling none Amborella trichopoda AMTR_s00036p00136810 R-ATR-5367743 AMTR_s00036p00136810 [cytosol] R-ATR-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5367729 Strigolactone biosynthesis none Amborella trichopoda AMTR_s00036p00138480 R-ATR-1126892 AMTR_s00036p00138480 [cytosol] R-ATR-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119353 Linear furanocoumarin biosynthesis none Amborella trichopoda AMTR_s00036p00189900 R-ATR-2685730 AMTR_s00036p00189900 [cytosol] R-ATR-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119580 IAA biosynthesis II none Amborella trichopoda AMTR_s00036p00235090 R-ATR-1127015 AMTR_s00036p00235090 [cytosol] R-ATR-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119334 Ethylene biosynthesis from methionine none Amborella trichopoda AMTR_s00036p00235090 R-ATR-1127015 AMTR_s00036p00235090 [cytosol] R-ATR-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119624 Methionine salvage pathway none Amborella trichopoda AMTR_s00036p00236520 R-ATR-5632264 AMTR_s00036p00236520 [nucleoplasm] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00037p00164200 R-ATR-1127243 AMTR_s00037p00164200 [amyloplast] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00037p00164200 R-ATR-9918268 soluble Starch Synthase (SSIIIA/SSIII-2) [amyloplast] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00037p00169980 R-ATR-9826597 AMTR_s00037p00169980 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00037p00201510 R-ATR-1129219 AMTR_s00037p00201510 [cytosol] R-ATR-1119323 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119323 Lipid-A-precursor biosynthesis none Amborella trichopoda AMTR_s00037p00234060 R-ATR-8987488 AMTR_s00037p00234060 [mitochondrial matrix] R-ATR-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119312 Photorespiration none Amborella trichopoda AMTR_s00038p00055100 R-ATR-5632316 AMTR_s00038p00055100 [cytosol] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00038p00074050 R-ATR-8858063-2 AMTR_s00038p00074050 [plasma membrane] R-ATR-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8858053 Polar auxin transport none Amborella trichopoda AMTR_s00038p00079560 R-ATR-8858063 AMTR_s00038p00079560 [plasma membrane] R-ATR-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8858053 Polar auxin transport none Amborella trichopoda AMTR_s00038p00082540 R-ATR-8858063-3 AMTR_s00038p00082540 [plasma membrane] R-ATR-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8858053 Polar auxin transport none Amborella trichopoda AMTR_s00038p00142520 R-ATR-4723690 AMTR_s00038p00142520 [plastid stroma] R-ATR-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119464 Methylerythritol phosphate pathway none Amborella trichopoda AMTR_s00038p00150140 R-ATR-9608678 AMTR_s00038p00150140 [cytosol] R-ATR-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9608575 Reproductive meristem phase change none Amborella trichopoda AMTR_s00038p00150140 R-ATR-8986843 AMTR_s00038p00150140 [nucleoplasm] R-ATR-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9608575 Reproductive meristem phase change none Amborella trichopoda AMTR_s00038p00182380 R-ATR-8933710 AMTR_s00038p00182380 [nucleoplasm] R-ATR-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8933811 Circadian rhythm none Amborella trichopoda AMTR_s00038p00205390 R-ATR-1129311 AMTR_s00038p00205390 [cytosol] R-ATR-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Amborella trichopoda AMTR_s00039p00032460 R-ATR-5632110 AMTR_s00039p00032460 [nucleoplasm] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00039p00032460 R-ATR-5632110 AMTR_s00039p00032460 [nucleoplasm] R-ATR-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5679411 Gibberellin signaling none Amborella trichopoda AMTR_s00039p00081330 R-ATR-1127733 AMTR_s00039p00081330 [cytosol] R-ATR-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119460 Isoleucine biosynthesis from threonine none Amborella trichopoda AMTR_s00039p00081330 R-ATR-1127733 AMTR_s00039p00081330 [cytosol] R-ATR-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119600 Valine biosynthesis none Amborella trichopoda AMTR_s00039p00083280 R-ATR-1124939 AMTR_s00039p00083280 [cytosol] R-ATR-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119540 Leucine biosynthesis none Amborella trichopoda AMTR_s00039p00086570 R-ATR-1124939-2 AMTR_s00039p00086570 [cytosol] R-ATR-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119540 Leucine biosynthesis none Amborella trichopoda AMTR_s00039p00107450 R-ATR-5655057 AMTR_s00039p00107450 [Golgi lumen] R-ATR-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5655101 Xyloglucan biosynthesis none Amborella trichopoda AMTR_s00039p00150510 R-ATR-9675439 AMTR_s00039p00150510 [mitochondrial matrix] R-ATR-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9030654 Primary root development none Amborella trichopoda AMTR_s00039p00168230 R-ATR-1129569 AMTR_s00039p00168230 [cytosol] R-ATR-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119379 Flavin biosynthesis none Amborella trichopoda AMTR_s00039p00176550 R-ATR-1122881 AMTR_s00039p00176550 [cytosol] R-ATR-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Amborella trichopoda AMTR_s00039p00176550 R-ATR-1122881 AMTR_s00039p00176550 [cytosol] R-ATR-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119438 Secologanin and strictosidine biosynthesis none Amborella trichopoda AMTR_s00039p00176550 R-ATR-1122881 AMTR_s00039p00176550 [cytosol] R-ATR-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119486 IAA biosynthesis I none Amborella trichopoda AMTR_s00039p00196100 R-ATR-1128385 AMTR_s00039p00196100 [nucleoplasm] R-ATR-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5608118 Auxin signalling none Amborella trichopoda AMTR_s00039p00217390 R-ATR-1125920-2 AMTR_s00039p00217390 [cytosol] R-ATR-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119273 Lysine biosynthesis I none Amborella trichopoda AMTR_s00039p00217390 R-ATR-1125920-2 AMTR_s00039p00217390 [cytosol] R-ATR-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119283 Lysine biosynthesis II none Amborella trichopoda AMTR_s00039p00223010 R-ATR-5633270 AMTR_s00039p00223010 [cytosol] R-ATR-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119495 Citrulline biosynthesis none Amborella trichopoda AMTR_s00040p00057740 R-ATR-9928771 AMTR_s00040p00057740 [nucleoplasm] R-ATR-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9928831 Severe drought none Amborella trichopoda AMTR_s00040p00090100 R-ATR-1127065 AMTR_s00040p00090100 [cytosol] R-ATR-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119304 Putrescine biosynthesis II none Amborella trichopoda AMTR_s00040p00098630 R-ATR-1126996 AMTR_s00040p00098630 [cytosol] R-ATR-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119316 Phenylpropanoid biosynthesis none Amborella trichopoda AMTR_s00040p00175760 R-ATR-9645938 AMTR_s00040p00175760 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00040p00175760 R-ATR-9645938 AMTR_s00040p00175760 [nucleoplasm] R-ATR-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675824 DNA replication Initiation none Amborella trichopoda AMTR_s00040p00177210 R-ATR-9645828 AMTR_s00040p00177210 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00040p00177210 R-ATR-9645828 AMTR_s00040p00177210 [nucleoplasm] R-ATR-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675824 DNA replication Initiation none Amborella trichopoda AMTR_s00040p00188540 R-ATR-1124067 AMTR_s00040p00188540 [amyloplast] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00040p00188540 R-ATR-9626520 AMTR_s00040p00188540 [plastid stroma] R-ATR-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9626305 Regulatory network of nutrient accumulation none Amborella trichopoda AMTR_s00040p00191090 R-ATR-9626474 AMTR_s00040p00191090 [trans-Golgi network membrane] R-ATR-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9626305 Regulatory network of nutrient accumulation none Amborella trichopoda AMTR_s00040p00201950 R-ATR-5149646 AMTR_s00040p00201950 [plastid stroma] R-ATR-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119519 Calvin cycle none Amborella trichopoda AMTR_s00040p00201950 R-ATR-1126652 AMTR_s00040p00201950 [cytosol] R-ATR-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119570 Cytosolic glycolysis none Amborella trichopoda AMTR_s00040p00206830 R-ATR-1130141 AMTR_s00040p00206830 [mitochondrial matrix] R-ATR-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119533 TCA cycle (plant) none Amborella trichopoda AMTR_s00040p00206830 R-ATR-1130141 AMTR_s00040p00206830 [mitochondrial matrix] R-ATR-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119540 Leucine biosynthesis none Amborella trichopoda AMTR_s00040p00213340 R-ATR-1127922 AMTR_s00040p00213340 [cytosol] R-ATR-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119370 Sterol biosynthesis none Amborella trichopoda AMTR_s00040p00234580 R-ATR-1124560 AMTR_s00040p00234580 [cytosol] R-ATR-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119563 UDP-D-xylose biosynthesis none Amborella trichopoda AMTR_s00040p00234580 R-ATR-9681903 AMTR_s00040p00234580 [Golgi lumen] R-ATR-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119574 UDP-L-arabinose biosynthesis and transport none Amborella trichopoda AMTR_s00040p00234580 R-ATR-1124560 AMTR_s00040p00234580 [cytosol] R-ATR-5654894 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5654894 UDP-D-apiose biosynthesis none Amborella trichopoda AMTR_s00041p00062460 R-ATR-8879061 LOS2 homolog [nucleoplasm] R-ATR-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8879007 Response to cold temperature none Amborella trichopoda AMTR_s00041p00062460 R-ATR-8878987 AMTR_s00041p00062460 [nucleoplasm] R-ATR-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8879007 Response to cold temperature none Amborella trichopoda AMTR_s00041p00069440 R-ATR-1125974 AMTR_s00041p00069440 [cytosol] R-ATR-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119262 Threonine biosynthesis from homoserine none Amborella trichopoda AMTR_s00041p00069440 R-ATR-1125974 AMTR_s00041p00069440 [cytosol] R-ATR-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119400 Methionine biosynthesis II none Amborella trichopoda AMTR_s00041p00073060 R-ATR-1128989 AMTR_s00041p00073060 [plastid stroma] R-ATR-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119509 Histidine biosynthesis I none Amborella trichopoda AMTR_s00041p00092480 R-ATR-1123404 AMTR_s00041p00092480 [peroxisomal matrix] R-ATR-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119407 Ureide biosynthesis none Amborella trichopoda AMTR_s00041p00221250 R-ATR-2672431 AMTR_s00041p00221250 [cytosol] R-ATR-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119322 Leucodelphinidin biosynthesis none Amborella trichopoda AMTR_s00041p00221250 R-ATR-2672431 AMTR_s00041p00221250 [cytosol] R-ATR-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Amborella trichopoda AMTR_s00041p00221250 R-ATR-1124195 AMTR_s00041p00221250 [cytosol] R-ATR-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119531 Flavonoid biosynthesis none Amborella trichopoda AMTR_s00041p00225610 R-ATR-1128877 AMTR_s00041p00225610 [plastid stroma] R-ATR-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119424 Plastid glycolysis none Amborella trichopoda AMTR_s00041p00225610 R-ATR-1128877 AMTR_s00041p00225610 [plastid stroma] R-ATR-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119519 Calvin cycle none Amborella trichopoda AMTR_s00043p00089500 R-ATR-9924543 CYP714D1/EUI1 [endoplasmic reticulum membrane] R-ATR-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Amborella trichopoda AMTR_s00044p00012740 R-ATR-9626337 AMTR_s00044p00012740 [Golgi-associated vesicle] R-ATR-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9626305 Regulatory network of nutrient accumulation none Amborella trichopoda AMTR_s00044p00032580 R-ATR-1129355 AMTR_s00044p00032580 [plastid] R-ATR-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119403 Removal of superoxide radicals none Amborella trichopoda AMTR_s00044p00039430 R-ATR-1124861 AMTR_s00044p00039430 [plastid stroma] R-ATR-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119449 Carotenoid biosynthesis none Amborella trichopoda AMTR_s00044p00070480 R-ATR-1126554 AMTR_s00044p00070480 [cytosol] R-ATR-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119452 Galactose degradation II none Amborella trichopoda AMTR_s00044p00084770 R-ATR-1123525 AMTR_s00044p00084770 [cytosol] R-ATR-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119384 NAD biosynthesis I (from aspartate) none Amborella trichopoda AMTR_s00044p00103310 R-ATR-9675876 AMTR_s00044p00103310 [nucleoplasm] R-ATR-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675782 Maturation none Amborella trichopoda AMTR_s00044p00103310 R-ATR-9675876 AMTR_s00044p00103310 [nucleoplasm] R-ATR-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675815 Leading strand synthesis none Amborella trichopoda AMTR_s00044p00103310 R-ATR-9675876 AMTR_s00044p00103310 [nucleoplasm] R-ATR-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675885 Lagging strand synthesis none Amborella trichopoda AMTR_s00044p00104590 R-ATR-5221147 AMTR_s00044p00104590 [cytosol] R-ATR-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-3899351 Abscisic acid (ABA) mediated signaling none Amborella trichopoda AMTR_s00044p00126910 R-ATR-8868994 AMTR_s00044p00126910 [endoplasmic reticulum membrane] R-ATR-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8868949 Intracellular auxin transport none Amborella trichopoda AMTR_s00044p00131190 R-ATR-1126728 AMTR_s00044p00131190 [plastid stroma] R-ATR-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119424 Plastid glycolysis none Amborella trichopoda AMTR_s00044p00154340 R-ATR-5654750-2 AMTR_s00044p00154340 [cytosol] R-ATR-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119393 Asparagine degradation I none Amborella trichopoda AMTR_s00044p00169460 R-ATR-1125910 AMTR_s00044p00169460 [plastid stroma] R-ATR-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119367 Polyisoprenoid biosynthesis none Amborella trichopoda AMTR_s00044p00180330 R-ATR-1123895 AMTR_s00044p00180330 [cytosol] R-ATR-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119334 Ethylene biosynthesis from methionine none Amborella trichopoda AMTR_s00044p00180330 R-ATR-1123895 AMTR_s00044p00180330 [cytosol] R-ATR-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119624 Methionine salvage pathway none Amborella trichopoda AMTR_s00044p00191980 R-ATR-1123757-3 AMTR_s00044p00191980 [cytosol] R-ATR-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119460 Isoleucine biosynthesis from threonine none Amborella trichopoda AMTR_s00044p00191980 R-ATR-1123757-3 AMTR_s00044p00191980 [cytosol] R-ATR-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119473 Cytokinins-O-glucoside biosynthesis none Amborella trichopoda AMTR_s00044p00191980 R-ATR-1123757-3 AMTR_s00044p00191980 [cytosol] R-ATR-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119496 Pantothenate biosynthesis I none Amborella trichopoda AMTR_s00044p00191980 R-ATR-1123757-3 AMTR_s00044p00191980 [cytosol] R-ATR-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119540 Leucine biosynthesis none Amborella trichopoda AMTR_s00044p00191980 R-ATR-1123757-3 AMTR_s00044p00191980 [cytosol] R-ATR-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119544 Pantothenate biosynthesis II none Amborella trichopoda AMTR_s00044p00196850 R-ATR-1123757-2 AMTR_s00044p00196850 [cytosol] R-ATR-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119460 Isoleucine biosynthesis from threonine none Amborella trichopoda AMTR_s00044p00196850 R-ATR-1123757-2 AMTR_s00044p00196850 [cytosol] R-ATR-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119473 Cytokinins-O-glucoside biosynthesis none Amborella trichopoda AMTR_s00044p00196850 R-ATR-1123757-2 AMTR_s00044p00196850 [cytosol] R-ATR-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119496 Pantothenate biosynthesis I none Amborella trichopoda AMTR_s00044p00196850 R-ATR-1123757-2 AMTR_s00044p00196850 [cytosol] R-ATR-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119540 Leucine biosynthesis none Amborella trichopoda AMTR_s00044p00196850 R-ATR-1123757-2 AMTR_s00044p00196850 [cytosol] R-ATR-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119544 Pantothenate biosynthesis II none Amborella trichopoda AMTR_s00044p00197530 R-ATR-1123757-4 AMTR_s00044p00197530 [cytosol] R-ATR-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119460 Isoleucine biosynthesis from threonine none Amborella trichopoda AMTR_s00044p00197530 R-ATR-1123757-4 AMTR_s00044p00197530 [cytosol] R-ATR-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119473 Cytokinins-O-glucoside biosynthesis none Amborella trichopoda AMTR_s00044p00197530 R-ATR-1123757-4 AMTR_s00044p00197530 [cytosol] R-ATR-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119496 Pantothenate biosynthesis I none Amborella trichopoda AMTR_s00044p00197530 R-ATR-1123757-4 AMTR_s00044p00197530 [cytosol] R-ATR-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119540 Leucine biosynthesis none Amborella trichopoda AMTR_s00044p00197530 R-ATR-1123757-4 AMTR_s00044p00197530 [cytosol] R-ATR-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119544 Pantothenate biosynthesis II none Amborella trichopoda AMTR_s00045p00043360 R-ATR-1125341 AMTR_s00045p00043360 [cytosol] R-ATR-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119460 Isoleucine biosynthesis from threonine none Amborella trichopoda AMTR_s00045p00043360 R-ATR-1125341 AMTR_s00045p00043360 [cytosol] R-ATR-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119600 Valine biosynthesis none Amborella trichopoda AMTR_s00045p00073480 R-ATR-1128366 AMTR_s00045p00073480 [cytosol] R-ATR-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119334 Ethylene biosynthesis from methionine none Amborella trichopoda AMTR_s00045p00073480 R-ATR-1128366 AMTR_s00045p00073480 [cytosol] R-ATR-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119501 S-adenosyl-L-methionine cycle none Amborella trichopoda AMTR_s00045p00073480 R-ATR-1128366 AMTR_s00045p00073480 [cytosol] R-ATR-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119624 Methionine salvage pathway none Amborella trichopoda AMTR_s00045p00073480 R-ATR-9025797 AMTR_s00045p00073480 [cytosol] R-ATR-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9025754 Mugineic acid biosynthesis none Amborella trichopoda AMTR_s00045p00116700 R-ATR-9612399 AMTR_s00045p00116700 [peroxisomal matrix] R-ATR-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119612 Cysteine degradation none Amborella trichopoda AMTR_s00045p00116700 R-ATR-9612380 AMTR_s00045p00116700 [cytosol] R-ATR-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119612 Cysteine degradation none Amborella trichopoda AMTR_s00045p00124970 R-ATR-1126830 AMTR_s00045p00124970 [mitochondrial matrix] R-ATR-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119533 TCA cycle (plant) none Amborella trichopoda AMTR_s00045p00138400 R-ATR-1129914 AMTR_s00045p00138400 [nucleoplasm] R-ATR-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5608118 Auxin signalling none Amborella trichopoda AMTR_s00045p00146180 R-ATR-9826674 AMTR_s00045p00146180 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00045p00153850 R-ATR-8933842 AMTR_s00045p00153850 [cytosol] R-ATR-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8933811 Circadian rhythm none Amborella trichopoda AMTR_s00045p00153850 R-ATR-8933843 AMTR_s00045p00153850 [nucleoplasm] R-ATR-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8933811 Circadian rhythm none Amborella trichopoda AMTR_s00045p00169620 R-ATR-9826705 OSH71 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00045p00177240 R-ATR-9025712 AMTR_s00045p00177240 [cytosol] R-ATR-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9025754 Mugineic acid biosynthesis none Amborella trichopoda AMTR_s00046p00058640 R-ATR-9920344 AMTR_s00046p00058640 [nucleoplasm] R-ATR-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8934108 Short day regulated expression of florigens none Amborella trichopoda AMTR_s00046p00143030 R-ATR-9640752 AMTR_s00046p00143030 [nucleoplasm] R-ATR-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640882 Assembly of pre-replication complex none Amborella trichopoda AMTR_s00046p00143030 R-ATR-9640752 AMTR_s00046p00143030 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00047p00122380 R-ATR-5654755 AMTR_s00047p00122380 [cytosol] R-ATR-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119393 Asparagine degradation I none Amborella trichopoda AMTR_s00047p00181740 R-ATR-8934299 AMTR_s00047p00181740 [nucleoplasm] R-ATR-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8934036 Long day regulated expression of florigens none Amborella trichopoda AMTR_s00047p00181740 R-ATR-8934299 AMTR_s00047p00181740 [nucleoplasm] R-ATR-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8934257 Transition from vegetative to reproductive shoot apical meristem none Amborella trichopoda AMTR_s00047p00181740 R-ATR-8934299 AMTR_s00047p00181740 [nucleoplasm] R-ATR-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9609102 Flower development none Amborella trichopoda AMTR_s00047p00205870 R-ATR-3240748 AMTR_s00047p00205870 [cytosol] R-ATR-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Amborella trichopoda AMTR_s00047p00217500 R-ATR-1129585 AMTR_s00047p00217500 [cytosol] R-ATR-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119265 Tetrahydrofolate biosynthesis I none Amborella trichopoda AMTR_s00047p00217500 R-ATR-1129585 AMTR_s00047p00217500 [cytosol] R-ATR-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119523 Tetrahydrofolate biosynthesis II none Amborella trichopoda AMTR_s00047p00228170 R-ATR-9639171 AMTR_s00047p00228170 [plant-type vacuole membrane] R-ATR-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9639136 Response to Aluminum stress none Amborella trichopoda AMTR_s00048p00050940 R-ATR-9638999 AMTR_s00048p00050940 [cytosol] R-ATR-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119434 Phytic acid biosynthesis (lipid-independent) none Amborella trichopoda AMTR_s00048p00101790 R-ATR-1129650 AMTR_s00048p00101790 [cytosol] R-ATR-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119418 Suberin biosynthesis none Amborella trichopoda AMTR_s00048p00116140 R-ATR-1127398 AMTR_s00048p00116140 [plasma membrane] R-ATR-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119314 Cellulose biosynthesis none Amborella trichopoda AMTR_s00048p00116140 R-ATR-1127398 AMTR_s00048p00116140 [plasma membrane] R-ATR-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9639861 Development of root hair none Amborella trichopoda AMTR_s00048p00119140 R-ATR-1122783 AMTR_s00048p00119140 [chloroplast stroma] R-ATR-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119402 Phospholipid biosynthesis I none Amborella trichopoda AMTR_s00048p00123660 R-ATR-1127989 AMTR_s00048p00123660 [plastid stroma] R-ATR-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119430 Chorismate biosynthesis none Amborella trichopoda AMTR_s00048p00138890 R-ATR-5149678 AMTR_s00048p00138890 [plastid stroma] R-ATR-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119519 Calvin cycle none Amborella trichopoda AMTR_s00048p00139530 R-ATR-8854448 AMTR_s00048p00139530 [cytosol] R-ATR-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119276 Choline biosynthesis III none Amborella trichopoda AMTR_s00048p00159380 R-ATR-5632174 AMTR_s00048p00159380 [nucleoplasm] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00048p00159380 R-ATR-5632174 AMTR_s00048p00159380 [nucleoplasm] R-ATR-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5654828 Strigolactone signaling none Amborella trichopoda AMTR_s00048p00159380 R-ATR-5632174 AMTR_s00048p00159380 [nucleoplasm] R-ATR-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6787011 Jasmonic acid signaling none Amborella trichopoda AMTR_s00048p00159380 R-ATR-5632174 AMTR_s00048p00159380 [nucleoplasm] R-ATR-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9608575 Reproductive meristem phase change none Amborella trichopoda AMTR_s00048p00161770 R-ATR-1123046 AMTR_s00048p00161770 [cytosol] R-ATR-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119386 UDP-N-acetylgalactosamine biosynthesis none Amborella trichopoda AMTR_s00048p00216350 R-ATR-9035614 AMTR_s00048p00216350 [cytosol] R-ATR-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9035605 Regulation of seed size none Amborella trichopoda AMTR_s00048p00216350 R-ATR-9035651 AMTR_s00048p00216350 [nucleoplasm] R-ATR-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9035605 Regulation of seed size none Amborella trichopoda AMTR_s00048p00218250 R-ATR-9640716 AMTR_s00048p00218250 [nucleoplasm] R-ATR-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9030654 Primary root development none Amborella trichopoda AMTR_s00048p00218250 R-ATR-9640716 AMTR_s00048p00218250 [nucleoplasm] R-ATR-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640882 Assembly of pre-replication complex none Amborella trichopoda AMTR_s00048p00218250 R-ATR-9640716 AMTR_s00048p00218250 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00048p00220930 R-ATR-3321260 AMTR_s00048p00220930 [chloroplast stroma] R-ATR-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119287 Vitamin E biosynthesis none Amborella trichopoda AMTR_s00048p00222210 R-ATR-3321260-2 AMTR_s00048p00222210 [chloroplast stroma] R-ATR-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119287 Vitamin E biosynthesis none Amborella trichopoda AMTR_s00049p00113500 R-ATR-1126373 AMTR_s00049p00113500 [cytosol] R-ATR-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Amborella trichopoda AMTR_s00049p00131690 R-ATR-9025351 AMTR_s00049p00131690 [cytosol] R-ATR-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119402 Phospholipid biosynthesis I none Amborella trichopoda AMTR_s00049p00184300 R-ATR-1122601 AMTR_s00049p00184300 [mitochondrial inner membrane] R-ATR-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119533 TCA cycle (plant) none Amborella trichopoda AMTR_s00049p00221660 R-ATR-1125910-2 AMTR_s00049p00221660 [plastid stroma] R-ATR-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119367 Polyisoprenoid biosynthesis none Amborella trichopoda AMTR_s00050p00227710 R-ATR-5367761-2 AMTR_s00050p00227710 [plastid stroma] R-ATR-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5367729 Strigolactone biosynthesis none Amborella trichopoda AMTR_s00051p00204250 R-ATR-8879009 AMTR_s00051p00204250 [nucleoplasm] R-ATR-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8879007 Response to cold temperature none Amborella trichopoda AMTR_s00051p00208220 R-ATR-8986682 AMTR_s00051p00208220 [extracellular region] R-ATR-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8986768 Anther and pollen development none Amborella trichopoda AMTR_s00052p00100800 R-ATR-4723660 AMTR_s00052p00100800 [plastid stroma] R-ATR-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119464 Methylerythritol phosphate pathway none Amborella trichopoda AMTR_s00052p00100800 R-ATR-1125869 AMTR_s00052p00100800 [cytosol] R-ATR-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119594 Pyridoxal 5'-phosphate biosynthesis none Amborella trichopoda AMTR_s00052p00100800 R-ATR-1125869 AMTR_s00052p00100800 [cytosol] R-ATR-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119629 Thiamine biosynthesis none Amborella trichopoda AMTR_s00053p00045580 R-ATR-1129809 AMTR_s00053p00045580 [mitochondrial inner membrane] R-ATR-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119410 Ascorbate biosynthesis none Amborella trichopoda AMTR_s00053p00048140 R-ATR-5631958 AMTR_s00053p00048140 [cytosol] R-ATR-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119289 Arginine degradation none Amborella trichopoda AMTR_s00053p00048140 R-ATR-1122345 AMTR_s00053p00048140 [cytosol] R-ATR-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119318 Proline biosynthesis V (from arginine) none Amborella trichopoda AMTR_s00053p00048140 R-ATR-1122345 AMTR_s00053p00048140 [cytosol] R-ATR-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119631 Proline biosynthesis I none Amborella trichopoda AMTR_s00053p00093890 R-ATR-8987571 AMTR_s00053p00093890 [peroxisomal matrix] R-ATR-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119312 Photorespiration none Amborella trichopoda AMTR_s00053p00173580 R-ATR-1127928 AMTR_s00053p00173580 [cytosol] R-ATR-1119595 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119595 Mannose degradation none Amborella trichopoda AMTR_s00053p00173580 R-ATR-1127928 AMTR_s00053p00173580 [cytosol] R-ATR-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119601 Trehalose degradation II none Amborella trichopoda AMTR_s00053p00173580 R-ATR-1127928 AMTR_s00053p00173580 [cytosol] R-ATR-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119628 GDP-mannose metabolism none Amborella trichopoda AMTR_s00053p00186800 R-ATR-9025331 AMTR_s00053p00186800 [cytosol] R-ATR-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119402 Phospholipid biosynthesis I none Amborella trichopoda AMTR_s00053p00188250 R-ATR-1123943 AMTR_s00053p00188250 [plastid] R-ATR-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119365 Lysine degradation II none Amborella trichopoda AMTR_s00053p00213400 R-ATR-9930304 ACA7 [plasma membrane] R-ATR-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9766881 TF network involved in salinity response none Amborella trichopoda AMTR_s00054p00039660 R-ATR-8987460 AMTR_s00054p00039660 [chloroplast] R-ATR-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119312 Photorespiration none Amborella trichopoda AMTR_s00054p00174840 R-ATR-9675818 AMTR_s00054p00174840 [nucleoplasm] R-ATR-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675815 Leading strand synthesis none Amborella trichopoda AMTR_s00055p00061980 R-ATR-1123786 AMTR_s00055p00061980 R-ATR-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119403 Removal of superoxide radicals none Amborella trichopoda AMTR_s00055p00080730 R-ATR-1126440 AMTR_s00055p00080730 [plastid stroma] R-ATR-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119430 Chorismate biosynthesis none Amborella trichopoda AMTR_s00055p00157580 R-ATR-9639016 AMTR_s00055p00157580 [cytosol] R-ATR-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119410 Ascorbate biosynthesis none Amborella trichopoda AMTR_s00055p00157580 R-ATR-9639016 AMTR_s00055p00157580 [cytosol] R-ATR-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119434 Phytic acid biosynthesis (lipid-independent) none Amborella trichopoda AMTR_s00055p00205880 R-ATR-1129514 AMTR_s00055p00205880 [chloroplast] R-ATR-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119579 Glycine betaine biosynthesis III none Amborella trichopoda AMTR_s00055p00224220 R-ATR-1122403 AMTR_s00055p00224220 [amyloplast] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00056p00036030 R-ATR-6786999 AMTR_s00056p00036030 [nucleoplasm] R-ATR-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6787011 Jasmonic acid signaling none Amborella trichopoda AMTR_s00056p00057420 R-ATR-5367761 AMTR_s00056p00057420 [plastid stroma] R-ATR-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5367729 Strigolactone biosynthesis none Amborella trichopoda AMTR_s00056p00094740 R-ATR-2731026 AMTR_s00056p00094740 [endoplasmic reticulum membrane] R-ATR-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119557 GA12 biosynthesis none Amborella trichopoda AMTR_s00056p00120420 R-ATR-1122541-2 AMTR_s00056p00120420 [cytosol] R-ATR-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Amborella trichopoda AMTR_s00056p00120420 R-ATR-1122541-2 AMTR_s00056p00120420 [cytosol] R-ATR-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Amborella trichopoda AMTR_s00056p00122020 R-ATR-1122541 AMTR_s00056p00122020 [cytosol] R-ATR-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Amborella trichopoda AMTR_s00056p00122020 R-ATR-1122541 AMTR_s00056p00122020 [cytosol] R-ATR-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Amborella trichopoda AMTR_s00056p00143320 R-ATR-1125997 AMTR_s00056p00143320 [nucleoplasm] R-ATR-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5608118 Auxin signalling none Amborella trichopoda AMTR_s00056p00143320 R-ATR-1125997 AMTR_s00056p00143320 [nucleoplasm] R-ATR-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9030680 Crown root development none Amborella trichopoda AMTR_s00056p00164210 R-ATR-9639029 AMTR_s00056p00164210 [cytosol] R-ATR-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119434 Phytic acid biosynthesis (lipid-independent) none Amborella trichopoda AMTR_s00056p00204920 R-ATR-9826667 AMTR_s00056p00204920 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00056p00210540 R-ATR-1127523 AMTR_s00056p00210540 [cytosol] R-ATR-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Amborella trichopoda AMTR_s00057p00030490 R-ATR-9640745 AMTR_s00057p00030490 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00057p00030490 R-ATR-9640745 AMTR_s00057p00030490 [nucleoplasm] R-ATR-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675824 DNA replication Initiation none Amborella trichopoda AMTR_s00057p00039750 R-ATR-9640664 AMTR_s00057p00039750 [nucleoplasm] R-ATR-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640760 G1 phase none Amborella trichopoda AMTR_s00057p00057240 R-ATR-9645891 AMTR_s00057p00057240 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00057p00074460 R-ATR-9646016 AMTR_s00057p00074460 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00057p00074460 R-ATR-9646016 AMTR_s00057p00074460 [nucleoplasm] R-ATR-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675885 Lagging strand synthesis none Amborella trichopoda AMTR_s00057p00116280 R-ATR-1123894 AMTR_s00057p00116280 [plasma membrane] R-ATR-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119314 Cellulose biosynthesis none Amborella trichopoda AMTR_s00057p00116410 R-ATR-1123894-2 AMTR_s00057p00116410 [plasma membrane] R-ATR-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119314 Cellulose biosynthesis none Amborella trichopoda AMTR_s00057p00123940 R-ATR-4723654 AMTR_s00057p00123940 [plastid stroma] R-ATR-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119464 Methylerythritol phosphate pathway none Amborella trichopoda AMTR_s00057p00123940 R-ATR-1130030 AMTR_s00057p00123940 [cytosol] R-ATR-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119594 Pyridoxal 5'-phosphate biosynthesis none Amborella trichopoda AMTR_s00057p00123940 R-ATR-1130030 AMTR_s00057p00123940 [cytosol] R-ATR-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119629 Thiamine biosynthesis none Amborella trichopoda AMTR_s00057p00137940 R-ATR-1127695-3 AMTR_s00057p00137940 [plastid stroma] R-ATR-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119430 Chorismate biosynthesis none Amborella trichopoda AMTR_s00057p00139000 R-ATR-1127695 AMTR_s00057p00139000 [plastid stroma] R-ATR-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119430 Chorismate biosynthesis none Amborella trichopoda AMTR_s00057p00139480 R-ATR-1127695-2 AMTR_s00057p00139480 [plastid stroma] R-ATR-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119430 Chorismate biosynthesis none Amborella trichopoda AMTR_s00057p00145850 R-ATR-1124206 AMTR_s00057p00145850 [cytosol] R-ATR-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119403 Removal of superoxide radicals none Amborella trichopoda AMTR_s00057p00145850 R-ATR-1124206 AMTR_s00057p00145850 [cytosol] R-ATR-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9611432 Recognition of fungal and bacterial pathogens and immunity response none Amborella trichopoda AMTR_s00057p00178040 R-ATR-5606478 AMTR_s00057p00178040 [plastid stroma] R-ATR-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119419 Lysine biosynthesis VI none Amborella trichopoda AMTR_s00058p00047610 R-ATR-1130247-2 AMTR_s00058p00047610 [plastid stroma] R-ATR-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119519 Calvin cycle none Amborella trichopoda AMTR_s00058p00048170 R-ATR-1129723 AMTR_s00058p00048170 [chloroplast] R-ATR-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119494 Tryptophan biosynthesis none Amborella trichopoda AMTR_s00058p00051350 R-ATR-9025712-2 AMTR_s00058p00051350 [cytosol] R-ATR-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9025754 Mugineic acid biosynthesis none Amborella trichopoda AMTR_s00058p00113540 R-ATR-1126095 AMTR_s00058p00113540 [cytosol] R-ATR-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119389 Phenylalanine biosynthesis I none Amborella trichopoda AMTR_s00058p00143650 R-ATR-1129926 AMTR_s00058p00143650 [cytosol] R-ATR-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Amborella trichopoda AMTR_s00058p00159400 R-ATR-9658681 AMTR_s00058p00159400 [plasma membrane] R-ATR-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119567 Beta-alanine biosynthesis I none Amborella trichopoda AMTR_s00058p00175640 R-ATR-1127292 AMTR_s00058p00175640 [plastid stroma] R-ATR-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Amborella trichopoda AMTR_s00058p00187110 R-ATR-1122347 AMTR_s00058p00187110 [cytosol] R-ATR-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119384 NAD biosynthesis I (from aspartate) none Amborella trichopoda AMTR_s00058p00191040 R-ATR-1130327 AMTR_s00058p00191040 [cytosol] R-ATR-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119586 Cyanate degradation none Amborella trichopoda AMTR_s00058p00194850 R-ATR-1126916 AMTR_s00058p00194850 [plastid stroma] R-ATR-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119464 Methylerythritol phosphate pathway none Amborella trichopoda AMTR_s00058p00214360 R-ATR-1127625 AMTR_s00058p00214360 [cytosol] R-ATR-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119265 Tetrahydrofolate biosynthesis I none Amborella trichopoda AMTR_s00058p00214360 R-ATR-1127625 AMTR_s00058p00214360 [cytosol] R-ATR-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119523 Tetrahydrofolate biosynthesis II none Amborella trichopoda AMTR_s00058p00214740 R-ATR-1127625-2 AMTR_s00058p00214740 [cytosol] R-ATR-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119265 Tetrahydrofolate biosynthesis I none Amborella trichopoda AMTR_s00058p00214740 R-ATR-1127625-2 AMTR_s00058p00214740 [cytosol] R-ATR-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119523 Tetrahydrofolate biosynthesis II none Amborella trichopoda AMTR_s00058p00216470 R-ATR-9608682 AMTR_s00058p00216470 [nucleoplasm] R-ATR-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8934036 Long day regulated expression of florigens none Amborella trichopoda AMTR_s00058p00216470 R-ATR-9608682 AMTR_s00058p00216470 [nucleoplasm] R-ATR-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9608575 Reproductive meristem phase change none Amborella trichopoda AMTR_s00058p00216470 R-ATR-9608606 AMTR_s00058p00216470 [cytosol] R-ATR-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9608575 Reproductive meristem phase change none Amborella trichopoda AMTR_s00058p00218380 R-ATR-9675391 AMTR_s00058p00218380 [nucleoplasm] R-ATR-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675508 Root elongation none Amborella trichopoda AMTR_s00059p00054360 R-ATR-1129247 AMTR_s00059p00054360 [mitochondrial inner membrane] R-ATR-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119533 TCA cycle (plant) none Amborella trichopoda AMTR_s00059p00133780 R-ATR-9675274 AMTR_s00059p00133780 [nucleoplasm] R-ATR-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9030654 Primary root development none Amborella trichopoda AMTR_s00059p00141510 R-ATR-9826620 HOX12/ OsGT1 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00059p00141510 R-ATR-9826620 HOX12/ OsGT1 [nucleoplasm] R-ATR-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Amborella trichopoda AMTR_s00059p00150240 R-ATR-1129208 AMTR_s00059p00150240 [chloroplast envelope] R-ATR-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119402 Phospholipid biosynthesis I none Amborella trichopoda AMTR_s00059p00159100 R-ATR-1128745 AMTR_s00059p00159100 [plastid stroma] R-ATR-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119464 Methylerythritol phosphate pathway none Amborella trichopoda AMTR_s00060p00013040 R-ATR-5654911 AMTR_s00060p00013040 [Golgi lumen] R-ATR-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5654909 Xylan biosynthesis none Amborella trichopoda AMTR_s00060p00098750 R-ATR-5654750 AMTR_s00060p00098750 [cytosol] R-ATR-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119393 Asparagine degradation I none Amborella trichopoda AMTR_s00060p00109730 R-ATR-1127192 AMTR_s00060p00109730 [cytosol] R-ATR-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119291 Nitrate assimilation none Amborella trichopoda AMTR_s00060p00109730 R-ATR-1127192 AMTR_s00060p00109730 [cytosol] R-ATR-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119293 Glutamine biosynthesis I none Amborella trichopoda AMTR_s00060p00109730 R-ATR-1127192 AMTR_s00060p00109730 [cytosol] R-ATR-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119443 Ammonia assimilation cycle none Amborella trichopoda AMTR_s00060p00116070 R-ATR-1125564 AMTR_s00060p00116070 [cytosol] R-ATR-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119291 Nitrate assimilation none Amborella trichopoda AMTR_s00060p00116070 R-ATR-1125564 AMTR_s00060p00116070 [cytosol] R-ATR-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119293 Glutamine biosynthesis I none Amborella trichopoda AMTR_s00060p00116070 R-ATR-1125564 AMTR_s00060p00116070 [cytosol] R-ATR-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119443 Ammonia assimilation cycle none Amborella trichopoda AMTR_s00060p00168860 R-ATR-1122351 AMTR_s00060p00168860 [cytosol] R-ATR-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119354 Asparagine biosynthesis III none Amborella trichopoda AMTR_s00060p00168860 R-ATR-5633281 AMTR_s00060p00168860 [cytosol] R-ATR-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119495 Citrulline biosynthesis none Amborella trichopoda AMTR_s00060p00168860 R-ATR-1122351 AMTR_s00060p00168860 [cytosol] R-ATR-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119553 Asparagine biosynthesis none Amborella trichopoda AMTR_s00061p00120110 R-ATR-1127443 AMTR_s00061p00120110 [amyloplast] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00061p00120110 R-ATR-1122818 AMTR_s00061p00120110 [cytosol] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00061p00133330 R-ATR-1127254-2 AMTR_s00061p00133330 [cytosol] R-ATR-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119317 Spermine biosynthesis none Amborella trichopoda AMTR_s00061p00133330 R-ATR-1127254-2 AMTR_s00061p00133330 [cytosol] R-ATR-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119343 Spermidine biosynthesis none Amborella trichopoda AMTR_s00061p00145220 R-ATR-1124348 AMTR_s00061p00145220 [cytosol] R-ATR-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119465 Sucrose biosynthesis none Amborella trichopoda AMTR_s00061p00163810 R-ATR-5149694 AMTR_s00061p00163810 [plastid stroma] R-ATR-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119519 Calvin cycle none Amborella trichopoda AMTR_s00061p00181710 R-ATR-1130006 AMTR_s00061p00181710 [plastid stroma] R-ATR-1119569 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119569 Kievitone biosynthesis none Amborella trichopoda AMTR_s00061p00189810 R-ATR-1127491 AMTR_s00061p00189810 [chloroplast] R-ATR-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119312 Photorespiration none Amborella trichopoda AMTR_s00061p00196410 R-ATR-1124959 AMTR_s00061p00196410 [cytosol] R-ATR-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119623 Acyl-CoA synthetase pathway none Amborella trichopoda AMTR_s00061p00197130 R-ATR-1123161 AMTR_s00061p00197130 [chloroplast] R-ATR-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119494 Tryptophan biosynthesis none Amborella trichopoda AMTR_s00061p00198380 R-ATR-1125369-2 AMTR_s00061p00198380 [cytosol] R-ATR-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119496 Pantothenate biosynthesis I none Amborella trichopoda AMTR_s00061p00198380 R-ATR-1125369-2 AMTR_s00061p00198380 [cytosol] R-ATR-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119544 Pantothenate biosynthesis II none Amborella trichopoda AMTR_s00061p00199330 R-ATR-1125369 AMTR_s00061p00199330 [cytosol] R-ATR-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119496 Pantothenate biosynthesis I none Amborella trichopoda AMTR_s00061p00199330 R-ATR-1125369 AMTR_s00061p00199330 [cytosol] R-ATR-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119544 Pantothenate biosynthesis II none Amborella trichopoda AMTR_s00061p00203040 R-ATR-1126998 AMTR_s00061p00203040 [cytosol] R-ATR-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119615 Mevalonate pathway none Amborella trichopoda AMTR_s00062p00036220 R-ATR-9918175 AMTR_s00062p00036220 [amyloplast] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00062p00037290 R-ATR-1129867 AMTR_s00062p00037290 [chloroplast] R-ATR-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119494 Tryptophan biosynthesis none Amborella trichopoda AMTR_s00062p00109550 R-ATR-1127999 AMTR_s00062p00109550 [mitochondrial inner membrane] R-ATR-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119260 Cardiolipin biosynthesis none Amborella trichopoda AMTR_s00062p00185230 R-ATR-9658573 AMTR_s00062p00185230 [endoplasmic reticulum lumen] R-ATR-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119502 Allantoin degradation none Amborella trichopoda AMTR_s00062p00189550 R-ATR-5149643 AMTR_s00062p00189550 [plastid stroma] R-ATR-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119519 Calvin cycle none Amborella trichopoda AMTR_s00062p00190320 R-ATR-1127382 AMTR_s00062p00190320 [cytosol] R-ATR-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119460 Isoleucine biosynthesis from threonine none Amborella trichopoda AMTR_s00062p00190320 R-ATR-1127382 AMTR_s00062p00190320 [cytosol] R-ATR-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119600 Valine biosynthesis none Amborella trichopoda AMTR_s00062p00191350 R-ATR-5149657 AMTR_s00062p00191350 [plastid stroma] R-ATR-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119519 Calvin cycle none Amborella trichopoda AMTR_s00062p00191350 R-ATR-1129239 AMTR_s00062p00191350 [cytosol] R-ATR-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119570 Cytosolic glycolysis none Amborella trichopoda AMTR_s00062p00194620 R-ATR-9026148 AMTR_s00062p00194620 [mitochondrion] R-ATR-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119458 Glutamate degradation none Amborella trichopoda AMTR_s00062p00194620 R-ATR-1130288 AMTR_s00062p00194620 [cytosol] R-ATR-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119610 Biotin biosynthesis II none Amborella trichopoda AMTR_s00062p00211520 R-ATR-9035727 AMTR_s00062p00211520 [cytosol] R-ATR-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9035605 Regulation of seed size none Amborella trichopoda AMTR_s00062p00211520 R-ATR-9035692 AMTR_s00062p00211520 [nucleoplasm] R-ATR-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9035605 Regulation of seed size none Amborella trichopoda AMTR_s00063p00191490 R-ATR-5603891 AMTR_s00063p00191490 [plastid stroma] R-ATR-1119420 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119420 Glutamate biosynthesis V none Amborella trichopoda AMTR_s00063p00191490 R-ATR-1125410 AMTR_s00063p00191490 [chloroplast stroma] R-ATR-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119443 Ammonia assimilation cycle none Amborella trichopoda AMTR_s00063p00197920 R-ATR-9611465 AMTR_s00063p00197920 [nucleoplasm] R-ATR-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9611432 Recognition of fungal and bacterial pathogens and immunity response none Amborella trichopoda AMTR_s00063p00197920 R-ATR-9611445 AMTR_s00063p00197920 [nucleoplasm] R-ATR-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9611432 Recognition of fungal and bacterial pathogens and immunity response none Amborella trichopoda AMTR_s00064p00094890 R-ATR-9658664 AMTR_s00064p00094890 [plasma membrane] R-ATR-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119567 Beta-alanine biosynthesis I none Amborella trichopoda AMTR_s00064p00096040 R-ATR-8987557 AMTR_s00064p00096040 [mitochondrial matrix] R-ATR-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119312 Photorespiration none Amborella trichopoda AMTR_s00064p00100410 R-ATR-1127734 AMTR_s00064p00100410 [cytosol] R-ATR-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119506 tyrosine degradation I none Amborella trichopoda AMTR_s00064p00129240 R-ATR-8986605-2 AMTR_s00064p00129240 [mitochondrial matrix] R-ATR-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119312 Photorespiration none Amborella trichopoda AMTR_s00064p00129240 R-ATR-1124620-2 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-ATR-1119351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119351 Mitochondrial pyruvate metabolism none Amborella trichopoda AMTR_s00064p00129240 R-ATR-1124620-2 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-ATR-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119533 TCA cycle (plant) none Amborella trichopoda AMTR_s00065p00043720 R-ATR-1128173 AMTR_s00065p00043720 [cytosol] R-ATR-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119437 Glutathione redox reactions I none Amborella trichopoda AMTR_s00065p00092420 R-ATR-9035593 AMTR_s00065p00092420 [cytosol] R-ATR-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9035605 Regulation of seed size none Amborella trichopoda AMTR_s00065p00092420 R-ATR-9035634 AMTR_s00065p00092420 [nucleoplasm] R-ATR-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9035605 Regulation of seed size none Amborella trichopoda AMTR_s00065p00092420 R-ATR-9035593 AMTR_s00065p00092420 [cytosol] R-ATR-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9608575 Reproductive meristem phase change none Amborella trichopoda AMTR_s00065p00092420 R-ATR-9035634 AMTR_s00065p00092420 [nucleoplasm] R-ATR-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9608575 Reproductive meristem phase change none Amborella trichopoda AMTR_s00065p00144450 R-ATR-5655075 AMTR_s00065p00144450 [Golgi lumen] R-ATR-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5655101 Xyloglucan biosynthesis none Amborella trichopoda AMTR_s00065p00146710 R-ATR-1127526 AMTR_s00065p00146710 [cytosol] R-ATR-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119332 Jasmonic acid biosynthesis none Amborella trichopoda AMTR_s00065p00157730 R-ATR-9658611 AMTR_s00065p00157730 [plastid stroma] R-ATR-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119263 Arginine biosynthesis none Amborella trichopoda AMTR_s00065p00157730 R-ATR-9658611 AMTR_s00065p00157730 [plastid stroma] R-ATR-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119539 Ornithine biosynthesis none Amborella trichopoda AMTR_s00065p00157730 R-ATR-9658611 AMTR_s00065p00157730 [plastid stroma] R-ATR-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119622 Arginine biosynthesis II (acetyl cycle) none Amborella trichopoda AMTR_s00065p00187410 R-ATR-1128200 AMTR_s00065p00187410 [cytosol] R-ATR-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119316 Phenylpropanoid biosynthesis none Amborella trichopoda AMTR_s00065p00201230 R-ATR-6787933-2 AMTR_s00065p00201230 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00065p00201830 R-ATR-6787933 AMTR_s00065p00201830 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00065p00204450 R-ATR-1123148 AMTR_s00065p00204450 [cytosol] R-ATR-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119300 Glycolipid desaturation none Amborella trichopoda AMTR_s00065p00207880 R-ATR-1130344 AMTR_s00065p00207880 [cytosol] R-ATR-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119389 Phenylalanine biosynthesis I none Amborella trichopoda AMTR_s00066p00037020 R-ATR-9639874-2 AMTR_s00066p00037020 [plasma membrane] R-ATR-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9639861 Development of root hair none Amborella trichopoda AMTR_s00066p00043610 R-ATR-1127173 AMTR_s00066p00043610 [cytosol] R-ATR-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119540 Leucine biosynthesis none Amborella trichopoda AMTR_s00066p00060150 R-ATR-1124791 AMTR_s00066p00060150 [cytosol] R-ATR-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119610 Biotin biosynthesis II none Amborella trichopoda AMTR_s00066p00062630 R-ATR-1123430 AMTR_s00066p00062630 [cytosol] R-ATR-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119437 Glutathione redox reactions I none Amborella trichopoda AMTR_s00066p00082970 R-ATR-1129136 AMTR_s00066p00082970 [plastid stroma] R-ATR-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Amborella trichopoda AMTR_s00066p00085830 R-ATR-9675297 AMTR_s00066p00085830 [mitochondrion] R-ATR-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9030654 Primary root development none Amborella trichopoda AMTR_s00066p00102280 R-ATR-1127527-2 AMTR_s00066p00102280 [cytosol] R-ATR-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Amborella trichopoda AMTR_s00066p00104340 R-ATR-1123563 AMTR_s00066p00104340 [cytosol] R-ATR-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119379 Flavin biosynthesis none Amborella trichopoda AMTR_s00066p00104940 R-ATR-1129184 AMTR_s00066p00104940 [cytosol] R-ATR-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119273 Lysine biosynthesis I none Amborella trichopoda AMTR_s00066p00104940 R-ATR-1129184 AMTR_s00066p00104940 [cytosol] R-ATR-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119283 Lysine biosynthesis II none Amborella trichopoda AMTR_s00066p00104940 R-ATR-5606505 AMTR_s00066p00104940 [plastid stroma] R-ATR-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119419 Lysine biosynthesis VI none Amborella trichopoda AMTR_s00066p00117670 R-ATR-9639010 AMTR_s00066p00117670 [cytosol] R-ATR-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119434 Phytic acid biosynthesis (lipid-independent) none Amborella trichopoda AMTR_s00066p00128970 R-ATR-9675272 AMTR_s00066p00128970 [plasma membrane] R-ATR-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9030654 Primary root development none Amborella trichopoda AMTR_s00066p00141740 R-ATR-1127455 AMTR_s00066p00141740 [cytosol] R-ATR-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119460 Isoleucine biosynthesis from threonine none Amborella trichopoda AMTR_s00066p00141740 R-ATR-1127455 AMTR_s00066p00141740 [cytosol] R-ATR-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119600 Valine biosynthesis none Amborella trichopoda AMTR_s00066p00154510 R-ATR-9675280 AMTR_s00066p00154510 [nucleoplasm] R-ATR-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9030680 Crown root development none Amborella trichopoda AMTR_s00066p00155410 R-ATR-1123092 AMTR_s00066p00155410 [cytosol] R-ATR-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119278 PRPP biosynthesis I none Amborella trichopoda AMTR_s00066p00160090 R-ATR-1122545 AMTR_s00066p00160090 [cytosol] R-ATR-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119331 Cysteine biosynthesis I none Amborella trichopoda AMTR_s00066p00173780 R-ATR-9639789 AMTR_s00066p00173780 [plasma membrane] R-ATR-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9639861 Development of root hair none Amborella trichopoda AMTR_s00066p00201540 R-ATR-9645947 AMTR_s00066p00201540 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00066p00201540 R-ATR-9645947 AMTR_s00066p00201540 [nucleoplasm] R-ATR-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675815 Leading strand synthesis none Amborella trichopoda AMTR_s00066p00201540 R-ATR-9645947 AMTR_s00066p00201540 [nucleoplasm] R-ATR-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675824 DNA replication Initiation none Amborella trichopoda AMTR_s00066p00201540 R-ATR-9645947 AMTR_s00066p00201540 [nucleoplasm] R-ATR-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675885 Lagging strand synthesis none Amborella trichopoda AMTR_s00067p00056150 R-ATR-1128298 AMTR_s00067p00056150 [cytosol] R-ATR-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119271 Threonine degradation none Amborella trichopoda AMTR_s00067p00056150 R-ATR-1128298 AMTR_s00067p00056150 [cytosol] R-ATR-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119610 Biotin biosynthesis II none Amborella trichopoda AMTR_s00067p00087050 R-ATR-5632268 AMTR_s00067p00087050 [nucleoplasm] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00067p00119600 R-ATR-1129896 AMTR_s00067p00119600 [mitochondrial matrix] R-ATR-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119533 TCA cycle (plant) none Amborella trichopoda AMTR_s00067p00144730 R-ATR-1129113 AMTR_s00067p00144730 [cytosol] R-ATR-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119298 Glutathione redox reactions II none Amborella trichopoda AMTR_s00067p00144730 R-ATR-1129113 AMTR_s00067p00144730 [cytosol] R-ATR-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119437 Glutathione redox reactions I none Amborella trichopoda AMTR_s00067p00148600 R-ATR-1126091 AMTR_s00067p00148600 [cytosol] R-ATR-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119394 Pantothenate and coenzyme A biosynthesis III none Amborella trichopoda AMTR_s00067p00148600 R-ATR-1126091 AMTR_s00067p00148600 [cytosol] R-ATR-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119496 Pantothenate biosynthesis I none Amborella trichopoda AMTR_s00067p00148600 R-ATR-1126091 AMTR_s00067p00148600 [cytosol] R-ATR-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119544 Pantothenate biosynthesis II none Amborella trichopoda AMTR_s00067p00148600 R-ATR-1126091 AMTR_s00067p00148600 [cytosol] R-ATR-1119568 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119568 Pantothenate biosynthesis III none Amborella trichopoda AMTR_s00067p00172510 R-ATR-9640789-2 AMTR_s00067p00172510 [nucleoplasm] R-ATR-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640760 G1 phase none Amborella trichopoda AMTR_s00067p00179630 R-ATR-5683263 AMTR_s00067p00179630 [cytosol] R-ATR-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119586 Cyanate degradation none Amborella trichopoda AMTR_s00067p00196920 R-ATR-1128528 AMTR_s00067p00196920 [plasma membrane] R-ATR-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119314 Cellulose biosynthesis none Amborella trichopoda AMTR_s00068p00029180 R-ATR-1125038 AMTR_s00068p00029180 [plastid stroma] R-ATR-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119449 Carotenoid biosynthesis none Amborella trichopoda AMTR_s00068p00147540 R-ATR-1126560 AMTR_s00068p00147540 [cytosol] R-ATR-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119516 Trehalose biosynthesis I none Amborella trichopoda AMTR_s00068p00194270 R-ATR-9640786 AMTR_s00068p00194270 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00068p00194270 R-ATR-9640786 AMTR_s00068p00194270 [nucleoplasm] R-ATR-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675824 DNA replication Initiation none Amborella trichopoda AMTR_s00069p00028020 R-ATR-1128197 AMTR_s00069p00028020 [plastid stroma] R-ATR-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119430 Chorismate biosynthesis none Amborella trichopoda AMTR_s00069p00063160 R-ATR-9675851 AMTR_s00069p00063160 [nucleoplasm] R-ATR-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675815 Leading strand synthesis none Amborella trichopoda AMTR_s00069p00078780 R-ATR-1130394 AMTR_s00069p00078780 [cytosol] R-ATR-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119452 Galactose degradation II none Amborella trichopoda AMTR_s00069p00080510 R-ATR-1124788 AMTR_s00069p00080510 [cytosol] R-ATR-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119601 Trehalose degradation II none Amborella trichopoda AMTR_s00069p00112440 R-ATR-5632261 AMTR_s00069p00112440 [nucleoplasm] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00069p00125390 R-ATR-1129478 AMTR_s00069p00125390 [cytosol] R-ATR-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119273 Lysine biosynthesis I none Amborella trichopoda AMTR_s00069p00125390 R-ATR-1129478 AMTR_s00069p00125390 [cytosol] R-ATR-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119283 Lysine biosynthesis II none Amborella trichopoda AMTR_s00069p00125390 R-ATR-5606483 AMTR_s00069p00125390 [plastid stroma] R-ATR-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119419 Lysine biosynthesis VI none Amborella trichopoda AMTR_s00069p00140780 R-ATR-9826696 AMTR_s00069p00140780 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00069p00141520 R-ATR-8879029 DREB1G [nucleoplasm] R-ATR-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8879007 Response to cold temperature none Amborella trichopoda AMTR_s00069p00168650 R-ATR-1128328 AMTR_s00069p00168650 [cytosol] R-ATR-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119615 Mevalonate pathway none Amborella trichopoda AMTR_s00069p00174350 R-ATR-1125610 AMTR_s00069p00174350 [cytosol] R-ATR-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119276 Choline biosynthesis III none Amborella trichopoda AMTR_s00069p00196720 R-ATR-9608680 AMTR_s00069p00196720 [nucleoplasm] R-ATR-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9608575 Reproductive meristem phase change none Amborella trichopoda AMTR_s00069p00196720 R-ATR-9608583 AMTR_s00069p00196720 [cytosol] R-ATR-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9608575 Reproductive meristem phase change none Amborella trichopoda AMTR_s00069p00198820 R-ATR-3899389 AMTR_s00069p00198820 [plasma membrane] R-ATR-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-3899351 Abscisic acid (ABA) mediated signaling none Amborella trichopoda AMTR_s00069p00198820 R-ATR-3899371 phospho-AMTR_s00069p00198820 [plasma membrane] R-ATR-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-3899351 Abscisic acid (ABA) mediated signaling none Amborella trichopoda AMTR_s00070p00097310 R-ATR-1125261 AMTR_s00070p00097310 R-ATR-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119400 Methionine biosynthesis II none Amborella trichopoda AMTR_s00070p00192400 R-ATR-8987574 AMTR_s00070p00192400 [mitochondrial matrix] R-ATR-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119311 Glycine biosynthesis I none Amborella trichopoda AMTR_s00071p00038040 R-ATR-1126488 AMTR_s00071p00038040 [mitochondrial inner membrane] R-ATR-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119402 Phospholipid biosynthesis I none Amborella trichopoda AMTR_s00071p00086150 R-ATR-1122242 AMTR_s00071p00086150 [cytosol] R-ATR-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119267 Phenylalanine degradation III none Amborella trichopoda AMTR_s00071p00087100 R-ATR-1122242-2 AMTR_s00071p00087100 [cytosol] R-ATR-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119267 Phenylalanine degradation III none Amborella trichopoda AMTR_s00071p00121710 R-ATR-1125275 AMTR_s00071p00121710 [cytosol] R-ATR-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119629 Thiamine biosynthesis none Amborella trichopoda AMTR_s00071p00195460 R-ATR-6787199 AMTR_s00071p00195460 [nucleoplasm] R-ATR-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6787011 Jasmonic acid signaling none Amborella trichopoda AMTR_s00072p00171260 R-ATR-9611544 SPL11 [nucleoplasm] R-ATR-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9611432 Recognition of fungal and bacterial pathogens and immunity response none Amborella trichopoda AMTR_s00072p00171260 R-ATR-9611440 phospho-phosphorylated-SPL11 [nucleoplasm] R-ATR-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9611432 Recognition of fungal and bacterial pathogens and immunity response none Amborella trichopoda AMTR_s00073p00033500 R-ATR-9826683 HSFB4A [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00073p00061640 R-ATR-9826604 AMTR_s00073p00061640 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00074p00101590 R-ATR-8933714 AMTR_s00074p00101590 [nucleoplasm] R-ATR-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8933811 Circadian rhythm none Amborella trichopoda AMTR_s00074p00162130 R-ATR-1124083 AMTR_s00074p00162130 [cytosol] R-ATR-1119323 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119323 Lipid-A-precursor biosynthesis none Amborella trichopoda AMTR_s00076p00039590 R-ATR-4754219 AMTR_s00076p00039590 [plastid stroma] R-ATR-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119449 Carotenoid biosynthesis none Amborella trichopoda AMTR_s00077p00037200 R-ATR-9640723-2 AMTR_s00077p00037200 [nucleoplasm] R-ATR-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640887 G1/S transition none Amborella trichopoda AMTR_s00077p00043830 R-ATR-1129811 AMTR_s00077p00043830 [mitochondrion] R-ATR-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119403 Removal of superoxide radicals none Amborella trichopoda AMTR_s00077p00107120 R-ATR-1127076 AMTR_s00077p00107120 [cytosol] R-ATR-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119418 Suberin biosynthesis none Amborella trichopoda AMTR_s00077p00107120 R-ATR-1127076 AMTR_s00077p00107120 [cytosol] R-ATR-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119582 Phenylpropanoid biosynthesis, initial reactions none Amborella trichopoda AMTR_s00077p00142370 R-ATR-5654816 AMTR_s00077p00142370 [nucleoplasm] R-ATR-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5654828 Strigolactone signaling none Amborella trichopoda AMTR_s00077p00171470 R-ATR-8868904 AMTR_s00077p00171470 [endoplasmic reticulum membrane] R-ATR-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8868949 Intracellular auxin transport none Amborella trichopoda AMTR_s00078p00051300 R-ATR-1125906 AMTR_s00078p00051300 [cytosol] R-ATR-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119276 Choline biosynthesis III none Amborella trichopoda AMTR_s00078p00063510 R-ATR-1122934 AMTR_s00078p00063510 [plastid stroma] R-ATR-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119519 Calvin cycle none Amborella trichopoda AMTR_s00078p00100600 R-ATR-4752546 AMTR_s00078p00100600 [plastid stroma] R-ATR-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119498 Phylloquinone biosynthesis none Amborella trichopoda AMTR_s00078p00106750 R-ATR-6787276 AMTR_s00078p00106750 [plastid stroma] R-ATR-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119261 Salicylate biosynthesis none Amborella trichopoda AMTR_s00078p00106750 R-ATR-6787950 AMTR_s00078p00106750 [nucleoplasm] R-ATR-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6788019 Salicylic acid signaling none Amborella trichopoda AMTR_s00078p00121310 R-ATR-1124037 AMTR_s00078p00121310 [mitochondrial matrix] R-ATR-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119289 Arginine degradation none Amborella trichopoda AMTR_s00078p00157800 R-ATR-5083827 AMTR_s00078p00157800 [mitochondrial matrix] R-ATR-1119319 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119319 Alanine biosynthesis III none Amborella trichopoda AMTR_s00078p00157800 R-ATR-5083827 AMTR_s00078p00157800 [mitochondrial matrix] R-ATR-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119612 Cysteine degradation none Amborella trichopoda AMTR_s00078p00158650 R-ATR-1129466 AMTR_s00078p00158650 [cytosol] R-ATR-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119449 Carotenoid biosynthesis none Amborella trichopoda AMTR_s00078p00194580 R-ATR-9920304 AMTR_s00078p00194580 [nucleoplasm] R-ATR-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8934036 Long day regulated expression of florigens none Amborella trichopoda AMTR_s00078p00194580 R-ATR-9920304 AMTR_s00078p00194580 [nucleoplasm] R-ATR-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8934108 Short day regulated expression of florigens none Amborella trichopoda AMTR_s00079p00061090 R-ATR-8987531 AMTR_s00079p00061090 [chloroplast] R-ATR-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119312 Photorespiration none Amborella trichopoda AMTR_s00079p00061090 R-ATR-1125951 AMTR_s00079p00061090 [plastid stroma] R-ATR-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119519 Calvin cycle none Amborella trichopoda AMTR_s00079p00142130 R-ATR-1126531 AMTR_s00079p00142130 [cytosol] R-ATR-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119410 Ascorbate biosynthesis none Amborella trichopoda AMTR_s00079p00142130 R-ATR-1126531 AMTR_s00079p00142130 [cytosol] R-ATR-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119628 GDP-mannose metabolism none Amborella trichopoda AMTR_s00079p00157130 R-ATR-9035785 AMTR_s00079p00157130 [nucleoplasm] R-ATR-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9035605 Regulation of seed size none Amborella trichopoda AMTR_s00079p00157130 R-ATR-9035785 AMTR_s00079p00157130 [nucleoplasm] R-ATR-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9608575 Reproductive meristem phase change none Amborella trichopoda AMTR_s00079p00191320 R-ATR-1123337 AMTR_s00079p00191320 [plastid stroma] R-ATR-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119509 Histidine biosynthesis I none Amborella trichopoda AMTR_s00080p00074790 R-ATR-9681885 AMTR_s00080p00074790 [Golgi membrane] R-ATR-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119574 UDP-L-arabinose biosynthesis and transport none Amborella trichopoda AMTR_s00080p00093010 R-ATR-1126883 AMTR_s00080p00093010 [cytosol] R-ATR-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119389 Phenylalanine biosynthesis I none Amborella trichopoda AMTR_s00080p00126880 R-ATR-1125494 AMTR_s00080p00126880 [endoplasmic reticulum membrane] R-ATR-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119402 Phospholipid biosynthesis I none Amborella trichopoda AMTR_s00080p00165150 R-ATR-5654933 AMTR_s00080p00165150 [Golgi lumen] R-ATR-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5654909 Xylan biosynthesis none Amborella trichopoda AMTR_s00081p00154850 R-ATR-8854102 AMTR_s00081p00154850 [cytosol] R-ATR-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119556 Choline biosynthesis I none Amborella trichopoda AMTR_s00081p00171100 R-ATR-1130088 AMTR_s00081p00171100 [plasma membrane] R-ATR-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119314 Cellulose biosynthesis none Amborella trichopoda AMTR_s00081p00174060 R-ATR-8933766 AMTR_s00081p00174060 [nucleoplasm] R-ATR-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8933811 Circadian rhythm none Amborella trichopoda AMTR_s00082p00120830 R-ATR-4788601 AMTR_s00082p00120830 [plastid stroma] R-ATR-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119509 Histidine biosynthesis I none Amborella trichopoda AMTR_s00083p00031040 R-ATR-8987548 AMTR_s00083p00031040 [peroxisomal matrix] R-ATR-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119312 Photorespiration none Amborella trichopoda AMTR_s00083p00043340 R-ATR-6787185 AMTR_s00083p00043340 [nucleoplasm] R-ATR-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6787011 Jasmonic acid signaling none Amborella trichopoda AMTR_s00085p00016590 R-ATR-1125569 AMTR_s00085p00016590 [cytosol] R-ATR-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119516 Trehalose biosynthesis I none Amborella trichopoda AMTR_s00085p00038660 R-ATR-1127752 AMTR_s00085p00038660 [cytosol] R-ATR-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119417 Stachyose biosynthesis none Amborella trichopoda AMTR_s00086p00087880 R-ATR-1250418 AMTR_s00086p00087880 [cytosol] R-ATR-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119374 Abscisic acid biosynthesis none Amborella trichopoda AMTR_s00086p00087880 R-ATR-1129637 AMTR_s00086p00087880 [cytosol] R-ATR-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119486 IAA biosynthesis I none Amborella trichopoda AMTR_s00086p00110220 R-ATR-1123482 AMTR_s00086p00110220 [plastid stroma] R-ATR-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119367 Polyisoprenoid biosynthesis none Amborella trichopoda AMTR_s00086p00128700 R-ATR-5655070 AMTR_s00086p00128700 [Golgi lumen] R-ATR-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5655101 Xyloglucan biosynthesis none Amborella trichopoda AMTR_s00088p00097010 R-ATR-9640729 AMTR_s00088p00097010 [nucleoplasm] R-ATR-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640760 G1 phase none Amborella trichopoda AMTR_s00088p00097010 R-ATR-9640729 AMTR_s00088p00097010 [nucleoplasm] R-ATR-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640887 G1/S transition none Amborella trichopoda AMTR_s00088p00115810 R-ATR-5138489 AMTR_s00088p00115810 [plastid stroma] R-ATR-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119263 Arginine biosynthesis none Amborella trichopoda AMTR_s00088p00115810 R-ATR-1127893 AMTR_s00088p00115810 [cytosol] R-ATR-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119444 Canavanine biosynthesis none Amborella trichopoda AMTR_s00088p00115810 R-ATR-5138489 AMTR_s00088p00115810 [plastid stroma] R-ATR-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119622 Arginine biosynthesis II (acetyl cycle) none Amborella trichopoda AMTR_s00088p00115810 R-ATR-5138489 AMTR_s00088p00115810 [plastid stroma] R-ATR-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5633340 Citrulline-nitric oxide cycle none Amborella trichopoda AMTR_s00088p00154090 R-ATR-9916125 AMTR_s00088p00154090 [nucleoplasm] R-ATR-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9916190 Root angle formation: elongation and curvature response none Amborella trichopoda AMTR_s00088p00154090 R-ATR-9916231 AMTR_s00088p00154090 [cytosol] R-ATR-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9916190 Root angle formation: elongation and curvature response none Amborella trichopoda AMTR_s00088p00154090 R-ATR-9916199 phospho-AMTR_s00088p00154090 [cytosol] R-ATR-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9916190 Root angle formation: elongation and curvature response none Amborella trichopoda AMTR_s00089p00181680 R-ATR-1127916 AMTR_s00089p00181680 [plastid stroma] R-ATR-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119367 Polyisoprenoid biosynthesis none Amborella trichopoda AMTR_s00089p00181680 R-ATR-1127916 AMTR_s00089p00181680 [plastid stroma] R-ATR-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119615 Mevalonate pathway none Amborella trichopoda AMTR_s00090p00122120 R-ATR-1122849 AMTR_s00090p00122120 [mitochondrion] R-ATR-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119506 tyrosine degradation I none Amborella trichopoda AMTR_s00090p00130390 R-ATR-5632251 AMTR_s00090p00130390 [nucleoplasm] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00091p00092100 R-ATR-9025430 AMTR_s00091p00092100 [endoplasmic reticulum membrane] R-ATR-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119325 Sphingolipid metabolism none Amborella trichopoda AMTR_s00092p00037330 R-ATR-9618186 AMTR_s00092p00037330 [plant-type vacuole membrane] R-ATR-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9618218 Arsenic uptake and detoxification none Amborella trichopoda AMTR_s00092p00055440 R-ATR-1128973-2 AMTR_s00092p00055440 [cytosol] R-ATR-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Amborella trichopoda AMTR_s00092p00055440 R-ATR-1128973-2 AMTR_s00092p00055440 [cytosol] R-ATR-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119438 Secologanin and strictosidine biosynthesis none Amborella trichopoda AMTR_s00092p00055440 R-ATR-1128973-2 AMTR_s00092p00055440 [cytosol] R-ATR-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119486 IAA biosynthesis I none Amborella trichopoda AMTR_s00092p00059730 R-ATR-1128973 AMTR_s00092p00059730 [cytosol] R-ATR-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Amborella trichopoda AMTR_s00092p00059730 R-ATR-1128973 AMTR_s00092p00059730 [cytosol] R-ATR-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119438 Secologanin and strictosidine biosynthesis none Amborella trichopoda AMTR_s00092p00059730 R-ATR-1128973 AMTR_s00092p00059730 [cytosol] R-ATR-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119486 IAA biosynthesis I none Amborella trichopoda AMTR_s00092p00062310 R-ATR-1128322 AMTR_s00092p00062310 [cytosol] R-ATR-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119384 NAD biosynthesis I (from aspartate) none Amborella trichopoda AMTR_s00092p00068370 R-ATR-1124232 AMTR_s00092p00068370 [cytosol] R-ATR-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119341 Galactosylcyclitol biosynthesis none Amborella trichopoda AMTR_s00092p00072950 R-ATR-5608169 AMTR_s00092p00072950 [nucleoplasm] R-ATR-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5608118 Auxin signalling none Amborella trichopoda AMTR_s00092p00113360 R-ATR-9826635 PCF8 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00092p00114940 R-ATR-5631953 AMTR_s00092p00114940 [mitochondrial matrix] R-ATR-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119289 Arginine degradation none Amborella trichopoda AMTR_s00092p00114940 R-ATR-1124214 AMTR_s00092p00114940 [cytosol] R-ATR-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119318 Proline biosynthesis V (from arginine) none Amborella trichopoda AMTR_s00092p00114940 R-ATR-1124214 AMTR_s00092p00114940 [cytosol] R-ATR-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119610 Biotin biosynthesis II none Amborella trichopoda AMTR_s00092p00158980 R-ATR-1124484 AMTR_s00092p00158980 [plastid stroma] R-ATR-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119519 Calvin cycle none Amborella trichopoda AMTR_s00092p00163100 R-ATR-1128624 AMTR_s00092p00163100 [mitochondrial inner membrane] R-ATR-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119479 Valine degradation none Amborella trichopoda AMTR_s00092p00167960 R-ATR-8987473 AMTR_s00092p00167960 [peroxisomal matrix] R-ATR-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119312 Photorespiration none Amborella trichopoda AMTR_s00092p00167960 R-ATR-1124984 AMTR_s00092p00167960 [cytosol] R-ATR-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119596 Glutamate biosynthesis I none Amborella trichopoda AMTR_s00092p00172590 R-ATR-5221144 AMTR_s00092p00172590 [plastid] R-ATR-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119374 Abscisic acid biosynthesis none Amborella trichopoda AMTR_s00093p00015400 R-ATR-6787202 AMTR_s00093p00015400 [cytosol] R-ATR-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6787011 Jasmonic acid signaling none Amborella trichopoda AMTR_s00093p00094570 R-ATR-1125612 AMTR_s00093p00094570 [cytosol] R-ATR-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119353 Linear furanocoumarin biosynthesis none Amborella trichopoda AMTR_s00095p00057460 R-ATR-1127373 AMTR_s00095p00057460 [cytosol] R-ATR-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119297 Beta-alanine biosynthesis III none Amborella trichopoda AMTR_s00095p00059370 R-ATR-6788172 AMTR_s00095p00059370 [nucleoplasm] R-ATR-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6788019 Salicylic acid signaling none Amborella trichopoda AMTR_s00095p00084980 R-ATR-9025819-3 AMTR_s00095p00084980 [plasma membrane] R-ATR-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9025727 Iron uptake and transport in root vascular system none Amborella trichopoda AMTR_s00095p00099600 R-ATR-9025819-2 AMTR_s00095p00099600 [plasma membrane] R-ATR-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9025727 Iron uptake and transport in root vascular system none Amborella trichopoda AMTR_s00095p00107410 R-ATR-9025819 AMTR_s00095p00107410 [plasma membrane] R-ATR-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9025727 Iron uptake and transport in root vascular system none Amborella trichopoda AMTR_s00095p00117390 R-ATR-9927865 AMTR_s00095p00117390 [nucleoplasm] R-ATR-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8934257 Transition from vegetative to reproductive shoot apical meristem none Amborella trichopoda AMTR_s00095p00135200 R-ATR-1125839 AMTR_s00095p00135200 [cytosol] R-ATR-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119386 UDP-N-acetylgalactosamine biosynthesis none Amborella trichopoda AMTR_s00096p00025660 R-ATR-1126238 AMTR_s00096p00025660 [chloroplast] R-ATR-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119494 Tryptophan biosynthesis none Amborella trichopoda AMTR_s00096p00107320 R-ATR-4752547 AMTR_s00096p00107320 [plastid stroma] R-ATR-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119498 Phylloquinone biosynthesis none Amborella trichopoda AMTR_s00096p00130150 R-ATR-1127502 AMTR_s00096p00130150 [cytosol] R-ATR-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119394 Pantothenate and coenzyme A biosynthesis III none Amborella trichopoda AMTR_s00097p00060630 R-ATR-1122832 AMTR_s00097p00060630 [plastid stroma] R-ATR-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119449 Carotenoid biosynthesis none Amborella trichopoda AMTR_s00097p00139510 R-ATR-8933788 AMTR_s00097p00139510 [nucleoplasm] R-ATR-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8933811 Circadian rhythm none Amborella trichopoda AMTR_s00099p00012720 R-ATR-9916305 AMTR_s00099p00012720 [nucleoplasm] R-ATR-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9916190 Root angle formation: elongation and curvature response none Amborella trichopoda AMTR_s00099p00127980 R-ATR-6787066-2 AMTR_s00099p00127980 [nucleoplasm] R-ATR-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6787011 Jasmonic acid signaling none Amborella trichopoda AMTR_s00099p00149450 R-ATR-1124935 AMTR_s00099p00149450 [cytosol] R-ATR-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119349 S-methylmethionine cycle none Amborella trichopoda AMTR_s00099p00152040 R-ATR-1124242 AMTR_s00099p00152040 [plastid stroma] R-ATR-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119464 Methylerythritol phosphate pathway none Amborella trichopoda AMTR_s00099p00158700 R-ATR-1127353 AMTR_s00099p00158700 [cytosol] R-ATR-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119506 tyrosine degradation I none Amborella trichopoda AMTR_s00100p00051890 R-ATR-9918210 granule-bound starch synthase 1 (GBSSI, or Waxy) [amyloplast] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00100p00051890 R-ATR-9918222 AMTR_s00100p00051890 [amyloplast] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00100p00051890 R-ATR-9626344 AMTR_s00100p00051890 [plastid stroma] R-ATR-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9626305 Regulatory network of nutrient accumulation none Amborella trichopoda AMTR_s00101p00100870 R-ATR-9916302 AMTR_s00101p00100870 [nucleoplasm] R-ATR-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8934036 Long day regulated expression of florigens none Amborella trichopoda AMTR_s00101p00100870 R-ATR-9916302 AMTR_s00101p00100870 [nucleoplasm] R-ATR-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9916190 Root angle formation: elongation and curvature response none Amborella trichopoda AMTR_s00101p00102460 R-ATR-1126996-2 AMTR_s00101p00102460 [cytosol] R-ATR-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119316 Phenylpropanoid biosynthesis none Amborella trichopoda AMTR_s00101p00149240 R-ATR-1122656 AMTR_s00101p00149240 [endosome] R-ATR-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5608118 Auxin signalling none Amborella trichopoda AMTR_s00101p00149240 R-ATR-5679312 AMTR_s00101p00149240 [plasma membrane] R-ATR-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5608118 Auxin signalling none Amborella trichopoda AMTR_s00102p00018040 R-ATR-9675845 AMTR_s00102p00018040 [nucleoplasm] R-ATR-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675782 Maturation none Amborella trichopoda AMTR_s00102p00024480 R-ATR-9826654 AMTR_s00102p00024480 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00102p00032910 R-ATR-9918273 AMTR_s00102p00032910 [amyloplast] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00102p00032910 R-ATR-9626376 AMTR_s00102p00032910 [plastid stroma] R-ATR-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9626305 Regulatory network of nutrient accumulation none Amborella trichopoda AMTR_s00102p00067140 R-ATR-1126828 AMTR_s00102p00067140 [plastid] R-ATR-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119403 Removal of superoxide radicals none Amborella trichopoda AMTR_s00103p00046860 R-ATR-1128337 AMTR_s00103p00046860 [plastid stroma] R-ATR-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119308 Momilactone biosynthesis none Amborella trichopoda AMTR_s00103p00046860 R-ATR-1128244 AMTR_s00103p00046860 [chloroplast] R-ATR-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119348 Ent-kaurene biosynthesis none Amborella trichopoda AMTR_s00103p00092610 R-ATR-1126307-2 AMTR_s00103p00092610 [cytosol] R-ATR-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119370 Sterol biosynthesis none Amborella trichopoda AMTR_s00103p00095210 R-ATR-1126307 AMTR_s00103p00095210 [cytosol] R-ATR-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119370 Sterol biosynthesis none Amborella trichopoda AMTR_s00103p00097030 R-ATR-1126307-3 AMTR_s00103p00097030 [cytosol] R-ATR-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119370 Sterol biosynthesis none Amborella trichopoda AMTR_s00103p00102630 R-ATR-1125014 AMTR_s00103p00102630 [cytosol] R-ATR-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Amborella trichopoda AMTR_s00103p00124340 R-ATR-1123087 AMTR_s00103p00124340 [plasma membrane] R-ATR-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119314 Cellulose biosynthesis none Amborella trichopoda AMTR_s00103p00133560 R-ATR-9025699 AMTR_s00103p00133560 [plasma membrane] R-ATR-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8858053 Polar auxin transport none Amborella trichopoda AMTR_s00103p00133560 R-ATR-9025699 AMTR_s00103p00133560 [plasma membrane] R-ATR-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9025727 Iron uptake and transport in root vascular system none Amborella trichopoda AMTR_s00103p00156250 R-ATR-2885386 AMTR_s00103p00156250 [cytosol] R-ATR-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119417 Stachyose biosynthesis none Amborella trichopoda AMTR_s00104p00089460 R-ATR-8854108 AMTR_s00104p00089460 [cytosol] R-ATR-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119556 Choline biosynthesis I none Amborella trichopoda AMTR_s00105p00107360 R-ATR-8868990 AMTR_s00105p00107360 [endoplasmic reticulum membrane] R-ATR-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8868949 Intracellular auxin transport none Amborella trichopoda AMTR_s00105p00113080 R-ATR-1126320 AMTR_s00105p00113080 [plastid stroma] R-ATR-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119519 Calvin cycle none Amborella trichopoda AMTR_s00106p00019920 R-ATR-1126115 AMTR_s00106p00019920 [cytosol] R-ATR-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119452 Galactose degradation II none Amborella trichopoda AMTR_s00106p00019920 R-ATR-1126115 AMTR_s00106p00019920 [cytosol] R-ATR-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119465 Sucrose biosynthesis none Amborella trichopoda AMTR_s00106p00039260 R-ATR-9918159 AMTR_s00106p00039260 [amyloplast] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00106p00082530 R-ATR-1250418-3 AMTR_s00106p00082530 [cytosol] R-ATR-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119374 Abscisic acid biosynthesis none Amborella trichopoda AMTR_s00106p00082530 R-ATR-1129637-3 AMTR_s00106p00082530 [cytosol] R-ATR-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119486 IAA biosynthesis I none Amborella trichopoda AMTR_s00106p00138610 R-ATR-5633332 AMTR_s00106p00138610 [plastid stroma] R-ATR-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5633340 Citrulline-nitric oxide cycle none Amborella trichopoda AMTR_s00106p00153400 R-ATR-1127338 AMTR_s00106p00153400 [mitochondrial inner membrane] R-ATR-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119402 Phospholipid biosynthesis I none Amborella trichopoda AMTR_s00108p00082250 R-ATR-9611863 AMTR_s00108p00082250 [mitochondrial matrix] R-ATR-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119479 Valine degradation none Amborella trichopoda AMTR_s00109p00068640 R-ATR-1125734 AMTR_s00109p00068640 [cytosol] R-ATR-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119281 Aspartate biosynthesis I none Amborella trichopoda AMTR_s00109p00068640 R-ATR-5632000 AMTR_s00109p00068640 [plastid stroma] R-ATR-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119553 Asparagine biosynthesis none Amborella trichopoda AMTR_s00109p00082150 R-ATR-5633387 AMTR_s00109p00082150 [mitochondrial matrix] R-ATR-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119445 Beta-alanine biosynthesis II none Amborella trichopoda AMTR_s00109p00083880 R-ATR-5633387-2 AMTR_s00109p00083880 [mitochondrial matrix] R-ATR-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119445 Beta-alanine biosynthesis II none Amborella trichopoda AMTR_s00109p00095870 R-ATR-9611557 RAC1 [plasma membrane] R-ATR-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9611432 Recognition of fungal and bacterial pathogens and immunity response none Amborella trichopoda AMTR_s00109p00120700 R-ATR-1128214 AMTR_s00109p00120700 [nucleoplasm] R-ATR-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5608118 Auxin signalling none Amborella trichopoda AMTR_s00109p00122730 R-ATR-5654957 AMTR_s00109p00122730 [Golgi lumen] R-ATR-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5654909 Xylan biosynthesis none Amborella trichopoda AMTR_s00109p00150460 R-ATR-1130302 AMTR_s00109p00150460 [cytosol] R-ATR-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119451 Xylose degradation none Amborella trichopoda AMTR_s00110p00073440 R-ATR-9681886 AMTR_s00110p00073440 [cytosol] R-ATR-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119574 UDP-L-arabinose biosynthesis and transport none Amborella trichopoda AMTR_s00110p00097630 R-ATR-1126421 AMTR_s00110p00097630 [cytosol] R-ATR-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119428 GDP-D-rhamnose biosynthesis none Amborella trichopoda AMTR_s00110p00097630 R-ATR-1126421 AMTR_s00110p00097630 [cytosol] R-ATR-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Amborella trichopoda AMTR_s00110p00149730 R-ATR-1128178 AMTR_s00110p00149730 [cytosol] R-ATR-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119322 Leucodelphinidin biosynthesis none Amborella trichopoda AMTR_s00110p00149730 R-ATR-1128178 AMTR_s00110p00149730 [cytosol] R-ATR-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Amborella trichopoda AMTR_s00110p00149730 R-ATR-9609575 AMTR_s00110p00149730 [endoplasmic reticulum membrane] R-ATR-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9609573 Tricin biosynthesis none Amborella trichopoda AMTR_s00111p00026410 R-ATR-5367777 AMTR_s00111p00026410 [plastid stroma] R-ATR-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5367729 Strigolactone biosynthesis none Amborella trichopoda AMTR_s00111p00027680 R-ATR-1125340 AMTR_s00111p00027680 [plastid stroma] R-ATR-1119274 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119274 Monoterpene biosynthesis none Amborella trichopoda AMTR_s00111p00027680 R-ATR-1125340 AMTR_s00111p00027680 [plastid stroma] R-ATR-1119593 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119593 Oleoresin monoterpene volatiles biosynthesis none Amborella trichopoda AMTR_s00111p00059150 R-ATR-9924407 EXPB5 [basolateral plasma membrane] R-ATR-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9924451 Shoot (tiller) formation and regulation of tiller angle none Amborella trichopoda AMTR_s00111p00071660 R-ATR-1128812-2 AMTR_s00111p00071660 [cytosol] R-ATR-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119393 Asparagine degradation I none Amborella trichopoda AMTR_s00111p00074750 R-ATR-9025447 AMTR_s00111p00074750 [cytosol] R-ATR-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119325 Sphingolipid metabolism none Amborella trichopoda AMTR_s00111p00094320 R-ATR-1124742 AMTR_s00111p00094320 [cytosol] R-ATR-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119410 Ascorbate biosynthesis none Amborella trichopoda AMTR_s00111p00094320 R-ATR-1124742 AMTR_s00111p00094320 [cytosol] R-ATR-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119570 Cytosolic glycolysis none Amborella trichopoda AMTR_s00111p00129150 R-ATR-1126053 AMTR_s00111p00129150 [mitochondrial matrix] R-ATR-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119479 Valine degradation none Amborella trichopoda AMTR_s00111p00131260 R-ATR-9608930 AMTR_s00111p00131260 [nucleoplasm] R-ATR-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8934036 Long day regulated expression of florigens none Amborella trichopoda AMTR_s00112p00098670 R-ATR-1122827 AMTR_s00112p00098670 [cytosol] R-ATR-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119334 Ethylene biosynthesis from methionine none Amborella trichopoda AMTR_s00113p00015230 R-ATR-9645954 AMTR_s00113p00015230 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00114p00051110 R-ATR-1126436 AMTR_s00114p00051110 [cytosol] R-ATR-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119615 Mevalonate pathway none Amborella trichopoda AMTR_s00114p00070400 R-ATR-9608694 AMTR_s00114p00070400 [cytosol] R-ATR-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9928831 Severe drought none Amborella trichopoda AMTR_s00114p00070400 R-ATR-9928774 AMTR_s00114p00070400 [nucleoplasm] R-ATR-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9928831 Severe drought none Amborella trichopoda AMTR_s00114p00148330 R-ATR-1127161-2 AMTR_s00114p00148330 [cytosol] R-ATR-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119486 IAA biosynthesis I none Amborella trichopoda AMTR_s00119p00026870 R-ATR-6788072 AMTR_s00119p00026870 [nucleoplasm] R-ATR-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6788019 Salicylic acid signaling none Amborella trichopoda AMTR_s00119p00040230 R-ATR-9636827 AMTR_s00119p00040230 [nucleoplasm] R-ATR-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9766881 TF network involved in salinity response none Amborella trichopoda AMTR_s00119p00045570 R-ATR-9826671 NAC77 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00119p00054040 R-ATR-9640694 AMTR_s00119p00054040 [nucleoplasm] R-ATR-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640882 Assembly of pre-replication complex none Amborella trichopoda AMTR_s00119p00054040 R-ATR-9640694 AMTR_s00119p00054040 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00119p00070320 R-ATR-9645907 AMTR_s00119p00070320 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00119p00070320 R-ATR-9645907 AMTR_s00119p00070320 [nucleoplasm] R-ATR-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675824 DNA replication Initiation none Amborella trichopoda AMTR_s00119p00100440 R-ATR-9924413 WOX6 [nucleoplasm] R-ATR-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9924451 Shoot (tiller) formation and regulation of tiller angle none Amborella trichopoda AMTR_s00119p00128340 R-ATR-1126387 AMTR_s00119p00128340 [cytosol] R-ATR-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119295 Homoserine biosynthesis none Amborella trichopoda AMTR_s00120p00105340 R-ATR-8868961 AMTR_s00120p00105340 [plant-type vacuole membrane] R-ATR-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8868949 Intracellular auxin transport none Amborella trichopoda AMTR_s00122p00077720 R-ATR-8987467 AMTR_s00122p00077720 [chloroplast] R-ATR-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119502 Allantoin degradation none Amborella trichopoda AMTR_s00122p00099920 R-ATR-1126875-2 AMTR_s00122p00099920 [cytosol] R-ATR-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119486 IAA biosynthesis I none Amborella trichopoda AMTR_s00122p00105010 R-ATR-1126875 AMTR_s00122p00105010 [cytosol] R-ATR-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119486 IAA biosynthesis I none Amborella trichopoda AMTR_s00123p00013920 R-ATR-4827040 AMTR_s00123p00013920 [plastid stroma] R-ATR-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-4827054 Tetrapyrrole biosynthesis I none Amborella trichopoda AMTR_s00126p00075040 R-ATR-1128637 AMTR_s00126p00075040 [chloroplast] R-ATR-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119494 Tryptophan biosynthesis none Amborella trichopoda AMTR_s00126p00086110 R-ATR-9640701 AMTR_s00126p00086110 [nucleoplasm] R-ATR-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640882 Assembly of pre-replication complex none Amborella trichopoda AMTR_s00126p00086110 R-ATR-9640701 AMTR_s00126p00086110 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00126p00088980 R-ATR-1124249 AMTR_s00126p00088980 [cytosol] R-ATR-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119428 GDP-D-rhamnose biosynthesis none Amborella trichopoda AMTR_s00126p00088980 R-ATR-1124249 AMTR_s00126p00088980 [cytosol] R-ATR-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Amborella trichopoda AMTR_s00127p00041670 R-ATR-9658729 AMTR_s00127p00041670 [cytosol] R-ATR-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119389 Phenylalanine biosynthesis I none Amborella trichopoda AMTR_s00127p00041670 R-ATR-9658729 AMTR_s00127p00041670 [cytosol] R-ATR-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119506 tyrosine degradation I none Amborella trichopoda AMTR_s00129p00051020 R-ATR-1129571 AMTR_s00129p00051020 [mitochondrion] R-ATR-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119365 Lysine degradation II none Amborella trichopoda AMTR_s00129p00062240 R-ATR-5654750-3 AMTR_s00129p00062240 [cytosol] R-ATR-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119393 Asparagine degradation I none Amborella trichopoda AMTR_s00129p00082230 R-ATR-6788201 AMTR_s00129p00082230 [nucleoplasm] R-ATR-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6788019 Salicylic acid signaling none Amborella trichopoda AMTR_s00130p00044000 R-ATR-6788120 AMTR_s00130p00044000 [nucleoplasm] R-ATR-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6788019 Salicylic acid signaling none Amborella trichopoda AMTR_s00130p00044000 R-ATR-6788120 AMTR_s00130p00044000 [nucleoplasm] R-ATR-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9766881 TF network involved in salinity response none Amborella trichopoda AMTR_s00130p00054840 R-ATR-9675827 AMTR_s00130p00054840 [nucleoplasm] R-ATR-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675782 Maturation none Amborella trichopoda AMTR_s00130p00054840 R-ATR-9675827 AMTR_s00130p00054840 [nucleoplasm] R-ATR-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675815 Leading strand synthesis none Amborella trichopoda AMTR_s00130p00054840 R-ATR-9675827 AMTR_s00130p00054840 [nucleoplasm] R-ATR-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675885 Lagging strand synthesis none Amborella trichopoda AMTR_s00131p00035560 R-ATR-1129055-3 AMTR_s00131p00035560 [mitochondrial matrix] R-ATR-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119533 TCA cycle (plant) none Amborella trichopoda AMTR_s00131p00119200 R-ATR-5679428 AMTR_s00131p00119200 [nucleoplasm] R-ATR-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5679411 Gibberellin signaling none Amborella trichopoda AMTR_s00131p00119200 R-ATR-5679428 AMTR_s00131p00119200 [nucleoplasm] R-ATR-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6787011 Jasmonic acid signaling none Amborella trichopoda AMTR_s00131p00119200 R-ATR-6786910 AMTR_s00131p00119200 [cytosol] R-ATR-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-6787011 Jasmonic acid signaling none Amborella trichopoda AMTR_s00132p00065700 R-ATR-9928801 AMTR_s00132p00065700 [nucleoplasm] R-ATR-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9928995 Drought escape (DE) via ABA-dependent pathway none Amborella trichopoda AMTR_s00133p00010820 R-ATR-1128054 AMTR_s00133p00010820 [mitochondrial matrix] R-ATR-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119479 Valine degradation none Amborella trichopoda AMTR_s00133p00104740 R-ATR-5632241 AMTR_s00133p00104740 [nucleoplasm] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00133p00107670 R-ATR-8986767 AMTR_s00133p00107670 [plastid] R-ATR-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8986768 Anther and pollen development none Amborella trichopoda AMTR_s00133p00111570 R-ATR-1123745 AMTR_s00133p00111570 [endoplasmic reticulum membrane] R-ATR-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119260 Cardiolipin biosynthesis none Amborella trichopoda AMTR_s00133p00111570 R-ATR-1123745 AMTR_s00133p00111570 [endoplasmic reticulum membrane] R-ATR-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119402 Phospholipid biosynthesis I none Amborella trichopoda AMTR_s00135p00052570 R-ATR-2960195 AMTR_s00135p00052570 [cytosol] R-ATR-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119410 Ascorbate biosynthesis none Amborella trichopoda AMTR_s00135p00052570 R-ATR-2960195 AMTR_s00135p00052570 [cytosol] R-ATR-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119570 Cytosolic glycolysis none Amborella trichopoda AMTR_s00135p00062550 R-ATR-5632192 AMTR_s00135p00062550 [cytosol] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00135p00066200 R-ATR-9640777 AMTR_s00135p00066200 [nucleoplasm] R-ATR-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640760 G1 phase none Amborella trichopoda AMTR_s00135p00066200 R-ATR-9640777 AMTR_s00135p00066200 [nucleoplasm] R-ATR-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640887 G1/S transition none Amborella trichopoda AMTR_s00135p00077960 R-ATR-1124490 AMTR_s00135p00077960 [cytosol] R-ATR-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119534 Pyridoxal 5'-phosphate salvage pathway none Amborella trichopoda AMTR_s00135p00077960 R-ATR-1124490 AMTR_s00135p00077960 [cytosol] R-ATR-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119594 Pyridoxal 5'-phosphate biosynthesis none Amborella trichopoda AMTR_s00135p00080850 R-ATR-5608140 AMTR_s00135p00080850 [nucleoplasm] R-ATR-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5608118 Auxin signalling none Amborella trichopoda AMTR_s00137p00018220 R-ATR-1123210 AMTR_s00137p00018220 [cytosol] R-ATR-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119516 Trehalose biosynthesis I none Amborella trichopoda AMTR_s00137p00043990 R-ATR-1124334 AMTR_s00137p00043990 [plasma membrane] R-ATR-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119314 Cellulose biosynthesis none Amborella trichopoda AMTR_s00137p00092920 R-ATR-8933816 AMTR_s00137p00092920 [nucleoplasm] R-ATR-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8933811 Circadian rhythm none Amborella trichopoda AMTR_s00137p00104280 R-ATR-8879027 AMTR_s00137p00104280 [nucleoplasm] R-ATR-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8879007 Response to cold temperature none Amborella trichopoda AMTR_s00141p00107890 R-ATR-4415060 AMTR_s00141p00107890 [plasma membrane] R-ATR-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-3899351 Abscisic acid (ABA) mediated signaling none Amborella trichopoda AMTR_s00141p00107890 R-ATR-4415065 phospho-AMTR_s00141p00107890 [plasma membrane] R-ATR-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-3899351 Abscisic acid (ABA) mediated signaling none Amborella trichopoda AMTR_s00143p00107110 R-ATR-1123819 AMTR_s00143p00107110 [plastid stroma] R-ATR-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119464 Methylerythritol phosphate pathway none Amborella trichopoda AMTR_s00145p00064330 R-ATR-1126172 AMTR_s00145p00064330 [cytosol] R-ATR-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119379 Flavin biosynthesis none Amborella trichopoda AMTR_s00145p00098450 R-ATR-9826691 AMTR_s00145p00098450 [nucleoplasm] R-ATR-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Amborella trichopoda AMTR_s00146p00037590 R-ATR-5632120 AMTR_s00146p00037590 [nucleoplasm] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00146p00044900 R-ATR-1130059 AMTR_s00146p00044900 [cytosol] R-ATR-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119262 Threonine biosynthesis from homoserine none Amborella trichopoda AMTR_s00146p00095280 R-ATR-4415101 AMTR_s00146p00095280 [cytosol] R-ATR-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-3899351 Abscisic acid (ABA) mediated signaling none Amborella trichopoda AMTR_s00146p00095280 R-ATR-4415101 AMTR_s00146p00095280 [cytosol] R-ATR-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9639861 Development of root hair none Amborella trichopoda AMTR_s00147p00079450 R-ATR-9640783 AMTR_s00147p00079450 [nucleoplasm] R-ATR-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640760 G1 phase none Amborella trichopoda AMTR_s00147p00094600 R-ATR-1123534 AMTR_s00147p00094600 [cytosol] R-ATR-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119438 Secologanin and strictosidine biosynthesis none Amborella trichopoda AMTR_s00147p00099160 R-ATR-5084918 AMTR_s00147p00099160 [cytosol] R-ATR-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119624 Methionine salvage pathway none Amborella trichopoda AMTR_s00148p00023270 R-ATR-9618056 AMTR_s00148p00023270 [plasma membrane] R-ATR-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9618218 Arsenic uptake and detoxification none Amborella trichopoda AMTR_s00148p00044300 R-ATR-9918201 AMTR_s00148p00044300 [amyloplast] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00148p00046020 R-ATR-5608161 AMTR_s00148p00046020 [nucleoplasm] R-ATR-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5608118 Auxin signalling none Amborella trichopoda AMTR_s00148p00088930 R-ATR-1130235 AMTR_s00148p00088930 [cytosol] R-ATR-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119261 Salicylate biosynthesis none Amborella trichopoda AMTR_s00148p00088930 R-ATR-1130235 AMTR_s00148p00088930 [cytosol] R-ATR-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119418 Suberin biosynthesis none Amborella trichopoda AMTR_s00148p00088930 R-ATR-1130235 AMTR_s00148p00088930 [cytosol] R-ATR-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119582 Phenylpropanoid biosynthesis, initial reactions none Amborella trichopoda AMTR_s00148p00098440 R-ATR-8933738 AMTR_s00148p00098440 [nucleoplasm] R-ATR-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8933811 Circadian rhythm none Amborella trichopoda AMTR_s00149p00042870 R-ATR-1124520 AMTR_s00149p00042870 [cytosol] R-ATR-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119278 PRPP biosynthesis I none Amborella trichopoda AMTR_s00149p00051550 R-ATR-5632319 phospho-AMTR_s00149p00051550 [plasma membrane] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00149p00053760 R-ATR-1125766 AMTR_s00149p00053760 [cytosol] R-ATR-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119557 GA12 biosynthesis none Amborella trichopoda AMTR_s00149p00054540 R-ATR-8987554 AMTR_s00149p00054540 [mitochondrial matrix] R-ATR-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119312 Photorespiration none Amborella trichopoda AMTR_s00149p00082270 R-ATR-9025230 AMTR_s00149p00082270 [peroxisomal matrix] R-ATR-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119407 Ureide biosynthesis none Amborella trichopoda AMTR_s00149p00098120 R-ATR-5138481 AMTR_s00149p00098120 [plastid stroma] R-ATR-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119263 Arginine biosynthesis none Amborella trichopoda AMTR_s00149p00098120 R-ATR-5138481 AMTR_s00149p00098120 [plastid stroma] R-ATR-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119539 Ornithine biosynthesis none Amborella trichopoda AMTR_s00152p00020750 R-ATR-5679324 AMTR_s00152p00020750 [cytosol] R-ATR-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5608118 Auxin signalling none Amborella trichopoda AMTR_s00152p00041700 R-ATR-9618112 AMTR_s00152p00041700 [plasma membrane] R-ATR-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9618218 Arsenic uptake and detoxification none Amborella trichopoda AMTR_s00152p00085890 R-ATR-8987448 AMTR_s00152p00085890 [peroxisomal matrix] R-ATR-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119312 Photorespiration none Amborella trichopoda AMTR_s00154p00046110 R-ATR-9645944 AMTR_s00154p00046110 [nucleoplasm] R-ATR-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9645850 Activation of pre-replication complex none Amborella trichopoda AMTR_s00154p00049600 R-ATR-1125974-2 AMTR_s00154p00049600 [cytosol] R-ATR-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119262 Threonine biosynthesis from homoserine none Amborella trichopoda AMTR_s00154p00049600 R-ATR-1125974-2 AMTR_s00154p00049600 [cytosol] R-ATR-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119400 Methionine biosynthesis II none Amborella trichopoda AMTR_s00155p00014230 R-ATR-1130348 AMTR_s00155p00014230 [cytosol] R-ATR-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Amborella trichopoda AMTR_s00155p00032400 R-ATR-1129564 AMTR_s00155p00032400 [cytosol] R-ATR-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119428 GDP-D-rhamnose biosynthesis none Amborella trichopoda AMTR_s00155p00032400 R-ATR-1125489 AMTR_s00155p00032400 [Golgi membrane] R-ATR-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119574 UDP-L-arabinose biosynthesis and transport none Amborella trichopoda AMTR_s00155p00032400 R-ATR-1129564 AMTR_s00155p00032400 [cytosol] R-ATR-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Amborella trichopoda AMTR_s00155p00061840 R-ATR-9618056-2 AMTR_s00155p00061840 [plasma membrane] R-ATR-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9618218 Arsenic uptake and detoxification none Amborella trichopoda AMTR_s00156p00017490 R-ATR-9626449 AMTR_s00156p00017490 [cytosol] R-ATR-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9626305 Regulatory network of nutrient accumulation none Amborella trichopoda AMTR_s00156p00023720 R-ATR-1128319 AMTR_s00156p00023720 [cytosol] R-ATR-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119341 Galactosylcyclitol biosynthesis none Amborella trichopoda AMTR_s00156p00067780 R-ATR-9918267 ISA2 [amyloplast] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00156p00089110 R-ATR-1129111 AMTR_s00156p00089110 [cytosol] R-ATR-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119349 S-methylmethionine cycle none Amborella trichopoda AMTR_s00156p00089110 R-ATR-1129111 AMTR_s00156p00089110 [cytosol] R-ATR-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119400 Methionine biosynthesis II none Amborella trichopoda AMTR_s00157p00092470 R-ATR-1130210 AMTR_s00157p00092470 [cytosol] R-ATR-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119586 Cyanate degradation none Amborella trichopoda AMTR_s00159p00023000 R-ATR-1123059 AMTR_s00159p00023000 [cytosol] R-ATR-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119317 Spermine biosynthesis none Amborella trichopoda AMTR_s00159p00023000 R-ATR-1123059 AMTR_s00159p00023000 [cytosol] R-ATR-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119343 Spermidine biosynthesis none Amborella trichopoda AMTR_s00161p00025880 R-ATR-1125631 AMTR_s00161p00025880 [cytosol] R-ATR-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119321 Glycerol degradation I none Amborella trichopoda AMTR_s00161p00047190 R-ATR-9640723 AMTR_s00161p00047190 [nucleoplasm] R-ATR-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640887 G1/S transition none Amborella trichopoda AMTR_s00164p00017630 R-ATR-5654859 AMTR_s00164p00017630 [nucleoplasm] R-ATR-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5654828 Strigolactone signaling none Amborella trichopoda AMTR_s00164p00017630 R-ATR-5654859 AMTR_s00164p00017630 [nucleoplasm] R-ATR-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Amborella trichopoda AMTR_s00165p00011470 R-ATR-1128606 AMTR_s00165p00011470 [mitochondrial matrix] R-ATR-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119365 Lysine degradation II none Amborella trichopoda AMTR_s00165p00011470 R-ATR-1173244 AMTR_s00165p00011470 [mitochondrial matrix] R-ATR-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119533 TCA cycle (plant) none Amborella trichopoda AMTR_s00165p00024090 R-ATR-1123470 AMTR_s00165p00024090 [cytosol] R-ATR-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119292 Cytokinins 7-N-glucoside biosynthesis none Amborella trichopoda AMTR_s00165p00024090 R-ATR-1123470 AMTR_s00165p00024090 [cytosol] R-ATR-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119375 Cytokinins 9-N-glucoside biosynthesis none Amborella trichopoda AMTR_s00165p00024090 R-ATR-1123470 AMTR_s00165p00024090 [cytosol] R-ATR-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119473 Cytokinins-O-glucoside biosynthesis none Amborella trichopoda AMTR_s00165p00025190 R-ATR-1123470-2 AMTR_s00165p00025190 [cytosol] R-ATR-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119292 Cytokinins 7-N-glucoside biosynthesis none Amborella trichopoda AMTR_s00165p00025190 R-ATR-1123470-2 AMTR_s00165p00025190 [cytosol] R-ATR-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119375 Cytokinins 9-N-glucoside biosynthesis none Amborella trichopoda AMTR_s00165p00025190 R-ATR-1123470-2 AMTR_s00165p00025190 [cytosol] R-ATR-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119473 Cytokinins-O-glucoside biosynthesis none Amborella trichopoda AMTR_s00165p00026750 R-ATR-1128131 AMTR_s00165p00026750 [cytosol] R-ATR-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119473 Cytokinins-O-glucoside biosynthesis none Amborella trichopoda AMTR_s00165p00028990 R-ATR-1125098 AMTR_s00165p00028990 [cytosol] R-ATR-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119473 Cytokinins-O-glucoside biosynthesis none Amborella trichopoda AMTR_s00165p00031780 R-ATR-1123751 AMTR_s00165p00031780 [cytosol] R-ATR-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119292 Cytokinins 7-N-glucoside biosynthesis none Amborella trichopoda AMTR_s00165p00031780 R-ATR-1123751 AMTR_s00165p00031780 [cytosol] R-ATR-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119375 Cytokinins 9-N-glucoside biosynthesis none Amborella trichopoda AMTR_s00165p00031780 R-ATR-1123751 AMTR_s00165p00031780 [cytosol] R-ATR-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119473 Cytokinins-O-glucoside biosynthesis none Amborella trichopoda AMTR_s00165p00046130 R-ATR-9675849 AMTR_s00165p00046130 [nucleoplasm] R-ATR-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675824 DNA replication Initiation none Amborella trichopoda AMTR_s00168p00017970 R-ATR-9025513 AMTR_s00168p00017970 [endoplasmic reticulum membrane] R-ATR-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119325 Sphingolipid metabolism none Amborella trichopoda AMTR_s00168p00017970 R-ATR-1129700 AMTR_s00168p00017970 [cytosol] R-ATR-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119610 Biotin biosynthesis II none Amborella trichopoda AMTR_s00168p00055310 R-ATR-1129818 AMTR_s00168p00055310 [mitochondrial matrix] R-ATR-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119365 Lysine degradation II none Amborella trichopoda AMTR_s00168p00055310 R-ATR-1173242 AMTR_s00168p00055310 [mitochondrial matrix] R-ATR-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119533 TCA cycle (plant) none Amborella trichopoda AMTR_s00169p00051950 R-ATR-5632264-2 AMTR_s00169p00051950 [nucleoplasm] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00169p00059790 R-ATR-5138500 AMTR_s00169p00059790 [plastid stroma] R-ATR-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119263 Arginine biosynthesis none Amborella trichopoda AMTR_s00169p00059790 R-ATR-1129397 AMTR_s00169p00059790 [cytosol] R-ATR-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119273 Lysine biosynthesis I none Amborella trichopoda AMTR_s00169p00059790 R-ATR-1129397 AMTR_s00169p00059790 [cytosol] R-ATR-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119283 Lysine biosynthesis II none Amborella trichopoda AMTR_s00169p00059790 R-ATR-1129397 AMTR_s00169p00059790 [cytosol] R-ATR-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119295 Homoserine biosynthesis none Amborella trichopoda AMTR_s00169p00059790 R-ATR-5138500 AMTR_s00169p00059790 [plastid stroma] R-ATR-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119539 Ornithine biosynthesis none Amborella trichopoda AMTR_s00169p00059790 R-ATR-5138500 AMTR_s00169p00059790 [plastid stroma] R-ATR-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119622 Arginine biosynthesis II (acetyl cycle) none Amborella trichopoda AMTR_s00170p00012630 R-ATR-1124491 AMTR_s00170p00012630 [plasma membrane] R-ATR-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119314 Cellulose biosynthesis none Amborella trichopoda AMTR_s00170p00028260 R-ATR-5632139 AMTR_s00170p00028260 [nucleoplasm] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00170p00032930 R-ATR-1127442 AMTR_s00170p00032930 [cytosol] R-ATR-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119281 Aspartate biosynthesis I none Amborella trichopoda AMTR_s00170p00032930 R-ATR-5632001 AMTR_s00170p00032930 [plastid stroma] R-ATR-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119553 Asparagine biosynthesis none Amborella trichopoda AMTR_s00170p00050820 R-ATR-1123733 AMTR_s00170p00050820 [cytosol] R-ATR-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119484 Folate polyglutamylation II none Amborella trichopoda AMTR_s00170p00061300 R-ATR-5632315 AMTR_s00170p00061300 [nucleoplasm] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00170p00061300 R-ATR-5632284 phospho-AMTR_s00170p00061300 [nucleoplasm] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00170p00061300 R-ATR-5632342 phospho-AMTR_s00170p00061300 [cytosol] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00170p00061300 R-ATR-5632315 AMTR_s00170p00061300 [nucleoplasm] R-ATR-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5679411 Gibberellin signaling none Amborella trichopoda AMTR_s00171p00056620 R-ATR-5632121 AMTR_s00171p00056620 [nucleoplasm] R-ATR-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5632095 Brassinosteroid signaling none Amborella trichopoda AMTR_s00174p00061480 R-ATR-1127151 AMTR_s00174p00061480 [cytosol] R-ATR-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119384 NAD biosynthesis I (from aspartate) none Amborella trichopoda AMTR_s00175p00042660 R-ATR-8879040 AMTR_s00175p00042660 [nucleoplasm] R-ATR-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-8879007 Response to cold temperature none Amborella trichopoda AMTR_s00175p00047170 R-ATR-1130456 AMTR_s00175p00047170 [plastid stroma] R-ATR-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119430 Chorismate biosynthesis none Amborella trichopoda AMTR_s00175p00057810 R-ATR-1124778 AMTR_s00175p00057810 [plastid stroma] R-ATR-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119464 Methylerythritol phosphate pathway none Amborella trichopoda AMTR_s00176p00027530 R-ATR-9658702 AMTR_s00176p00027530 [plastid stroma] R-ATR-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119297 Beta-alanine biosynthesis III none Amborella trichopoda AMTR_s00176p00032980 R-ATR-1128804 AMTR_s00176p00032980 [cytosol] R-ATR-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119516 Trehalose biosynthesis I none Amborella trichopoda AMTR_s00177p00010960 R-ATR-1125698 AMTR_s00177p00010960 [cytosol] R-ATR-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119436 Peptidoglycan biosynthesis I none Amborella trichopoda AMTR_s00177p00046490 R-ATR-1122785-2 AMTR_s00177p00046490 [cytosol] R-ATR-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119273 Lysine biosynthesis I none Amborella trichopoda AMTR_s00177p00046490 R-ATR-1126726-2 AMTR_s00177p00046490 [cytosol] R-ATR-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119273 Lysine biosynthesis I none Amborella trichopoda AMTR_s00177p00046490 R-ATR-1122785-2 AMTR_s00177p00046490 [cytosol] R-ATR-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119283 Lysine biosynthesis II none Amborella trichopoda AMTR_s00177p00046490 R-ATR-1126726-2 AMTR_s00177p00046490 [cytosol] R-ATR-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119283 Lysine biosynthesis II none Amborella trichopoda AMTR_s00177p00046490 R-ATR-1122785-2 AMTR_s00177p00046490 [cytosol] R-ATR-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119570 Cytosolic glycolysis none Amborella trichopoda AMTR_s00177p00046770 R-ATR-1122785-3 AMTR_s00177p00046770 [cytosol] R-ATR-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119273 Lysine biosynthesis I none Amborella trichopoda AMTR_s00177p00046770 R-ATR-1126726 AMTR_s00177p00046770 [cytosol] R-ATR-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119273 Lysine biosynthesis I none Amborella trichopoda AMTR_s00177p00046770 R-ATR-1122785-3 AMTR_s00177p00046770 [cytosol] R-ATR-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119283 Lysine biosynthesis II none Amborella trichopoda AMTR_s00177p00046770 R-ATR-1126726 AMTR_s00177p00046770 [cytosol] R-ATR-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119283 Lysine biosynthesis II none Amborella trichopoda AMTR_s00177p00046770 R-ATR-1122785-3 AMTR_s00177p00046770 [cytosol] R-ATR-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119570 Cytosolic glycolysis none Amborella trichopoda AMTR_s00177p00047570 R-ATR-1122785 AMTR_s00177p00047570 [cytosol] R-ATR-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119273 Lysine biosynthesis I none Amborella trichopoda AMTR_s00177p00047570 R-ATR-1126726-3 AMTR_s00177p00047570 [cytosol] R-ATR-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119273 Lysine biosynthesis I none Amborella trichopoda AMTR_s00177p00047570 R-ATR-1122785 AMTR_s00177p00047570 [cytosol] R-ATR-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119283 Lysine biosynthesis II none Amborella trichopoda AMTR_s00177p00047570 R-ATR-1126726-3 AMTR_s00177p00047570 [cytosol] R-ATR-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119283 Lysine biosynthesis II none Amborella trichopoda AMTR_s00177p00047570 R-ATR-1122785 AMTR_s00177p00047570 [cytosol] R-ATR-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119570 Cytosolic glycolysis none Amborella trichopoda AMTR_s00180p00043090 R-ATR-1125447 AMTR_s00180p00043090 [plastid stroma] R-ATR-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119509 Histidine biosynthesis I none Amborella trichopoda AMTR_s00182p00010830 R-ATR-1125093 AMTR_s00182p00010830 [cytosol] R-ATR-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119456 Brassinosteroid biosynthesis II none Amborella trichopoda AMTR_s00182p00026140 R-ATR-1123832 AMTR_s00182p00026140 [cytosol] R-ATR-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119304 Putrescine biosynthesis II none Amborella trichopoda AMTR_s00182p00026140 R-ATR-1123832 AMTR_s00182p00026140 [cytosol] R-ATR-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119447 Putrescine biosynthesis I none Amborella trichopoda AMTR_s00183p00024730 R-ATR-9638996 AMTR_s00183p00024730 [cytosol] R-ATR-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119434 Phytic acid biosynthesis (lipid-independent) none Amborella trichopoda AMTR_s00183p00050040 R-ATR-1129390 AMTR_s00183p00050040 [mitochondrion] R-ATR-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119506 tyrosine degradation I none Amborella trichopoda AMTR_s00185p00036890 R-ATR-1129282 AMTR_s00185p00036890 [cytosol] R-ATR-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119428 GDP-D-rhamnose biosynthesis none Amborella trichopoda AMTR_s00185p00036890 R-ATR-1129282 AMTR_s00185p00036890 [cytosol] R-ATR-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Amborella trichopoda AMTR_s00189p00041140 R-ATR-1129175 AMTR_s00189p00041140 [amyloplast] R-ATR-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119477 Starch biosynthesis none Amborella trichopoda AMTR_s00197p00041400 R-ATR-5679398 AMTR_s00197p00041400 [cytosol] R-ATR-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5679411 Gibberellin signaling none Amborella trichopoda AMTR_s00199p00017510 R-ATR-1123465-2 AMTR_s00199p00017510 [plastid stroma] R-ATR-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119424 Plastid glycolysis none Amborella trichopoda AMTR_s00199p00017510 R-ATR-5633368-2 AMTR_s00199p00017510 [cytosol] R-ATR-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119601 Trehalose degradation II none Amborella trichopoda AMTR_s00199p00036120 R-ATR-9675860 AMTR_s00199p00036120 [nucleoplasm] R-ATR-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675824 DNA replication Initiation none Amborella trichopoda AMTR_s00200p00032090 R-ATR-5608174 AMTR_s00200p00032090 [nucleoplasm] R-ATR-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5608118 Auxin signalling none Amborella trichopoda AMTR_s00202p00012570 R-ATR-9675877 AMTR_s00202p00012570 [nucleoplasm] R-ATR-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9675815 Leading strand synthesis none Amborella trichopoda AMTR_s00202p00022860 R-ATR-3240749 AMTR_s00202p00022860 [cytosol] R-ATR-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Amborella trichopoda AMTR_s00202p00022860 R-ATR-9681918 AMTR_s00202p00022860 [cytosol] R-ATR-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119574 UDP-L-arabinose biosynthesis and transport none Amborella trichopoda AMTR_s00203p00024670 R-ATR-9025739 AMTR_s00203p00024670 [plasma membrane] R-ATR-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9025727 Iron uptake and transport in root vascular system none Amborella trichopoda AMTR_s00203p00024670 R-ATR-9025739 AMTR_s00203p00024670 [plasma membrane] R-ATR-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9618218 Arsenic uptake and detoxification none Amborella trichopoda AMTR_s00203p00024670 R-ATR-9025739 AMTR_s00203p00024670 [plasma membrane] R-ATR-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9639136 Response to Aluminum stress none Amborella trichopoda AMTR_s00204p00036990 R-ATR-1126344 AMTR_s00204p00036990 [plastid stroma] R-ATR-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119529 Sulfate activation for sulfonation none Amborella trichopoda AMTR_s00211p00025860 R-ATR-5608137 AMTR_s00211p00025860 [nucleoplasm] R-ATR-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-5608118 Auxin signalling none Amborella trichopoda AMTR_s00218p00027210 R-ATR-1124809 AMTR_s00218p00027210 [cytosol] R-ATR-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119486 IAA biosynthesis I none Amborella trichopoda AMTR_s00224p00024190 R-ATR-9608693 AMTR_s00224p00024190 [cytosol] R-ATR-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9608575 Reproductive meristem phase change none Amborella trichopoda AMTR_s00239p00021140 R-ATR-1128798 AMTR_s00239p00021140 [cytosol] R-ATR-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119331 Cysteine biosynthesis I none Amborella trichopoda AMTR_s00245p00019130 R-ATR-1126344-2 AMTR_s00245p00019130 [plastid stroma] R-ATR-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119529 Sulfate activation for sulfonation none Amborella trichopoda AMTR_s00254p00018780 R-ATR-1123465 AMTR_s00254p00018780 [plastid stroma] R-ATR-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119424 Plastid glycolysis none Amborella trichopoda AMTR_s00254p00018780 R-ATR-5633368 AMTR_s00254p00018780 [cytosol] R-ATR-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119601 Trehalose degradation II none Amborella trichopoda AMTR_s00361p00012090 R-ATR-1123561 AMTR_s00361p00012090 [cytosol] R-ATR-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119624 Methionine salvage pathway none Amborella trichopoda AMTR_s00362p00012770 R-ATR-1123561-2 AMTR_s00362p00012770 [cytosol] R-ATR-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119624 Methionine salvage pathway none Amborella trichopoda AMTR_s00449p00011300 R-ATR-1129282-2 AMTR_s00449p00011300 [cytosol] R-ATR-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119428 GDP-D-rhamnose biosynthesis none Amborella trichopoda AMTR_s00449p00011300 R-ATR-1129282-2 AMTR_s00449p00011300 [cytosol] R-ATR-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Amborella trichopoda AMTR_s00727p00010990 R-ATR-1128431 AMTR_s00727p00010990 [cytosol] R-ATR-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-1119316 Phenylpropanoid biosynthesis none Amborella trichopoda AMTR_s01065p00004230 R-ATR-9608693-2 AMTR_s01065p00004230 [cytosol] R-ATR-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9608575 Reproductive meristem phase change none Amborella trichopoda AMTR_s01954p00002310 R-ATR-9640789 AMTR_s01954p00002310 [nucleoplasm] R-ATR-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATR-9640760 G1 phase none Amborella trichopoda AT1G01060 R-ATH-8933759 AT1G01060 [nucleoplasm] R-ATH-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8933811 Circadian rhythm none Arabidopsis thaliana AT1G01260 R-ATH-6787066 AT1G01260 [nucleoplasm] R-ATH-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6787011 Jasmonic acid signaling none Arabidopsis thaliana AT1G01480 R-ATH-1129892 AT1G01480 [cytosol] R-ATH-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119334 Ethylene biosynthesis from methionine none Arabidopsis thaliana AT1G01480 R-ATH-1129892 AT1G01480 [cytosol] R-ATH-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119624 Methionine salvage pathway none Arabidopsis thaliana AT1G01720 R-ATH-9930308 SNAC2 (OsNAC6) [nucleoplasm] R-ATH-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9766881 TF network involved in salinity response none Arabidopsis thaliana AT1G02000 R-ATH-1126421-2 AT1G02000 [cytosol] R-ATH-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis thaliana AT1G02000 R-ATH-1126421-2 AT1G02000 [cytosol] R-ATH-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis thaliana AT1G02500 R-ATH-1128366-2 AT1G02500 [cytosol] R-ATH-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119334 Ethylene biosynthesis from methionine none Arabidopsis thaliana AT1G02500 R-ATH-1128366-2 AT1G02500 [cytosol] R-ATH-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119501 S-adenosyl-L-methionine cycle none Arabidopsis thaliana AT1G02500 R-ATH-1128366-2 AT1G02500 [cytosol] R-ATH-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119624 Methionine salvage pathway none Arabidopsis thaliana AT1G02500 R-ATH-9025738-2 AT1G02500 [cytosol] R-ATH-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9025754 Mugineic acid biosynthesis none Arabidopsis thaliana AT1G02730 R-ATH-1123894 AT1G02730 [plasma membrane] R-ATH-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119314 Cellulose biosynthesis none Arabidopsis thaliana AT1G03055 R-ATH-5679502 AT1G03055 [plastid stroma] R-ATH-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5367729 Strigolactone biosynthesis none Arabidopsis thaliana AT1G03310 R-ATH-9918267 ISA2 [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT1G03960 R-ATH-5632268 AT1G03960 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G03970 R-ATH-9928771 AT1G03970 [nucleoplasm] R-ATH-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9928831 Severe drought none Arabidopsis thaliana AT1G04100 R-ATH-1128385-2 AT1G04100 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT1G04250 R-ATH-1122892-2 AT1G04250 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT1G04250 R-ATH-1122892-2 AT1G04250 [nucleoplasm] R-ATH-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030557 Lateral root initiation none Arabidopsis thaliana AT1G04250 R-ATH-1122892-2 AT1G04250 [nucleoplasm] R-ATH-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030654 Primary root development none Arabidopsis thaliana AT1G04310 R-ATH-5225766-2 AT1G04310 [nucleoplasm] R-ATH-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5225756 Ethylene mediated signaling none Arabidopsis thaliana AT1G04400 R-ATH-8933738 AT1G04400 [nucleoplasm] R-ATH-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8933811 Circadian rhythm none Arabidopsis thaliana AT1G04550 R-ATH-1128385-4 AT1G04550 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT1G04580 R-ATH-1250418-3 AT1G04580 [cytosol] R-ATH-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119374 Abscisic acid biosynthesis none Arabidopsis thaliana AT1G04580 R-ATH-1129637 AT1G04580 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT1G04920 R-ATH-1124348 AT1G04920 [cytosol] R-ATH-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119465 Sucrose biosynthesis none Arabidopsis thaliana AT1G05010 R-ATH-1122827 AT1G05010 [cytosol] R-ATH-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119334 Ethylene biosynthesis from methionine none Arabidopsis thaliana AT1G05160 R-ATH-1125766-2 AT1G05160 [cytosol] R-ATH-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119557 GA12 biosynthesis none Arabidopsis thaliana AT1G05830 R-ATH-9927723-2 AT1G05830 [nucleoplasm] R-ATH-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934036 Long day regulated expression of florigens none Arabidopsis thaliana AT1G05960 R-ATH-9675297 AT1G05960 [mitochondrion] R-ATH-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030654 Primary root development none Arabidopsis thaliana AT1G06390 R-ATH-5632139 AT1G06390 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G06570 R-ATH-1128974 AT1G06570 [cytosol] R-ATH-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119287 Vitamin E biosynthesis none Arabidopsis thaliana AT1G06570 R-ATH-1128974 AT1G06570 [cytosol] R-ATH-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119506 tyrosine degradation I none Arabidopsis thaliana AT1G07200 R-ATH-5654797 AT1G07200 [nucleoplasm] R-ATH-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5654828 Strigolactone signaling none Arabidopsis thaliana AT1G07270 R-ATH-9640886-2 AT1G07270 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT1G07370 R-ATH-9640689 AT1G07370 [nucleoplasm] R-ATH-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675782 Maturation none Arabidopsis thaliana AT1G07370 R-ATH-9640689 AT1G07370 [nucleoplasm] R-ATH-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675815 Leading strand synthesis none Arabidopsis thaliana AT1G07370 R-ATH-9640689 AT1G07370 [nucleoplasm] R-ATH-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675885 Lagging strand synthesis none Arabidopsis thaliana AT1G07420 R-ATH-1127539 AT1G07420 [cytosol] R-ATH-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Arabidopsis thaliana AT1G07420 R-ATH-1127539 AT1G07420 [cytosol] R-ATH-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119439 Cholesterol biosynthesis III (via desmosterol) none Arabidopsis thaliana AT1G07420 R-ATH-1127539 AT1G07420 [cytosol] R-ATH-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119559 Cholesterol biosynthesis I none Arabidopsis thaliana AT1G07430 R-ATH-4415078-2 AT1G07430 [cytosol] R-ATH-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis thaliana AT1G07570 R-ATH-9611528-2 RLCK176 [cytosol] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT1G07570 R-ATH-9611477-2 phospho-phosphorylated-RLCK176 [cytosol] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT1G07780 R-ATH-1129723 AT1G07780 [chloroplast] R-ATH-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119494 Tryptophan biosynthesis none Arabidopsis thaliana AT1G08130 R-ATH-9675845-2 AT1G08130 [nucleoplasm] R-ATH-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675782 Maturation none Arabidopsis thaliana AT1G08200 R-ATH-1124560 AT1G08200 [cytosol] R-ATH-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119563 UDP-D-xylose biosynthesis none Arabidopsis thaliana AT1G08200 R-ATH-9681903 AT1G08200 [Golgi lumen] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT1G08200 R-ATH-1124560 AT1G08200 [cytosol] R-ATH-5654894 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5654894 UDP-D-apiose biosynthesis none Arabidopsis thaliana AT1G08320 R-ATH-6787863 AT1G08320 [nucleoplasm] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT1G08420 R-ATH-5632111 AT1G08420 [cytosol] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G08420 R-ATH-5632216 phospho-AT1G08420 [cytosol] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G08420 R-ATH-5632145 phospho-AT1G08420 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G08465 R-ATH-9826669 OsYABBY6 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT1G08470 R-ATH-1126604-2 AT1G08470 [cytosol] R-ATH-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119438 Secologanin and strictosidine biosynthesis none Arabidopsis thaliana AT1G08490 R-ATH-1128087 AT1G08490 [plastid stroma] R-ATH-1119319 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119319 Alanine biosynthesis III none Arabidopsis thaliana AT1G08630 R-ATH-1128298-2 AT1G08630 [cytosol] R-ATH-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119271 Threonine degradation none Arabidopsis thaliana AT1G08630 R-ATH-1128298-2 AT1G08630 [cytosol] R-ATH-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119610 Biotin biosynthesis II none Arabidopsis thaliana AT1G08830 R-ATH-1124206 AT1G08830 [cytosol] R-ATH-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119403 Removal of superoxide radicals none Arabidopsis thaliana AT1G08830 R-ATH-1124206 AT1G08830 [cytosol] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT1G08840 R-ATH-9675878 AT1G08840 [nucleoplasm] R-ATH-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675782 Maturation none Arabidopsis thaliana AT1G08980 R-ATH-1127599 AT1G08980 [cytosol] R-ATH-1119388 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119388 IAA biosynthesis VI (via indole-3-acetamide) none Arabidopsis thaliana AT1G09090 R-ATH-9607149 AT1G09090 [plasma membrane] R-ATH-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9607185 Generation of superoxide radicals none Arabidopsis thaliana AT1G09090 R-ATH-9607094 phospho-AT1G09090 [plasma membrane] R-ATH-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9607185 Generation of superoxide radicals none Arabidopsis thaliana AT1G09090 R-ATH-9607132 RBOHB [plasma membrane] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT1G09090 R-ATH-9611529 phospho-phosphorylated-RBOHB [plasma membrane] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT1G09240 R-ATH-9025712-2 AT1G09240 [cytosol] R-ATH-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9025754 Mugineic acid biosynthesis none Arabidopsis thaliana AT1G09540 R-ATH-9826674 AT1G09540 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT1G09570 R-ATH-8933842 AT1G09570 [cytosol] R-ATH-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8933811 Circadian rhythm none Arabidopsis thaliana AT1G09570 R-ATH-8933843 AT1G09570 [nucleoplasm] R-ATH-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8933811 Circadian rhythm none Arabidopsis thaliana AT1G09610 R-ATH-9916305-4 AT1G09610 [nucleoplasm] R-ATH-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9916190 Root angle formation: elongation and curvature response none Arabidopsis thaliana AT1G09795 R-ATH-1128263-2 AT1G09795 [plastid stroma] R-ATH-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119509 Histidine biosynthesis I none Arabidopsis thaliana AT1G10060 R-ATH-1122974 AT1G10060 [mitochondrial matrix] R-ATH-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119479 Valine degradation none Arabidopsis thaliana AT1G10070 R-ATH-1122974-5 AT1G10070 [mitochondrial matrix] R-ATH-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119479 Valine degradation none Arabidopsis thaliana AT1G10430 R-ATH-5632120-2 AT1G10430 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G10700 R-ATH-1127753 AT1G10700 [cytosol] R-ATH-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119278 PRPP biosynthesis I none Arabidopsis thaliana AT1G11300 R-ATH-9611469-3 phospho-phosphorylated-SDS2 [plasma membrane] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT1G11300 R-ATH-9611553-3 ubiquitinated-SDS2 [cytosol] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT1G11303 R-ATH-9611469 phospho-phosphorylated-SDS2 [plasma membrane] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT1G11303 R-ATH-9611553 ubiquitinated-SDS2 [cytosol] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT1G11330 R-ATH-9611469-2 phospho-phosphorylated-SDS2 [plasma membrane] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT1G11330 R-ATH-9611553-2 ubiquitinated-SDS2 [cytosol] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT1G11350 R-ATH-9611469-4 phospho-phosphorylated-SDS2 [plasma membrane] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT1G11350 R-ATH-9611553-4 ubiquitinated-SDS2 [cytosol] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT1G11720 R-ATH-1127243 AT1G11720 [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT1G11720 R-ATH-9918268 soluble Starch Synthase (SSIIIA/SSIII-2) [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT1G11790 R-ATH-1129739 AT1G11790 [cytosol] R-ATH-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119389 Phenylalanine biosynthesis I none Arabidopsis thaliana AT1G11860 R-ATH-8987488 AT1G11860 [mitochondrial matrix] R-ATH-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119312 Photorespiration none Arabidopsis thaliana AT1G12010 R-ATH-1122827-3 AT1G12010 [cytosol] R-ATH-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119334 Ethylene biosynthesis from methionine none Arabidopsis thaliana AT1G12050 R-ATH-1122849 AT1G12050 [mitochondrion] R-ATH-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119506 tyrosine degradation I none Arabidopsis thaliana AT1G12240 R-ATH-1126888-2 AT1G12240 [cytosol] R-ATH-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119360 Fructan biosynthesis none Arabidopsis thaliana AT1G12480 R-ATH-3899389 AT1G12480 [plasma membrane] R-ATH-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis thaliana AT1G12480 R-ATH-3899371 phospho-AT1G12480 [plasma membrane] R-ATH-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis thaliana AT1G12560 R-ATH-9639892-2 AT1G12560 [cell wall] R-ATH-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639861 Development of root hair none Arabidopsis thaliana AT1G12610 R-ATH-8879029-2 DREB1G [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT1G12610 R-ATH-8879071-2 CBF1 homolog [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT1G12610 R-ATH-8879085-2 AT1G12610 [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT1G12630 R-ATH-9826696-2 AT1G12630 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT1G12780 R-ATH-1130394-2 AT1G12780 [cytosol] R-ATH-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119452 Galactose degradation II none Arabidopsis thaliana AT1G12820 R-ATH-5608218-2 AT1G12820 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT1G12820 R-ATH-5608218-2 AT1G12820 [nucleoplasm] R-ATH-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9608575 Reproductive meristem phase change none Arabidopsis thaliana AT1G12820 R-ATH-9658968-2 AT1G12820 [cytosol] R-ATH-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9608575 Reproductive meristem phase change none Arabidopsis thaliana AT1G12860 R-ATH-8879006-2 AT1G12860 [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT1G12900 R-ATH-1127873-2 AT1G12900 [plastid stroma] R-ATH-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119424 Plastid glycolysis none Arabidopsis thaliana AT1G12900 R-ATH-1127873-2 AT1G12900 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT1G13440 R-ATH-1122785 AT1G13440 [cytosol] R-ATH-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119273 Lysine biosynthesis I none Arabidopsis thaliana AT1G13440 R-ATH-1126726 AT1G13440 [cytosol] R-ATH-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119273 Lysine biosynthesis I none Arabidopsis thaliana AT1G13440 R-ATH-1122785 AT1G13440 [cytosol] R-ATH-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119283 Lysine biosynthesis II none Arabidopsis thaliana AT1G13440 R-ATH-1126726 AT1G13440 [cytosol] R-ATH-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119283 Lysine biosynthesis II none Arabidopsis thaliana AT1G13440 R-ATH-1122785 AT1G13440 [cytosol] R-ATH-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119570 Cytosolic glycolysis none Arabidopsis thaliana AT1G13460 R-ATH-5632129-2 AT1G13460 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G13560 R-ATH-8854445-2 AT1G13560 [cytosol] R-ATH-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119276 Choline biosynthesis III none Arabidopsis thaliana AT1G13580 R-ATH-9025439-2 AT1G13580 [endoplasmic reticulum membrane] R-ATH-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119325 Sphingolipid metabolism none Arabidopsis thaliana AT1G13740 R-ATH-6787262-3 AT1G13740 [nucleoplasm] R-ATH-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6787011 Jasmonic acid signaling none Arabidopsis thaliana AT1G13790 R-ATH-9684723 AT1G13790 [cytosol] R-ATH-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9609102 Flower development none Arabidopsis thaliana AT1G14080 R-ATH-5655076-4 AT1G14080 [Golgi lumen] R-ATH-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5655101 Xyloglucan biosynthesis none Arabidopsis thaliana AT1G14100 R-ATH-5655076-8 AT1G14100 [Golgi lumen] R-ATH-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5655101 Xyloglucan biosynthesis none Arabidopsis thaliana AT1G14110 R-ATH-5655076-5 AT1G14110 [Golgi lumen] R-ATH-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5655101 Xyloglucan biosynthesis none Arabidopsis thaliana AT1G14290 R-ATH-9025463-2 AT1G14290 [endoplasmic reticulum membrane] R-ATH-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119325 Sphingolipid metabolism none Arabidopsis thaliana AT1G14520 R-ATH-1127523-4 AT1G14520 [cytosol] R-ATH-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Arabidopsis thaliana AT1G14580 R-ATH-5679402-3 AT1G14580 [nucleoplasm] R-ATH-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5679411 Gibberellin signaling none Arabidopsis thaliana AT1G14810 R-ATH-1125504 AT1G14810 [cytosol] R-ATH-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119273 Lysine biosynthesis I none Arabidopsis thaliana AT1G14810 R-ATH-1125504 AT1G14810 [cytosol] R-ATH-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119283 Lysine biosynthesis II none Arabidopsis thaliana AT1G14810 R-ATH-1125504 AT1G14810 [cytosol] R-ATH-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119295 Homoserine biosynthesis none Arabidopsis thaliana AT1G14810 R-ATH-5606489 AT1G14810 [plastid stroma] R-ATH-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119419 Lysine biosynthesis VI none Arabidopsis thaliana AT1G14920 R-ATH-5679455 AT1G14920 [nucleoplasm] R-ATH-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5679411 Gibberellin signaling none Arabidopsis thaliana AT1G14920 R-ATH-6787020 AT1G14920 [cytosol] R-ATH-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6787011 Jasmonic acid signaling none Arabidopsis thaliana AT1G15110 R-ATH-9025372 AT1G15110 [endoplasmic reticulum membrane] R-ATH-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119402 Phospholipid biosynthesis I none Arabidopsis thaliana AT1G15130 R-ATH-1123250 AT1G15130 [cytosol] R-ATH-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119265 Tetrahydrofolate biosynthesis I none Arabidopsis thaliana AT1G15130 R-ATH-1123250 AT1G15130 [cytosol] R-ATH-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119523 Tetrahydrofolate biosynthesis II none Arabidopsis thaliana AT1G15750 R-ATH-5632157-2 AT1G15750 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G15750 R-ATH-5632157-2 AT1G15750 [nucleoplasm] R-ATH-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5654828 Strigolactone signaling none Arabidopsis thaliana AT1G15950 R-ATH-1128200-2 AT1G15950 [cytosol] R-ATH-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119316 Phenylpropanoid biosynthesis none Arabidopsis thaliana AT1G16300 R-ATH-1125920 AT1G16300 [cytosol] R-ATH-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119273 Lysine biosynthesis I none Arabidopsis thaliana AT1G16300 R-ATH-1125920 AT1G16300 [cytosol] R-ATH-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119283 Lysine biosynthesis II none Arabidopsis thaliana AT1G16340 R-ATH-1127527 AT1G16340 [cytosol] R-ATH-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Arabidopsis thaliana AT1G16350 R-ATH-1123404 AT1G16350 [peroxisomal matrix] R-ATH-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119407 Ureide biosynthesis none Arabidopsis thaliana AT1G16400 R-ATH-1130084-4 AT1G16400 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT1G16410 R-ATH-1130084 AT1G16410 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT1G16460 R-ATH-1128626-2 AT1G16460 [cytosol] R-ATH-1119581 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119581 Thiosulfate disproportionation III (rhodanese) none Arabidopsis thaliana AT1G16460 R-ATH-1128626-2 AT1G16460 [cytosol] R-ATH-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119612 Cysteine degradation none Arabidopsis thaliana AT1G17050 R-ATH-1123482-2 AT1G17050 [plastid stroma] R-ATH-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119367 Polyisoprenoid biosynthesis none Arabidopsis thaliana AT1G17420 R-ATH-1123433-2 AT1G17420 [cytosol] R-ATH-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119332 Jasmonic acid biosynthesis none Arabidopsis thaliana AT1G17420 R-ATH-1123433-2 AT1G17420 [cytosol] R-ATH-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119618 13-LOX and 13-HPL pathway none Arabidopsis thaliana AT1G17550 R-ATH-4415101 AT1G17550 [cytosol] R-ATH-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis thaliana AT1G17550 R-ATH-4415101 AT1G17550 [cytosol] R-ATH-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639861 Development of root hair none Arabidopsis thaliana AT1G17720 R-ATH-5632264-2 AT1G17720 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G17890 R-ATH-1125014 AT1G17890 [cytosol] R-ATH-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis thaliana AT1G18040 R-ATH-9640664-3 AT1G18040 [nucleoplasm] R-ATH-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640760 G1 phase none Arabidopsis thaliana AT1G18270 R-ATH-5149644 AT1G18270 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT1G18500 R-ATH-1127173-3 AT1G18500 [cytosol] R-ATH-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119540 Leucine biosynthesis none Arabidopsis thaliana AT1G18690 R-ATH-5655070-3 AT1G18690 [Golgi lumen] R-ATH-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5655101 Xyloglucan biosynthesis none Arabidopsis thaliana AT1G18870 R-ATH-6787276 AT1G18870 [plastid stroma] R-ATH-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119261 Salicylate biosynthesis none Arabidopsis thaliana AT1G18870 R-ATH-6787950 AT1G18870 [nucleoplasm] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT1G19080 R-ATH-9675860-2 AT1G19080 [nucleoplasm] R-ATH-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675824 DNA replication Initiation none Arabidopsis thaliana AT1G19220 R-ATH-5608125 AT1G19220 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT1G19230 R-ATH-9607102 AT1G19230 [mitochondrion] R-ATH-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9607185 Generation of superoxide radicals none Arabidopsis thaliana AT1G19350 R-ATH-5632334-3 AT1G19350 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G19350 R-ATH-5632197-3 phospho-AT1G19350 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G19350 R-ATH-5632183-3 phospho-AT1G19350 [cytosol] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G19350 R-ATH-5632334-3 AT1G19350 [nucleoplasm] R-ATH-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5679411 Gibberellin signaling none Arabidopsis thaliana AT1G19540 R-ATH-1123717 AT1G19540 [cytosol] R-ATH-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119395 Maackiain biosynthesis none Arabidopsis thaliana AT1G19540 R-ATH-1123717 AT1G19540 [cytosol] R-ATH-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119453 Medicarpin biosynthesis none Arabidopsis thaliana AT1G19850 R-ATH-5608137 AT1G19850 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT1G19920 R-ATH-1126344 AT1G19920 [plastid stroma] R-ATH-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119529 Sulfate activation for sulfonation none Arabidopsis thaliana AT1G20050 R-ATH-1123211 AT1G20050 [cytosol] R-ATH-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Arabidopsis thaliana AT1G20050 R-ATH-1123211 AT1G20050 [cytosol] R-ATH-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119370 Sterol biosynthesis none Arabidopsis thaliana AT1G20050 R-ATH-1123211 AT1G20050 [cytosol] R-ATH-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119439 Cholesterol biosynthesis III (via desmosterol) none Arabidopsis thaliana AT1G20050 R-ATH-1123211 AT1G20050 [cytosol] R-ATH-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119559 Cholesterol biosynthesis I none Arabidopsis thaliana AT1G20330 R-ATH-1127899 AT1G20330 [cytosol] R-ATH-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119370 Sterol biosynthesis none Arabidopsis thaliana AT1G20900 R-ATH-9826666-2 AT1G20900 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT1G20925 R-ATH-8868866-2 AT1G20925 [endoplasmic reticulum membrane] R-ATH-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8868949 Intracellular auxin transport none Arabidopsis thaliana AT1G21400 R-ATH-9611889-3 AT1G21400 [mitochondrial matrix] R-ATH-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119479 Valine degradation none Arabidopsis thaliana AT1G21690 R-ATH-9675877 AT1G21690 [nucleoplasm] R-ATH-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675815 Leading strand synthesis none Arabidopsis thaliana AT1G22015 R-ATH-1128319 AT1G22015 [cytosol] R-ATH-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119341 Galactosylcyclitol biosynthesis none Arabidopsis thaliana AT1G22020 R-ATH-8987574-2 AT1G22020 [mitochondrial matrix] R-ATH-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119311 Glycine biosynthesis I none Arabidopsis thaliana AT1G22410 R-ATH-1129934 AT1G22410 [plastid stroma] R-ATH-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119430 Chorismate biosynthesis none Arabidopsis thaliana AT1G22490 R-ATH-9826680-3 AT1G22490 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT1G22650 R-ATH-9675481-3 AT1G22650 [cytosol] R-ATH-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030654 Primary root development none Arabidopsis thaliana AT1G22940 R-ATH-1125275 AT1G22940 [cytosol] R-ATH-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119629 Thiamine biosynthesis none Arabidopsis thaliana AT1G23080 R-ATH-1128126-2 AT1G23080 [endosome] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT1G23080 R-ATH-5679348-2 AT1G23080 [plasma membrane] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT1G23190 R-ATH-1128632-2 AT1G23190 [cytosol] R-ATH-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119465 Sucrose biosynthesis none Arabidopsis thaliana AT1G23190 R-ATH-1128632-2 AT1G23190 [cytosol] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT1G23310 R-ATH-8987548 AT1G23310 [peroxisomal matrix] R-ATH-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119312 Photorespiration none Arabidopsis thaliana AT1G23320 R-ATH-1126549-3 AT1G23320 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT1G23730 R-ATH-1130327-2 AT1G23730 [cytosol] R-ATH-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119586 Cyanate degradation none Arabidopsis thaliana AT1G23870 R-ATH-1125638-3 AT1G23870 [cytosol] R-ATH-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119516 Trehalose biosynthesis I none Arabidopsis thaliana AT1G24320 R-ATH-9675500 AT1G24320 [endoplasmic reticulum membrane] R-ATH-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030654 Primary root development none Arabidopsis thaliana AT1G24807 R-ATH-1128637-6 AT1G24807 [chloroplast] R-ATH-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119494 Tryptophan biosynthesis none Arabidopsis thaliana AT1G24909 R-ATH-1128637-5 AT1G24909 [chloroplast] R-ATH-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119494 Tryptophan biosynthesis none Arabidopsis thaliana AT1G25083 R-ATH-1128637-2 AT1G25083 [chloroplast] R-ATH-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119494 Tryptophan biosynthesis none Arabidopsis thaliana AT1G25155 R-ATH-1128637-3 AT1G25155 [chloroplast] R-ATH-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119494 Tryptophan biosynthesis none Arabidopsis thaliana AT1G25220 R-ATH-1128637 AT1G25220 [chloroplast] R-ATH-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119494 Tryptophan biosynthesis none Arabidopsis thaliana AT1G25250 R-ATH-5679470-3 AT1G25250 [nucleoplasm] R-ATH-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5679411 Gibberellin signaling none Arabidopsis thaliana AT1G25440 R-ATH-9826604 AT1G25440 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT1G26570 R-ATH-9681886-4 AT1G26570 [cytosol] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT1G26840 R-ATH-9640752 AT1G26840 [nucleoplasm] R-ATH-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640882 Assembly of pre-replication complex none Arabidopsis thaliana AT1G26840 R-ATH-9640752 AT1G26840 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT1G27600 R-ATH-5654942 AT1G27600 [Golgi lumen] R-ATH-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5654909 Xylan biosynthesis none Arabidopsis thaliana AT1G27680 R-ATH-1127562-3 AT1G27680 [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT1G27680 R-ATH-1130466-3 AT1G27680 [cytosol] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT1G27980 R-ATH-1130231 AT1G27980 [endoplasmic reticulum membrane] R-ATH-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119325 Sphingolipid metabolism none Arabidopsis thaliana AT1G29410 R-ATH-1129723-2 AT1G29410 [chloroplast] R-ATH-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119494 Tryptophan biosynthesis none Arabidopsis thaliana AT1G30100 R-ATH-5221144-4 AT1G30100 [plastid] R-ATH-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119374 Abscisic acid biosynthesis none Arabidopsis thaliana AT1G30210 R-ATH-9826635 PCF8 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT1G30330 R-ATH-5608154 AT1G30330 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT1G30400 R-ATH-9618186-2 AT1G30400 [plant-type vacuole membrane] R-ATH-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9618218 Arsenic uptake and detoxification none Arabidopsis thaliana AT1G30410 R-ATH-9618186-3 AT1G30410 [plant-type vacuole membrane] R-ATH-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9618218 Arsenic uptake and detoxification none Arabidopsis thaliana AT1G30420 R-ATH-9618186-4 AT1G30420 [plant-type vacuole membrane] R-ATH-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9618218 Arsenic uptake and detoxification none Arabidopsis thaliana AT1G30620 R-ATH-1125489-2 AT1G30620 [Golgi membrane] R-ATH-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis thaliana AT1G30620 R-ATH-1127743-2 AT1G30620 [cytosol] R-ATH-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis thaliana AT1G30620 R-ATH-1125489-2 AT1G30620 [Golgi membrane] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT1G30620 R-ATH-1125489-2 AT1G30620 [Golgi membrane] R-ATH-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis thaliana AT1G30620 R-ATH-1127743-2 AT1G30620 [cytosol] R-ATH-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis thaliana AT1G31220 R-ATH-1127414 AT1G31220 [cytosol] R-ATH-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119265 Tetrahydrofolate biosynthesis I none Arabidopsis thaliana AT1G31230 R-ATH-1125926 AT1G31230 [cytosol] R-ATH-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119273 Lysine biosynthesis I none Arabidopsis thaliana AT1G31230 R-ATH-1125926 AT1G31230 [cytosol] R-ATH-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119283 Lysine biosynthesis II none Arabidopsis thaliana AT1G31230 R-ATH-1125926 AT1G31230 [cytosol] R-ATH-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119295 Homoserine biosynthesis none Arabidopsis thaliana AT1G31230 R-ATH-5606498 AT1G31230 [plastid stroma] R-ATH-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119419 Lysine biosynthesis VI none Arabidopsis thaliana AT1G31670 R-ATH-1128902-3 AT1G31670 [cytosol] R-ATH-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119271 Threonine degradation none Arabidopsis thaliana AT1G31670 R-ATH-1128902-3 AT1G31670 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT1G31670 R-ATH-9658656-3 AT1G31670 [cytosol] R-ATH-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119567 Beta-alanine biosynthesis I none Arabidopsis thaliana AT1G31690 R-ATH-1128902 AT1G31690 [cytosol] R-ATH-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119271 Threonine degradation none Arabidopsis thaliana AT1G31690 R-ATH-1128902 AT1G31690 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT1G31690 R-ATH-9658656 AT1G31690 [cytosol] R-ATH-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119567 Beta-alanine biosynthesis I none Arabidopsis thaliana AT1G31710 R-ATH-1128902-2 AT1G31710 [cytosol] R-ATH-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119271 Threonine degradation none Arabidopsis thaliana AT1G31710 R-ATH-1128902-2 AT1G31710 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT1G31710 R-ATH-9658656-2 AT1G31710 [cytosol] R-ATH-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119567 Beta-alanine biosynthesis I none Arabidopsis thaliana AT1G31860 R-ATH-1123596 AT1G31860 [plastid stroma] R-ATH-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119509 Histidine biosynthesis I none Arabidopsis thaliana AT1G31885 R-ATH-9618197 AT1G31885 [plasma membrane] R-ATH-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9618218 Arsenic uptake and detoxification none Arabidopsis thaliana AT1G32060 R-ATH-5149678 AT1G32060 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT1G32200 R-ATH-1122783 AT1G32200 [chloroplast stroma] R-ATH-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119402 Phospholipid biosynthesis I none Arabidopsis thaliana AT1G32470 R-ATH-8987554-2 AT1G32470 [mitochondrial matrix] R-ATH-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119312 Photorespiration none Arabidopsis thaliana AT1G32640 R-ATH-6787119 AT1G32640 [nucleoplasm] R-ATH-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6787011 Jasmonic acid signaling none Arabidopsis thaliana AT1G32900 R-ATH-9918210 granule-bound starch synthase 1 (GBSSI, or Waxy) [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT1G32900 R-ATH-9918222 AT1G32900 [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT1G32900 R-ATH-9626344 AT1G32900 [plastid stroma] R-ATH-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9626305 Regulatory network of nutrient accumulation none Arabidopsis thaliana AT1G33800 R-ATH-9916305-3 AT1G33800 [nucleoplasm] R-ATH-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9916190 Root angle formation: elongation and curvature response none Arabidopsis thaliana AT1G34170 R-ATH-9675365-2 AT1G34170 [nucleoplasm] R-ATH-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675508 Root elongation none Arabidopsis thaliana AT1G34310 R-ATH-9675365 AT1G34310 [nucleoplasm] R-ATH-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675508 Root elongation none Arabidopsis thaliana AT1G34390 R-ATH-9675365-4 AT1G34390 [nucleoplasm] R-ATH-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675508 Root elongation none Arabidopsis thaliana AT1G34410 R-ATH-9675365-3 AT1G34410 [nucleoplasm] R-ATH-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675508 Root elongation none Arabidopsis thaliana AT1G35190 R-ATH-1122541-3 AT1G35190 [cytosol] R-ATH-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Arabidopsis thaliana AT1G35190 R-ATH-1122541-3 AT1G35190 [cytosol] R-ATH-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Arabidopsis thaliana AT1G35240 R-ATH-9675365-6 AT1G35240 [nucleoplasm] R-ATH-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675508 Root elongation none Arabidopsis thaliana AT1G35520 R-ATH-9675365-7 AT1G35520 [nucleoplasm] R-ATH-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675508 Root elongation none Arabidopsis thaliana AT1G35540 R-ATH-9675365-5 AT1G35540 [nucleoplasm] R-ATH-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675508 Root elongation none Arabidopsis thaliana AT1G35580 R-ATH-9675481-4 AT1G35580 [cytosol] R-ATH-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030654 Primary root development none Arabidopsis thaliana AT1G36370 R-ATH-8987574 AT1G36370 [mitochondrial matrix] R-ATH-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119311 Glycine biosynthesis I none Arabidopsis thaliana AT1G37130 R-ATH-1130304-2 AT1G37130 [cytosol] R-ATH-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119291 Nitrate assimilation none Arabidopsis thaliana AT1G42970 R-ATH-1126728 AT1G42970 [plastid stroma] R-ATH-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119424 Plastid glycolysis none Arabidopsis thaliana AT1G43710 R-ATH-8854121 AT1G43710 [cytosol] R-ATH-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119556 Choline biosynthesis I none Arabidopsis thaliana AT1G44318 R-ATH-4827046 AT1G44318 [plastid stroma] R-ATH-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-4827054 Tetrapyrrole biosynthesis I none Arabidopsis thaliana AT1G44350 R-ATH-2685721 AT1G44350 [cytosol] R-ATH-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119580 IAA biosynthesis II none Arabidopsis thaliana AT1G44900 R-ATH-9640753 AT1G44900 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT1G44900 R-ATH-9640753 AT1G44900 [nucleoplasm] R-ATH-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675824 DNA replication Initiation none Arabidopsis thaliana AT1G46264 R-ATH-9826683 HSFB4A [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT1G46768 R-ATH-8879009-3 AT1G46768 [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT1G47270 R-ATH-9916252 OsEGT1 [nucleoplasm] R-ATH-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9916190 Root angle formation: elongation and curvature response none Arabidopsis thaliana AT1G47840 R-ATH-1123465 AT1G47840 [plastid stroma] R-ATH-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119424 Plastid glycolysis none Arabidopsis thaliana AT1G47840 R-ATH-5633368 AT1G47840 [cytosol] R-ATH-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119601 Trehalose degradation II none Arabidopsis thaliana AT1G47870 R-ATH-9640718 AT1G47870 [nucleoplasm] R-ATH-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640887 G1/S transition none Arabidopsis thaliana AT1G48000 R-ATH-9031290 AT1G48000 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT1G48030 R-ATH-8986605 AT1G48030 [mitochondrial matrix] R-ATH-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119312 Photorespiration none Arabidopsis thaliana AT1G48030 R-ATH-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-ATH-1119351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119351 Mitochondrial pyruvate metabolism none Arabidopsis thaliana AT1G48030 R-ATH-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT1G48520 R-ATH-9675439 AT1G48520 [mitochondrial matrix] R-ATH-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030654 Primary root development none Arabidopsis thaliana AT1G48600 R-ATH-8854127-2 AT1G48600 [cytosol] R-ATH-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119556 Choline biosynthesis I none Arabidopsis thaliana AT1G48850 R-ATH-1130456 AT1G48850 [plastid stroma] R-ATH-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119430 Chorismate biosynthesis none Arabidopsis thaliana AT1G48860 R-ATH-1128197-2 AT1G48860 [plastid stroma] R-ATH-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119430 Chorismate biosynthesis none Arabidopsis thaliana AT1G49250 R-ATH-9675845 AT1G49250 [nucleoplasm] R-ATH-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675782 Maturation none Arabidopsis thaliana AT1G49720 R-ATH-9928801-2 AT1G49720 [nucleoplasm] R-ATH-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9928995 Drought escape (DE) via ABA-dependent pathway none Arabidopsis thaliana AT1G50090 R-ATH-1122974-2 AT1G50090 [mitochondrial matrix] R-ATH-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119479 Valine degradation none Arabidopsis thaliana AT1G50110 R-ATH-1122974-3 AT1G50110 [mitochondrial matrix] R-ATH-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119479 Valine degradation none Arabidopsis thaliana AT1G50370 R-ATH-5632121 AT1G50370 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G50430 R-ATH-1123867 AT1G50430 [cytosol] R-ATH-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119370 Sterol biosynthesis none Arabidopsis thaliana AT1G50450 R-ATH-1123943 AT1G50450 [plastid] R-ATH-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119365 Lysine degradation II none Arabidopsis thaliana AT1G50460 R-ATH-1127928 AT1G50460 [cytosol] R-ATH-1119595 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119595 Mannose degradation none Arabidopsis thaliana AT1G50460 R-ATH-1127928 AT1G50460 [cytosol] R-ATH-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119601 Trehalose degradation II none Arabidopsis thaliana AT1G50460 R-ATH-1127928 AT1G50460 [cytosol] R-ATH-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119628 GDP-mannose metabolism none Arabidopsis thaliana AT1G50480 R-ATH-1126542 AT1G50480 [cytosol] R-ATH-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119523 Tetrahydrofolate biosynthesis II none Arabidopsis thaliana AT1G50480 R-ATH-1126542 AT1G50480 [cytosol] R-ATH-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119617 Folate polyglutamylation I none Arabidopsis thaliana AT1G51260 R-ATH-1130036 AT1G51260 [endoplasmic reticulum membrane] R-ATH-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119402 Phospholipid biosynthesis I none Arabidopsis thaliana AT1G51340 R-ATH-9639088-2 AT1G51340 [plasma membrane] R-ATH-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639136 Response to Aluminum stress none Arabidopsis thaliana AT1G51420 R-ATH-1127089-2 AT1G51420 [cytosol] R-ATH-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119465 Sucrose biosynthesis none Arabidopsis thaliana AT1G51560 R-ATH-1126034 AT1G51560 [cytosol] R-ATH-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119534 Pyridoxal 5'-phosphate salvage pathway none Arabidopsis thaliana AT1G51560 R-ATH-1126034 AT1G51560 [cytosol] R-ATH-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119594 Pyridoxal 5'-phosphate biosynthesis none Arabidopsis thaliana AT1G51660 R-ATH-9675354-2 AT1G51660 [nucleoplasm] R-ATH-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675508 Root elongation none Arabidopsis thaliana AT1G51660 R-ATH-9675335-2 AT1G51660 [mitochondrial matrix] R-ATH-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675508 Root elongation none Arabidopsis thaliana AT1G51680 R-ATH-1125406 AT1G51680 [cytosol] R-ATH-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119418 Suberin biosynthesis none Arabidopsis thaliana AT1G51690 R-ATH-5632264 AT1G51690 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G51760 R-ATH-2685730-4 AT1G51760 [cytosol] R-ATH-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119580 IAA biosynthesis II none Arabidopsis thaliana AT1G51780 R-ATH-2685730-2 AT1G51780 [cytosol] R-ATH-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119580 IAA biosynthesis II none Arabidopsis thaliana AT1G51950 R-ATH-1125997 AT1G51950 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT1G51950 R-ATH-1125997 AT1G51950 [nucleoplasm] R-ATH-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030680 Crown root development none Arabidopsis thaliana AT1G52340 R-ATH-1250417 AT1G52340 [cytosol] R-ATH-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119374 Abscisic acid biosynthesis none Arabidopsis thaliana AT1G52570 R-ATH-1125906-2 AT1G52570 [cytosol] R-ATH-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119276 Choline biosynthesis III none Arabidopsis thaliana AT1G53000 R-ATH-1129926 AT1G53000 [cytosol] R-ATH-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Arabidopsis thaliana AT1G53160 R-ATH-9035727 AT1G53160 [cytosol] R-ATH-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9035605 Regulation of seed size none Arabidopsis thaliana AT1G53160 R-ATH-9035692 AT1G53160 [nucleoplasm] R-ATH-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9035605 Regulation of seed size none Arabidopsis thaliana AT1G53240 R-ATH-1128071-2 AT1G53240 [mitochondrial matrix] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT1G53510 R-ATH-9930197-2 MPK8 [nucleoplasm] R-ATH-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9766881 TF network involved in salinity response none Arabidopsis thaliana AT1G53580 R-ATH-9612372 AT1G53580 [mitochondrial matrix] R-ATH-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119612 Cysteine degradation none Arabidopsis thaliana AT1G54100 R-ATH-1124813 AT1G54100 [mitochondrial matrix] R-ATH-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119337 Proline degradation none Arabidopsis thaliana AT1G54100 R-ATH-8986570 AT1G54100 [mitochondrial matrix] R-ATH-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119365 Lysine degradation II none Arabidopsis thaliana AT1G54100 R-ATH-9658682 AT1G54100 [cytosol] R-ATH-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119567 Beta-alanine biosynthesis I none Arabidopsis thaliana AT1G54450 R-ATH-5632268-4 AT1G54450 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G55090 R-ATH-1128322 AT1G55090 [cytosol] R-ATH-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119384 NAD biosynthesis I (from aspartate) none Arabidopsis thaliana AT1G55110 R-ATH-5679401 AT1G55110 [nucleoplasm] R-ATH-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5679411 Gibberellin signaling none Arabidopsis thaliana AT1G55180 R-ATH-1124786 AT1G55180 [cytosol] R-ATH-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119276 Choline biosynthesis III none Arabidopsis thaliana AT1G55510 R-ATH-9611864-2 AT1G55510 [mitochondrial matrix] R-ATH-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119479 Valine degradation none Arabidopsis thaliana AT1G55920 R-ATH-1127723-2 AT1G55920 [cytosol] R-ATH-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119331 Cysteine biosynthesis I none Arabidopsis thaliana AT1G56190 R-ATH-5149643-2 AT1G56190 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT1G56430 R-ATH-9025712-3 AT1G56430 [cytosol] R-ATH-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9025754 Mugineic acid biosynthesis none Arabidopsis thaliana AT1G57560 R-ATH-9826674-2 AT1G57560 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT1G58080 R-ATH-1128263 AT1G58080 [plastid stroma] R-ATH-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119509 Histidine biosynthesis I none Arabidopsis thaliana AT1G58180 R-ATH-1128980 AT1G58180 [cytosol] R-ATH-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119586 Cyanate degradation none Arabidopsis thaliana AT1G58260 R-ATH-1130084-5 AT1G58260 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT1G59830 R-ATH-5632120-3 AT1G59830 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G60140 R-ATH-1125638 AT1G60140 [cytosol] R-ATH-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119516 Trehalose biosynthesis I none Arabidopsis thaliana AT1G60550 R-ATH-4752547 AT1G60550 [plastid stroma] R-ATH-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119498 Phylloquinone biosynthesis none Arabidopsis thaliana AT1G60600 R-ATH-1122295 AT1G60600 [cytosol] R-ATH-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119353 Linear furanocoumarin biosynthesis none Arabidopsis thaliana AT1G61800 R-ATH-9918175-3 AT1G61800 [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT1G62380 R-ATH-1122827-2 AT1G62380 [cytosol] R-ATH-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119334 Ethylene biosynthesis from methionine none Arabidopsis thaliana AT1G62430 R-ATH-1123745-2 AT1G62430 [endoplasmic reticulum membrane] R-ATH-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119260 Cardiolipin biosynthesis none Arabidopsis thaliana AT1G62430 R-ATH-1123745-2 AT1G62430 [endoplasmic reticulum membrane] R-ATH-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119402 Phospholipid biosynthesis I none Arabidopsis thaliana AT1G62660 R-ATH-1126888 AT1G62660 [cytosol] R-ATH-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119360 Fructan biosynthesis none Arabidopsis thaliana AT1G62980 R-ATH-9639892 AT1G62980 [cell wall] R-ATH-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639861 Development of root hair none Arabidopsis thaliana AT1G63030 R-ATH-8879029-6 DREB1G [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT1G63030 R-ATH-8879071-6 CBF1 homolog [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT1G63030 R-ATH-8879085-6 AT1G63030 [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT1G63100 R-ATH-5632261 AT1G63100 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G63160 R-ATH-9675851 AT1G63160 [nucleoplasm] R-ATH-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675815 Leading strand synthesis none Arabidopsis thaliana AT1G63180 R-ATH-1130394 AT1G63180 [cytosol] R-ATH-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119452 Galactose degradation II none Arabidopsis thaliana AT1G63290 R-ATH-1124905-2 AT1G63290 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT1G63680 R-ATH-1122593 AT1G63680 [cytosol] R-ATH-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119436 Peptidoglycan biosynthesis I none Arabidopsis thaliana AT1G63680 R-ATH-1122593 AT1G63680 [cytosol] R-ATH-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119523 Tetrahydrofolate biosynthesis II none Arabidopsis thaliana AT1G63680 R-ATH-1122593 AT1G63680 [cytosol] R-ATH-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119617 Folate polyglutamylation I none Arabidopsis thaliana AT1G63970 R-ATH-1129922 AT1G63970 [plastid stroma] R-ATH-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119464 Methylerythritol phosphate pathway none Arabidopsis thaliana AT1G64060 R-ATH-9607105 AT1G64060 [mitochondrion] R-ATH-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9607185 Generation of superoxide radicals none Arabidopsis thaliana AT1G64230 R-ATH-5654827 AT1G64230 [nucleoplasm] R-ATH-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5654828 Strigolactone signaling none Arabidopsis thaliana AT1G64280 R-ATH-6788127 AT1G64280 [nucleoplasm] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT1G64280 R-ATH-6788179 AT1G64280 [cytosol] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT1G64440 R-ATH-1122936-3 AT1G64440 [cytosol] R-ATH-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119452 Galactose degradation II none Arabidopsis thaliana AT1G64970 R-ATH-3321260 AT1G64970 [chloroplast stroma] R-ATH-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119287 Vitamin E biosynthesis none Arabidopsis thaliana AT1G65060 R-ATH-1129650 AT1G65060 [cytosol] R-ATH-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119418 Suberin biosynthesis none Arabidopsis thaliana AT1G65470 R-ATH-9675280 AT1G65470 [nucleoplasm] R-ATH-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030680 Crown root development none Arabidopsis thaliana AT1G65610 R-ATH-9675272 AT1G65610 [plasma membrane] R-ATH-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030654 Primary root development none Arabidopsis thaliana AT1G65680 R-ATH-9924407-2 EXPB5 [basolateral plasma membrane] R-ATH-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9924451 Shoot (tiller) formation and regulation of tiller angle none Arabidopsis thaliana AT1G65681 R-ATH-9924407-3 EXPB5 [basolateral plasma membrane] R-ATH-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9924451 Shoot (tiller) formation and regulation of tiller angle none Arabidopsis thaliana AT1G66200 R-ATH-1127192 AT1G66200 [cytosol] R-ATH-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119291 Nitrate assimilation none Arabidopsis thaliana AT1G66200 R-ATH-1127192 AT1G66200 [cytosol] R-ATH-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119293 Glutamine biosynthesis I none Arabidopsis thaliana AT1G66200 R-ATH-1127192 AT1G66200 [cytosol] R-ATH-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119443 Ammonia assimilation cycle none Arabidopsis thaliana AT1G66750 R-ATH-9640664-2 AT1G66750 [nucleoplasm] R-ATH-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640760 G1 phase none Arabidopsis thaliana AT1G67070 R-ATH-1126531-2 AT1G67070 [cytosol] R-ATH-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119410 Ascorbate biosynthesis none Arabidopsis thaliana AT1G67070 R-ATH-1126531-2 AT1G67070 [cytosol] R-ATH-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119628 GDP-mannose metabolism none Arabidopsis thaliana AT1G67090 R-ATH-8987531-4 AT1G67090 [chloroplast] R-ATH-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119312 Photorespiration none Arabidopsis thaliana AT1G67090 R-ATH-1125951-4 AT1G67090 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT1G67320 R-ATH-9646043 AT1G67320 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT1G67320 R-ATH-9646043 AT1G67320 [nucleoplasm] R-ATH-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675782 Maturation none Arabidopsis thaliana AT1G67320 R-ATH-9646043 AT1G67320 [nucleoplasm] R-ATH-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675815 Leading strand synthesis none Arabidopsis thaliana AT1G67320 R-ATH-9646043 AT1G67320 [nucleoplasm] R-ATH-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675824 DNA replication Initiation none Arabidopsis thaliana AT1G67320 R-ATH-9646043 AT1G67320 [nucleoplasm] R-ATH-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675885 Lagging strand synthesis none Arabidopsis thaliana AT1G67490 R-ATH-9675500-2 AT1G67490 [endoplasmic reticulum membrane] R-ATH-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030654 Primary root development none Arabidopsis thaliana AT1G67630 R-ATH-9645947 AT1G67630 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT1G67630 R-ATH-9645947 AT1G67630 [nucleoplasm] R-ATH-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675782 Maturation none Arabidopsis thaliana AT1G67630 R-ATH-9645947 AT1G67630 [nucleoplasm] R-ATH-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675815 Leading strand synthesis none Arabidopsis thaliana AT1G67630 R-ATH-9645947 AT1G67630 [nucleoplasm] R-ATH-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675824 DNA replication Initiation none Arabidopsis thaliana AT1G67630 R-ATH-9645947 AT1G67630 [nucleoplasm] R-ATH-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675885 Lagging strand synthesis none Arabidopsis thaliana AT1G67940 R-ATH-9639211 AT1G67940 [plant-type vacuole membrane] R-ATH-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639136 Response to Aluminum stress none Arabidopsis thaliana AT1G68010 R-ATH-8987448 AT1G68010 [peroxisomal matrix] R-ATH-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119312 Photorespiration none Arabidopsis thaliana AT1G68020 R-ATH-1128804 AT1G68020 [cytosol] R-ATH-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119516 Trehalose biosynthesis I none Arabidopsis thaliana AT1G68130 R-ATH-5679470-2 AT1G68130 [nucleoplasm] R-ATH-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5679411 Gibberellin signaling none Arabidopsis thaliana AT1G68520 R-ATH-9826604-2 AT1G68520 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT1G69190 R-ATH-1129585 AT1G69190 [cytosol] R-ATH-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119265 Tetrahydrofolate biosynthesis I none Arabidopsis thaliana AT1G69190 R-ATH-1129585 AT1G69190 [cytosol] R-ATH-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119523 Tetrahydrofolate biosynthesis II none Arabidopsis thaliana AT1G69260 R-ATH-6787262 AT1G69260 [nucleoplasm] R-ATH-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6787011 Jasmonic acid signaling none Arabidopsis thaliana AT1G69370 R-ATH-1126095 AT1G69370 [cytosol] R-ATH-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119389 Phenylalanine biosynthesis I none Arabidopsis thaliana AT1G69490 R-ATH-9636827 AT1G69490 [nucleoplasm] R-ATH-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9766881 TF network involved in salinity response none Arabidopsis thaliana AT1G69640 R-ATH-9025463 AT1G69640 [endoplasmic reticulum membrane] R-ATH-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119325 Sphingolipid metabolism none Arabidopsis thaliana AT1G69740 R-ATH-4827046-2 AT1G69740 [plastid stroma] R-ATH-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-4827054 Tetrapyrrole biosynthesis I none Arabidopsis thaliana AT1G69960 R-ATH-5632120 AT1G69960 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G70210 R-ATH-9640729 AT1G70210 [nucleoplasm] R-ATH-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640760 G1 phase none Arabidopsis thaliana AT1G70210 R-ATH-9640729 AT1G70210 [nucleoplasm] R-ATH-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640887 G1/S transition none Arabidopsis thaliana AT1G70290 R-ATH-1125638-2 AT1G70290 [cytosol] R-ATH-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119516 Trehalose biosynthesis I none Arabidopsis thaliana AT1G70410 R-ATH-1130327-3 AT1G70410 [cytosol] R-ATH-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119586 Cyanate degradation none Arabidopsis thaliana AT1G70560 R-ATH-1126549-2 AT1G70560 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT1G70570 R-ATH-1130162 AT1G70570 [chloroplast] R-ATH-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119494 Tryptophan biosynthesis none Arabidopsis thaliana AT1G70580 R-ATH-8987548-2 AT1G70580 [peroxisomal matrix] R-ATH-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119312 Photorespiration none Arabidopsis thaliana AT1G70730 R-ATH-1128632 AT1G70730 [cytosol] R-ATH-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119465 Sucrose biosynthesis none Arabidopsis thaliana AT1G70730 R-ATH-1128632 AT1G70730 [cytosol] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT1G70820 R-ATH-9918159 AT1G70820 [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT1G70940 R-ATH-1128126 AT1G70940 [endosome] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT1G70940 R-ATH-5679348 AT1G70940 [plasma membrane] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT1G71090 R-ATH-8868990 AT1G71090 [endoplasmic reticulum membrane] R-ATH-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8868949 Intracellular auxin transport none Arabidopsis thaliana AT1G71100 R-ATH-1126320 AT1G71100 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT1G71690 R-ATH-9916305 AT1G71690 [nucleoplasm] R-ATH-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9916190 Root angle formation: elongation and curvature response none Arabidopsis thaliana AT1G71697 R-ATH-8854108 AT1G71697 [cytosol] R-ATH-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119556 Choline biosynthesis I none Arabidopsis thaliana AT1G71920 R-ATH-1125447-2 AT1G71920 [plastid stroma] R-ATH-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119509 Histidine biosynthesis I none Arabidopsis thaliana AT1G72000 R-ATH-9675481 AT1G72000 [cytosol] R-ATH-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030654 Primary root development none Arabidopsis thaliana AT1G72210 R-ATH-9826680-2 AT1G72210 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT1G72520 R-ATH-1123433 AT1G72520 [cytosol] R-ATH-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119332 Jasmonic acid biosynthesis none Arabidopsis thaliana AT1G72520 R-ATH-1123433 AT1G72520 [cytosol] R-ATH-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119618 13-LOX and 13-HPL pathway none Arabidopsis thaliana AT1G72590 R-ATH-1125093-2 AT1G72590 [cytosol] R-ATH-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119456 Brassinosteroid biosynthesis II none Arabidopsis thaliana AT1G72770 R-ATH-4415101-2 AT1G72770 [cytosol] R-ATH-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis thaliana AT1G72770 R-ATH-4415101-2 AT1G72770 [cytosol] R-ATH-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639861 Development of root hair none Arabidopsis thaliana AT1G72810 R-ATH-1130059 AT1G72810 [cytosol] R-ATH-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119262 Threonine biosynthesis from homoserine none Arabidopsis thaliana AT1G73250 R-ATH-1125014-2 AT1G73250 [cytosol] R-ATH-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis thaliana AT1G73370 R-ATH-1128815-2 AT1G73370 [cytosol] R-ATH-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119452 Galactose degradation II none Arabidopsis thaliana AT1G73370 R-ATH-1128815-2 AT1G73370 [cytosol] R-ATH-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119465 Sucrose biosynthesis none Arabidopsis thaliana AT1G73590 R-ATH-1122656 AT1G73590 [endosome] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT1G73590 R-ATH-5679312 AT1G73590 [plasma membrane] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT1G73600 R-ATH-8854127 AT1G73600 [cytosol] R-ATH-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119556 Choline biosynthesis I none Arabidopsis thaliana AT1G73690 R-ATH-9640664 AT1G73690 [nucleoplasm] R-ATH-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640760 G1 phase none Arabidopsis thaliana AT1G74040 R-ATH-1127173 AT1G74040 [cytosol] R-ATH-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119540 Leucine biosynthesis none Arabidopsis thaliana AT1G74320 R-ATH-8854108-2 AT1G74320 [cytosol] R-ATH-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119556 Choline biosynthesis I none Arabidopsis thaliana AT1G74380 R-ATH-5655070-2 AT1G74380 [Golgi lumen] R-ATH-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5655101 Xyloglucan biosynthesis none Arabidopsis thaliana AT1G74420 R-ATH-5655076-6 AT1G74420 [Golgi lumen] R-ATH-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5655101 Xyloglucan biosynthesis none Arabidopsis thaliana AT1G74470 R-ATH-1122261 AT1G74470 [plastid stroma] R-ATH-1119602 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119602 Phytyl-PP biosynthesis none Arabidopsis thaliana AT1G74470 R-ATH-1122261 AT1G74470 [plastid stroma] R-ATH-1119605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119605 Chlorophyll a biosynthesis II none Arabidopsis thaliana AT1G74540 R-ATH-1126996 AT1G74540 [cytosol] R-ATH-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119316 Phenylpropanoid biosynthesis none Arabidopsis thaliana AT1G74550 R-ATH-1126996-3 AT1G74550 [cytosol] R-ATH-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119316 Phenylpropanoid biosynthesis none Arabidopsis thaliana AT1G74710 R-ATH-6787276-2 AT1G74710 [plastid stroma] R-ATH-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119261 Salicylate biosynthesis none Arabidopsis thaliana AT1G74710 R-ATH-6787950-2 AT1G74710 [nucleoplasm] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT1G74920 R-ATH-1129514-2 AT1G74920 [chloroplast] R-ATH-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119579 Glycine betaine biosynthesis III none Arabidopsis thaliana AT1G75020 R-ATH-1129208 AT1G75020 [chloroplast envelope] R-ATH-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119402 Phospholipid biosynthesis I none Arabidopsis thaliana AT1G75080 R-ATH-5632334-2 AT1G75080 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G75080 R-ATH-5632197-2 phospho-AT1G75080 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G75080 R-ATH-5632183-2 phospho-AT1G75080 [cytosol] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G75080 R-ATH-5632334-2 AT1G75080 [nucleoplasm] R-ATH-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5679411 Gibberellin signaling none Arabidopsis thaliana AT1G75280 R-ATH-1123717-2 AT1G75280 [cytosol] R-ATH-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119395 Maackiain biosynthesis none Arabidopsis thaliana AT1G75280 R-ATH-1123717-2 AT1G75280 [cytosol] R-ATH-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119453 Medicarpin biosynthesis none Arabidopsis thaliana AT1G75290 R-ATH-1123717-4 AT1G75290 [cytosol] R-ATH-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119395 Maackiain biosynthesis none Arabidopsis thaliana AT1G75290 R-ATH-1123717-4 AT1G75290 [cytosol] R-ATH-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119453 Medicarpin biosynthesis none Arabidopsis thaliana AT1G75300 R-ATH-1123717-3 AT1G75300 [cytosol] R-ATH-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119395 Maackiain biosynthesis none Arabidopsis thaliana AT1G75300 R-ATH-1123717-3 AT1G75300 [cytosol] R-ATH-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119453 Medicarpin biosynthesis none Arabidopsis thaliana AT1G75330 R-ATH-5138486 AT1G75330 [plastid stroma] R-ATH-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119263 Arginine biosynthesis none Arabidopsis thaliana AT1G75330 R-ATH-1123709 AT1G75330 [cytosol] R-ATH-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119318 Proline biosynthesis V (from arginine) none Arabidopsis thaliana AT1G75330 R-ATH-1123709 AT1G75330 [cytosol] R-ATH-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119444 Canavanine biosynthesis none Arabidopsis thaliana AT1G75340 R-ATH-5632143 AT1G75340 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G75340 R-ATH-5632143 AT1G75340 [nucleoplasm] R-ATH-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9924451 Shoot (tiller) formation and regulation of tiller angle none Arabidopsis thaliana AT1G75500 R-ATH-8868961 AT1G75500 [plant-type vacuole membrane] R-ATH-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8868949 Intracellular auxin transport none Arabidopsis thaliana AT1G75540 R-ATH-9826692-2 AT1G75540 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT1G76090 R-ATH-1127899-2 AT1G76090 [cytosol] R-ATH-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119370 Sterol biosynthesis none Arabidopsis thaliana AT1G76490 R-ATH-1124496 AT1G76490 [cytosol] R-ATH-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119615 Mevalonate pathway none Arabidopsis thaliana AT1G76500 R-ATH-9826666-3 AT1G76500 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT1G76520 R-ATH-8868866-3 AT1G76520 [endoplasmic reticulum membrane] R-ATH-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8868949 Intracellular auxin transport none Arabidopsis thaliana AT1G76530 R-ATH-8868866 AT1G76530 [endoplasmic reticulum membrane] R-ATH-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8868949 Intracellular auxin transport none Arabidopsis thaliana AT1G77120 R-ATH-1122242 AT1G77120 [cytosol] R-ATH-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119267 Phenylalanine degradation III none Arabidopsis thaliana AT1G77320 R-ATH-9645941 AT1G77320 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT1G77450 R-ATH-9930308-2 SNAC2 (OsNAC6) [nucleoplasm] R-ATH-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9766881 TF network involved in salinity response none Arabidopsis thaliana AT1G77470 R-ATH-9675818 AT1G77470 [nucleoplasm] R-ATH-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675815 Leading strand synthesis none Arabidopsis thaliana AT1G77590 R-ATH-1125550 AT1G77590 [cytosol] R-ATH-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119623 Acyl-CoA synthetase pathway none Arabidopsis thaliana AT1G77760 R-ATH-1130304 AT1G77760 [cytosol] R-ATH-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119291 Nitrate assimilation none Arabidopsis thaliana AT1G77810 R-ATH-1128319-2 AT1G77810 [cytosol] R-ATH-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119341 Galactosylcyclitol biosynthesis none Arabidopsis thaliana AT1G77850 R-ATH-5608213 AT1G77850 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT1G78390 R-ATH-5221144-3 AT1G78390 [plastid] R-ATH-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119374 Abscisic acid biosynthesis none Arabidopsis thaliana AT1G78510 R-ATH-1123482 AT1G78510 [plastid stroma] R-ATH-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119367 Polyisoprenoid biosynthesis none Arabidopsis thaliana AT1G78580 R-ATH-1126560 AT1G78580 [cytosol] R-ATH-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119516 Trehalose biosynthesis I none Arabidopsis thaliana AT1G78650 R-ATH-9675827 AT1G78650 [nucleoplasm] R-ATH-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675782 Maturation none Arabidopsis thaliana AT1G78650 R-ATH-9675827 AT1G78650 [nucleoplasm] R-ATH-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675815 Leading strand synthesis none Arabidopsis thaliana AT1G78650 R-ATH-9675827 AT1G78650 [nucleoplasm] R-ATH-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675885 Lagging strand synthesis none Arabidopsis thaliana AT1G78660 R-ATH-1123733-2 AT1G78660 [cytosol] R-ATH-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119484 Folate polyglutamylation II none Arabidopsis thaliana AT1G78670 R-ATH-1123733-3 AT1G78670 [cytosol] R-ATH-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119484 Folate polyglutamylation II none Arabidopsis thaliana AT1G78680 R-ATH-1123733 AT1G78680 [cytosol] R-ATH-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119484 Folate polyglutamylation II none Arabidopsis thaliana AT1G78700 R-ATH-5632315 AT1G78700 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G78700 R-ATH-5632284 phospho-AT1G78700 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G78700 R-ATH-5632342 phospho-AT1G78700 [cytosol] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G78700 R-ATH-5632315 AT1G78700 [nucleoplasm] R-ATH-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5679411 Gibberellin signaling none Arabidopsis thaliana AT1G79230 R-ATH-1128626 AT1G79230 [cytosol] R-ATH-1119581 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119581 Thiosulfate disproportionation III (rhodanese) none Arabidopsis thaliana AT1G79230 R-ATH-1128626 AT1G79230 [cytosol] R-ATH-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119612 Cysteine degradation none Arabidopsis thaliana AT1G79370 R-ATH-1130084-3 AT1G79370 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT1G79440 R-ATH-1129846 AT1G79440 [mitochondrion] R-ATH-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119337 Proline degradation none Arabidopsis thaliana AT1G79440 R-ATH-1129846 AT1G79440 [mitochondrion] R-ATH-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119458 Glutamate degradation none Arabidopsis thaliana AT1G79460 R-ATH-1124949 AT1G79460 [plastid stroma] R-ATH-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119308 Momilactone biosynthesis none Arabidopsis thaliana AT1G79460 R-ATH-1124949 AT1G79460 [plastid stroma] R-ATH-1119328 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119328 Oleoresin sesquiterpene volatiles biosynthesis none Arabidopsis thaliana AT1G79460 R-ATH-1129421 AT1G79460 [chloroplast] R-ATH-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119348 Ent-kaurene biosynthesis none Arabidopsis thaliana AT1G79460 R-ATH-1124949 AT1G79460 [plastid stroma] R-ATH-1119371 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119371 Oryzalexin A-F biosynthesis none Arabidopsis thaliana AT1G79460 R-ATH-1124949 AT1G79460 [plastid stroma] R-ATH-1119521 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119521 Oryzalexin S biosynthesis none Arabidopsis thaliana AT1G79460 R-ATH-1129220 AT1G79460 [cytosol] R-ATH-1119583 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119583 Phytocassane biosynthesis none Arabidopsis thaliana AT1G79460 R-ATH-9610718 AT1G79460 [plastid stroma] R-ATH-9610720 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9610720 Oryzalide A biosynthesis none Arabidopsis thaliana AT1G79470 R-ATH-1123404-2 AT1G79470 [peroxisomal matrix] R-ATH-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119407 Ureide biosynthesis none Arabidopsis thaliana AT1G79500 R-ATH-1127527-2 AT1G79500 [cytosol] R-ATH-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Arabidopsis thaliana AT1G79530 R-ATH-1125920-2 AT1G79530 [cytosol] R-ATH-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119273 Lysine biosynthesis I none Arabidopsis thaliana AT1G79530 R-ATH-1125920-2 AT1G79530 [cytosol] R-ATH-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119283 Lysine biosynthesis II none Arabidopsis thaliana AT1G79550 R-ATH-5149657 AT1G79550 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT1G79550 R-ATH-1129239 AT1G79550 [cytosol] R-ATH-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119570 Cytosolic glycolysis none Arabidopsis thaliana AT1G80190 R-ATH-9675849 AT1G80190 [nucleoplasm] R-ATH-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675824 DNA replication Initiation none Arabidopsis thaliana AT1G80380 R-ATH-8987467 AT1G80380 [chloroplast] R-ATH-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119502 Allantoin degradation none Arabidopsis thaliana AT1G80460 R-ATH-1126860 AT1G80460 [cytosol] R-ATH-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119321 Glycerol degradation I none Arabidopsis thaliana AT1G80490 R-ATH-5632157 AT1G80490 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT1G80490 R-ATH-5632157 AT1G80490 [nucleoplasm] R-ATH-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5654828 Strigolactone signaling none Arabidopsis thaliana AT1G80600 R-ATH-5138505 AT1G80600 [plastid stroma] R-ATH-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119263 Arginine biosynthesis none Arabidopsis thaliana AT1G80600 R-ATH-5138505 AT1G80600 [plastid stroma] R-ATH-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119539 Ornithine biosynthesis none Arabidopsis thaliana AT1G80600 R-ATH-5138505 AT1G80600 [plastid stroma] R-ATH-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119622 Arginine biosynthesis II (acetyl cycle) none Arabidopsis thaliana AT1G80820 R-ATH-1128200 AT1G80820 [cytosol] R-ATH-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119316 Phenylpropanoid biosynthesis none Arabidopsis thaliana AT1G80840 R-ATH-6787933 AT1G80840 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT2G01120 R-ATH-9640785 AT2G01120 [nucleoplasm] R-ATH-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640882 Assembly of pre-replication complex none Arabidopsis thaliana AT2G01120 R-ATH-9640785 AT2G01120 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT2G01140 R-ATH-5149676 AT2G01140 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT2G01290 R-ATH-1126320-2 AT2G01290 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT2G01350 R-ATH-1123525 AT2G01350 [cytosol] R-ATH-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119384 NAD biosynthesis I (from aspartate) none Arabidopsis thaliana AT2G01420 R-ATH-1128126-3 AT2G01420 [endosome] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT2G01420 R-ATH-5679348-3 AT2G01420 [plasma membrane] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT2G01570 R-ATH-5679455-2 AT2G01570 [nucleoplasm] R-ATH-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5679411 Gibberellin signaling none Arabidopsis thaliana AT2G01570 R-ATH-6787020-2 AT2G01570 [cytosol] R-ATH-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6787011 Jasmonic acid signaling none Arabidopsis thaliana AT2G01940 R-ATH-5679470 AT2G01940 [nucleoplasm] R-ATH-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5679411 Gibberellin signaling none Arabidopsis thaliana AT2G02070 R-ATH-5679402-2 AT2G02070 [nucleoplasm] R-ATH-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5679411 Gibberellin signaling none Arabidopsis thaliana AT2G02080 R-ATH-5679402 AT2G02080 [nucleoplasm] R-ATH-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5679411 Gibberellin signaling none Arabidopsis thaliana AT2G02380 R-ATH-1127353 AT2G02380 [cytosol] R-ATH-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119506 tyrosine degradation I none Arabidopsis thaliana AT2G02390 R-ATH-1127353-2 AT2G02390 [cytosol] R-ATH-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119506 tyrosine degradation I none Arabidopsis thaliana AT2G02500 R-ATH-1124242 AT2G02500 [plastid stroma] R-ATH-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119464 Methylerythritol phosphate pathway none Arabidopsis thaliana AT2G03210 R-ATH-5655076-2 AT2G03210 [Golgi lumen] R-ATH-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5655101 Xyloglucan biosynthesis none Arabidopsis thaliana AT2G03220 R-ATH-5655076-7 AT2G03220 [Golgi lumen] R-ATH-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5655101 Xyloglucan biosynthesis none Arabidopsis thaliana AT2G04032 R-ATH-9025728 AT2G04032 [plasma membrane] R-ATH-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9025727 Iron uptake and transport in root vascular system none Arabidopsis thaliana AT2G04350 R-ATH-1124959 AT2G04350 [cytosol] R-ATH-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119623 Acyl-CoA synthetase pathway none Arabidopsis thaliana AT2G04400 R-ATH-1123161-2 AT2G04400 [chloroplast] R-ATH-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119494 Tryptophan biosynthesis none Arabidopsis thaliana AT2G04560 R-ATH-1124083 AT2G04560 [cytosol] R-ATH-1119323 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119323 Lipid-A-precursor biosynthesis none Arabidopsis thaliana AT2G05830 R-ATH-5084918 AT2G05830 [cytosol] R-ATH-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119624 Methionine salvage pathway none Arabidopsis thaliana AT2G06050 R-ATH-1130153 AT2G06050 [cytosol] R-ATH-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119332 Jasmonic acid biosynthesis none Arabidopsis thaliana AT2G06050 R-ATH-6787115 AT2G06050 [nucleoplasm] R-ATH-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6787011 Jasmonic acid signaling none Arabidopsis thaliana AT2G06925 R-ATH-1126513 AT2G06925 [cytosol] R-ATH-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119332 Jasmonic acid biosynthesis none Arabidopsis thaliana AT2G07690 R-ATH-9640704 AT2G07690 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT2G07690 R-ATH-9640704 AT2G07690 [nucleoplasm] R-ATH-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675824 DNA replication Initiation none Arabidopsis thaliana AT2G13360 R-ATH-8987571 AT2G13360 [peroxisomal matrix] R-ATH-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119312 Photorespiration none Arabidopsis thaliana AT2G13560 R-ATH-5146760 AT2G13560 [mitochondrial matrix] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT2G13810 R-ATH-5606521 AT2G13810 [plastid stroma] R-ATH-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119419 Lysine biosynthesis VI none Arabidopsis thaliana AT2G14170 R-ATH-1126269 AT2G14170 [mitochondrial matrix] R-ATH-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119479 Valine degradation none Arabidopsis thaliana AT2G15350 R-ATH-5655076-3 AT2G15350 [Golgi lumen] R-ATH-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5655101 Xyloglucan biosynthesis none Arabidopsis thaliana AT2G15370 R-ATH-5655076-9 AT2G15370 [Golgi lumen] R-ATH-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5655101 Xyloglucan biosynthesis none Arabidopsis thaliana AT2G15390 R-ATH-5655076 AT2G15390 [Golgi lumen] R-ATH-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5655101 Xyloglucan biosynthesis none Arabidopsis thaliana AT2G16440 R-ATH-9640761 AT2G16440 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT2G16440 R-ATH-9640761 AT2G16440 [nucleoplasm] R-ATH-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675824 DNA replication Initiation none Arabidopsis thaliana AT2G16500 R-ATH-1123832 AT2G16500 [cytosol] R-ATH-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119304 Putrescine biosynthesis II none Arabidopsis thaliana AT2G16500 R-ATH-1123832 AT2G16500 [cytosol] R-ATH-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119447 Putrescine biosynthesis I none Arabidopsis thaliana AT2G16530 R-ATH-1125093 AT2G16530 [cytosol] R-ATH-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119456 Brassinosteroid biosynthesis II none Arabidopsis thaliana AT2G16850 R-ATH-9618156-2 AT2G16850 [plasma membrane] R-ATH-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9618218 Arsenic uptake and detoxification none Arabidopsis thaliana AT2G17265 R-ATH-1125974 AT2G17265 [cytosol] R-ATH-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119262 Threonine biosynthesis from homoserine none Arabidopsis thaliana AT2G17265 R-ATH-1125974 AT2G17265 [cytosol] R-ATH-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119400 Methionine biosynthesis II none Arabidopsis thaliana AT2G17290 R-ATH-5221147 AT2G17290 [cytosol] R-ATH-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis thaliana AT2G17320 R-ATH-1130152-2 AT2G17320 [cytosol] R-ATH-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119394 Pantothenate and coenzyme A biosynthesis III none Arabidopsis thaliana AT2G17340 R-ATH-1130152-3 AT2G17340 [cytosol] R-ATH-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119394 Pantothenate and coenzyme A biosynthesis III none Arabidopsis thaliana AT2G17370 R-ATH-1124496-2 AT2G17370 [cytosol] R-ATH-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119615 Mevalonate pathway none Arabidopsis thaliana AT2G17500 R-ATH-8868994-2 AT2G17500 [endoplasmic reticulum membrane] R-ATH-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8868949 Intracellular auxin transport none Arabidopsis thaliana AT2G17570 R-ATH-1125910-2 AT2G17570 [plastid stroma] R-ATH-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119367 Polyisoprenoid biosynthesis none Arabidopsis thaliana AT2G17640 R-ATH-1128641 AT2G17640 [cytosol] R-ATH-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119331 Cysteine biosynthesis I none Arabidopsis thaliana AT2G17850 R-ATH-9618057-2 AT2G17850 [cytosol] R-ATH-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9618218 Arsenic uptake and detoxification none Arabidopsis thaliana AT2G18180 R-ATH-9639957 AT2G18180 [plasma membrane] R-ATH-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639861 Development of root hair none Arabidopsis thaliana AT2G18280 R-ATH-9916252-2 OsEGT1 [nucleoplasm] R-ATH-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9916190 Root angle formation: elongation and curvature response none Arabidopsis thaliana AT2G18360 R-ATH-1127815 AT2G18360 [cytosol] R-ATH-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119450 Homocysteine biosynthesis none Arabidopsis thaliana AT2G18450 R-ATH-1129247-2 AT2G18450 [mitochondrial inner membrane] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT2G18550 R-ATH-9826620-3 HOX12/ OsGT1 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT2G18550 R-ATH-9826620-3 HOX12/ OsGT1 [nucleoplasm] R-ATH-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Arabidopsis thaliana AT2G18700 R-ATH-1123210 AT2G18700 [cytosol] R-ATH-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119516 Trehalose biosynthesis I none Arabidopsis thaliana AT2G18790 R-ATH-8933856 AT2G18790 [nucleoplasm] R-ATH-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8933811 Circadian rhythm none Arabidopsis thaliana AT2G18790 R-ATH-8933748 AT2G18790 [cytosol] R-ATH-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8933811 Circadian rhythm none Arabidopsis thaliana AT2G18790 R-ATH-8933856 AT2G18790 [nucleoplasm] R-ATH-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934036 Long day regulated expression of florigens none Arabidopsis thaliana AT2G18790 R-ATH-8933856 AT2G18790 [nucleoplasm] R-ATH-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9928995 Drought escape (DE) via ABA-dependent pathway none Arabidopsis thaliana AT2G19800 R-ATH-1127523-3 AT2G19800 [cytosol] R-ATH-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Arabidopsis thaliana AT2G19940 R-ATH-5138500 AT2G19940 [plastid stroma] R-ATH-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119263 Arginine biosynthesis none Arabidopsis thaliana AT2G19940 R-ATH-1129397 AT2G19940 [cytosol] R-ATH-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119273 Lysine biosynthesis I none Arabidopsis thaliana AT2G19940 R-ATH-1129397 AT2G19940 [cytosol] R-ATH-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119283 Lysine biosynthesis II none Arabidopsis thaliana AT2G19940 R-ATH-1129397 AT2G19940 [cytosol] R-ATH-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119295 Homoserine biosynthesis none Arabidopsis thaliana AT2G19940 R-ATH-5138500 AT2G19940 [plastid stroma] R-ATH-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119539 Ornithine biosynthesis none Arabidopsis thaliana AT2G19940 R-ATH-5138500 AT2G19940 [plastid stroma] R-ATH-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119622 Arginine biosynthesis II (acetyl cycle) none Arabidopsis thaliana AT2G20340 R-ATH-1122881-2 AT2G20340 [cytosol] R-ATH-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Arabidopsis thaliana AT2G20340 R-ATH-1122881-2 AT2G20340 [cytosol] R-ATH-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119438 Secologanin and strictosidine biosynthesis none Arabidopsis thaliana AT2G20340 R-ATH-1122881-2 AT2G20340 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT2G20370 R-ATH-5655057 AT2G20370 [Golgi lumen] R-ATH-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5655101 Xyloglucan biosynthesis none Arabidopsis thaliana AT2G20420 R-ATH-1129896 AT2G20420 [mitochondrial matrix] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT2G20610 R-ATH-1129547-5 AT2G20610 [cytosol] R-ATH-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119389 Phenylalanine biosynthesis I none Arabidopsis thaliana AT2G20610 R-ATH-1129547-5 AT2G20610 [cytosol] R-ATH-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119400 Methionine biosynthesis II none Arabidopsis thaliana AT2G20610 R-ATH-1129547-5 AT2G20610 [cytosol] R-ATH-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119506 tyrosine degradation I none Arabidopsis thaliana AT2G20980 R-ATH-9645954 AT2G20980 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT2G21130 R-ATH-9675293-2 AT2G21130 [nucleoplasm] R-ATH-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030557 Lateral root initiation none Arabidopsis thaliana AT2G21170 R-ATH-1128877 AT2G21170 [plastid stroma] R-ATH-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119424 Plastid glycolysis none Arabidopsis thaliana AT2G21170 R-ATH-1128877 AT2G21170 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT2G21550 R-ATH-1125417 AT2G21550 [cytosol] R-ATH-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119265 Tetrahydrofolate biosynthesis I none Arabidopsis thaliana AT2G21550 R-ATH-1125417 AT2G21550 [cytosol] R-ATH-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119523 Tetrahydrofolate biosynthesis II none Arabidopsis thaliana AT2G21590 R-ATH-1127562 AT2G21590 [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT2G21590 R-ATH-1130466 AT2G21590 [cytosol] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT2G21860 R-ATH-1129466 AT2G21860 [cytosol] R-ATH-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119449 Carotenoid biosynthesis none Arabidopsis thaliana AT2G21940 R-ATH-1130308 AT2G21940 [plastid stroma] R-ATH-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119430 Chorismate biosynthesis none Arabidopsis thaliana AT2G22240 R-ATH-1129964-2 AT2G22240 [cytosol] R-ATH-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119378 Myo-inositol biosynthesis none Arabidopsis thaliana AT2G22240 R-ATH-1129964-2 AT2G22240 [cytosol] R-ATH-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119434 Phytic acid biosynthesis (lipid-independent) none Arabidopsis thaliana AT2G22250 R-ATH-5654756 AT2G22250 [cytosol] R-ATH-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119281 Aspartate biosynthesis I none Arabidopsis thaliana AT2G22250 R-ATH-1123648 AT2G22250 [plastid] R-ATH-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119506 tyrosine degradation I none Arabidopsis thaliana AT2G22250 R-ATH-5631992 AT2G22250 [plastid stroma] R-ATH-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119553 Asparagine biosynthesis none Arabidopsis thaliana AT2G22330 R-ATH-1130084-2 AT2G22330 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT2G22450 R-ATH-1128950-2 AT2G22450 [cytosol] R-ATH-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119379 Flavin biosynthesis none Arabidopsis thaliana AT2G22490 R-ATH-9640777 AT2G22490 [nucleoplasm] R-ATH-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640760 G1 phase none Arabidopsis thaliana AT2G22490 R-ATH-9640777 AT2G22490 [nucleoplasm] R-ATH-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640887 G1/S transition none Arabidopsis thaliana AT2G22810 R-ATH-1123895 AT2G22810 [cytosol] R-ATH-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119334 Ethylene biosynthesis from methionine none Arabidopsis thaliana AT2G22810 R-ATH-1123895 AT2G22810 [cytosol] R-ATH-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119624 Methionine salvage pathway none Arabidopsis thaliana AT2G22840 R-ATH-9035593 AT2G22840 [cytosol] R-ATH-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9035605 Regulation of seed size none Arabidopsis thaliana AT2G22840 R-ATH-9035634 AT2G22840 [nucleoplasm] R-ATH-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9035605 Regulation of seed size none Arabidopsis thaliana AT2G22840 R-ATH-9035593 AT2G22840 [cytosol] R-ATH-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9608575 Reproductive meristem phase change none Arabidopsis thaliana AT2G22840 R-ATH-9035634 AT2G22840 [nucleoplasm] R-ATH-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9608575 Reproductive meristem phase change none Arabidopsis thaliana AT2G22900 R-ATH-5655075 AT2G22900 [Golgi lumen] R-ATH-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5655101 Xyloglucan biosynthesis none Arabidopsis thaliana AT2G22910 R-ATH-9658611-2 AT2G22910 [plastid stroma] R-ATH-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119263 Arginine biosynthesis none Arabidopsis thaliana AT2G22910 R-ATH-9658611-2 AT2G22910 [plastid stroma] R-ATH-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119539 Ornithine biosynthesis none Arabidopsis thaliana AT2G22910 R-ATH-9658611-2 AT2G22910 [plastid stroma] R-ATH-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119622 Arginine biosynthesis II (acetyl cycle) none Arabidopsis thaliana AT2G23070 R-ATH-8933816 AT2G23070 [nucleoplasm] R-ATH-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8933811 Circadian rhythm none Arabidopsis thaliana AT2G23340 R-ATH-8879009-6 AT2G23340 [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT2G24490 R-ATH-9645872 AT2G24490 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT2G24570 R-ATH-6788065-2 AT2G24570 [nucleoplasm] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT2G24850 R-ATH-1129547-8 AT2G24850 [cytosol] R-ATH-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119389 Phenylalanine biosynthesis I none Arabidopsis thaliana AT2G24850 R-ATH-1129547-8 AT2G24850 [cytosol] R-ATH-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119400 Methionine biosynthesis II none Arabidopsis thaliana AT2G24850 R-ATH-1129547-8 AT2G24850 [cytosol] R-ATH-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119506 tyrosine degradation I none Arabidopsis thaliana AT2G25000 R-ATH-6787933-2 AT2G25000 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT2G25080 R-ATH-1128173-2 AT2G25080 [cytosol] R-ATH-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119437 Glutathione redox reactions I none Arabidopsis thaliana AT2G25300 R-ATH-1129485 AT2G25300 [cytosol] R-ATH-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119341 Galactosylcyclitol biosynthesis none Arabidopsis thaliana AT2G25520 R-ATH-9681915-2 AT2G25520 [Golgi membrane] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT2G25540 R-ATH-1130088 AT2G25540 [plasma membrane] R-ATH-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119314 Cellulose biosynthesis none Arabidopsis thaliana AT2G26080 R-ATH-8987557 AT2G26080 [mitochondrial matrix] R-ATH-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119312 Photorespiration none Arabidopsis thaliana AT2G26170 R-ATH-5367743 AT2G26170 [cytosol] R-ATH-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5367729 Strigolactone biosynthesis none Arabidopsis thaliana AT2G26230 R-ATH-1124453 AT2G26230 [peroxisomal matrix] R-ATH-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119407 Ureide biosynthesis none Arabidopsis thaliana AT2G26480 R-ATH-1123470-3 AT2G26480 [cytosol] R-ATH-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis thaliana AT2G26480 R-ATH-1123470-3 AT2G26480 [cytosol] R-ATH-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis thaliana AT2G26480 R-ATH-1123470-3 AT2G26480 [cytosol] R-ATH-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis thaliana AT2G26540 R-ATH-4827040 AT2G26540 [plastid stroma] R-ATH-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-4827054 Tetrapyrrole biosynthesis I none Arabidopsis thaliana AT2G26830 R-ATH-8854102 AT2G26830 [cytosol] R-ATH-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119556 Choline biosynthesis I none Arabidopsis thaliana AT2G26930 R-ATH-4723690 AT2G26930 [plastid stroma] R-ATH-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119464 Methylerythritol phosphate pathway none Arabidopsis thaliana AT2G26980 R-ATH-9927865 AT2G26980 [nucleoplasm] R-ATH-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934257 Transition from vegetative to reproductive shoot apical meristem none Arabidopsis thaliana AT2G27150 R-ATH-1250418 AT2G27150 [cytosol] R-ATH-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119374 Abscisic acid biosynthesis none Arabidopsis thaliana AT2G27150 R-ATH-1129637-2 AT2G27150 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT2G27210 R-ATH-5632111-2 AT2G27210 [cytosol] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT2G27210 R-ATH-5632216-2 phospho-AT2G27210 [cytosol] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT2G27210 R-ATH-5632145-2 phospho-AT2G27210 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT2G27450 R-ATH-1127065 AT2G27450 [cytosol] R-ATH-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119304 Putrescine biosynthesis II none Arabidopsis thaliana AT2G27550 R-ATH-9608694 AT2G27550 [cytosol] R-ATH-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9928831 Severe drought none Arabidopsis thaliana AT2G27550 R-ATH-9928774 AT2G27550 [nucleoplasm] R-ATH-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9928831 Severe drought none Arabidopsis thaliana AT2G27860 R-ATH-1124560-2 AT2G27860 [cytosol] R-ATH-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119563 UDP-D-xylose biosynthesis none Arabidopsis thaliana AT2G27860 R-ATH-9681903-2 AT2G27860 [Golgi lumen] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT2G27860 R-ATH-1124560-2 AT2G27860 [cytosol] R-ATH-5654894 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5654894 UDP-D-apiose biosynthesis none Arabidopsis thaliana AT2G28190 R-ATH-1126828 AT2G28190 [plastid] R-ATH-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119403 Removal of superoxide radicals none Arabidopsis thaliana AT2G28350 R-ATH-5608161-2 AT2G28350 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT2G28550 R-ATH-9608682 AT2G28550 [nucleoplasm] R-ATH-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934036 Long day regulated expression of florigens none Arabidopsis thaliana AT2G28550 R-ATH-9608682 AT2G28550 [nucleoplasm] R-ATH-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9608575 Reproductive meristem phase change none Arabidopsis thaliana AT2G28550 R-ATH-9608606 AT2G28550 [cytosol] R-ATH-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9608575 Reproductive meristem phase change none Arabidopsis thaliana AT2G28760 R-ATH-1126799-3 AT2G28760 [cytosol] R-ATH-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis thaliana AT2G28760 R-ATH-1126799-3 AT2G28760 [cytosol] R-ATH-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119563 UDP-D-xylose biosynthesis none Arabidopsis thaliana AT2G28760 R-ATH-1126799-3 AT2G28760 [cytosol] R-ATH-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis thaliana AT2G28830 R-ATH-9611510-2 phospho-phosphorylated-SPL11 [plasma membrane] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT2G28830 R-ATH-9611544-2 SPL11 [nucleoplasm] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT2G28830 R-ATH-9611440-2 phospho-phosphorylated-SPL11 [nucleoplasm] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT2G28930 R-ATH-9611528 RLCK176 [cytosol] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT2G28930 R-ATH-9611477 phospho-phosphorylated-RLCK176 [cytosol] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT2G29380 R-ATH-4415078-3 AT2G29380 [cytosol] R-ATH-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis thaliana AT2G29390 R-ATH-1127539-2 AT2G29390 [cytosol] R-ATH-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Arabidopsis thaliana AT2G29390 R-ATH-1127539-2 AT2G29390 [cytosol] R-ATH-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119439 Cholesterol biosynthesis III (via desmosterol) none Arabidopsis thaliana AT2G29390 R-ATH-1127539-2 AT2G29390 [cytosol] R-ATH-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119559 Cholesterol biosynthesis I none Arabidopsis thaliana AT2G29570 R-ATH-9640689-2 AT2G29570 [nucleoplasm] R-ATH-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675782 Maturation none Arabidopsis thaliana AT2G29570 R-ATH-9640689-2 AT2G29570 [nucleoplasm] R-ATH-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675815 Leading strand synthesis none Arabidopsis thaliana AT2G29570 R-ATH-9640689-2 AT2G29570 [nucleoplasm] R-ATH-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675885 Lagging strand synthesis none Arabidopsis thaliana AT2G29680 R-ATH-9640886 AT2G29680 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT2G29690 R-ATH-1123998-2 AT2G29690 [chloroplast] R-ATH-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119494 Tryptophan biosynthesis none Arabidopsis thaliana AT2G29970 R-ATH-5654797-2 AT2G29970 [nucleoplasm] R-ATH-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5654828 Strigolactone signaling none Arabidopsis thaliana AT2G29980 R-ATH-1125804 AT2G29980 [cytosol] R-ATH-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119300 Glycolipid desaturation none Arabidopsis thaliana AT2G30340 R-ATH-9675399-2 AT2G30340 [nucleoplasm] R-ATH-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030654 Primary root development none Arabidopsis thaliana AT2G30490 R-ATH-1127076 AT2G30490 [cytosol] R-ATH-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119418 Suberin biosynthesis none Arabidopsis thaliana AT2G30490 R-ATH-1127076 AT2G30490 [cytosol] R-ATH-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119582 Phenylpropanoid biosynthesis, initial reactions none Arabidopsis thaliana AT2G30970 R-ATH-1127442 AT2G30970 [cytosol] R-ATH-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119281 Aspartate biosynthesis I none Arabidopsis thaliana AT2G30970 R-ATH-5632001 AT2G30970 [plastid stroma] R-ATH-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119553 Asparagine biosynthesis none Arabidopsis thaliana AT2G30980 R-ATH-5632139-2 AT2G30980 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT2G31570 R-ATH-1123430 AT2G31570 [cytosol] R-ATH-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119437 Glutathione redox reactions I none Arabidopsis thaliana AT2G31650 R-ATH-9927723 AT2G31650 [nucleoplasm] R-ATH-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934036 Long day regulated expression of florigens none Arabidopsis thaliana AT2G31810 R-ATH-1124523 AT2G31810 [cytosol] R-ATH-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119460 Isoleucine biosynthesis from threonine none Arabidopsis thaliana AT2G31810 R-ATH-1124523 AT2G31810 [cytosol] R-ATH-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119600 Valine biosynthesis none Arabidopsis thaliana AT2G32260 R-ATH-1125187 AT2G32260 [cytosol] R-ATH-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119276 Choline biosynthesis III none Arabidopsis thaliana AT2G32440 R-ATH-1125766 AT2G32440 [cytosol] R-ATH-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119557 GA12 biosynthesis none Arabidopsis thaliana AT2G32950 R-ATH-8933714 AT2G32950 [nucleoplasm] R-ATH-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8933811 Circadian rhythm none Arabidopsis thaliana AT2G33100 R-ATH-1124613 AT2G33100 [plasma membrane] R-ATH-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119314 Cellulose biosynthesis none Arabidopsis thaliana AT2G33310 R-ATH-1128385 AT2G33310 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT2G33810 R-ATH-9035727-2 AT2G33810 [cytosol] R-ATH-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9035605 Regulation of seed size none Arabidopsis thaliana AT2G33810 R-ATH-9035692-2 AT2G33810 [nucleoplasm] R-ATH-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9035605 Regulation of seed size none Arabidopsis thaliana AT2G33860 R-ATH-5608184 AT2G33860 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT2G33860 R-ATH-5608184 AT2G33860 [nucleoplasm] R-ATH-9675304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675304 Lateral root emergence none Arabidopsis thaliana AT2G34390 R-ATH-9618197-4 AT2G34390 [plasma membrane] R-ATH-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9618218 Arsenic uptake and detoxification none Arabidopsis thaliana AT2G34660 R-ATH-9618186 AT2G34660 [plant-type vacuole membrane] R-ATH-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9618218 Arsenic uptake and detoxification none Arabidopsis thaliana AT2G34850 R-ATH-1125489-4 AT2G34850 [Golgi membrane] R-ATH-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis thaliana AT2G34850 R-ATH-1127743-4 AT2G34850 [cytosol] R-ATH-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis thaliana AT2G34850 R-ATH-1125489-4 AT2G34850 [Golgi membrane] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT2G34850 R-ATH-1125489-4 AT2G34850 [Golgi membrane] R-ATH-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis thaliana AT2G34850 R-ATH-1127743-4 AT2G34850 [cytosol] R-ATH-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis thaliana AT2G35120 R-ATH-8987483 AT2G35120 [mitochondrial matrix] R-ATH-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119312 Photorespiration none Arabidopsis thaliana AT2G35370 R-ATH-8987554 AT2G35370 [mitochondrial matrix] R-ATH-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119312 Photorespiration none Arabidopsis thaliana AT2G35500 R-ATH-1127989 AT2G35500 [plastid stroma] R-ATH-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119430 Chorismate biosynthesis none Arabidopsis thaliana AT2G35840 R-ATH-1127089-3 AT2G35840 [cytosol] R-ATH-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119465 Sucrose biosynthesis none Arabidopsis thaliana AT2G35990 R-ATH-9608693-2 AT2G35990 [cytosol] R-ATH-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9608575 Reproductive meristem phase change none Arabidopsis thaliana AT2G36010 R-ATH-9640739-2 AT2G36010 [nucleoplasm] R-ATH-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640887 G1/S transition none Arabidopsis thaliana AT2G36230 R-ATH-1123337 AT2G36230 [plastid stroma] R-ATH-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119509 Histidine biosynthesis I none Arabidopsis thaliana AT2G36270 R-ATH-9930216 ABI5 [nucleoplasm] R-ATH-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9766881 TF network involved in salinity response none Arabidopsis thaliana AT2G36360 R-ATH-9626474 AT2G36360 [trans-Golgi network membrane] R-ATH-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9626305 Regulatory network of nutrient accumulation none Arabidopsis thaliana AT2G36390 R-ATH-1124067 AT2G36390 [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT2G36390 R-ATH-9626520 AT2G36390 [plastid stroma] R-ATH-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9626305 Regulatory network of nutrient accumulation none Arabidopsis thaliana AT2G36460 R-ATH-5149646-3 AT2G36460 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT2G36460 R-ATH-1126652-3 AT2G36460 [cytosol] R-ATH-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119570 Cytosolic glycolysis none Arabidopsis thaliana AT2G36500 R-ATH-1126955-2 AT2G36500 [plastid] R-ATH-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119407 Ureide biosynthesis none Arabidopsis thaliana AT2G37040 R-ATH-1130235 AT2G37040 [cytosol] R-ATH-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119261 Salicylate biosynthesis none Arabidopsis thaliana AT2G37040 R-ATH-1130235 AT2G37040 [cytosol] R-ATH-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119418 Suberin biosynthesis none Arabidopsis thaliana AT2G37040 R-ATH-1130235 AT2G37040 [cytosol] R-ATH-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119582 Phenylpropanoid biosynthesis, initial reactions none Arabidopsis thaliana AT2G37090 R-ATH-5654933 AT2G37090 [Golgi lumen] R-ATH-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5654909 Xylan biosynthesis none Arabidopsis thaliana AT2G37170 R-ATH-9618056-4 AT2G37170 [plasma membrane] R-ATH-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9618218 Arsenic uptake and detoxification none Arabidopsis thaliana AT2G37180 R-ATH-9618056-2 AT2G37180 [plasma membrane] R-ATH-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9618218 Arsenic uptake and detoxification none Arabidopsis thaliana AT2G37330 R-ATH-9639217 AT2G37330 [plasma membrane] R-ATH-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639136 Response to Aluminum stress none Arabidopsis thaliana AT2G37500 R-ATH-9658613 AT2G37500 [plastid stroma] R-ATH-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119263 Arginine biosynthesis none Arabidopsis thaliana AT2G37500 R-ATH-9658613 AT2G37500 [plastid stroma] R-ATH-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119622 Arginine biosynthesis II (acetyl cycle) none Arabidopsis thaliana AT2G37560 R-ATH-9640701 AT2G37560 [nucleoplasm] R-ATH-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640882 Assembly of pre-replication complex none Arabidopsis thaliana AT2G37560 R-ATH-9640701 AT2G37560 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT2G37690 R-ATH-1125698 AT2G37690 [cytosol] R-ATH-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119436 Peptidoglycan biosynthesis I none Arabidopsis thaliana AT2G38050 R-ATH-1124269 AT2G38050 [cytosol] R-ATH-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119456 Brassinosteroid biosynthesis II none Arabidopsis thaliana AT2G38400 R-ATH-1129539 AT2G38400 [cytosol] R-ATH-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119610 Biotin biosynthesis II none Arabidopsis thaliana AT2G38700 R-ATH-1126436-2 AT2G38700 [cytosol] R-ATH-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119615 Mevalonate pathway none Arabidopsis thaliana AT2G39290 R-ATH-1130032-2 AT2G39290 [mitochondrial inner membrane] R-ATH-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119260 Cardiolipin biosynthesis none Arabidopsis thaliana AT2G39800 R-ATH-1127913-2 AT2G39800 [cytosol] R-ATH-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119495 Citrulline biosynthesis none Arabidopsis thaliana AT2G39800 R-ATH-1127913-2 AT2G39800 [cytosol] R-ATH-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119631 Proline biosynthesis I none Arabidopsis thaliana AT2G39930 R-ATH-9918265 ISA1 [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT2G39930 R-ATH-9626527 AT2G39930 [plastid stroma] R-ATH-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9626305 Regulatory network of nutrient accumulation none Arabidopsis thaliana AT2G39940 R-ATH-6787181 AT2G39940 [cytosol] R-ATH-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6787011 Jasmonic acid signaling none Arabidopsis thaliana AT2G40130 R-ATH-5654797-3 AT2G40130 [nucleoplasm] R-ATH-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5654828 Strigolactone signaling none Arabidopsis thaliana AT2G40470 R-ATH-9675399 AT2G40470 [nucleoplasm] R-ATH-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030654 Primary root development none Arabidopsis thaliana AT2G40890 R-ATH-1126996-2 AT2G40890 [cytosol] R-ATH-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119316 Phenylpropanoid biosynthesis none Arabidopsis thaliana AT2G41290 R-ATH-1122326 AT2G41290 [cytosol] R-ATH-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119438 Secologanin and strictosidine biosynthesis none Arabidopsis thaliana AT2G41490 R-ATH-1129311 AT2G41490 [cytosol] R-ATH-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Arabidopsis thaliana AT2G41540 R-ATH-9025331 AT2G41540 [cytosol] R-ATH-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119402 Phospholipid biosynthesis I none Arabidopsis thaliana AT2G41690 R-ATH-6787864 AT2G41690 [nucleoplasm] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT2G42120 R-ATH-9675876 AT2G42120 [nucleoplasm] R-ATH-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675782 Maturation none Arabidopsis thaliana AT2G42120 R-ATH-9675876 AT2G42120 [nucleoplasm] R-ATH-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675815 Leading strand synthesis none Arabidopsis thaliana AT2G42120 R-ATH-9675876 AT2G42120 [nucleoplasm] R-ATH-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675885 Lagging strand synthesis none Arabidopsis thaliana AT2G42490 R-ATH-9658676 AT2G42490 [cytosol] R-ATH-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119567 Beta-alanine biosynthesis I none Arabidopsis thaliana AT2G42500 R-ATH-5632241-2 AT2G42500 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT2G42620 R-ATH-5654840 AT2G42620 [nucleoplasm] R-ATH-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5654828 Strigolactone signaling none Arabidopsis thaliana AT2G42620 R-ATH-5654840 AT2G42620 [nucleoplasm] R-ATH-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Arabidopsis thaliana AT2G42830 R-ATH-8986675-2 AT2G42830 [nucleoplasm] R-ATH-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9609102 Flower development none Arabidopsis thaliana AT2G42910 R-ATH-1123092 AT2G42910 [cytosol] R-ATH-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119278 PRPP biosynthesis I none Arabidopsis thaliana AT2G43010 R-ATH-5632110 AT2G43010 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT2G43010 R-ATH-5632110 AT2G43010 [nucleoplasm] R-ATH-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5679411 Gibberellin signaling none Arabidopsis thaliana AT2G43090 R-ATH-1124032 AT2G43090 [cytosol] R-ATH-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119540 Leucine biosynthesis none Arabidopsis thaliana AT2G43100 R-ATH-1124032-2 AT2G43100 [cytosol] R-ATH-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119540 Leucine biosynthesis none Arabidopsis thaliana AT2G43350 R-ATH-1123430-2 AT2G43350 [cytosol] R-ATH-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119437 Glutathione redox reactions I none Arabidopsis thaliana AT2G43360 R-ATH-1124791 AT2G43360 [cytosol] R-ATH-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119610 Biotin biosynthesis II none Arabidopsis thaliana AT2G43750 R-ATH-1122545 AT2G43750 [cytosol] R-ATH-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119331 Cysteine biosynthesis I none Arabidopsis thaliana AT2G43790 R-ATH-9675391 AT2G43790 [nucleoplasm] R-ATH-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675508 Root elongation none Arabidopsis thaliana AT2G43800 R-ATH-9639789-3 AT2G43800 [plasma membrane] R-ATH-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639861 Development of root hair none Arabidopsis thaliana AT2G43980 R-ATH-9639010 AT2G43980 [cytosol] R-ATH-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119434 Phytic acid biosynthesis (lipid-independent) none Arabidopsis thaliana AT2G44040 R-ATH-1129184 AT2G44040 [cytosol] R-ATH-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119273 Lysine biosynthesis I none Arabidopsis thaliana AT2G44040 R-ATH-1129184 AT2G44040 [cytosol] R-ATH-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119283 Lysine biosynthesis II none Arabidopsis thaliana AT2G44040 R-ATH-5606505 AT2G44040 [plastid stroma] R-ATH-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119419 Lysine biosynthesis VI none Arabidopsis thaliana AT2G44050 R-ATH-1123563 AT2G44050 [cytosol] R-ATH-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119379 Flavin biosynthesis none Arabidopsis thaliana AT2G44350 R-ATH-1129055 AT2G44350 [mitochondrial matrix] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT2G44530 R-ATH-1124520 AT2G44530 [cytosol] R-ATH-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119278 PRPP biosynthesis I none Arabidopsis thaliana AT2G44680 R-ATH-8933728-2 AT2G44680 [nucleoplasm] R-ATH-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8933811 Circadian rhythm none Arabidopsis thaliana AT2G44940 R-ATH-9826639-2 AT2G44940 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT2G44990 R-ATH-5367777 AT2G44990 [plastid stroma] R-ATH-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5367729 Strigolactone biosynthesis none Arabidopsis thaliana AT2G45110 R-ATH-9924407 EXPB5 [basolateral plasma membrane] R-ATH-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9924451 Shoot (tiller) formation and regulation of tiller angle none Arabidopsis thaliana AT2G45290 R-ATH-1130247 AT2G45290 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT2G45300 R-ATH-1128197 AT2G45300 [plastid stroma] R-ATH-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119430 Chorismate biosynthesis none Arabidopsis thaliana AT2G45310 R-ATH-1126421 AT2G45310 [cytosol] R-ATH-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis thaliana AT2G45310 R-ATH-1126421 AT2G45310 [cytosol] R-ATH-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis thaliana AT2G45440 R-ATH-1126602 AT2G45440 [cytosol] R-ATH-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119273 Lysine biosynthesis I none Arabidopsis thaliana AT2G45440 R-ATH-1126602 AT2G45440 [cytosol] R-ATH-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119283 Lysine biosynthesis II none Arabidopsis thaliana AT2G45440 R-ATH-5606494 AT2G45440 [plastid stroma] R-ATH-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119419 Lysine biosynthesis VI none Arabidopsis thaliana AT2G45650 R-ATH-9608933 AT2G45650 [nucleoplasm] R-ATH-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9609102 Flower development none Arabidopsis thaliana AT2G45790 R-ATH-1125556 AT2G45790 [cytosol] R-ATH-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119410 Ascorbate biosynthesis none Arabidopsis thaliana AT2G45790 R-ATH-1125556 AT2G45790 [cytosol] R-ATH-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119628 GDP-mannose metabolism none Arabidopsis thaliana AT2G46110 R-ATH-1129411-2 AT2G46110 [cytosol] R-ATH-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119496 Pantothenate biosynthesis I none Arabidopsis thaliana AT2G46110 R-ATH-1129411-2 AT2G46110 [cytosol] R-ATH-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119544 Pantothenate biosynthesis II none Arabidopsis thaliana AT2G46340 R-ATH-8933788 AT2G46340 [nucleoplasm] R-ATH-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8933811 Circadian rhythm none Arabidopsis thaliana AT2G46370 R-ATH-6787202 AT2G46370 [cytosol] R-ATH-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6787011 Jasmonic acid signaling none Arabidopsis thaliana AT2G46510 R-ATH-6787066-3 AT2G46510 [nucleoplasm] R-ATH-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6787011 Jasmonic acid signaling none Arabidopsis thaliana AT2G46580 R-ATH-1126671 AT2G46580 [cytosol] R-ATH-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119534 Pyridoxal 5'-phosphate salvage pathway none Arabidopsis thaliana AT2G46580 R-ATH-1126671 AT2G46580 [cytosol] R-ATH-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119594 Pyridoxal 5'-phosphate biosynthesis none Arabidopsis thaliana AT2G46830 R-ATH-8933759-2 AT2G46830 [nucleoplasm] R-ATH-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8933811 Circadian rhythm none Arabidopsis thaliana AT2G47510 R-ATH-1126830-2 AT2G47510 [mitochondrial matrix] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT2G47520 R-ATH-9826657 AT2G47520 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT2G48150 R-ATH-1128534 AT2G48150 [cytosol] R-ATH-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119437 Glutathione redox reactions I none Arabidopsis thaliana AT3G01010 R-ATH-9681886-3 AT3G01010 [cytosol] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT3G01180 R-ATH-1130101 AT3G01180 [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT3G01190 R-ATH-9916124 OsPRX95 [extracellular region] R-ATH-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119403 Removal of superoxide radicals none Arabidopsis thaliana AT3G01190 R-ATH-9916124 OsPRX95 [extracellular region] R-ATH-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9607185 Generation of superoxide radicals none Arabidopsis thaliana AT3G01280 R-ATH-4752546-2 AT3G01280 [plastid stroma] R-ATH-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119498 Phylloquinone biosynthesis none Arabidopsis thaliana AT3G01500 R-ATH-1130327-4 AT3G01500 [cytosol] R-ATH-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119586 Cyanate degradation none Arabidopsis thaliana AT3G01640 R-ATH-3240748 AT3G01640 [cytosol] R-ATH-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Arabidopsis thaliana AT3G01850 R-ATH-1124905 AT3G01850 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT3G01910 R-ATH-9612406 AT3G01910 [mitochondrial matrix] R-ATH-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119612 Cysteine degradation none Arabidopsis thaliana AT3G02020 R-ATH-1126714-3 AT3G02020 [cytosol] R-ATH-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119273 Lysine biosynthesis I none Arabidopsis thaliana AT3G02020 R-ATH-1126714-3 AT3G02020 [cytosol] R-ATH-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119283 Lysine biosynthesis II none Arabidopsis thaliana AT3G02020 R-ATH-1126714-3 AT3G02020 [cytosol] R-ATH-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119295 Homoserine biosynthesis none Arabidopsis thaliana AT3G02020 R-ATH-5606484-3 AT3G02020 [plastid stroma] R-ATH-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119419 Lysine biosynthesis VI none Arabidopsis thaliana AT3G02140 R-ATH-6787262-2 AT3G02140 [nucleoplasm] R-ATH-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6787011 Jasmonic acid signaling none Arabidopsis thaliana AT3G02230 R-ATH-9681910 AT3G02230 [Golgi membrane] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT3G02380 R-ATH-8934168 AT3G02380 [nucleoplasm] R-ATH-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934036 Long day regulated expression of florigens none Arabidopsis thaliana AT3G02380 R-ATH-8934168 AT3G02380 [nucleoplasm] R-ATH-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934108 Short day regulated expression of florigens none Arabidopsis thaliana AT3G02380 R-ATH-9920270 AT3G02380 [nucleoplasm] R-ATH-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934108 Short day regulated expression of florigens none Arabidopsis thaliana AT3G02380 R-ATH-8934168 AT3G02380 [nucleoplasm] R-ATH-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9928946 Drought escape (DE) via ABA-independent pathway none Arabidopsis thaliana AT3G02520 R-ATH-5632238 AT3G02520 [cytosol] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT3G02520 R-ATH-5632238 AT3G02520 [cytosol] R-ATH-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934257 Transition from vegetative to reproductive shoot apical meristem none Arabidopsis thaliana AT3G02520 R-ATH-9927894 AT3G02520 [nucleoplasm] R-ATH-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934257 Transition from vegetative to reproductive shoot apical meristem none Arabidopsis thaliana AT3G02520 R-ATH-5632238 AT3G02520 [cytosol] R-ATH-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9609102 Flower development none Arabidopsis thaliana AT3G02520 R-ATH-5632238 AT3G02520 [cytosol] R-ATH-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9928831 Severe drought none Arabidopsis thaliana AT3G02520 R-ATH-9927894 AT3G02520 [nucleoplasm] R-ATH-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9928831 Severe drought none Arabidopsis thaliana AT3G02570 R-ATH-1126531 AT3G02570 [cytosol] R-ATH-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119410 Ascorbate biosynthesis none Arabidopsis thaliana AT3G02570 R-ATH-1126531 AT3G02570 [cytosol] R-ATH-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119628 GDP-mannose metabolism none Arabidopsis thaliana AT3G02780 R-ATH-1129816 AT3G02780 [plastid stroma] R-ATH-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119367 Polyisoprenoid biosynthesis none Arabidopsis thaliana AT3G02780 R-ATH-1129816 AT3G02780 [plastid stroma] R-ATH-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119615 Mevalonate pathway none Arabidopsis thaliana AT3G02870 R-ATH-9639016 AT3G02870 [cytosol] R-ATH-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119410 Ascorbate biosynthesis none Arabidopsis thaliana AT3G02870 R-ATH-9639016 AT3G02870 [cytosol] R-ATH-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119434 Phytic acid biosynthesis (lipid-independent) none Arabidopsis thaliana AT3G02875 R-ATH-2685731 AT3G02875 [cytosol] R-ATH-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119580 IAA biosynthesis II none Arabidopsis thaliana AT3G02920 R-ATH-9645872-2 AT3G02920 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT3G03660 R-ATH-9924413 WOX6 [nucleoplasm] R-ATH-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9924451 Shoot (tiller) formation and regulation of tiller angle none Arabidopsis thaliana AT3G03780 R-ATH-1125151 AT3G03780 [cytosol] R-ATH-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119400 Methionine biosynthesis II none Arabidopsis thaliana AT3G03780 R-ATH-1125151 AT3G03780 [cytosol] R-ATH-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119501 S-adenosyl-L-methionine cycle none Arabidopsis thaliana AT3G03990 R-ATH-5654859 AT3G03990 [nucleoplasm] R-ATH-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5654828 Strigolactone signaling none Arabidopsis thaliana AT3G03990 R-ATH-5654859 AT3G03990 [nucleoplasm] R-ATH-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Arabidopsis thaliana AT3G04120 R-ATH-1122785-2 AT3G04120 [cytosol] R-ATH-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119273 Lysine biosynthesis I none Arabidopsis thaliana AT3G04120 R-ATH-1126726-2 AT3G04120 [cytosol] R-ATH-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119273 Lysine biosynthesis I none Arabidopsis thaliana AT3G04120 R-ATH-1122785-2 AT3G04120 [cytosol] R-ATH-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119283 Lysine biosynthesis II none Arabidopsis thaliana AT3G04120 R-ATH-1126726-2 AT3G04120 [cytosol] R-ATH-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119283 Lysine biosynthesis II none Arabidopsis thaliana AT3G04120 R-ATH-1122785-2 AT3G04120 [cytosol] R-ATH-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119570 Cytosolic glycolysis none Arabidopsis thaliana AT3G04520 R-ATH-1128298 AT3G04520 [cytosol] R-ATH-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119271 Threonine degradation none Arabidopsis thaliana AT3G04520 R-ATH-1128298 AT3G04520 [cytosol] R-ATH-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119610 Biotin biosynthesis II none Arabidopsis thaliana AT3G04580 R-ATH-5225766-3 AT3G04580 [nucleoplasm] R-ATH-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5225756 Ethylene mediated signaling none Arabidopsis thaliana AT3G04730 R-ATH-1122892-4 AT3G04730 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT3G04730 R-ATH-1122892-4 AT3G04730 [nucleoplasm] R-ATH-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030557 Lateral root initiation none Arabidopsis thaliana AT3G04730 R-ATH-1122892-4 AT3G04730 [nucleoplasm] R-ATH-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030654 Primary root development none Arabidopsis thaliana AT3G04790 R-ATH-1127705 AT3G04790 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT3G04870 R-ATH-1125038 AT3G04870 [plastid stroma] R-ATH-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119449 Carotenoid biosynthesis none Arabidopsis thaliana AT3G05120 R-ATH-5679398-2 AT3G05120 [cytosol] R-ATH-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5679411 Gibberellin signaling none Arabidopsis thaliana AT3G06060 R-ATH-9025500 AT3G06060 [endoplasmic reticulum membrane] R-ATH-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119325 Sphingolipid metabolism none Arabidopsis thaliana AT3G06350 R-ATH-1127695 AT3G06350 [plastid stroma] R-ATH-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119430 Chorismate biosynthesis none Arabidopsis thaliana AT3G06580 R-ATH-1129507 AT3G06580 [cytosol] R-ATH-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119452 Galactose degradation II none Arabidopsis thaliana AT3G07540 R-ATH-9639789 AT3G07540 [plasma membrane] R-ATH-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639861 Development of root hair none Arabidopsis thaliana AT3G07610 R-ATH-9826597 AT3G07610 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT3G07620 R-ATH-5655007 AT3G07620 [Golgi lumen] R-ATH-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5655010 Xylogalacturonan biosynthesis none Arabidopsis thaliana AT3G07630 R-ATH-1126883 AT3G07630 [cytosol] R-ATH-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119389 Phenylalanine biosynthesis I none Arabidopsis thaliana AT3G07690 R-ATH-9025331-2 AT3G07690 [cytosol] R-ATH-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119402 Phospholipid biosynthesis I none Arabidopsis thaliana AT3G07760 R-ATH-9916125 AT3G07760 [nucleoplasm] R-ATH-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9916190 Root angle formation: elongation and curvature response none Arabidopsis thaliana AT3G07760 R-ATH-9916231 AT3G07760 [cytosol] R-ATH-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9916190 Root angle formation: elongation and curvature response none Arabidopsis thaliana AT3G07760 R-ATH-9916199 phospho-AT3G07760 [cytosol] R-ATH-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9916190 Root angle formation: elongation and curvature response none Arabidopsis thaliana AT3G08040 R-ATH-9639088 AT3G08040 [plasma membrane] R-ATH-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639136 Response to Aluminum stress none Arabidopsis thaliana AT3G08840 R-ATH-1124234 AT3G08840 [cytosol] R-ATH-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119436 Peptidoglycan biosynthesis I none Arabidopsis thaliana AT3G08860 R-ATH-1129539-2 AT3G08860 [cytosol] R-ATH-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119610 Biotin biosynthesis II none Arabidopsis thaliana AT3G08900 R-ATH-9681895 AT3G08900 [Golgi membrane] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT3G09090 R-ATH-8986695 AT3G09090 [endoplasmic reticulum membrane] R-ATH-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8986768 Anther and pollen development none Arabidopsis thaliana AT3G09640 R-ATH-1127140 AT3G09640 [cytosol] R-ATH-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119403 Removal of superoxide radicals none Arabidopsis thaliana AT3G09810 R-ATH-1129851-2 AT3G09810 [mitochondrial matrix] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT3G09810 R-ATH-1129851-2 AT3G09810 [mitochondrial matrix] R-ATH-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119540 Leucine biosynthesis none Arabidopsis thaliana AT3G10050 R-ATH-1127031 AT3G10050 [cytosol] R-ATH-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119460 Isoleucine biosynthesis from threonine none Arabidopsis thaliana AT3G10230 R-ATH-1122832 AT3G10230 [plastid stroma] R-ATH-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119449 Carotenoid biosynthesis none Arabidopsis thaliana AT3G10340 R-ATH-1130235-3 AT3G10340 [cytosol] R-ATH-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119261 Salicylate biosynthesis none Arabidopsis thaliana AT3G10340 R-ATH-1130235-3 AT3G10340 [cytosol] R-ATH-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119418 Suberin biosynthesis none Arabidopsis thaliana AT3G10340 R-ATH-1130235-3 AT3G10340 [cytosol] R-ATH-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119582 Phenylpropanoid biosynthesis, initial reactions none Arabidopsis thaliana AT3G10370 R-ATH-1125631 AT3G10370 [cytosol] R-ATH-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119321 Glycerol degradation I none Arabidopsis thaliana AT3G10920 R-ATH-1129811 AT3G10920 [mitochondrion] R-ATH-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119403 Removal of superoxide radicals none Arabidopsis thaliana AT3G11170 R-ATH-1129616 AT3G11170 [cytosol] R-ATH-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119300 Glycolipid desaturation none Arabidopsis thaliana AT3G11320 R-ATH-9681885-2 AT3G11320 [Golgi membrane] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT3G11340 R-ATH-1123470-18 AT3G11340 [cytosol] R-ATH-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis thaliana AT3G11340 R-ATH-1123470-18 AT3G11340 [cytosol] R-ATH-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis thaliana AT3G11340 R-ATH-1123470-18 AT3G11340 [cytosol] R-ATH-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis thaliana AT3G11410 R-ATH-4415078-4 AT3G11410 [cytosol] R-ATH-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis thaliana AT3G11750 R-ATH-1127625-3 AT3G11750 [cytosol] R-ATH-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119265 Tetrahydrofolate biosynthesis I none Arabidopsis thaliana AT3G11750 R-ATH-1127625-3 AT3G11750 [cytosol] R-ATH-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119523 Tetrahydrofolate biosynthesis II none Arabidopsis thaliana AT3G11950 R-ATH-1126689 AT3G11950 [cytosol] R-ATH-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119353 Linear furanocoumarin biosynthesis none Arabidopsis thaliana AT3G11980 R-ATH-8986767 AT3G11980 [plastid] R-ATH-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8986768 Anther and pollen development none Arabidopsis thaliana AT3G12120 R-ATH-1124598 AT3G12120 [cytosol] R-ATH-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119300 Glycolipid desaturation none Arabidopsis thaliana AT3G12250 R-ATH-6788172 AT3G12250 [nucleoplasm] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT3G12280 R-ATH-9640763 AT3G12280 [nucleoplasm] R-ATH-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640887 G1/S transition none Arabidopsis thaliana AT3G12280 R-ATH-9640885 phospho-AT3G12280 [nucleoplasm] R-ATH-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640887 G1/S transition none Arabidopsis thaliana AT3G12480 R-ATH-9916302 AT3G12480 [nucleoplasm] R-ATH-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9916190 Root angle formation: elongation and curvature response none Arabidopsis thaliana AT3G12530 R-ATH-9675820 AT3G12530 [nucleoplasm] R-ATH-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675824 DNA replication Initiation none Arabidopsis thaliana AT3G12550 R-ATH-9684723-5 AT3G12550 [cytosol] R-ATH-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9609102 Flower development none Arabidopsis thaliana AT3G12780 R-ATH-5149643 AT3G12780 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT3G13110 R-ATH-1127723 AT3G13110 [cytosol] R-ATH-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119331 Cysteine biosynthesis I none Arabidopsis thaliana AT3G13450 R-ATH-9611864 AT3G13450 [mitochondrial matrix] R-ATH-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119479 Valine degradation none Arabidopsis thaliana AT3G13810 R-ATH-5679401-2 AT3G13810 [nucleoplasm] R-ATH-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5679411 Gibberellin signaling none Arabidopsis thaliana AT3G14130 R-ATH-1130222 AT3G14130 [cytosol] R-ATH-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119596 Glutamate biosynthesis I none Arabidopsis thaliana AT3G14150 R-ATH-1130222-2 AT3G14150 [cytosol] R-ATH-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119596 Glutamate biosynthesis I none Arabidopsis thaliana AT3G14390 R-ATH-1127738-2 AT3G14390 [cytosol] R-ATH-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119273 Lysine biosynthesis I none Arabidopsis thaliana AT3G14390 R-ATH-1127738-2 AT3G14390 [cytosol] R-ATH-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119283 Lysine biosynthesis II none Arabidopsis thaliana AT3G14390 R-ATH-5606514-2 AT3G14390 [plastid stroma] R-ATH-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119419 Lysine biosynthesis VI none Arabidopsis thaliana AT3G14415 R-ATH-8987473-2 AT3G14415 [peroxisomal matrix] R-ATH-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119312 Photorespiration none Arabidopsis thaliana AT3G14415 R-ATH-1124984-2 AT3G14415 [cytosol] R-ATH-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119596 Glutamate biosynthesis I none Arabidopsis thaliana AT3G14420 R-ATH-8987473 AT3G14420 [peroxisomal matrix] R-ATH-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119312 Photorespiration none Arabidopsis thaliana AT3G14420 R-ATH-1124984 AT3G14420 [cytosol] R-ATH-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119596 Glutamate biosynthesis I none Arabidopsis thaliana AT3G14440 R-ATH-5221144-2 AT3G14440 [plastid] R-ATH-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119374 Abscisic acid biosynthesis none Arabidopsis thaliana AT3G14720 R-ATH-9930197 MPK8 [nucleoplasm] R-ATH-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9766881 TF network involved in salinity response none Arabidopsis thaliana AT3G15020 R-ATH-1128071 AT3G15020 [mitochondrial matrix] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT3G15270 R-ATH-9035727-3 AT3G15270 [cytosol] R-ATH-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9035605 Regulation of seed size none Arabidopsis thaliana AT3G15270 R-ATH-9035692-3 AT3G15270 [nucleoplasm] R-ATH-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9035605 Regulation of seed size none Arabidopsis thaliana AT3G15730 R-ATH-1125906 AT3G15730 [cytosol] R-ATH-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119276 Choline biosynthesis III none Arabidopsis thaliana AT3G16150 R-ATH-5654750 AT3G16150 [cytosol] R-ATH-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119393 Asparagine degradation I none Arabidopsis thaliana AT3G16500 R-ATH-1125997-2 AT3G16500 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT3G16500 R-ATH-1125997-2 AT3G16500 [nucleoplasm] R-ATH-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030680 Crown root development none Arabidopsis thaliana AT3G16700 R-ATH-1129390 AT3G16700 [mitochondrion] R-ATH-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119506 tyrosine degradation I none Arabidopsis thaliana AT3G16830 R-ATH-5632301-2 AT3G16830 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT3G16830 R-ATH-5632301-2 AT3G16830 [nucleoplasm] R-ATH-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5654828 Strigolactone signaling none Arabidopsis thaliana AT3G16830 R-ATH-5632301-2 AT3G16830 [nucleoplasm] R-ATH-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6787011 Jasmonic acid signaling none Arabidopsis thaliana AT3G17240 R-ATH-8986605-2 AT3G17240 [mitochondrial matrix] R-ATH-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119312 Photorespiration none Arabidopsis thaliana AT3G17240 R-ATH-1124620-2 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-ATH-1119351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119351 Mitochondrial pyruvate metabolism none Arabidopsis thaliana AT3G17240 R-ATH-1124620-2 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT3G17600 R-ATH-1129914 AT3G17600 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT3G17720 R-ATH-1122843 AT3G17720 [cytosol] R-ATH-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119458 Glutamate degradation none Arabidopsis thaliana AT3G17760 R-ATH-1122843-2 AT3G17760 [cytosol] R-ATH-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119458 Glutamate degradation none Arabidopsis thaliana AT3G17810 R-ATH-9658702 AT3G17810 [plastid stroma] R-ATH-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119297 Beta-alanine biosynthesis III none Arabidopsis thaliana AT3G18000 R-ATH-8854127-3 AT3G18000 [cytosol] R-ATH-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119556 Choline biosynthesis I none Arabidopsis thaliana AT3G18070 R-ATH-1124285 AT3G18070 [cytosol] R-ATH-1119284 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119284 Coumarin biosynthesis (via 2-coumarate) none Arabidopsis thaliana AT3G18080 R-ATH-1124285-2 AT3G18080 [cytosol] R-ATH-1119284 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119284 Coumarin biosynthesis (via 2-coumarate) none Arabidopsis thaliana AT3G18850 R-ATH-1129208-2 AT3G18850 [chloroplast envelope] R-ATH-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119402 Phospholipid biosynthesis I none Arabidopsis thaliana AT3G19260 R-ATH-9025430 AT3G19260 [endoplasmic reticulum membrane] R-ATH-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119325 Sphingolipid metabolism none Arabidopsis thaliana AT3G19270 R-ATH-1126380 AT3G19270 [cytosol] R-ATH-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119609 Phaseic acid biosynthesis none Arabidopsis thaliana AT3G19290 R-ATH-9928801 AT3G19290 [nucleoplasm] R-ATH-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9928995 Drought escape (DE) via ABA-dependent pathway none Arabidopsis thaliana AT3G19450 R-ATH-1125967 AT3G19450 [cytosol] R-ATH-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119316 Phenylpropanoid biosynthesis none Arabidopsis thaliana AT3G19580 R-ATH-8879027-2 AT3G19580 [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT3G19640 R-ATH-9639111 AT3G19640 [plasma membrane] R-ATH-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639136 Response to Aluminum stress none Arabidopsis thaliana AT3G19710 R-ATH-1122974-4 AT3G19710 [mitochondrial matrix] R-ATH-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119479 Valine degradation none Arabidopsis thaliana AT3G19980 R-ATH-5632121-2 AT3G19980 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT3G20040 R-ATH-1127928-2 AT3G20040 [cytosol] R-ATH-1119595 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119595 Mannose degradation none Arabidopsis thaliana AT3G20040 R-ATH-1127928-2 AT3G20040 [cytosol] R-ATH-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119601 Trehalose degradation II none Arabidopsis thaliana AT3G20040 R-ATH-1127928-2 AT3G20040 [cytosol] R-ATH-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119628 GDP-mannose metabolism none Arabidopsis thaliana AT3G20330 R-ATH-1128906 AT3G20330 [cytosol] R-ATH-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119444 Canavanine biosynthesis none Arabidopsis thaliana AT3G20440 R-ATH-1122403 AT3G20440 [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT3G21140 R-ATH-1126034-2 AT3G21140 [cytosol] R-ATH-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119534 Pyridoxal 5'-phosphate salvage pathway none Arabidopsis thaliana AT3G21140 R-ATH-1126034-2 AT3G21140 [cytosol] R-ATH-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119594 Pyridoxal 5'-phosphate biosynthesis none Arabidopsis thaliana AT3G21220 R-ATH-9675354 AT3G21220 [nucleoplasm] R-ATH-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675508 Root elongation none Arabidopsis thaliana AT3G21220 R-ATH-9675335 AT3G21220 [mitochondrial matrix] R-ATH-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675508 Root elongation none Arabidopsis thaliana AT3G21240 R-ATH-1125406-2 AT3G21240 [cytosol] R-ATH-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119418 Suberin biosynthesis none Arabidopsis thaliana AT3G21330 R-ATH-9920284 AT3G21330 [nucleoplasm] R-ATH-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934108 Short day regulated expression of florigens none Arabidopsis thaliana AT3G21500 R-ATH-4723654 AT3G21500 [plastid stroma] R-ATH-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119464 Methylerythritol phosphate pathway none Arabidopsis thaliana AT3G21500 R-ATH-1130030 AT3G21500 [cytosol] R-ATH-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119594 Pyridoxal 5'-phosphate biosynthesis none Arabidopsis thaliana AT3G21500 R-ATH-1130030 AT3G21500 [cytosol] R-ATH-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119629 Thiamine biosynthesis none Arabidopsis thaliana AT3G21630 R-ATH-9611549 phospho-phosphorylated-CERK1 [plasma membrane] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT3G21730 R-ATH-1127625-2 AT3G21730 [cytosol] R-ATH-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119265 Tetrahydrofolate biosynthesis I none Arabidopsis thaliana AT3G21730 R-ATH-1127625-2 AT3G21730 [cytosol] R-ATH-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119523 Tetrahydrofolate biosynthesis II none Arabidopsis thaliana AT3G22200 R-ATH-9026148 AT3G22200 [mitochondrion] R-ATH-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119458 Glutamate degradation none Arabidopsis thaliana AT3G22200 R-ATH-1130288 AT3G22200 [cytosol] R-ATH-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119610 Biotin biosynthesis II none Arabidopsis thaliana AT3G22425 R-ATH-1125584-2 AT3G22425 [plastid stroma] R-ATH-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119509 Histidine biosynthesis I none Arabidopsis thaliana AT3G22460 R-ATH-1126794 AT3G22460 [cytosol] R-ATH-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119331 Cysteine biosynthesis I none Arabidopsis thaliana AT3G22740 R-ATH-1128594-2 AT3G22740 [cytosol] R-ATH-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119349 S-methylmethionine cycle none Arabidopsis thaliana AT3G22740 R-ATH-1128594-2 AT3G22740 [cytosol] R-ATH-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119400 Methionine biosynthesis II none Arabidopsis thaliana AT3G22830 R-ATH-9924379-4 HSFA2D [nucleoplasm] R-ATH-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9924451 Shoot (tiller) formation and regulation of tiller angle none Arabidopsis thaliana AT3G22890 R-ATH-1128257-2 AT3G22890 [plastid stroma] R-ATH-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119529 Sulfate activation for sulfonation none Arabidopsis thaliana AT3G23050 R-ATH-1122892-3 AT3G23050 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT3G23050 R-ATH-1122892-3 AT3G23050 [nucleoplasm] R-ATH-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030557 Lateral root initiation none Arabidopsis thaliana AT3G23050 R-ATH-1122892-3 AT3G23050 [nucleoplasm] R-ATH-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030654 Primary root development none Arabidopsis thaliana AT3G23150 R-ATH-5225766 AT3G23150 [nucleoplasm] R-ATH-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5225756 Ethylene mediated signaling none Arabidopsis thaliana AT3G23230 R-ATH-6786994 AT3G23230 [nucleoplasm] R-ATH-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6787011 Jasmonic acid signaling none Arabidopsis thaliana AT3G23250 R-ATH-8879002 AT3G23250 [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT3G23490 R-ATH-5683263 AT3G23490 [cytosol] R-ATH-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119586 Cyanate degradation none Arabidopsis thaliana AT3G23810 R-ATH-1129029 AT3G23810 [cytosol] R-ATH-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119501 S-adenosyl-L-methionine cycle none Arabidopsis thaliana AT3G23820 R-ATH-1129921 AT3G23820 [cytosol] R-ATH-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis thaliana AT3G23820 R-ATH-1129921 AT3G23820 [cytosol] R-ATH-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis thaliana AT3G23940 R-ATH-1127733 AT3G23940 [cytosol] R-ATH-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119460 Isoleucine biosynthesis from threonine none Arabidopsis thaliana AT3G23940 R-ATH-1127733 AT3G23940 [cytosol] R-ATH-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119600 Valine biosynthesis none Arabidopsis thaliana AT3G24170 R-ATH-1129113 AT3G24170 [cytosol] R-ATH-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119298 Glutathione redox reactions II none Arabidopsis thaliana AT3G24170 R-ATH-1129113 AT3G24170 [cytosol] R-ATH-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119437 Glutathione redox reactions I none Arabidopsis thaliana AT3G24440 R-ATH-9920304 AT3G24440 [nucleoplasm] R-ATH-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934036 Long day regulated expression of florigens none Arabidopsis thaliana AT3G24440 R-ATH-9920304 AT3G24440 [nucleoplasm] R-ATH-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934108 Short day regulated expression of florigens none Arabidopsis thaliana AT3G24810 R-ATH-9640789 AT3G24810 [nucleoplasm] R-ATH-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640760 G1 phase none Arabidopsis thaliana AT3G25100 R-ATH-9645907 AT3G25100 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT3G25100 R-ATH-9645907 AT3G25100 [nucleoplasm] R-ATH-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675824 DNA replication Initiation none Arabidopsis thaliana AT3G25500 R-ATH-9639789-4 AT3G25500 [plasma membrane] R-ATH-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639861 Development of root hair none Arabidopsis thaliana AT3G25540 R-ATH-9025439 AT3G25540 [endoplasmic reticulum membrane] R-ATH-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119325 Sphingolipid metabolism none Arabidopsis thaliana AT3G25585 R-ATH-8854445 AT3G25585 [cytosol] R-ATH-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119276 Choline biosynthesis III none Arabidopsis thaliana AT3G25730 R-ATH-9826681 EREBP129 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT3G25900 R-ATH-1129111 AT3G25900 [cytosol] R-ATH-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119349 S-methylmethionine cycle none Arabidopsis thaliana AT3G25900 R-ATH-1129111 AT3G25900 [cytosol] R-ATH-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119400 Methionine biosynthesis II none Arabidopsis thaliana AT3G26020 R-ATH-5632129 AT3G26020 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT3G26650 R-ATH-1127873 AT3G26650 [plastid stroma] R-ATH-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119424 Plastid glycolysis none Arabidopsis thaliana AT3G26650 R-ATH-1127873 AT3G26650 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT3G26744 R-ATH-8879006 AT3G26744 [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT3G26810 R-ATH-5608218 AT3G26810 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT3G26810 R-ATH-5608218 AT3G26810 [nucleoplasm] R-ATH-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9608575 Reproductive meristem phase change none Arabidopsis thaliana AT3G26810 R-ATH-9658968 AT3G26810 [cytosol] R-ATH-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9608575 Reproductive meristem phase change none Arabidopsis thaliana AT3G26900 R-ATH-1125182 AT3G26900 [plastid stroma] R-ATH-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119430 Chorismate biosynthesis none Arabidopsis thaliana AT3G27190 R-ATH-1124138-2 AT3G27190 [cytosol] R-ATH-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119394 Pantothenate and coenzyme A biosynthesis III none Arabidopsis thaliana AT3G27380 R-ATH-1122601 AT3G27380 [mitochondrial inner membrane] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT3G27740 R-ATH-5633270 AT3G27740 [cytosol] R-ATH-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119495 Citrulline biosynthesis none Arabidopsis thaliana AT3G29035 R-ATH-9766876 AT3G29035 [nucleoplasm] R-ATH-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9766881 TF network involved in salinity response none Arabidopsis thaliana AT3G29035 R-ATH-9766876 AT3G29035 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT3G29200 R-ATH-1126095-2 AT3G29200 [cytosol] R-ATH-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119389 Phenylalanine biosynthesis I none Arabidopsis thaliana AT3G29360 R-ATH-9681886-2 AT3G29360 [cytosol] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT3G29575 R-ATH-6787262-4 AT3G29575 [nucleoplasm] R-ATH-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6787011 Jasmonic acid signaling none Arabidopsis thaliana AT3G42180 R-ATH-5655005 AT3G42180 [Golgi lumen] R-ATH-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5655010 Xylogalacturonan biosynthesis none Arabidopsis thaliana AT3G42850 R-ATH-1130281 AT3G42850 [cytosol] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT3G43190 R-ATH-1129561 AT3G43190 [cytosol] R-ATH-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119452 Galactose degradation II none Arabidopsis thaliana AT3G43190 R-ATH-1129561 AT3G43190 [cytosol] R-ATH-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119465 Sucrose biosynthesis none Arabidopsis thaliana AT3G43600 R-ATH-1250418-4 AT3G43600 [cytosol] R-ATH-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119374 Abscisic acid biosynthesis none Arabidopsis thaliana AT3G43600 R-ATH-1129637-4 AT3G43600 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT3G43790 R-ATH-9025819 AT3G43790 [plasma membrane] R-ATH-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9025727 Iron uptake and transport in root vascular system none Arabidopsis thaliana AT3G44300 R-ATH-1127161-2 AT3G44300 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT3G44310 R-ATH-1127161 AT3G44310 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT3G44320 R-ATH-1127161-3 AT3G44320 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT3G44720 R-ATH-1129481 AT3G44720 [cytosol] R-ATH-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119389 Phenylalanine biosynthesis I none Arabidopsis thaliana AT3G45140 R-ATH-1129769 AT3G45140 [cytosol] R-ATH-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119332 Jasmonic acid biosynthesis none Arabidopsis thaliana AT3G45140 R-ATH-1129769 AT3G45140 [cytosol] R-ATH-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119618 13-LOX and 13-HPL pathway none Arabidopsis thaliana AT3G45300 R-ATH-9611863 AT3G45300 [mitochondrial matrix] R-ATH-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119479 Valine degradation none Arabidopsis thaliana AT3G45640 R-ATH-9675423 AT3G45640 [nucleoplasm] R-ATH-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675508 Root elongation none Arabidopsis thaliana AT3G45640 R-ATH-9930290 MPK5 [nucleoplasm] R-ATH-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9766881 TF network involved in salinity response none Arabidopsis thaliana AT3G45810 R-ATH-9639874-2 AT3G45810 [plasma membrane] R-ATH-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639861 Development of root hair none Arabidopsis thaliana AT3G46130 R-ATH-9826691-2 AT3G46130 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT3G46440 R-ATH-1126799 AT3G46440 [cytosol] R-ATH-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis thaliana AT3G46440 R-ATH-1126799 AT3G46440 [cytosol] R-ATH-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119563 UDP-D-xylose biosynthesis none Arabidopsis thaliana AT3G46440 R-ATH-1126799 AT3G46440 [cytosol] R-ATH-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis thaliana AT3G46480 R-ATH-1122541-4 AT3G46480 [cytosol] R-ATH-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Arabidopsis thaliana AT3G46480 R-ATH-1122541-4 AT3G46480 [cytosol] R-ATH-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Arabidopsis thaliana AT3G46490 R-ATH-1122541-2 AT3G46490 [cytosol] R-ATH-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Arabidopsis thaliana AT3G46490 R-ATH-1122541-2 AT3G46490 [cytosol] R-ATH-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Arabidopsis thaliana AT3G46500 R-ATH-1122541 AT3G46500 [cytosol] R-ATH-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Arabidopsis thaliana AT3G46500 R-ATH-1122541 AT3G46500 [cytosol] R-ATH-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Arabidopsis thaliana AT3G46510 R-ATH-9611510 phospho-phosphorylated-SPL11 [plasma membrane] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT3G46510 R-ATH-9611544 SPL11 [nucleoplasm] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT3G46510 R-ATH-9611440 phospho-phosphorylated-SPL11 [nucleoplasm] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT3G46650 R-ATH-1123860 AT3G46650 [cytosol] R-ATH-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis thaliana AT3G46650 R-ATH-1123860 AT3G46650 [cytosol] R-ATH-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis thaliana AT3G46650 R-ATH-1123860 AT3G46650 [cytosol] R-ATH-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis thaliana AT3G46660 R-ATH-1123470-15 AT3G46660 [cytosol] R-ATH-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis thaliana AT3G46660 R-ATH-1123470-15 AT3G46660 [cytosol] R-ATH-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis thaliana AT3G46660 R-ATH-1123470-15 AT3G46660 [cytosol] R-ATH-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis thaliana AT3G46670 R-ATH-1123470-4 AT3G46670 [cytosol] R-ATH-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis thaliana AT3G46670 R-ATH-1123470-4 AT3G46670 [cytosol] R-ATH-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis thaliana AT3G46670 R-ATH-1123470-4 AT3G46670 [cytosol] R-ATH-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis thaliana AT3G46680 R-ATH-1123860-2 AT3G46680 [cytosol] R-ATH-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis thaliana AT3G46680 R-ATH-1123860-2 AT3G46680 [cytosol] R-ATH-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis thaliana AT3G46680 R-ATH-1123860-2 AT3G46680 [cytosol] R-ATH-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis thaliana AT3G46690 R-ATH-1123470-6 AT3G46690 [cytosol] R-ATH-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis thaliana AT3G46690 R-ATH-1123470-6 AT3G46690 [cytosol] R-ATH-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis thaliana AT3G46690 R-ATH-1123470-6 AT3G46690 [cytosol] R-ATH-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis thaliana AT3G46700 R-ATH-1123470-17 AT3G46700 [cytosol] R-ATH-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis thaliana AT3G46700 R-ATH-1123470-17 AT3G46700 [cytosol] R-ATH-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis thaliana AT3G46700 R-ATH-1123470-17 AT3G46700 [cytosol] R-ATH-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis thaliana AT3G46720 R-ATH-1123470-2 AT3G46720 [cytosol] R-ATH-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis thaliana AT3G46720 R-ATH-1123470-2 AT3G46720 [cytosol] R-ATH-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis thaliana AT3G46720 R-ATH-1123470-2 AT3G46720 [cytosol] R-ATH-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis thaliana AT3G47450 R-ATH-5633332 AT3G47450 [plastid stroma] R-ATH-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5633340 Citrulline-nitric oxide cycle none Arabidopsis thaliana AT3G47930 R-ATH-1129809 AT3G47930 [mitochondrial inner membrane] R-ATH-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119410 Ascorbate biosynthesis none Arabidopsis thaliana AT3G48000 R-ATH-1128334 AT3G48000 [mitochondrial matrix] R-ATH-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119337 Proline degradation none Arabidopsis thaliana AT3G48080 R-ATH-6788036 AT3G48080 [cytosol] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT3G48080 R-ATH-1126611 AT3G48080 [nucleoplasm] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT3G48090 R-ATH-6788036-2 AT3G48090 [cytosol] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT3G48090 R-ATH-1126611-2 AT3G48090 [nucleoplasm] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT3G48170 R-ATH-1129514 AT3G48170 [chloroplast] R-ATH-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119579 Glycine betaine biosynthesis III none Arabidopsis thaliana AT3G48670 R-ATH-9684723-4 AT3G48670 [cytosol] R-ATH-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9609102 Flower development none Arabidopsis thaliana AT3G48730 R-ATH-4827081-2 AT3G48730 [plastid stroma] R-ATH-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-4827054 Tetrapyrrole biosynthesis I none Arabidopsis thaliana AT3G48750 R-ATH-9640708 phospho-AT3G48750 [nucleoplasm] R-ATH-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640760 G1 phase none Arabidopsis thaliana AT3G48750 R-ATH-9640770 AT3G48750 [nucleoplasm] R-ATH-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640760 G1 phase none Arabidopsis thaliana AT3G48750 R-ATH-9640708 phospho-AT3G48750 [nucleoplasm] R-ATH-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640887 G1/S transition none Arabidopsis thaliana AT3G48780 R-ATH-9025471 AT3G48780 [endoplasmic reticulum membrane] R-ATH-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119325 Sphingolipid metabolism none Arabidopsis thaliana AT3G48780 R-ATH-1127934 AT3G48780 [cytosol] R-ATH-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119610 Biotin biosynthesis II none Arabidopsis thaliana AT3G48790 R-ATH-9025471-3 AT3G48790 [endoplasmic reticulum membrane] R-ATH-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119325 Sphingolipid metabolism none Arabidopsis thaliana AT3G48790 R-ATH-1127934-3 AT3G48790 [cytosol] R-ATH-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119610 Biotin biosynthesis II none Arabidopsis thaliana AT3G49660 R-ATH-9927759 AT3G49660 [nucleoplasm] R-ATH-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934036 Long day regulated expression of florigens none Arabidopsis thaliana AT3G49680 R-ATH-1123757 AT3G49680 [cytosol] R-ATH-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119460 Isoleucine biosynthesis from threonine none Arabidopsis thaliana AT3G49680 R-ATH-1123757 AT3G49680 [cytosol] R-ATH-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis thaliana AT3G49680 R-ATH-1123757 AT3G49680 [cytosol] R-ATH-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119496 Pantothenate biosynthesis I none Arabidopsis thaliana AT3G49680 R-ATH-1123757 AT3G49680 [cytosol] R-ATH-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119540 Leucine biosynthesis none Arabidopsis thaliana AT3G49680 R-ATH-1123757 AT3G49680 [cytosol] R-ATH-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119544 Pantothenate biosynthesis II none Arabidopsis thaliana AT3G49700 R-ATH-1123895-2 AT3G49700 [cytosol] R-ATH-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119334 Ethylene biosynthesis from methionine none Arabidopsis thaliana AT3G49700 R-ATH-1123895-2 AT3G49700 [cytosol] R-ATH-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119624 Methionine salvage pathway none Arabidopsis thaliana AT3G49930 R-ATH-8879027 AT3G49930 [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT3G50050 R-ATH-1123819-2 AT3G50050 [plastid stroma] R-ATH-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119464 Methylerythritol phosphate pathway none Arabidopsis thaliana AT3G50070 R-ATH-9640671-3 AT3G50070 [nucleoplasm] R-ATH-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640760 G1 phase none Arabidopsis thaliana AT3G50070 R-ATH-9640671-3 AT3G50070 [nucleoplasm] R-ATH-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640887 G1/S transition none Arabidopsis thaliana AT3G50260 R-ATH-8879009-2 AT3G50260 [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT3G50500 R-ATH-4415007-3 AT3G50500 [cytosol] R-ATH-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis thaliana AT3G50500 R-ATH-4415016-3 phospho-AT3G50500 [cytosol] R-ATH-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis thaliana AT3G50500 R-ATH-4415007-3 AT3G50500 [cytosol] R-ATH-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639861 Development of root hair none Arabidopsis thaliana AT3G50750 R-ATH-5632334 AT3G50750 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT3G50750 R-ATH-5632197 phospho-AT3G50750 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT3G50750 R-ATH-5632183 phospho-AT3G50750 [cytosol] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT3G50750 R-ATH-5632334 AT3G50750 [nucleoplasm] R-ATH-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5679411 Gibberellin signaling none Arabidopsis thaliana AT3G51160 R-ATH-1129282 AT3G51160 [cytosol] R-ATH-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis thaliana AT3G51160 R-ATH-1129282 AT3G51160 [cytosol] R-ATH-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis thaliana AT3G51240 R-ATH-2672431 AT3G51240 [cytosol] R-ATH-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119322 Leucodelphinidin biosynthesis none Arabidopsis thaliana AT3G51240 R-ATH-2672431 AT3G51240 [cytosol] R-ATH-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Arabidopsis thaliana AT3G51240 R-ATH-1124195 AT3G51240 [cytosol] R-ATH-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119531 Flavonoid biosynthesis none Arabidopsis thaliana AT3G51420 R-ATH-1127087-3 AT3G51420 [cytosol] R-ATH-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119438 Secologanin and strictosidine biosynthesis none Arabidopsis thaliana AT3G51430 R-ATH-1127087 AT3G51430 [cytosol] R-ATH-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119438 Secologanin and strictosidine biosynthesis none Arabidopsis thaliana AT3G51440 R-ATH-1127087-4 AT3G51440 [cytosol] R-ATH-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119438 Secologanin and strictosidine biosynthesis none Arabidopsis thaliana AT3G51450 R-ATH-1127087-2 AT3G51450 [cytosol] R-ATH-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119438 Secologanin and strictosidine biosynthesis none Arabidopsis thaliana AT3G51820 R-ATH-1124190 AT3G51820 [plastid stroma] R-ATH-1119412 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119412 Chlorophyll a biosynthesis I none Arabidopsis thaliana AT3G51840 R-ATH-1124145 AT3G51840 [mitochondrial matrix] R-ATH-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119445 Beta-alanine biosynthesis II none Arabidopsis thaliana AT3G51850 R-ATH-9916309 CPK3 [plasma membrane] R-ATH-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9916190 Root angle formation: elongation and curvature response none Arabidopsis thaliana AT3G51910 R-ATH-9924379-3 HSFA2D [nucleoplasm] R-ATH-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9924451 Shoot (tiller) formation and regulation of tiller angle none Arabidopsis thaliana AT3G52340 R-ATH-1127089-4 AT3G52340 [cytosol] R-ATH-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119465 Sucrose biosynthesis none Arabidopsis thaliana AT3G52430 R-ATH-6788234 AT3G52430 [cytosol] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT3G52430 R-ATH-1124041 AT3G52430 [nucleoplasm] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT3G52630 R-ATH-9646016-2 AT3G52630 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT3G52630 R-ATH-9646016-2 AT3G52630 [nucleoplasm] R-ATH-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675782 Maturation none Arabidopsis thaliana AT3G52630 R-ATH-9646016-2 AT3G52630 [nucleoplasm] R-ATH-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675885 Lagging strand synthesis none Arabidopsis thaliana AT3G52720 R-ATH-1125374 AT3G52720 [cytosol] R-ATH-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119586 Cyanate degradation none Arabidopsis thaliana AT3G52930 R-ATH-5149646 AT3G52930 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT3G52930 R-ATH-1126652 AT3G52930 [cytosol] R-ATH-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119570 Cytosolic glycolysis none Arabidopsis thaliana AT3G52940 R-ATH-1127922 AT3G52940 [cytosol] R-ATH-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119370 Sterol biosynthesis none Arabidopsis thaliana AT3G52950 R-ATH-1126955 AT3G52950 [plastid] R-ATH-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119407 Ureide biosynthesis none Arabidopsis thaliana AT3G53130 R-ATH-4754220 AT3G53130 [plastid stroma] R-ATH-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119449 Carotenoid biosynthesis none Arabidopsis thaliana AT3G53130 R-ATH-1126847 AT3G53130 [cytosol] R-ATH-1119492 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119492 Lactucaxanthin biosynthesis none Arabidopsis thaliana AT3G53150 R-ATH-1128678 AT3G53150 [cytosol] R-ATH-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis thaliana AT3G53150 R-ATH-1128678 AT3G53150 [cytosol] R-ATH-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis thaliana AT3G53150 R-ATH-1128678 AT3G53150 [cytosol] R-ATH-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis thaliana AT3G53260 R-ATH-1130235-4 AT3G53260 [cytosol] R-ATH-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119261 Salicylate biosynthesis none Arabidopsis thaliana AT3G53260 R-ATH-1130235-4 AT3G53260 [cytosol] R-ATH-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119418 Suberin biosynthesis none Arabidopsis thaliana AT3G53260 R-ATH-1130235-4 AT3G53260 [cytosol] R-ATH-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119582 Phenylpropanoid biosynthesis, initial reactions none Arabidopsis thaliana AT3G53420 R-ATH-9618056 AT3G53420 [plasma membrane] R-ATH-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9618218 Arsenic uptake and detoxification none Arabidopsis thaliana AT3G54050 R-ATH-1127082 AT3G54050 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT3G54250 R-ATH-1126436 AT3G54250 [cytosol] R-ATH-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119615 Mevalonate pathway none Arabidopsis thaliana AT3G54270 R-ATH-1127089 AT3G54270 [cytosol] R-ATH-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119465 Sucrose biosynthesis none Arabidopsis thaliana AT3G54640 R-ATH-1129781-2 AT3G54640 [chloroplast] R-ATH-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119494 Tryptophan biosynthesis none Arabidopsis thaliana AT3G54660 R-ATH-1127299 AT3G54660 [cytosol] R-ATH-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119298 Glutathione redox reactions II none Arabidopsis thaliana AT3G54660 R-ATH-1127299 AT3G54660 [cytosol] R-ATH-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119437 Glutathione redox reactions I none Arabidopsis thaliana AT3G55030 R-ATH-1130032 AT3G55030 [mitochondrial inner membrane] R-ATH-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119260 Cardiolipin biosynthesis none Arabidopsis thaliana AT3G55360 R-ATH-1125877 AT3G55360 [cytosol] R-ATH-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119456 Brassinosteroid biosynthesis II none Arabidopsis thaliana AT3G55410 R-ATH-1129818 AT3G55410 [mitochondrial matrix] R-ATH-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119365 Lysine degradation II none Arabidopsis thaliana AT3G55410 R-ATH-1173242 AT3G55410 [mitochondrial matrix] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT3G55440 R-ATH-5149632 AT3G55440 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT3G55490 R-ATH-9675860 AT3G55490 [nucleoplasm] R-ATH-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675824 DNA replication Initiation none Arabidopsis thaliana AT3G55590 R-ATH-1130202 AT3G55590 [cytosol] R-ATH-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119410 Ascorbate biosynthesis none Arabidopsis thaliana AT3G55610 R-ATH-1127913 AT3G55610 [cytosol] R-ATH-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119495 Citrulline biosynthesis none Arabidopsis thaliana AT3G55610 R-ATH-1127913 AT3G55610 [cytosol] R-ATH-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119631 Proline biosynthesis I none Arabidopsis thaliana AT3G55630 R-ATH-1125928-2 AT3G55630 [cytosol] R-ATH-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119484 Folate polyglutamylation II none Arabidopsis thaliana AT3G55630 R-ATH-1125928-2 AT3G55630 [cytosol] R-ATH-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119523 Tetrahydrofolate biosynthesis II none Arabidopsis thaliana AT3G55630 R-ATH-1125928-2 AT3G55630 [cytosol] R-ATH-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119617 Folate polyglutamylation I none Arabidopsis thaliana AT3G55700 R-ATH-1123470-9 AT3G55700 [cytosol] R-ATH-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis thaliana AT3G55700 R-ATH-1123470-9 AT3G55700 [cytosol] R-ATH-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis thaliana AT3G55700 R-ATH-1123470-9 AT3G55700 [cytosol] R-ATH-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis thaliana AT3G55710 R-ATH-1123470 AT3G55710 [cytosol] R-ATH-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis thaliana AT3G55710 R-ATH-1123470 AT3G55710 [cytosol] R-ATH-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis thaliana AT3G55710 R-ATH-1123470 AT3G55710 [cytosol] R-ATH-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis thaliana AT3G55800 R-ATH-5149683 AT3G55800 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT3G55870 R-ATH-1123998-3 AT3G55870 [chloroplast] R-ATH-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119494 Tryptophan biosynthesis none Arabidopsis thaliana AT3G57050 R-ATH-1125261 AT3G57050 R-ATH-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119400 Methionine biosynthesis II none Arabidopsis thaliana AT3G57220 R-ATH-1129311-2 AT3G57220 [cytosol] R-ATH-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Arabidopsis thaliana AT3G57520 R-ATH-2885386 AT3G57520 [cytosol] R-ATH-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119417 Stachyose biosynthesis none Arabidopsis thaliana AT3G57560 R-ATH-5138484 AT3G57560 [plastid stroma] R-ATH-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119263 Arginine biosynthesis none Arabidopsis thaliana AT3G57560 R-ATH-5138484 AT3G57560 [plastid stroma] R-ATH-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119539 Ornithine biosynthesis none Arabidopsis thaliana AT3G57560 R-ATH-5138484 AT3G57560 [plastid stroma] R-ATH-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119622 Arginine biosynthesis II (acetyl cycle) none Arabidopsis thaliana AT3G57650 R-ATH-1130036-2 AT3G57650 [endoplasmic reticulum membrane] R-ATH-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119402 Phospholipid biosynthesis I none Arabidopsis thaliana AT3G58500 R-ATH-5632241 AT3G58500 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT3G58610 R-ATH-1126157 AT3G58610 [cytosol] R-ATH-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119460 Isoleucine biosynthesis from threonine none Arabidopsis thaliana AT3G58610 R-ATH-1126157 AT3G58610 [cytosol] R-ATH-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119600 Valine biosynthesis none Arabidopsis thaliana AT3G58710 R-ATH-6788120 AT3G58710 [nucleoplasm] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT3G58710 R-ATH-6788120 AT3G58710 [nucleoplasm] R-ATH-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9766881 TF network involved in salinity response none Arabidopsis thaliana AT3G58780 R-ATH-8986675-3 AT3G58780 [nucleoplasm] R-ATH-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9609102 Flower development none Arabidopsis thaliana AT3G58830 R-ATH-8853988 Phosphatidylglycerophosphatase [mitochondrial matrix] R-ATH-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119260 Cardiolipin biosynthesis none Arabidopsis thaliana AT3G58990 R-ATH-1124032-3 AT3G58990 [cytosol] R-ATH-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119540 Leucine biosynthesis none Arabidopsis thaliana AT3G59060 R-ATH-5632266 AT3G59060 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT3G59060 R-ATH-5632266 AT3G59060 [nucleoplasm] R-ATH-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5679411 Gibberellin signaling none Arabidopsis thaliana AT3G59380 R-ATH-1129136 AT3G59380 [plastid stroma] R-ATH-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Arabidopsis thaliana AT3G59530 R-ATH-1125989 AT3G59530 [cytosol] R-ATH-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119438 Secologanin and strictosidine biosynthesis none Arabidopsis thaliana AT3G59760 R-ATH-1122545-2 AT3G59760 [cytosol] R-ATH-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119331 Cysteine biosynthesis I none Arabidopsis thaliana AT3G59790 R-ATH-9675391-2 AT3G59790 [nucleoplasm] R-ATH-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675508 Root elongation none Arabidopsis thaliana AT3G59890 R-ATH-1129184-2 AT3G59890 [cytosol] R-ATH-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119273 Lysine biosynthesis I none Arabidopsis thaliana AT3G59890 R-ATH-1129184-2 AT3G59890 [cytosol] R-ATH-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119283 Lysine biosynthesis II none Arabidopsis thaliana AT3G59890 R-ATH-5606505-2 AT3G59890 [plastid stroma] R-ATH-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119419 Lysine biosynthesis VI none Arabidopsis thaliana AT3G60100 R-ATH-1129055-2 AT3G60100 [mitochondrial matrix] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT3G60250 R-ATH-8933728 AT3G60250 [nucleoplasm] R-ATH-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8933811 Circadian rhythm none Arabidopsis thaliana AT3G60490 R-ATH-9826639 AT3G60490 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT3G60570 R-ATH-9924407-4 EXPB5 [basolateral plasma membrane] R-ATH-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9924451 Shoot (tiller) formation and regulation of tiller angle none Arabidopsis thaliana AT3G60750 R-ATH-1130247-2 AT3G60750 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT3G60880 R-ATH-1126602-2 AT3G60880 [cytosol] R-ATH-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119273 Lysine biosynthesis I none Arabidopsis thaliana AT3G60880 R-ATH-1126602-2 AT3G60880 [cytosol] R-ATH-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119283 Lysine biosynthesis II none Arabidopsis thaliana AT3G60880 R-ATH-5606494-2 AT3G60880 [plastid stroma] R-ATH-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119419 Lysine biosynthesis VI none Arabidopsis thaliana AT3G61120 R-ATH-9608933-2 AT3G61120 [nucleoplasm] R-ATH-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9609102 Flower development none Arabidopsis thaliana AT3G61510 R-ATH-1129892-2 AT3G61510 [cytosol] R-ATH-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119334 Ethylene biosynthesis from methionine none Arabidopsis thaliana AT3G61510 R-ATH-1129892-2 AT3G61510 [cytosol] R-ATH-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119624 Methionine salvage pathway none Arabidopsis thaliana AT3G61530 R-ATH-1129411 AT3G61530 [cytosol] R-ATH-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119496 Pantothenate biosynthesis I none Arabidopsis thaliana AT3G61530 R-ATH-1129411 AT3G61530 [cytosol] R-ATH-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119544 Pantothenate biosynthesis II none Arabidopsis thaliana AT3G62130 R-ATH-9612399 AT3G62130 [peroxisomal matrix] R-ATH-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119612 Cysteine degradation none Arabidopsis thaliana AT3G62130 R-ATH-9612380 AT3G62130 [cytosol] R-ATH-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119612 Cysteine degradation none Arabidopsis thaliana AT3G62720 R-ATH-9639810 AT3G62720 [cell wall] R-ATH-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639861 Development of root hair none Arabidopsis thaliana AT3G62980 R-ATH-5608164-2 AT3G62980 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT3G62980 R-ATH-5608164-2 AT3G62980 [nucleoplasm] R-ATH-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030557 Lateral root initiation none Arabidopsis thaliana AT3G62980 R-ATH-5608164-2 AT3G62980 [nucleoplasm] R-ATH-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9608575 Reproductive meristem phase change none Arabidopsis thaliana AT3G62980 R-ATH-9658967-2 AT3G62980 [cytosol] R-ATH-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9608575 Reproductive meristem phase change none Arabidopsis thaliana AT3G63010 R-ATH-5679398 AT3G63010 [cytosol] R-ATH-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5679411 Gibberellin signaling none Arabidopsis thaliana AT3G63080 R-ATH-1128534-2 AT3G63080 [cytosol] R-ATH-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119437 Glutathione redox reactions I none Arabidopsis thaliana AT3G63250 R-ATH-1128594 AT3G63250 [cytosol] R-ATH-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119349 S-methylmethionine cycle none Arabidopsis thaliana AT3G63250 R-ATH-1128594 AT3G63250 [cytosol] R-ATH-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119400 Methionine biosynthesis II none Arabidopsis thaliana AT3G63350 R-ATH-9924379 HSFA2D [nucleoplasm] R-ATH-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9924451 Shoot (tiller) formation and regulation of tiller angle none Arabidopsis thaliana AT3G63410 R-ATH-3321270 AT3G63410 [chloroplast inner membrane] R-ATH-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119287 Vitamin E biosynthesis none Arabidopsis thaliana AT3G63520 R-ATH-9609343 AT3G63520 [cytosol] R-ATH-9609352 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9609352 Lycopene catabolism none Arabidopsis thaliana AT4G00020 R-ATH-6788042 AT4G00020 [nucleoplasm] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT4G00110 R-ATH-1126421-3 AT4G00110 [cytosol] R-ATH-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis thaliana AT4G00110 R-ATH-1126421-3 AT4G00110 [cytosol] R-ATH-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis thaliana AT4G00570 R-ATH-5146758 AT4G00570 [mitochondrial matrix] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT4G00590 R-ATH-1125670 AT4G00590 [cytosol] R-ATH-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119393 Asparagine degradation I none Arabidopsis thaliana AT4G01180 R-ATH-9684723-2 AT4G01180 [cytosol] R-ATH-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9609102 Flower development none Arabidopsis thaliana AT4G01630 R-ATH-9916298 OsEXPA3 [extracellular region] R-ATH-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9916190 Root angle formation: elongation and curvature response none Arabidopsis thaliana AT4G01850 R-ATH-1128366 AT4G01850 [cytosol] R-ATH-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119334 Ethylene biosynthesis from methionine none Arabidopsis thaliana AT4G01850 R-ATH-1128366 AT4G01850 [cytosol] R-ATH-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119501 S-adenosyl-L-methionine cycle none Arabidopsis thaliana AT4G01850 R-ATH-1128366 AT4G01850 [cytosol] R-ATH-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119624 Methionine salvage pathway none Arabidopsis thaliana AT4G01850 R-ATH-9025738 AT4G01850 [cytosol] R-ATH-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9025754 Mugineic acid biosynthesis none Arabidopsis thaliana AT4G02060 R-ATH-9640745 AT4G02060 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT4G02060 R-ATH-9640745 AT4G02060 [nucleoplasm] R-ATH-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675824 DNA replication Initiation none Arabidopsis thaliana AT4G02280 R-ATH-1126115 AT4G02280 [cytosol] R-ATH-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119452 Galactose degradation II none Arabidopsis thaliana AT4G02280 R-ATH-1126115 AT4G02280 [cytosol] R-ATH-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119465 Sucrose biosynthesis none Arabidopsis thaliana AT4G02500 R-ATH-9639810-2 AT4G02500 [cell wall] R-ATH-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639861 Development of root hair none Arabidopsis thaliana AT4G02610 R-ATH-1129781 AT4G02610 [chloroplast] R-ATH-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119494 Tryptophan biosynthesis none Arabidopsis thaliana AT4G02670 R-ATH-8934084 AT4G02670 [nucleoplasm] R-ATH-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9928995 Drought escape (DE) via ABA-dependent pathway none Arabidopsis thaliana AT4G02780 R-ATH-1128337 AT4G02780 [plastid stroma] R-ATH-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119308 Momilactone biosynthesis none Arabidopsis thaliana AT4G02780 R-ATH-1128244 AT4G02780 [chloroplast] R-ATH-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119348 Ent-kaurene biosynthesis none Arabidopsis thaliana AT4G03080 R-ATH-5632341 AT4G03080 [cytosol] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT4G03080 R-ATH-5632221 phospho-AT4G03080 [cytosol] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT4G03080 R-ATH-5632170 phospho-AT4G03080 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT4G03190 R-ATH-5608164 AT4G03190 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT4G03190 R-ATH-5608164 AT4G03190 [nucleoplasm] R-ATH-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030557 Lateral root initiation none Arabidopsis thaliana AT4G03190 R-ATH-5608164 AT4G03190 [nucleoplasm] R-ATH-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9608575 Reproductive meristem phase change none Arabidopsis thaliana AT4G03190 R-ATH-9658967 AT4G03190 [cytosol] R-ATH-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9608575 Reproductive meristem phase change none Arabidopsis thaliana AT4G03950 R-ATH-9918175-2 AT4G03950 [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT4G04870 R-ATH-1127999 AT4G04870 [mitochondrial inner membrane] R-ATH-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119260 Cardiolipin biosynthesis none Arabidopsis thaliana AT4G04920 R-ATH-8879004 AT4G04920 [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT4G04930 R-ATH-9025541 AT4G04930 [endoplasmic reticulum membrane] R-ATH-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119325 Sphingolipid metabolism none Arabidopsis thaliana AT4G04955 R-ATH-9025224 AT4G04955 [endoplasmic reticulum lumen] R-ATH-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119502 Allantoin degradation none Arabidopsis thaliana AT4G06746 R-ATH-8879009 AT4G06746 [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT4G08040 R-ATH-1123895-4 AT4G08040 [cytosol] R-ATH-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119334 Ethylene biosynthesis from methionine none Arabidopsis thaliana AT4G08040 R-ATH-1123895-4 AT4G08040 [cytosol] R-ATH-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119624 Methionine salvage pathway none Arabidopsis thaliana AT4G08150 R-ATH-9826652 OSH15 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT4G08150 R-ATH-9631619 AT4G08150 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT4G08870 R-ATH-5631969-2 AT4G08870 [mitochondrial matrix] R-ATH-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119289 Arginine degradation none Arabidopsis thaliana AT4G08870 R-ATH-5633275-2 AT4G08870 [cytosol] R-ATH-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119495 Citrulline biosynthesis none Arabidopsis thaliana AT4G08900 R-ATH-5631969 AT4G08900 [mitochondrial matrix] R-ATH-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119289 Arginine degradation none Arabidopsis thaliana AT4G08900 R-ATH-5633275 AT4G08900 [cytosol] R-ATH-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119495 Citrulline biosynthesis none Arabidopsis thaliana AT4G08920 R-ATH-8933710 AT4G08920 [nucleoplasm] R-ATH-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8933811 Circadian rhythm none Arabidopsis thaliana AT4G09020 R-ATH-9918264 ISA3 [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT4G09510 R-ATH-9675481-2 AT4G09510 [cytosol] R-ATH-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030654 Primary root development none Arabidopsis thaliana AT4G09760 R-ATH-8854108-3 AT4G09760 [cytosol] R-ATH-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119556 Choline biosynthesis I none Arabidopsis thaliana AT4G09990 R-ATH-9916305-2 AT4G09990 [nucleoplasm] R-ATH-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9916190 Root angle formation: elongation and curvature response none Arabidopsis thaliana AT4G10380 R-ATH-9618171 AT4G10380 [plasma membrane] R-ATH-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9618218 Arsenic uptake and detoxification none Arabidopsis thaliana AT4G10960 R-ATH-1122936-2 AT4G10960 [cytosol] R-ATH-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119452 Galactose degradation II none Arabidopsis thaliana AT4G11110 R-ATH-8933788-2 AT4G11110 [nucleoplasm] R-ATH-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8933811 Circadian rhythm none Arabidopsis thaliana AT4G11330 R-ATH-6788007 AT4G11330 [cytosol] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT4G11600 R-ATH-1126615 AT4G11600 [cytosol] R-ATH-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119437 Glutathione redox reactions I none Arabidopsis thaliana AT4G11820 R-ATH-1128328 AT4G11820 [cytosol] R-ATH-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119615 Mevalonate pathway none Arabidopsis thaliana AT4G11830 R-ATH-1125610-3 AT4G11830 [cytosol] R-ATH-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119276 Choline biosynthesis III none Arabidopsis thaliana AT4G11840 R-ATH-1125610-2 AT4G11840 [cytosol] R-ATH-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119276 Choline biosynthesis III none Arabidopsis thaliana AT4G11850 R-ATH-1125610 AT4G11850 [cytosol] R-ATH-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119276 Choline biosynthesis III none Arabidopsis thaliana AT4G12620 R-ATH-9640675-2 AT4G12620 [nucleoplasm] R-ATH-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640882 Assembly of pre-replication complex none Arabidopsis thaliana AT4G12620 R-ATH-9640675-2 AT4G12620 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT4G13260 R-ATH-1124809 AT4G13260 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT4G13430 R-ATH-1124939 AT4G13430 [cytosol] R-ATH-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119540 Leucine biosynthesis none Arabidopsis thaliana AT4G13940 R-ATH-1129029-2 AT4G13940 [cytosol] R-ATH-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119501 S-adenosyl-L-methionine cycle none Arabidopsis thaliana AT4G14550 R-ATH-1122892 AT4G14550 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT4G14550 R-ATH-1122892 AT4G14550 [nucleoplasm] R-ATH-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030557 Lateral root initiation none Arabidopsis thaliana AT4G14550 R-ATH-1122892 AT4G14550 [nucleoplasm] R-ATH-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030654 Primary root development none Arabidopsis thaliana AT4G14680 R-ATH-1128257-3 AT4G14680 [plastid stroma] R-ATH-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119529 Sulfate activation for sulfonation none Arabidopsis thaliana AT4G14700 R-ATH-9640675 AT4G14700 [nucleoplasm] R-ATH-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640882 Assembly of pre-replication complex none Arabidopsis thaliana AT4G14700 R-ATH-9640675 AT4G14700 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT4G14880 R-ATH-1126794-2 AT4G14880 [cytosol] R-ATH-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119331 Cysteine biosynthesis I none Arabidopsis thaliana AT4G14910 R-ATH-1125584 AT4G14910 [plastid stroma] R-ATH-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119509 Histidine biosynthesis I none Arabidopsis thaliana AT4G15560 R-ATH-4723654-2 AT4G15560 [plastid stroma] R-ATH-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119464 Methylerythritol phosphate pathway none Arabidopsis thaliana AT4G15560 R-ATH-1130030-2 AT4G15560 [cytosol] R-ATH-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119594 Pyridoxal 5'-phosphate biosynthesis none Arabidopsis thaliana AT4G15560 R-ATH-1130030-2 AT4G15560 [cytosol] R-ATH-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119629 Thiamine biosynthesis none Arabidopsis thaliana AT4G15940 R-ATH-1129390-2 AT4G15940 [mitochondrion] R-ATH-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119506 tyrosine degradation I none Arabidopsis thaliana AT4G16130 R-ATH-1130281-2 AT4G16130 [cytosol] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT4G16250 R-ATH-8933856-2 AT4G16250 [nucleoplasm] R-ATH-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8933811 Circadian rhythm none Arabidopsis thaliana AT4G16250 R-ATH-8933748-2 AT4G16250 [cytosol] R-ATH-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8933811 Circadian rhythm none Arabidopsis thaliana AT4G16250 R-ATH-8933856-2 AT4G16250 [nucleoplasm] R-ATH-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934036 Long day regulated expression of florigens none Arabidopsis thaliana AT4G16250 R-ATH-8933856-2 AT4G16250 [nucleoplasm] R-ATH-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9928995 Drought escape (DE) via ABA-dependent pathway none Arabidopsis thaliana AT4G16430 R-ATH-6787066-2 AT4G16430 [nucleoplasm] R-ATH-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6787011 Jasmonic acid signaling none Arabidopsis thaliana AT4G16700 R-ATH-1127338 AT4G16700 [mitochondrial inner membrane] R-ATH-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119402 Phospholipid biosynthesis I none Arabidopsis thaliana AT4G16710 R-ATH-1129879 AT4G16710 [cytosol] R-ATH-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119436 Peptidoglycan biosynthesis I none Arabidopsis thaliana AT4G16745 R-ATH-1125340 AT4G16745 [plastid stroma] R-ATH-1119274 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119274 Monoterpene biosynthesis none Arabidopsis thaliana AT4G16745 R-ATH-1125340 AT4G16745 [plastid stroma] R-ATH-1119593 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119593 Oleoresin monoterpene volatiles biosynthesis none Arabidopsis thaliana AT4G16800 R-ATH-1126053 AT4G16800 [mitochondrial matrix] R-ATH-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119479 Valine degradation none Arabidopsis thaliana AT4G16845 R-ATH-9608930-2 AT4G16845 [nucleoplasm] R-ATH-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934036 Long day regulated expression of florigens none Arabidopsis thaliana AT4G17050 R-ATH-9658589 AT4G17050 [endoplasmic reticulum lumen] R-ATH-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119502 Allantoin degradation none Arabidopsis thaliana AT4G17190 R-ATH-1130006-2 AT4G17190 [plastid stroma] R-ATH-1119569 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119569 Kievitone biosynthesis none Arabidopsis thaliana AT4G17490 R-ATH-9930313 AT4G17490 [nucleoplasm] R-ATH-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9766881 TF network involved in salinity response none Arabidopsis thaliana AT4G17830 R-ATH-5138481 AT4G17830 [plastid stroma] R-ATH-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119263 Arginine biosynthesis none Arabidopsis thaliana AT4G17830 R-ATH-5138481 AT4G17830 [plastid stroma] R-ATH-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119539 Ornithine biosynthesis none Arabidopsis thaliana AT4G17880 R-ATH-6787119-3 AT4G17880 [nucleoplasm] R-ATH-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6787011 Jasmonic acid signaling none Arabidopsis thaliana AT4G18240 R-ATH-1129175 AT4G18240 [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT4G18290 R-ATH-4415060 AT4G18290 [plasma membrane] R-ATH-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis thaliana AT4G18290 R-ATH-4415065 phospho-AT4G18290 [plasma membrane] R-ATH-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis thaliana AT4G18350 R-ATH-5221144 AT4G18350 [plastid] R-ATH-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119374 Abscisic acid biosynthesis none Arabidopsis thaliana AT4G18390 R-ATH-9826635-2 PCF8 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT4G18590 R-ATH-9646016 AT4G18590 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT4G18590 R-ATH-9646016 AT4G18590 [nucleoplasm] R-ATH-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675782 Maturation none Arabidopsis thaliana AT4G18590 R-ATH-9646016 AT4G18590 [nucleoplasm] R-ATH-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675885 Lagging strand synthesis none Arabidopsis thaliana AT4G18710 R-ATH-5632139-3 AT4G18710 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT4G18780 R-ATH-1124491 AT4G18780 [plasma membrane] R-ATH-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119314 Cellulose biosynthesis none Arabidopsis thaliana AT4G18910 R-ATH-9618197-2 AT4G18910 [plasma membrane] R-ATH-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9618218 Arsenic uptake and detoxification none Arabidopsis thaliana AT4G18960 R-ATH-8986675 AT4G18960 [nucleoplasm] R-ATH-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9609102 Flower development none Arabidopsis thaliana AT4G19030 R-ATH-9618197-3 AT4G19030 [plasma membrane] R-ATH-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9618218 Arsenic uptake and detoxification none Arabidopsis thaliana AT4G19170 R-ATH-9924558 NCED1 [plastid] R-ATH-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Arabidopsis thaliana AT4G19230 R-ATH-1128857-2 AT4G19230 [cytosol] R-ATH-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119609 Phaseic acid biosynthesis none Arabidopsis thaliana AT4G19640 R-ATH-9626337 AT4G19640 [Golgi-associated vesicle] R-ATH-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9626305 Regulatory network of nutrient accumulation none Arabidopsis thaliana AT4G19660 R-ATH-6788026-2 AT4G19660 [cytosol] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT4G19710 R-ATH-1125926-2 AT4G19710 [cytosol] R-ATH-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119273 Lysine biosynthesis I none Arabidopsis thaliana AT4G19710 R-ATH-1125926-2 AT4G19710 [cytosol] R-ATH-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119283 Lysine biosynthesis II none Arabidopsis thaliana AT4G19710 R-ATH-1125926-2 AT4G19710 [cytosol] R-ATH-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119295 Homoserine biosynthesis none Arabidopsis thaliana AT4G19710 R-ATH-5606498-2 AT4G19710 [plastid stroma] R-ATH-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119419 Lysine biosynthesis VI none Arabidopsis thaliana AT4G20070 R-ATH-9658573 AT4G20070 [endoplasmic reticulum lumen] R-ATH-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119502 Allantoin degradation none Arabidopsis thaliana AT4G20460 R-ATH-1125489-3 AT4G20460 [Golgi membrane] R-ATH-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis thaliana AT4G20460 R-ATH-1127743-3 AT4G20460 [cytosol] R-ATH-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis thaliana AT4G20460 R-ATH-1125489-3 AT4G20460 [Golgi membrane] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT4G20460 R-ATH-1125489-3 AT4G20460 [Golgi membrane] R-ATH-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis thaliana AT4G20460 R-ATH-1127743-3 AT4G20460 [cytosol] R-ATH-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis thaliana AT4G20930 R-ATH-1128624 AT4G20930 [mitochondrial inner membrane] R-ATH-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119479 Valine degradation none Arabidopsis thaliana AT4G20960 R-ATH-1125834 AT4G20960 [cytosol] R-ATH-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119379 Flavin biosynthesis none Arabidopsis thaliana AT4G21060 R-ATH-1122605 AT4G21060 [cytosol] R-ATH-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119341 Galactosylcyclitol biosynthesis none Arabidopsis thaliana AT4G21200 R-ATH-1128069 AT4G21200 [cytosol] R-ATH-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Arabidopsis thaliana AT4G21200 R-ATH-1128069 AT4G21200 [cytosol] R-ATH-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Arabidopsis thaliana AT4G21470 R-ATH-1129569 AT4G21470 [cytosol] R-ATH-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119379 Flavin biosynthesis none Arabidopsis thaliana AT4G21534 R-ATH-9025487-2 AT4G21534 [cytosol] R-ATH-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119325 Sphingolipid metabolism none Arabidopsis thaliana AT4G21540 R-ATH-9025487 AT4G21540 [cytosol] R-ATH-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119325 Sphingolipid metabolism none Arabidopsis thaliana AT4G22340 R-ATH-1123745-3 AT4G22340 [endoplasmic reticulum membrane] R-ATH-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119260 Cardiolipin biosynthesis none Arabidopsis thaliana AT4G22340 R-ATH-1123745-3 AT4G22340 [endoplasmic reticulum membrane] R-ATH-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119402 Phospholipid biosynthesis I none Arabidopsis thaliana AT4G22880 R-ATH-1130078 AT4G22880 [cytosol] R-ATH-1119440 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119440 Anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside) none Arabidopsis thaliana AT4G22880 R-ATH-2672102 AT4G22880 [cytosol] R-ATH-1119514 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119514 Anthocyanin biosynthesis (delphinidin 3-O-glucoside) none Arabidopsis thaliana AT4G23590 R-ATH-1129547-7 AT4G23590 [cytosol] R-ATH-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119389 Phenylalanine biosynthesis I none Arabidopsis thaliana AT4G23590 R-ATH-1129547-7 AT4G23590 [cytosol] R-ATH-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119400 Methionine biosynthesis II none Arabidopsis thaliana AT4G23590 R-ATH-1129547-7 AT4G23590 [cytosol] R-ATH-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119506 tyrosine degradation I none Arabidopsis thaliana AT4G23600 R-ATH-1129547-2 AT4G23600 [cytosol] R-ATH-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119389 Phenylalanine biosynthesis I none Arabidopsis thaliana AT4G23600 R-ATH-1129547-2 AT4G23600 [cytosol] R-ATH-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119400 Methionine biosynthesis II none Arabidopsis thaliana AT4G23600 R-ATH-1129547-2 AT4G23600 [cytosol] R-ATH-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119506 tyrosine degradation I none Arabidopsis thaliana AT4G23660 R-ATH-1125612 AT4G23660 [cytosol] R-ATH-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119353 Linear furanocoumarin biosynthesis none Arabidopsis thaliana AT4G23920 R-ATH-1122936 AT4G23920 [cytosol] R-ATH-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119452 Galactose degradation II none Arabidopsis thaliana AT4G24040 R-ATH-1124788 AT4G24040 [cytosol] R-ATH-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119601 Trehalose degradation II none Arabidopsis thaliana AT4G24120 R-ATH-9025699-2 AT4G24120 [plasma membrane] R-ATH-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8858053 Polar auxin transport none Arabidopsis thaliana AT4G24120 R-ATH-9025699-2 AT4G24120 [plasma membrane] R-ATH-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9025727 Iron uptake and transport in root vascular system none Arabidopsis thaliana AT4G24390 R-ATH-5608140-2 AT4G24390 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT4G24620 R-ATH-2960195 AT4G24620 [cytosol] R-ATH-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119410 Ascorbate biosynthesis none Arabidopsis thaliana AT4G24620 R-ATH-2960195 AT4G24620 [cytosol] R-ATH-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119570 Cytosolic glycolysis none Arabidopsis thaliana AT4G24670 R-ATH-1126549 AT4G24670 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT4G24830 R-ATH-5138489 AT4G24830 [plastid stroma] R-ATH-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119263 Arginine biosynthesis none Arabidopsis thaliana AT4G24830 R-ATH-1127893 AT4G24830 [cytosol] R-ATH-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119444 Canavanine biosynthesis none Arabidopsis thaliana AT4G24830 R-ATH-5138489 AT4G24830 [plastid stroma] R-ATH-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119622 Arginine biosynthesis II (acetyl cycle) none Arabidopsis thaliana AT4G24830 R-ATH-5138489 AT4G24830 [plastid stroma] R-ATH-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5633340 Citrulline-nitric oxide cycle none Arabidopsis thaliana AT4G25100 R-ATH-1125399 AT4G25100 [plastid] R-ATH-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119403 Removal of superoxide radicals none Arabidopsis thaliana AT4G25470 R-ATH-8879029-5 DREB1G [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT4G25470 R-ATH-8879071-5 CBF1 homolog [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT4G25470 R-ATH-8879085-5 AT4G25470 [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT4G25480 R-ATH-8879029-4 DREB1G [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT4G25480 R-ATH-8879071-4 CBF1 homolog [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT4G25480 R-ATH-8879085-4 AT4G25480 [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT4G25490 R-ATH-8879029-3 DREB1G [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT4G25490 R-ATH-8879071-3 CBF1 homolog [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT4G25490 R-ATH-8879085-3 AT4G25490 [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT4G25970 R-ATH-1126488 AT4G25970 [mitochondrial inner membrane] R-ATH-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119402 Phospholipid biosynthesis I none Arabidopsis thaliana AT4G26200 R-ATH-1127015 AT4G26200 [cytosol] R-ATH-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119334 Ethylene biosynthesis from methionine none Arabidopsis thaliana AT4G26200 R-ATH-1127015 AT4G26200 [cytosol] R-ATH-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119624 Methionine salvage pathway none Arabidopsis thaliana AT4G26260 R-ATH-1127523-2 AT4G26260 [cytosol] R-ATH-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Arabidopsis thaliana AT4G26520 R-ATH-5149694 AT4G26520 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT4G26530 R-ATH-5149694-2 AT4G26530 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT4G26720 R-ATH-5632251-2 AT4G26720 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT4G26770 R-ATH-1123745 AT4G26770 [endoplasmic reticulum membrane] R-ATH-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119260 Cardiolipin biosynthesis none Arabidopsis thaliana AT4G26770 R-ATH-1123745 AT4G26770 [endoplasmic reticulum membrane] R-ATH-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119402 Phospholipid biosynthesis I none Arabidopsis thaliana AT4G26910 R-ATH-1128606-2 AT4G26910 [mitochondrial matrix] R-ATH-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119365 Lysine degradation II none Arabidopsis thaliana AT4G26910 R-ATH-1173244-2 AT4G26910 [mitochondrial matrix] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT4G27070 R-ATH-1129867 AT4G27070 [chloroplast] R-ATH-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119494 Tryptophan biosynthesis none Arabidopsis thaliana AT4G28410 R-ATH-1129547 AT4G28410 [cytosol] R-ATH-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119389 Phenylalanine biosynthesis I none Arabidopsis thaliana AT4G28410 R-ATH-1129547 AT4G28410 [cytosol] R-ATH-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119400 Methionine biosynthesis II none Arabidopsis thaliana AT4G28410 R-ATH-1129547 AT4G28410 [cytosol] R-ATH-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119506 tyrosine degradation I none Arabidopsis thaliana AT4G28420 R-ATH-1129547-4 AT4G28420 [cytosol] R-ATH-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119389 Phenylalanine biosynthesis I none Arabidopsis thaliana AT4G28420 R-ATH-1129547-4 AT4G28420 [cytosol] R-ATH-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119400 Methionine biosynthesis II none Arabidopsis thaliana AT4G28420 R-ATH-1129547-4 AT4G28420 [cytosol] R-ATH-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119506 tyrosine degradation I none Arabidopsis thaliana AT4G28640 R-ATH-1128385-3 AT4G28640 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT4G28680 R-ATH-1122881 AT4G28680 [cytosol] R-ATH-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Arabidopsis thaliana AT4G28680 R-ATH-1122881 AT4G28680 [cytosol] R-ATH-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119438 Secologanin and strictosidine biosynthesis none Arabidopsis thaliana AT4G28680 R-ATH-1122881 AT4G28680 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT4G28910 R-ATH-6786999 AT4G28910 [nucleoplasm] R-ATH-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6787011 Jasmonic acid signaling none Arabidopsis thaliana AT4G28950 R-ATH-9611557 RAC1 [plasma membrane] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT4G29010 R-ATH-5633387 AT4G29010 [mitochondrial matrix] R-ATH-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119445 Beta-alanine biosynthesis II none Arabidopsis thaliana AT4G29080 R-ATH-5608120 AT4G29080 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT4G29720 R-ATH-9658664 AT4G29720 [plasma membrane] R-ATH-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119567 Beta-alanine biosynthesis I none Arabidopsis thaliana AT4G29840 R-ATH-1130059-2 AT4G29840 [cytosol] R-ATH-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119262 Threonine biosynthesis from homoserine none Arabidopsis thaliana AT4G29910 R-ATH-9640694 AT4G29910 [nucleoplasm] R-ATH-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640882 Assembly of pre-replication complex none Arabidopsis thaliana AT4G29910 R-ATH-9640694 AT4G29910 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT4G29930 R-ATH-9826615 RERJ1 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT4G30000 R-ATH-1129585-2 AT4G30000 [cytosol] R-ATH-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119265 Tetrahydrofolate biosynthesis I none Arabidopsis thaliana AT4G30000 R-ATH-1129585-2 AT4G30000 [cytosol] R-ATH-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119523 Tetrahydrofolate biosynthesis II none Arabidopsis thaliana AT4G30080 R-ATH-5608161 AT4G30080 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT4G30200 R-ATH-9920292-2 AT4G30200 [nucleoplasm] R-ATH-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934108 Short day regulated expression of florigens none Arabidopsis thaliana AT4G30310 R-ATH-1122463 AT4G30310 [cytosol] R-ATH-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119321 Glycerol degradation I none Arabidopsis thaliana AT4G30440 R-ATH-1129203 AT4G30440 [cytosol] R-ATH-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis thaliana AT4G30440 R-ATH-1129203 AT4G30440 [cytosol] R-ATH-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis thaliana AT4G30580 R-ATH-1123296 AT4G30580 [chloroplast envelope] R-ATH-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119402 Phospholipid biosynthesis I none Arabidopsis thaliana AT4G30950 R-ATH-1123148 AT4G30950 [cytosol] R-ATH-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119300 Glycolipid desaturation none Arabidopsis thaliana AT4G31550 R-ATH-6788065 AT4G31550 [nucleoplasm] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT4G31800 R-ATH-6787933-3 AT4G31800 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT4G31810 R-ATH-1128054 AT4G31810 [mitochondrial matrix] R-ATH-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119479 Valine degradation none Arabidopsis thaliana AT4G31870 R-ATH-1128173 AT4G31870 [cytosol] R-ATH-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119437 Glutathione redox reactions I none Arabidopsis thaliana AT4G31990 R-ATH-1123797 AT4G31990 [cytosol] R-ATH-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119281 Aspartate biosynthesis I none Arabidopsis thaliana AT4G31990 R-ATH-5632003 AT4G31990 [plastid stroma] R-ATH-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119553 Asparagine biosynthesis none Arabidopsis thaliana AT4G32120 R-ATH-1129485-2 AT4G32120 [cytosol] R-ATH-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119341 Galactosylcyclitol biosynthesis none Arabidopsis thaliana AT4G32180 R-ATH-1127502 AT4G32180 [cytosol] R-ATH-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119394 Pantothenate and coenzyme A biosynthesis III none Arabidopsis thaliana AT4G32390 R-ATH-9681915-4 AT4G32390 [Golgi membrane] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT4G32410 R-ATH-1130088-2 AT4G32410 [plasma membrane] R-ATH-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119314 Cellulose biosynthesis none Arabidopsis thaliana AT4G32540 R-ATH-1126875 AT4G32540 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT4G32810 R-ATH-5367761 AT4G32810 [plastid stroma] R-ATH-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5367729 Strigolactone biosynthesis none Arabidopsis thaliana AT4G33010 R-ATH-8987557-2 AT4G33010 [mitochondrial matrix] R-ATH-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119312 Photorespiration none Arabidopsis thaliana AT4G33070 R-ATH-9025294-3 AT4G33070 [cytosol] R-ATH-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119267 Phenylalanine degradation III none Arabidopsis thaliana AT4G33070 R-ATH-1124944-2 AT4G33070 [plastid stroma] R-ATH-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119460 Isoleucine biosynthesis from threonine none Arabidopsis thaliana AT4G33070 R-ATH-1127774-3 AT4G33070 [cytosol] R-ATH-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119460 Isoleucine biosynthesis from threonine none Arabidopsis thaliana AT4G33070 R-ATH-1124944-2 AT4G33070 [plastid stroma] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT4G33070 R-ATH-1127774-3 AT4G33070 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT4G33070 R-ATH-1124944-2 AT4G33070 [plastid stroma] R-ATH-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119502 Allantoin degradation none Arabidopsis thaliana AT4G33070 R-ATH-1124944-2 AT4G33070 [plastid stroma] R-ATH-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119600 Valine biosynthesis none Arabidopsis thaliana AT4G33070 R-ATH-1127774-3 AT4G33070 [cytosol] R-ATH-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119600 Valine biosynthesis none Arabidopsis thaliana AT4G33150 R-ATH-1129571 AT4G33150 [mitochondrion] R-ATH-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119365 Lysine degradation II none Arabidopsis thaliana AT4G33330 R-ATH-5654911 AT4G33330 [Golgi lumen] R-ATH-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5654909 Xylan biosynthesis none Arabidopsis thaliana AT4G33360 R-ATH-1124249 AT4G33360 [cytosol] R-ATH-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis thaliana AT4G33360 R-ATH-1124249 AT4G33360 [cytosol] R-ATH-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis thaliana AT4G33510 R-ATH-1125832-2 AT4G33510 [plastid stroma] R-ATH-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119430 Chorismate biosynthesis none Arabidopsis thaliana AT4G33580 R-ATH-1128980-2 AT4G33580 [cytosol] R-ATH-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119586 Cyanate degradation none Arabidopsis thaliana AT4G33670 R-ATH-9682527 AT4G33670 [cytosol] R-ATH-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119410 Ascorbate biosynthesis none Arabidopsis thaliana AT4G33680 R-ATH-5606478 AT4G33680 [plastid stroma] R-ATH-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119419 Lysine biosynthesis VI none Arabidopsis thaliana AT4G33770 R-ATH-9639029 AT4G33770 [cytosol] R-ATH-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119434 Phytic acid biosynthesis (lipid-independent) none Arabidopsis thaliana AT4G33925 R-ATH-6788084 AT4G33925 [nucleoplasm] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT4G33950 R-ATH-4415007-2 AT4G33950 [cytosol] R-ATH-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis thaliana AT4G33950 R-ATH-4415016-2 phospho-AT4G33950 [cytosol] R-ATH-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis thaliana AT4G33950 R-ATH-4415007-2 AT4G33950 [cytosol] R-ATH-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639861 Development of root hair none Arabidopsis thaliana AT4G34000 R-ATH-9928801-3 AT4G34000 [nucleoplasm] R-ATH-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9928995 Drought escape (DE) via ABA-dependent pathway none Arabidopsis thaliana AT4G34040 R-ATH-9920344 AT4G34040 [nucleoplasm] R-ATH-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934108 Short day regulated expression of florigens none Arabidopsis thaliana AT4G34160 R-ATH-9640671 AT4G34160 [nucleoplasm] R-ATH-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640760 G1 phase none Arabidopsis thaliana AT4G34160 R-ATH-9640671 AT4G34160 [nucleoplasm] R-ATH-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640887 G1/S transition none Arabidopsis thaliana AT4G34230 R-ATH-1125967-2 AT4G34230 [cytosol] R-ATH-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119316 Phenylpropanoid biosynthesis none Arabidopsis thaliana AT4G34350 R-ATH-1128745 AT4G34350 [plastid stroma] R-ATH-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119464 Methylerythritol phosphate pathway none Arabidopsis thaliana AT4G34640 R-ATH-1128707 AT4G34640 [cytosol] R-ATH-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Arabidopsis thaliana AT4G34640 R-ATH-1128707 AT4G34640 [cytosol] R-ATH-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119370 Sterol biosynthesis none Arabidopsis thaliana AT4G34640 R-ATH-1128707 AT4G34640 [cytosol] R-ATH-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119439 Cholesterol biosynthesis III (via desmosterol) none Arabidopsis thaliana AT4G34640 R-ATH-1128707 AT4G34640 [cytosol] R-ATH-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119559 Cholesterol biosynthesis I none Arabidopsis thaliana AT4G34650 R-ATH-1128707-2 AT4G34650 [cytosol] R-ATH-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Arabidopsis thaliana AT4G34650 R-ATH-1128707-2 AT4G34650 [cytosol] R-ATH-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119370 Sterol biosynthesis none Arabidopsis thaliana AT4G34650 R-ATH-1128707-2 AT4G34650 [cytosol] R-ATH-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119439 Cholesterol biosynthesis III (via desmosterol) none Arabidopsis thaliana AT4G34650 R-ATH-1128707-2 AT4G34650 [cytosol] R-ATH-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119559 Cholesterol biosynthesis I none Arabidopsis thaliana AT4G34710 R-ATH-1123832-2 AT4G34710 [cytosol] R-ATH-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119304 Putrescine biosynthesis II none Arabidopsis thaliana AT4G34710 R-ATH-1123832-2 AT4G34710 [cytosol] R-ATH-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119447 Putrescine biosynthesis I none Arabidopsis thaliana AT4G34840 R-ATH-1123561-2 AT4G34840 [cytosol] R-ATH-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119624 Methionine salvage pathway none Arabidopsis thaliana AT4G34890 R-ATH-1129600 AT4G34890 [cytosol] R-ATH-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119407 Ureide biosynthesis none Arabidopsis thaliana AT4G34900 R-ATH-1129600-2 AT4G34900 [cytosol] R-ATH-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119407 Ureide biosynthesis none Arabidopsis thaliana AT4G35100 R-ATH-9618156 AT4G35100 [plasma membrane] R-ATH-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9618218 Arsenic uptake and detoxification none Arabidopsis thaliana AT4G35230 R-ATH-5632232 phospho-AT4G35230 [plasma membrane] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT4G35250 R-ATH-1127357 AT4G35250 [cytosol] R-ATH-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119273 Lysine biosynthesis I none Arabidopsis thaliana AT4G35250 R-ATH-1127357 AT4G35250 [cytosol] R-ATH-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119283 Lysine biosynthesis II none Arabidopsis thaliana AT4G35310 R-ATH-5221147-2 AT4G35310 [cytosol] R-ATH-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis thaliana AT4G35360 R-ATH-1130152 AT4G35360 [cytosol] R-ATH-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119394 Pantothenate and coenzyme A biosynthesis III none Arabidopsis thaliana AT4G35390 R-ATH-9826666 AT4G35390 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT4G35640 R-ATH-1128641-2 AT4G35640 [cytosol] R-ATH-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119331 Cysteine biosynthesis I none Arabidopsis thaliana AT4G35650 R-ATH-1130141 AT4G35650 [mitochondrial matrix] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT4G35650 R-ATH-1130141 AT4G35650 [mitochondrial matrix] R-ATH-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119540 Leucine biosynthesis none Arabidopsis thaliana AT4G35790 R-ATH-1129187 AT4G35790 [cytosol] R-ATH-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119276 Choline biosynthesis III none Arabidopsis thaliana AT4G35830 R-ATH-1130136 AT4G35830 [mitochondrial matrix] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT4G35830 R-ATH-1130136 AT4G35830 [mitochondrial matrix] R-ATH-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119540 Leucine biosynthesis none Arabidopsis thaliana AT4G36220 R-ATH-1128613 AT4G36220 [cytosol] R-ATH-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119316 Phenylpropanoid biosynthesis none Arabidopsis thaliana AT4G36250 R-ATH-9658643 AT4G36250 [cytosol] R-ATH-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119567 Beta-alanine biosynthesis I none Arabidopsis thaliana AT4G36480 R-ATH-9025513 AT4G36480 [endoplasmic reticulum membrane] R-ATH-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119325 Sphingolipid metabolism none Arabidopsis thaliana AT4G36480 R-ATH-1129700 AT4G36480 [cytosol] R-ATH-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119610 Biotin biosynthesis II none Arabidopsis thaliana AT4G36490 R-ATH-9639957-2 AT4G36490 [plasma membrane] R-ATH-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639861 Development of root hair none Arabidopsis thaliana AT4G36610 R-ATH-1127815-2 AT4G36610 [cytosol] R-ATH-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119450 Homocysteine biosynthesis none Arabidopsis thaliana AT4G36740 R-ATH-9826620-2 HOX12/ OsGT1 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT4G36740 R-ATH-9826620-2 HOX12/ OsGT1 [nucleoplasm] R-ATH-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Arabidopsis thaliana AT4G36780 R-ATH-5632334-4 AT4G36780 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT4G36780 R-ATH-5632197-4 phospho-AT4G36780 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT4G36780 R-ATH-5632183-4 phospho-AT4G36780 [cytosol] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT4G36780 R-ATH-5632334-4 AT4G36780 [nucleoplasm] R-ATH-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5679411 Gibberellin signaling none Arabidopsis thaliana AT4G36900 R-ATH-8879009-4 AT4G36900 [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT4G37670 R-ATH-9658611 AT4G37670 [plastid stroma] R-ATH-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119263 Arginine biosynthesis none Arabidopsis thaliana AT4G37670 R-ATH-9658611 AT4G37670 [plastid stroma] R-ATH-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119539 Ornithine biosynthesis none Arabidopsis thaliana AT4G37670 R-ATH-9658611 AT4G37670 [plastid stroma] R-ATH-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119622 Arginine biosynthesis II (acetyl cycle) none Arabidopsis thaliana AT4G37690 R-ATH-5655075-2 AT4G37690 [Golgi lumen] R-ATH-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5655101 Xyloglucan biosynthesis none Arabidopsis thaliana AT4G37740 R-ATH-9035593-2 AT4G37740 [cytosol] R-ATH-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9035605 Regulation of seed size none Arabidopsis thaliana AT4G37740 R-ATH-9035634-2 AT4G37740 [nucleoplasm] R-ATH-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9035605 Regulation of seed size none Arabidopsis thaliana AT4G37740 R-ATH-9035593-2 AT4G37740 [cytosol] R-ATH-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9608575 Reproductive meristem phase change none Arabidopsis thaliana AT4G37740 R-ATH-9035634-2 AT4G37740 [nucleoplasm] R-ATH-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9608575 Reproductive meristem phase change none Arabidopsis thaliana AT4G37770 R-ATH-1123895-3 AT4G37770 [cytosol] R-ATH-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119334 Ethylene biosynthesis from methionine none Arabidopsis thaliana AT4G37770 R-ATH-1123895-3 AT4G37770 [cytosol] R-ATH-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119624 Methionine salvage pathway none Arabidopsis thaliana AT4G37930 R-ATH-8987575 AT4G37930 [mitochondrial matrix] R-ATH-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119311 Glycine biosynthesis I none Arabidopsis thaliana AT4G38130 R-ATH-6787113 AT4G38130 [nucleoplasm] R-ATH-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6787011 Jasmonic acid signaling none Arabidopsis thaliana AT4G38190 R-ATH-1127820 AT4G38190 [plasma membrane] R-ATH-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119314 Cellulose biosynthesis none Arabidopsis thaliana AT4G38230 R-ATH-5221147-3 AT4G38230 [cytosol] R-ATH-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis thaliana AT4G38740 R-ATH-9675293 AT4G38740 [nucleoplasm] R-ATH-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030557 Lateral root initiation none Arabidopsis thaliana AT4G38800 R-ATH-1123561 AT4G38800 [cytosol] R-ATH-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119624 Methionine salvage pathway none Arabidopsis thaliana AT4G39070 R-ATH-9826692 AT4G39070 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT4G39120 R-ATH-4788601 AT4G39120 [plastid stroma] R-ATH-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119509 Histidine biosynthesis I none Arabidopsis thaliana AT4G39210 R-ATH-1127562-2 AT4G39210 [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT4G39210 R-ATH-1130466-2 AT4G39210 [cytosol] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT4G39230 R-ATH-1123717-5 AT4G39230 [cytosol] R-ATH-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119395 Maackiain biosynthesis none Arabidopsis thaliana AT4G39230 R-ATH-1123717-5 AT4G39230 [cytosol] R-ATH-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119453 Medicarpin biosynthesis none Arabidopsis thaliana AT4G39540 R-ATH-1130308-2 AT4G39540 [plastid stroma] R-ATH-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119430 Chorismate biosynthesis none Arabidopsis thaliana AT4G39800 R-ATH-1129964 AT4G39800 [cytosol] R-ATH-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119378 Myo-inositol biosynthesis none Arabidopsis thaliana AT4G39800 R-ATH-1129964 AT4G39800 [cytosol] R-ATH-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119434 Phytic acid biosynthesis (lipid-independent) none Arabidopsis thaliana AT4G39950 R-ATH-1130084-6 AT4G39950 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT4G39980 R-ATH-1125832 AT4G39980 [plastid stroma] R-ATH-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119430 Chorismate biosynthesis none Arabidopsis thaliana AT4G40010 R-ATH-9766892 SAPK1 [nucleoplasm] R-ATH-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9766881 TF network involved in salinity response none Arabidopsis thaliana AT5G01240 R-ATH-8858070 AT5G01240 [plasma membrane] R-ATH-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639861 Development of root hair none Arabidopsis thaliana AT5G01320 R-ATH-9025294-4 AT5G01320 [cytosol] R-ATH-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119267 Phenylalanine degradation III none Arabidopsis thaliana AT5G01320 R-ATH-1124944-4 AT5G01320 [plastid stroma] R-ATH-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119460 Isoleucine biosynthesis from threonine none Arabidopsis thaliana AT5G01320 R-ATH-1127774-4 AT5G01320 [cytosol] R-ATH-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119460 Isoleucine biosynthesis from threonine none Arabidopsis thaliana AT5G01320 R-ATH-1124944-4 AT5G01320 [plastid stroma] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT5G01320 R-ATH-1127774-4 AT5G01320 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT5G01320 R-ATH-1124944-4 AT5G01320 [plastid stroma] R-ATH-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119502 Allantoin degradation none Arabidopsis thaliana AT5G01320 R-ATH-1124944-4 AT5G01320 [plastid stroma] R-ATH-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119600 Valine biosynthesis none Arabidopsis thaliana AT5G01320 R-ATH-1127774-4 AT5G01320 [cytosol] R-ATH-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119600 Valine biosynthesis none Arabidopsis thaliana AT5G01330 R-ATH-9025294 AT5G01330 [cytosol] R-ATH-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119267 Phenylalanine degradation III none Arabidopsis thaliana AT5G01330 R-ATH-1124944-3 AT5G01330 [plastid stroma] R-ATH-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119460 Isoleucine biosynthesis from threonine none Arabidopsis thaliana AT5G01330 R-ATH-1127774-2 AT5G01330 [cytosol] R-ATH-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119460 Isoleucine biosynthesis from threonine none Arabidopsis thaliana AT5G01330 R-ATH-1124944-3 AT5G01330 [plastid stroma] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT5G01330 R-ATH-1127774-2 AT5G01330 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT5G01330 R-ATH-1124944-3 AT5G01330 [plastid stroma] R-ATH-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119502 Allantoin degradation none Arabidopsis thaliana AT5G01330 R-ATH-1124944-3 AT5G01330 [plastid stroma] R-ATH-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119600 Valine biosynthesis none Arabidopsis thaliana AT5G01330 R-ATH-1127774-2 AT5G01330 [cytosol] R-ATH-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119600 Valine biosynthesis none Arabidopsis thaliana AT5G01630 R-ATH-6788042-2 AT5G01630 [nucleoplasm] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT5G01990 R-ATH-8868904 AT5G01990 [endoplasmic reticulum membrane] R-ATH-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8868949 Intracellular auxin transport none Arabidopsis thaliana AT5G02470 R-ATH-9640723 AT5G02470 [nucleoplasm] R-ATH-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640887 G1/S transition none Arabidopsis thaliana AT5G03290 R-ATH-1129851 AT5G03290 [mitochondrial matrix] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT5G03290 R-ATH-1129851 AT5G03290 [mitochondrial matrix] R-ATH-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119540 Leucine biosynthesis none Arabidopsis thaliana AT5G03415 R-ATH-9640698 AT5G03415 [nucleoplasm] R-ATH-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640887 G1/S transition none Arabidopsis thaliana AT5G03650 R-ATH-1124067-2 AT5G03650 [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT5G03650 R-ATH-9626520-2 AT5G03650 [plastid stroma] R-ATH-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9626305 Regulatory network of nutrient accumulation none Arabidopsis thaliana AT5G03690 R-ATH-5149646-2 AT5G03690 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT5G03690 R-ATH-1126652-2 AT5G03690 [cytosol] R-ATH-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119570 Cytosolic glycolysis none Arabidopsis thaliana AT5G03795 R-ATH-5655007-2 AT5G03795 [Golgi lumen] R-ATH-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5655010 Xylogalacturonan biosynthesis none Arabidopsis thaliana AT5G03840 R-ATH-9608694-2 AT5G03840 [cytosol] R-ATH-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9928831 Severe drought none Arabidopsis thaliana AT5G03840 R-ATH-9928774-2 AT5G03840 [nucleoplasm] R-ATH-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9928831 Severe drought none Arabidopsis thaliana AT5G04140 R-ATH-5603891 AT5G04140 [plastid stroma] R-ATH-1119420 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119420 Glutamate biosynthesis V none Arabidopsis thaliana AT5G04140 R-ATH-1125410 AT5G04140 [chloroplast stroma] R-ATH-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119443 Ammonia assimilation cycle none Arabidopsis thaliana AT5G04230 R-ATH-1130235-2 AT5G04230 [cytosol] R-ATH-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119261 Salicylate biosynthesis none Arabidopsis thaliana AT5G04230 R-ATH-1130235-2 AT5G04230 [cytosol] R-ATH-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119418 Suberin biosynthesis none Arabidopsis thaliana AT5G04230 R-ATH-1130235-2 AT5G04230 [cytosol] R-ATH-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119582 Phenylpropanoid biosynthesis, initial reactions none Arabidopsis thaliana AT5G04330 R-ATH-1128613-2 AT5G04330 [cytosol] R-ATH-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119316 Phenylpropanoid biosynthesis none Arabidopsis thaliana AT5G04360 R-ATH-9918273 AT5G04360 [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT5G04360 R-ATH-9626376 AT5G04360 [plastid stroma] R-ATH-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9626305 Regulatory network of nutrient accumulation none Arabidopsis thaliana AT5G04950 R-ATH-9025712 AT5G04950 [cytosol] R-ATH-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9025754 Mugineic acid biosynthesis none Arabidopsis thaliana AT5G05170 R-ATH-1123087 AT5G05170 [plasma membrane] R-ATH-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119314 Cellulose biosynthesis none Arabidopsis thaliana AT5G05580 R-ATH-1129616-2 AT5G05580 [cytosol] R-ATH-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119300 Glycolipid desaturation none Arabidopsis thaliana AT5G05590 R-ATH-1129723-3 AT5G05590 [chloroplast] R-ATH-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119494 Tryptophan biosynthesis none Arabidopsis thaliana AT5G05730 R-ATH-1123998 AT5G05730 [chloroplast] R-ATH-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119494 Tryptophan biosynthesis none Arabidopsis thaliana AT5G05820 R-ATH-9681885 AT5G05820 [Golgi membrane] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT5G05860 R-ATH-1123470-7 AT5G05860 [cytosol] R-ATH-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis thaliana AT5G05860 R-ATH-1123470-7 AT5G05860 [cytosol] R-ATH-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis thaliana AT5G05860 R-ATH-1123470-7 AT5G05860 [cytosol] R-ATH-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis thaliana AT5G05870 R-ATH-1123470-14 AT5G05870 [cytosol] R-ATH-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis thaliana AT5G05870 R-ATH-1123470-14 AT5G05870 [cytosol] R-ATH-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis thaliana AT5G05870 R-ATH-1123470-14 AT5G05870 [cytosol] R-ATH-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis thaliana AT5G05880 R-ATH-1123470-11 AT5G05880 [cytosol] R-ATH-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis thaliana AT5G05880 R-ATH-1123470-11 AT5G05880 [cytosol] R-ATH-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis thaliana AT5G05880 R-ATH-1123470-11 AT5G05880 [cytosol] R-ATH-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis thaliana AT5G05890 R-ATH-1123470-10 AT5G05890 [cytosol] R-ATH-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis thaliana AT5G05890 R-ATH-1123470-10 AT5G05890 [cytosol] R-ATH-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis thaliana AT5G05890 R-ATH-1123470-10 AT5G05890 [cytosol] R-ATH-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis thaliana AT5G05900 R-ATH-1123470-13 AT5G05900 [cytosol] R-ATH-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis thaliana AT5G05900 R-ATH-1123470-13 AT5G05900 [cytosol] R-ATH-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis thaliana AT5G05900 R-ATH-1123470-13 AT5G05900 [cytosol] R-ATH-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis thaliana AT5G05980 R-ATH-1125928 AT5G05980 [cytosol] R-ATH-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119484 Folate polyglutamylation II none Arabidopsis thaliana AT5G05980 R-ATH-1125928 AT5G05980 [cytosol] R-ATH-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119523 Tetrahydrofolate biosynthesis II none Arabidopsis thaliana AT5G05980 R-ATH-1125928 AT5G05980 [cytosol] R-ATH-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119617 Folate polyglutamylation I none Arabidopsis thaliana AT5G06300 R-ATH-9608693 AT5G06300 [cytosol] R-ATH-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9608575 Reproductive meristem phase change none Arabidopsis thaliana AT5G06950 R-ATH-6788172-3 AT5G06950 [nucleoplasm] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT5G06960 R-ATH-6788172-2 AT5G06960 [nucleoplasm] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT5G07310 R-ATH-9930242 AT5G07310 [nucleoplasm] R-ATH-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9766881 TF network involved in salinity response none Arabidopsis thaliana AT5G07720 R-ATH-5655070 AT5G07720 [Golgi lumen] R-ATH-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5655101 Xyloglucan biosynthesis none Arabidopsis thaliana AT5G07990 R-ATH-1128178 AT5G07990 [cytosol] R-ATH-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119322 Leucodelphinidin biosynthesis none Arabidopsis thaliana AT5G07990 R-ATH-1128178 AT5G07990 [cytosol] R-ATH-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Arabidopsis thaliana AT5G07990 R-ATH-9609575 AT5G07990 [endoplasmic reticulum membrane] R-ATH-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9609573 Tricin biosynthesis none Arabidopsis thaliana AT5G08020 R-ATH-9645944 AT5G08020 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT5G08070 R-ATH-9826682 AT5G08070 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT5G08100 R-ATH-5654755 AT5G08100 [cytosol] R-ATH-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119393 Asparagine degradation I none Arabidopsis thaliana AT5G08130 R-ATH-5632199 AT5G08130 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT5G08170 R-ATH-1125533 AT5G08170 [cytosol] R-ATH-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119304 Putrescine biosynthesis II none Arabidopsis thaliana AT5G08280 R-ATH-4827041 AT5G08280 [plastid stroma] R-ATH-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-4827054 Tetrapyrrole biosynthesis I none Arabidopsis thaliana AT5G08300 R-ATH-1125237-2 AT5G08300 [mitochondrial matrix] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT5G08330 R-ATH-8933787-2 AT5G08330 [nucleoplasm] R-ATH-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8933811 Circadian rhythm none Arabidopsis thaliana AT5G08340 R-ATH-1125587 AT5G08340 [cytosol] R-ATH-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119379 Flavin biosynthesis none Arabidopsis thaliana AT5G09300 R-ATH-9611889 AT5G09300 [mitochondrial matrix] R-ATH-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119479 Valine degradation none Arabidopsis thaliana AT5G10170 R-ATH-1129964-3 AT5G10170 [cytosol] R-ATH-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119378 Myo-inositol biosynthesis none Arabidopsis thaliana AT5G10170 R-ATH-1129964-3 AT5G10170 [cytosol] R-ATH-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119434 Phytic acid biosynthesis (lipid-independent) none Arabidopsis thaliana AT5G10240 R-ATH-1122351 AT5G10240 [cytosol] R-ATH-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119354 Asparagine biosynthesis III none Arabidopsis thaliana AT5G10240 R-ATH-5633281 AT5G10240 [cytosol] R-ATH-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119495 Citrulline biosynthesis none Arabidopsis thaliana AT5G10240 R-ATH-1122351 AT5G10240 [cytosol] R-ATH-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119553 Asparagine biosynthesis none Arabidopsis thaliana AT5G10330 R-ATH-1125447 AT5G10330 [plastid stroma] R-ATH-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119509 Histidine biosynthesis I none Arabidopsis thaliana AT5G10440 R-ATH-9640777-3 AT5G10440 [nucleoplasm] R-ATH-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640760 G1 phase none Arabidopsis thaliana AT5G10440 R-ATH-9640777-3 AT5G10440 [nucleoplasm] R-ATH-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640887 G1/S transition none Arabidopsis thaliana AT5G10450 R-ATH-5632192 AT5G10450 [cytosol] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT5G10860 R-ATH-1125341 AT5G10860 [cytosol] R-ATH-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119460 Isoleucine biosynthesis from threonine none Arabidopsis thaliana AT5G10860 R-ATH-1125341 AT5G10860 [cytosol] R-ATH-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119600 Valine biosynthesis none Arabidopsis thaliana AT5G10870 R-ATH-1130344 AT5G10870 [cytosol] R-ATH-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119389 Phenylalanine biosynthesis I none Arabidopsis thaliana AT5G11110 R-ATH-1127574 AT5G11110 [cytosol] R-ATH-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119465 Sucrose biosynthesis none Arabidopsis thaliana AT5G11130 R-ATH-5655005-3 AT5G11130 [Golgi lumen] R-ATH-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5655010 Xylogalacturonan biosynthesis none Arabidopsis thaliana AT5G11230 R-ATH-9681915-3 AT5G11230 [Golgi membrane] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT5G11260 R-ATH-8933766 AT5G11260 [nucleoplasm] R-ATH-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8933811 Circadian rhythm none Arabidopsis thaliana AT5G11320 R-ATH-1126875-2 AT5G11320 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT5G11380 R-ATH-4723660 AT5G11380 [plastid stroma] R-ATH-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119464 Methylerythritol phosphate pathway none Arabidopsis thaliana AT5G11380 R-ATH-1125869 AT5G11380 [cytosol] R-ATH-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119594 Pyridoxal 5'-phosphate biosynthesis none Arabidopsis thaliana AT5G11380 R-ATH-1125869 AT5G11380 [cytosol] R-ATH-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119629 Thiamine biosynthesis none Arabidopsis thaliana AT5G11880 R-ATH-1127738 AT5G11880 [cytosol] R-ATH-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119273 Lysine biosynthesis I none Arabidopsis thaliana AT5G11880 R-ATH-1127738 AT5G11880 [cytosol] R-ATH-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119283 Lysine biosynthesis II none Arabidopsis thaliana AT5G11880 R-ATH-5606514 AT5G11880 [plastid stroma] R-ATH-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119419 Lysine biosynthesis VI none Arabidopsis thaliana AT5G12150 R-ATH-9611465-2 AT5G12150 [nucleoplasm] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT5G12150 R-ATH-9611445-2 AT5G12150 [nucleoplasm] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT5G12200 R-ATH-1127373 AT5G12200 [cytosol] R-ATH-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119297 Beta-alanine biosynthesis III none Arabidopsis thaliana AT5G13280 R-ATH-1126714-2 AT5G13280 [cytosol] R-ATH-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119273 Lysine biosynthesis I none Arabidopsis thaliana AT5G13280 R-ATH-1126714-2 AT5G13280 [cytosol] R-ATH-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119283 Lysine biosynthesis II none Arabidopsis thaliana AT5G13280 R-ATH-1126714-2 AT5G13280 [cytosol] R-ATH-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119295 Homoserine biosynthesis none Arabidopsis thaliana AT5G13280 R-ATH-5606484-2 AT5G13280 [plastid stroma] R-ATH-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119419 Lysine biosynthesis VI none Arabidopsis thaliana AT5G13330 R-ATH-9930242-2 AT5G13330 [nucleoplasm] R-ATH-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9766881 TF network involved in salinity response none Arabidopsis thaliana AT5G13700 R-ATH-9658681 AT5G13700 [plasma membrane] R-ATH-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119567 Beta-alanine biosynthesis I none Arabidopsis thaliana AT5G13710 R-ATH-1126307 AT5G13710 [cytosol] R-ATH-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119370 Sterol biosynthesis none Arabidopsis thaliana AT5G14060 R-ATH-1126714 AT5G14060 [cytosol] R-ATH-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119273 Lysine biosynthesis I none Arabidopsis thaliana AT5G14060 R-ATH-1126714 AT5G14060 [cytosol] R-ATH-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119283 Lysine biosynthesis II none Arabidopsis thaliana AT5G14060 R-ATH-1126714 AT5G14060 [cytosol] R-ATH-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119295 Homoserine biosynthesis none Arabidopsis thaliana AT5G14060 R-ATH-5606484 AT5G14060 [plastid stroma] R-ATH-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119419 Lysine biosynthesis VI none Arabidopsis thaliana AT5G14470 R-ATH-3240748-2 AT5G14470 [cytosol] R-ATH-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Arabidopsis thaliana AT5G14740 R-ATH-1130327 AT5G14740 [cytosol] R-ATH-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119586 Cyanate degradation none Arabidopsis thaliana AT5G14760 R-ATH-1122347 AT5G14760 [cytosol] R-ATH-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119384 NAD biosynthesis I (from aspartate) none Arabidopsis thaliana AT5G14800 R-ATH-5631958 AT5G14800 [cytosol] R-ATH-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119289 Arginine degradation none Arabidopsis thaliana AT5G14800 R-ATH-1122345 AT5G14800 [cytosol] R-ATH-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119318 Proline biosynthesis V (from arginine) none Arabidopsis thaliana AT5G14800 R-ATH-1122345 AT5G14800 [cytosol] R-ATH-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119631 Proline biosynthesis I none Arabidopsis thaliana AT5G14850 R-ATH-1126373 AT5G14850 [cytosol] R-ATH-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Arabidopsis thaliana AT5G15090 R-ATH-4752546 AT5G15090 [plastid stroma] R-ATH-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119498 Phylloquinone biosynthesis none Arabidopsis thaliana AT5G15100 R-ATH-8858063 AT5G15100 [plasma membrane] R-ATH-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8858053 Polar auxin transport none Arabidopsis thaliana AT5G15180 R-ATH-9916124-2 OsPRX95 [extracellular region] R-ATH-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119403 Removal of superoxide radicals none Arabidopsis thaliana AT5G15180 R-ATH-9916124-2 OsPRX95 [extracellular region] R-ATH-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9607185 Generation of superoxide radicals none Arabidopsis thaliana AT5G15490 R-ATH-9681886-5 AT5G15490 [cytosol] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT5G15650 R-ATH-9681910-2 AT5G15650 [Golgi membrane] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT5G15770 R-ATH-2960790 AT5G15770 [cytosol] R-ATH-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119386 UDP-N-acetylgalactosamine biosynthesis none Arabidopsis thaliana AT5G15770 R-ATH-2960790 AT5G15770 [cytosol] R-ATH-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030654 Primary root development none Arabidopsis thaliana AT5G15840 R-ATH-8934168-2 AT5G15840 [nucleoplasm] R-ATH-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934036 Long day regulated expression of florigens none Arabidopsis thaliana AT5G15840 R-ATH-8934168-2 AT5G15840 [nucleoplasm] R-ATH-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934108 Short day regulated expression of florigens none Arabidopsis thaliana AT5G15840 R-ATH-9920270-2 AT5G15840 [nucleoplasm] R-ATH-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934108 Short day regulated expression of florigens none Arabidopsis thaliana AT5G15840 R-ATH-8934168-2 AT5G15840 [nucleoplasm] R-ATH-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9928946 Drought escape (DE) via ABA-independent pathway none Arabidopsis thaliana AT5G15850 R-ATH-8934168-3 AT5G15850 [nucleoplasm] R-ATH-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934036 Long day regulated expression of florigens none Arabidopsis thaliana AT5G15850 R-ATH-8934168-3 AT5G15850 [nucleoplasm] R-ATH-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934108 Short day regulated expression of florigens none Arabidopsis thaliana AT5G15850 R-ATH-9920270-3 AT5G15850 [nucleoplasm] R-ATH-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934108 Short day regulated expression of florigens none Arabidopsis thaliana AT5G15850 R-ATH-8934168-3 AT5G15850 [nucleoplasm] R-ATH-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9928946 Drought escape (DE) via ABA-independent pathway none Arabidopsis thaliana AT5G16010 R-ATH-1127467 AT5G16010 [cytosol] R-ATH-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119456 Brassinosteroid biosynthesis II none Arabidopsis thaliana AT5G16050 R-ATH-5632238-3 AT5G16050 [cytosol] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT5G16050 R-ATH-5632238-3 AT5G16050 [cytosol] R-ATH-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934257 Transition from vegetative to reproductive shoot apical meristem none Arabidopsis thaliana AT5G16050 R-ATH-9927894-3 AT5G16050 [nucleoplasm] R-ATH-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934257 Transition from vegetative to reproductive shoot apical meristem none Arabidopsis thaliana AT5G16050 R-ATH-5632238-3 AT5G16050 [cytosol] R-ATH-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9609102 Flower development none Arabidopsis thaliana AT5G16050 R-ATH-5632238-3 AT5G16050 [cytosol] R-ATH-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9928831 Severe drought none Arabidopsis thaliana AT5G16050 R-ATH-9927894-3 AT5G16050 [nucleoplasm] R-ATH-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9928831 Severe drought none Arabidopsis thaliana AT5G16290 R-ATH-1127455 AT5G16290 [cytosol] R-ATH-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119460 Isoleucine biosynthesis from threonine none Arabidopsis thaliana AT5G16290 R-ATH-1127455 AT5G16290 [cytosol] R-ATH-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119600 Valine biosynthesis none Arabidopsis thaliana AT5G16440 R-ATH-1129816-2 AT5G16440 [plastid stroma] R-ATH-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119367 Polyisoprenoid biosynthesis none Arabidopsis thaliana AT5G16440 R-ATH-1129816-2 AT5G16440 [plastid stroma] R-ATH-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119615 Mevalonate pathway none Arabidopsis thaliana AT5G16510 R-ATH-9681905 AT5G16510 [Golgi membrane] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT5G16530 R-ATH-8858112 AT5G16530 [plasma membrane] R-ATH-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8858053 Polar auxin transport none Arabidopsis thaliana AT5G16570 R-ATH-1127192-2 AT5G16570 [cytosol] R-ATH-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119291 Nitrate assimilation none Arabidopsis thaliana AT5G16570 R-ATH-1127192-2 AT5G16570 [cytosol] R-ATH-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119293 Glutamine biosynthesis I none Arabidopsis thaliana AT5G16570 R-ATH-1127192-2 AT5G16570 [cytosol] R-ATH-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119443 Ammonia assimilation cycle none Arabidopsis thaliana AT5G16690 R-ATH-9640716 AT5G16690 [nucleoplasm] R-ATH-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030654 Primary root development none Arabidopsis thaliana AT5G16690 R-ATH-9640716 AT5G16690 [nucleoplasm] R-ATH-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640882 Assembly of pre-replication complex none Arabidopsis thaliana AT5G16690 R-ATH-9640716 AT5G16690 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT5G16760 R-ATH-9638999 AT5G16760 [cytosol] R-ATH-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119434 Phytic acid biosynthesis (lipid-independent) none Arabidopsis thaliana AT5G17230 R-ATH-1124861 AT5G17230 [plastid stroma] R-ATH-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119449 Carotenoid biosynthesis none Arabidopsis thaliana AT5G17530 R-ATH-9918201 AT5G17530 [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT5G17810 R-ATH-9924413-2 WOX6 [nucleoplasm] R-ATH-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9924451 Shoot (tiller) formation and regulation of tiller angle none Arabidopsis thaliana AT5G17920 R-ATH-1125151-3 AT5G17920 [cytosol] R-ATH-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119400 Methionine biosynthesis II none Arabidopsis thaliana AT5G17920 R-ATH-1125151-3 AT5G17920 [cytosol] R-ATH-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119501 S-adenosyl-L-methionine cycle none Arabidopsis thaliana AT5G17990 R-ATH-1126238 AT5G17990 [chloroplast] R-ATH-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119494 Tryptophan biosynthesis none Arabidopsis thaliana AT5G18070 R-ATH-1123046 AT5G18070 [cytosol] R-ATH-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119386 UDP-N-acetylgalactosamine biosynthesis none Arabidopsis thaliana AT5G19010 R-ATH-9930255 MPK15 [nucleoplasm] R-ATH-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9766881 TF network involved in salinity response none Arabidopsis thaliana AT5G19200 R-ATH-9025500-2 AT5G19200 [endoplasmic reticulum membrane] R-ATH-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119325 Sphingolipid metabolism none Arabidopsis thaliana AT5G19220 R-ATH-1122398 AT5G19220 [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT5G19390 R-ATH-9611465 AT5G19390 [nucleoplasm] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT5G19390 R-ATH-9611445 AT5G19390 [nucleoplasm] R-ATH-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis thaliana AT5G19550 R-ATH-1125734 AT5G19550 [cytosol] R-ATH-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119281 Aspartate biosynthesis I none Arabidopsis thaliana AT5G19550 R-ATH-5632000 AT5G19550 [plastid stroma] R-ATH-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119553 Asparagine biosynthesis none Arabidopsis thaliana AT5G20260 R-ATH-5655005-2 AT5G20260 [Golgi lumen] R-ATH-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5655010 Xylogalacturonan biosynthesis none Arabidopsis thaliana AT5G20280 R-ATH-1127574-2 AT5G20280 [cytosol] R-ATH-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119465 Sucrose biosynthesis none Arabidopsis thaliana AT5G20730 R-ATH-5608125-2 AT5G20730 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT5G20830 R-ATH-1129561-2 AT5G20830 [cytosol] R-ATH-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119452 Galactose degradation II none Arabidopsis thaliana AT5G20830 R-ATH-1129561-2 AT5G20830 [cytosol] R-ATH-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119465 Sucrose biosynthesis none Arabidopsis thaliana AT5G20850 R-ATH-6788201 AT5G20850 [nucleoplasm] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT5G20960 R-ATH-1250418-2 AT5G20960 [cytosol] R-ATH-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119374 Abscisic acid biosynthesis none Arabidopsis thaliana AT5G20960 R-ATH-1129637-3 AT5G20960 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT5G20980 R-ATH-1125151-2 AT5G20980 [cytosol] R-ATH-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119400 Methionine biosynthesis II none Arabidopsis thaliana AT5G20980 R-ATH-1125151-2 AT5G20980 [cytosol] R-ATH-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119501 S-adenosyl-L-methionine cycle none Arabidopsis thaliana AT5G21060 R-ATH-1126387 AT5G21060 [cytosol] R-ATH-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119295 Homoserine biosynthesis none Arabidopsis thaliana AT5G22010 R-ATH-9675803 AT5G22010 [nucleoplasm] R-ATH-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675815 Leading strand synthesis none Arabidopsis thaliana AT5G22020 R-ATH-1126604 AT5G22020 [cytosol] R-ATH-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119438 Secologanin and strictosidine biosynthesis none Arabidopsis thaliana AT5G22110 R-ATH-9645866 AT5G22110 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT5G22110 R-ATH-9645866 AT5G22110 [nucleoplasm] R-ATH-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675824 DNA replication Initiation none Arabidopsis thaliana AT5G22130 R-ATH-1130348 AT5G22130 [cytosol] R-ATH-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Arabidopsis thaliana AT5G22220 R-ATH-9640739 AT5G22220 [nucleoplasm] R-ATH-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640887 G1/S transition none Arabidopsis thaliana AT5G22300 R-ATH-1127161-4 AT5G22300 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT5G22630 R-ATH-1129481-2 AT5G22630 [cytosol] R-ATH-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119389 Phenylalanine biosynthesis I none Arabidopsis thaliana AT5G22920 R-ATH-9826654 AT5G22920 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT5G23010 R-ATH-1127173-4 AT5G23010 [cytosol] R-ATH-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119540 Leucine biosynthesis none Arabidopsis thaliana AT5G23020 R-ATH-1127173-2 AT5G23020 [cytosol] R-ATH-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119540 Leucine biosynthesis none Arabidopsis thaliana AT5G23250 R-ATH-1125237 AT5G23250 [mitochondrial matrix] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT5G23280 R-ATH-8933787 AT5G23280 [nucleoplasm] R-ATH-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8933811 Circadian rhythm none Arabidopsis thaliana AT5G23310 R-ATH-1129355 AT5G23310 [plastid] R-ATH-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119403 Removal of superoxide radicals none Arabidopsis thaliana AT5G23330 R-ATH-1125587-2 AT5G23330 [cytosol] R-ATH-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119379 Flavin biosynthesis none Arabidopsis thaliana AT5G23670 R-ATH-9025471-2 AT5G23670 [endoplasmic reticulum membrane] R-ATH-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119325 Sphingolipid metabolism none Arabidopsis thaliana AT5G23670 R-ATH-1127934-2 AT5G23670 [cytosol] R-ATH-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119610 Biotin biosynthesis II none Arabidopsis thaliana AT5G24300 R-ATH-1128586 AT5G24300 [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT5G24380 R-ATH-9025699-3 AT5G24380 [plasma membrane] R-ATH-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8858053 Polar auxin transport none Arabidopsis thaliana AT5G24380 R-ATH-9025699-3 AT5G24380 [plasma membrane] R-ATH-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9025727 Iron uptake and transport in root vascular system none Arabidopsis thaliana AT5G24470 R-ATH-8933784 AT5G24470 [nucleoplasm] R-ATH-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8933811 Circadian rhythm none Arabidopsis thaliana AT5G24900 R-ATH-9924543 CYP714D1/EUI1 [endoplasmic reticulum membrane] R-ATH-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Arabidopsis thaliana AT5G24910 R-ATH-9924543-2 CYP714D1/EUI1 [endoplasmic reticulum membrane] R-ATH-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Arabidopsis thaliana AT5G25400 R-ATH-9681915 AT5G25400 [Golgi membrane] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT5G25620 R-ATH-1124809-2 AT5G25620 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT5G25900 R-ATH-2731026 AT5G25900 [endoplasmic reticulum membrane] R-ATH-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119557 GA12 biosynthesis none Arabidopsis thaliana AT5G26600 R-ATH-9612399-2 AT5G26600 [peroxisomal matrix] R-ATH-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119612 Cysteine degradation none Arabidopsis thaliana AT5G26600 R-ATH-9612380-2 AT5G26600 [cytosol] R-ATH-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119612 Cysteine degradation none Arabidopsis thaliana AT5G26680 R-ATH-9675857 AT5G26680 [nucleoplasm] R-ATH-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675782 Maturation none Arabidopsis thaliana AT5G27030 R-ATH-5632301 AT5G27030 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT5G27030 R-ATH-5632301 AT5G27030 [nucleoplasm] R-ATH-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5654828 Strigolactone signaling none Arabidopsis thaliana AT5G27030 R-ATH-5632301 AT5G27030 [nucleoplasm] R-ATH-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6787011 Jasmonic acid signaling none Arabidopsis thaliana AT5G27320 R-ATH-5679398-3 AT5G27320 [cytosol] R-ATH-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5679411 Gibberellin signaling none Arabidopsis thaliana AT5G27380 R-ATH-1129924 AT5G27380 [cytosol] R-ATH-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119342 Gamma-glutamyl cycle none Arabidopsis thaliana AT5G27380 R-ATH-1129924 AT5G27380 [cytosol] R-ATH-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119483 Glutathione biosynthesis none Arabidopsis thaliana AT5G27450 R-ATH-1127597 AT5G27450 [cytosol] R-ATH-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119615 Mevalonate pathway none Arabidopsis thaliana AT5G27620 R-ATH-9640783 AT5G27620 [nucleoplasm] R-ATH-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640760 G1 phase none Arabidopsis thaliana AT5G27740 R-ATH-9675838 AT5G27740 [nucleoplasm] R-ATH-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675815 Leading strand synthesis none Arabidopsis thaliana AT5G28640 R-ATH-9035785 AT5G28640 [nucleoplasm] R-ATH-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9608575 Reproductive meristem phase change none Arabidopsis thaliana AT5G28840 R-ATH-9682506 AT5G28840 [cytosol] R-ATH-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119410 Ascorbate biosynthesis none Arabidopsis thaliana AT5G28850 R-ATH-5632268-5 AT5G28850 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT5G28900 R-ATH-5632268-3 AT5G28900 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT5G33290 R-ATH-5655005-4 AT5G33290 [Golgi lumen] R-ATH-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5655010 Xylogalacturonan biosynthesis none Arabidopsis thaliana AT5G34780 R-ATH-9611889-2 AT5G34780 [mitochondrial matrix] R-ATH-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119479 Valine degradation none Arabidopsis thaliana AT5G35630 R-ATH-1129629 AT5G35630 [plastid stroma] R-ATH-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119293 Glutamine biosynthesis I none Arabidopsis thaliana AT5G35630 R-ATH-1129629 AT5G35630 [plastid stroma] R-ATH-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119443 Ammonia assimilation cycle none Arabidopsis thaliana AT5G36160 R-ATH-1129547-3 AT5G36160 [cytosol] R-ATH-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119389 Phenylalanine biosynthesis I none Arabidopsis thaliana AT5G36160 R-ATH-1129547-3 AT5G36160 [cytosol] R-ATH-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119400 Methionine biosynthesis II none Arabidopsis thaliana AT5G36160 R-ATH-1129547-3 AT5G36160 [cytosol] R-ATH-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119506 tyrosine degradation I none Arabidopsis thaliana AT5G37020 R-ATH-5608169 AT5G37020 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT5G37180 R-ATH-1128815 AT5G37180 [cytosol] R-ATH-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119452 Galactose degradation II none Arabidopsis thaliana AT5G37180 R-ATH-1128815 AT5G37180 [cytosol] R-ATH-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119465 Sucrose biosynthesis none Arabidopsis thaliana AT5G37600 R-ATH-1127192-3 AT5G37600 [cytosol] R-ATH-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119291 Nitrate assimilation none Arabidopsis thaliana AT5G37600 R-ATH-1127192-3 AT5G37600 [cytosol] R-ATH-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119293 Glutamine biosynthesis I none Arabidopsis thaliana AT5G37600 R-ATH-1127192-3 AT5G37600 [cytosol] R-ATH-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119443 Ammonia assimilation cycle none Arabidopsis thaliana AT5G37830 R-ATH-3315084 AT5G37830 [cytosol] R-ATH-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119342 Gamma-glutamyl cycle none Arabidopsis thaliana AT5G37850 R-ATH-1125540 AT5G37850 [cytosol] R-ATH-1119303 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119303 Pyridoxamine anabolism none Arabidopsis thaliana AT5G37850 R-ATH-1125540 AT5G37850 [cytosol] R-ATH-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119534 Pyridoxal 5'-phosphate salvage pathway none Arabidopsis thaliana AT5G37950 R-ATH-1128131 AT5G37950 [cytosol] R-ATH-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis thaliana AT5G38010 R-ATH-1123470-8 AT5G38010 [cytosol] R-ATH-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis thaliana AT5G38010 R-ATH-1123470-8 AT5G38010 [cytosol] R-ATH-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis thaliana AT5G38010 R-ATH-1123470-8 AT5G38010 [cytosol] R-ATH-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis thaliana AT5G38040 R-ATH-1123470-5 AT5G38040 [cytosol] R-ATH-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis thaliana AT5G38040 R-ATH-1123470-5 AT5G38040 [cytosol] R-ATH-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis thaliana AT5G38040 R-ATH-1123470-5 AT5G38040 [cytosol] R-ATH-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis thaliana AT5G38410 R-ATH-8987531-3 AT5G38410 [chloroplast] R-ATH-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119312 Photorespiration none Arabidopsis thaliana AT5G38410 R-ATH-1125951-3 AT5G38410 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT5G38420 R-ATH-8987531-2 AT5G38420 [chloroplast] R-ATH-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119312 Photorespiration none Arabidopsis thaliana AT5G38420 R-ATH-1125951-2 AT5G38420 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT5G38430 R-ATH-8987531 AT5G38430 [chloroplast] R-ATH-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119312 Photorespiration none Arabidopsis thaliana AT5G38430 R-ATH-1125951 AT5G38430 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT5G38480 R-ATH-5632238-2 AT5G38480 [cytosol] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT5G38480 R-ATH-5632238-2 AT5G38480 [cytosol] R-ATH-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934257 Transition from vegetative to reproductive shoot apical meristem none Arabidopsis thaliana AT5G38480 R-ATH-9927894-2 AT5G38480 [nucleoplasm] R-ATH-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934257 Transition from vegetative to reproductive shoot apical meristem none Arabidopsis thaliana AT5G38480 R-ATH-5632238-2 AT5G38480 [cytosol] R-ATH-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9609102 Flower development none Arabidopsis thaliana AT5G38480 R-ATH-5632238-2 AT5G38480 [cytosol] R-ATH-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9928831 Severe drought none Arabidopsis thaliana AT5G38480 R-ATH-9927894-2 AT5G38480 [nucleoplasm] R-ATH-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9928831 Severe drought none Arabidopsis thaliana AT5G38530 R-ATH-1126400 AT5G38530 [chloroplast] R-ATH-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119494 Tryptophan biosynthesis none Arabidopsis thaliana AT5G39040 R-ATH-9639171 AT5G39040 [plant-type vacuole membrane] R-ATH-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639136 Response to Aluminum stress none Arabidopsis thaliana AT5G39320 R-ATH-9681886 AT5G39320 [cytosol] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT5G39610 R-ATH-9766876-2 AT5G39610 [nucleoplasm] R-ATH-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9766881 TF network involved in salinity response none Arabidopsis thaliana AT5G39610 R-ATH-9766876-2 AT5G39610 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT5G40280 R-ATH-1127292 AT5G40280 [plastid stroma] R-ATH-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Arabidopsis thaliana AT5G40390 R-ATH-1127752 AT5G40390 [cytosol] R-ATH-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119417 Stachyose biosynthesis none Arabidopsis thaliana AT5G40610 R-ATH-9025351 AT5G40610 [cytosol] R-ATH-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119402 Phospholipid biosynthesis I none Arabidopsis thaliana AT5G40650 R-ATH-1122601-2 AT5G40650 [mitochondrial inner membrane] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT5G40870 R-ATH-1124138 AT5G40870 [cytosol] R-ATH-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119394 Pantothenate and coenzyme A biosynthesis III none Arabidopsis thaliana AT5G42740 R-ATH-1124742 AT5G42740 [cytosol] R-ATH-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119410 Ascorbate biosynthesis none Arabidopsis thaliana AT5G42740 R-ATH-1124742 AT5G42740 [cytosol] R-ATH-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119570 Cytosolic glycolysis none Arabidopsis thaliana AT5G43060 R-ATH-8986682 AT5G43060 [extracellular region] R-ATH-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8986768 Anther and pollen development none Arabidopsis thaliana AT5G43100 R-ATH-1123819 AT5G43100 [plastid stroma] R-ATH-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119464 Methylerythritol phosphate pathway none Arabidopsis thaliana AT5G43600 R-ATH-9658563 AT5G43600 [endoplasmic reticulum lumen] R-ATH-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119502 Allantoin degradation none Arabidopsis thaliana AT5G43780 R-ATH-1128257 AT5G43780 [plastid stroma] R-ATH-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119529 Sulfate activation for sulfonation none Arabidopsis thaliana AT5G43840 R-ATH-9924379-2 HSFA2D [nucleoplasm] R-ATH-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9924451 Shoot (tiller) formation and regulation of tiller angle none Arabidopsis thaliana AT5G43940 R-ATH-1128327 AT5G43940 [cytosol] R-ATH-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119267 Phenylalanine degradation III none Arabidopsis thaliana AT5G44030 R-ATH-1128528 AT5G44030 [plasma membrane] R-ATH-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119314 Cellulose biosynthesis none Arabidopsis thaliana AT5G44080 R-ATH-9928771-2 AT5G44080 [nucleoplasm] R-ATH-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9928831 Severe drought none Arabidopsis thaliana AT5G44090 R-ATH-5632268-2 AT5G44090 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT5G44480 R-ATH-1125489 AT5G44480 [Golgi membrane] R-ATH-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis thaliana AT5G44480 R-ATH-1127743 AT5G44480 [cytosol] R-ATH-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis thaliana AT5G44480 R-ATH-1125489 AT5G44480 [Golgi membrane] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT5G44480 R-ATH-1125489 AT5G44480 [Golgi membrane] R-ATH-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis thaliana AT5G44480 R-ATH-1127743 AT5G44480 [cytosol] R-ATH-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis thaliana AT5G44520 R-ATH-1124484 AT5G44520 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT5G44635 R-ATH-9640786 AT5G44635 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT5G44635 R-ATH-9640786 AT5G44635 [nucleoplasm] R-ATH-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675824 DNA replication Initiation none Arabidopsis thaliana AT5G44800 R-ATH-9675357 AT5G44800 [nucleoplasm] R-ATH-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030680 Crown root development none Arabidopsis thaliana AT5G45110 R-ATH-6788026 AT5G45110 [cytosol] R-ATH-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6788019 Salicylic acid signaling none Arabidopsis thaliana AT5G45130 R-ATH-9626337-2 AT5G45130 [Golgi-associated vesicle] R-ATH-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9626305 Regulatory network of nutrient accumulation none Arabidopsis thaliana AT5G45340 R-ATH-1128857 AT5G45340 [cytosol] R-ATH-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119609 Phaseic acid biosynthesis none Arabidopsis thaliana AT5G46180 R-ATH-5631953 AT5G46180 [mitochondrial matrix] R-ATH-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119289 Arginine degradation none Arabidopsis thaliana AT5G46180 R-ATH-1124214 AT5G46180 [cytosol] R-ATH-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119318 Proline biosynthesis V (from arginine) none Arabidopsis thaliana AT5G46180 R-ATH-1124214 AT5G46180 [cytosol] R-ATH-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119610 Biotin biosynthesis II none Arabidopsis thaliana AT5G46240 R-ATH-4415060-2 AT5G46240 [plasma membrane] R-ATH-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis thaliana AT5G46240 R-ATH-4415065-2 phospho-AT5G46240 [plasma membrane] R-ATH-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis thaliana AT5G46280 R-ATH-9640767 AT5G46280 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT5G46280 R-ATH-9640767 AT5G46280 [nucleoplasm] R-ATH-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675824 DNA replication Initiation none Arabidopsis thaliana AT5G46570 R-ATH-5632319 phospho-AT5G46570 [plasma membrane] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT5G46760 R-ATH-6787119-4 AT5G46760 [nucleoplasm] R-ATH-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6787011 Jasmonic acid signaling none Arabidopsis thaliana AT5G46830 R-ATH-6787119-2 AT5G46830 [nucleoplasm] R-ATH-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6787011 Jasmonic acid signaling none Arabidopsis thaliana AT5G47720 R-ATH-1126998 AT5G47720 [cytosol] R-ATH-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119615 Mevalonate pathway none Arabidopsis thaliana AT5G47760 R-ATH-1127491 AT5G47760 [chloroplast] R-ATH-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119312 Photorespiration none Arabidopsis thaliana AT5G47770 R-ATH-1130006 AT5G47770 [plastid stroma] R-ATH-1119569 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119569 Kievitone biosynthesis none Arabidopsis thaliana AT5G48220 R-ATH-1123161 AT5G48220 [chloroplast] R-ATH-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119494 Tryptophan biosynthesis none Arabidopsis thaliana AT5G48230 R-ATH-1126998-2 AT5G48230 [cytosol] R-ATH-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119615 Mevalonate pathway none Arabidopsis thaliana AT5G48300 R-ATH-1127443 AT5G48300 [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT5G48300 R-ATH-1122818 AT5G48300 [cytosol] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT5G48360 R-ATH-9639789-2 AT5G48360 [plasma membrane] R-ATH-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639861 Development of root hair none Arabidopsis thaliana AT5G48820 R-ATH-9640789-2 AT5G48820 [nucleoplasm] R-ATH-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640760 G1 phase none Arabidopsis thaliana AT5G48840 R-ATH-1126091 AT5G48840 [cytosol] R-ATH-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119394 Pantothenate and coenzyme A biosynthesis III none Arabidopsis thaliana AT5G48840 R-ATH-1126091 AT5G48840 [cytosol] R-ATH-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119496 Pantothenate biosynthesis I none Arabidopsis thaliana AT5G48840 R-ATH-1126091 AT5G48840 [cytosol] R-ATH-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119544 Pantothenate biosynthesis II none Arabidopsis thaliana AT5G48840 R-ATH-1126091 AT5G48840 [cytosol] R-ATH-1119568 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119568 Pantothenate biosynthesis III none Arabidopsis thaliana AT5G48930 R-ATH-1128431 AT5G48930 [cytosol] R-ATH-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119316 Phenylpropanoid biosynthesis none Arabidopsis thaliana AT5G49010 R-ATH-9675790 AT5G49010 [nucleoplasm] R-ATH-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675824 DNA replication Initiation none Arabidopsis thaliana AT5G49650 R-ATH-1130302 AT5G49650 [cytosol] R-ATH-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119451 Xylose degradation none Arabidopsis thaliana AT5G49810 R-ATH-1124935 AT5G49810 [cytosol] R-ATH-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119349 S-methylmethionine cycle none Arabidopsis thaliana AT5G49970 R-ATH-1124490 AT5G49970 [cytosol] R-ATH-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119534 Pyridoxal 5'-phosphate salvage pathway none Arabidopsis thaliana AT5G49970 R-ATH-1124490 AT5G49970 [cytosol] R-ATH-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119594 Pyridoxal 5'-phosphate biosynthesis none Arabidopsis thaliana AT5G49980 R-ATH-5608140 AT5G49980 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT5G50210 R-ATH-1127151 AT5G50210 [cytosol] R-ATH-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119384 NAD biosynthesis I (from aspartate) none Arabidopsis thaliana AT5G50950 R-ATH-1126830 AT5G50950 [mitochondrial matrix] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT5G51100 R-ATH-1125399-2 AT5G51100 [plastid] R-ATH-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119403 Removal of superoxide radicals none Arabidopsis thaliana AT5G51230 R-ATH-9608930 AT5G51230 [nucleoplasm] R-ATH-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934036 Long day regulated expression of florigens none Arabidopsis thaliana AT5G51290 R-ATH-9025447 AT5G51290 [cytosol] R-ATH-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119325 Sphingolipid metabolism none Arabidopsis thaliana AT5G51460 R-ATH-1125569 AT5G51460 [cytosol] R-ATH-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119516 Trehalose biosynthesis I none Arabidopsis thaliana AT5G51820 R-ATH-1124757 AT5G51820 [cytosol] R-ATH-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119465 Sucrose biosynthesis none Arabidopsis thaliana AT5G51820 R-ATH-1124757 AT5G51820 [cytosol] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT5G51990 R-ATH-8879029 DREB1G [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT5G51990 R-ATH-8879071 CBF1 homolog [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT5G51990 R-ATH-8879085 AT5G51990 [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT5G52020 R-ATH-9826696 AT5G52020 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT5G52100 R-ATH-1129478 AT5G52100 [cytosol] R-ATH-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119273 Lysine biosynthesis I none Arabidopsis thaliana AT5G52100 R-ATH-1129478 AT5G52100 [cytosol] R-ATH-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119283 Lysine biosynthesis II none Arabidopsis thaliana AT5G52100 R-ATH-5606483 AT5G52100 [plastid stroma] R-ATH-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119419 Lysine biosynthesis VI none Arabidopsis thaliana AT5G52560 R-ATH-3240749 AT5G52560 [cytosol] R-ATH-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Arabidopsis thaliana AT5G52560 R-ATH-9681918 AT5G52560 [cytosol] R-ATH-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis thaliana AT5G53120 R-ATH-1123059 AT5G53120 [cytosol] R-ATH-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119317 Spermine biosynthesis none Arabidopsis thaliana AT5G53120 R-ATH-1123059 AT5G53120 [cytosol] R-ATH-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119343 Spermidine biosynthesis none Arabidopsis thaliana AT5G53460 R-ATH-1129859 AT5G53460 [chloroplast stroma] R-ATH-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119443 Ammonia assimilation cycle none Arabidopsis thaliana AT5G53460 R-ATH-5606382 AT5G53460 [plastid stroma] R-ATH-1119535 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119535 Glutamate biosynthesis IV none Arabidopsis thaliana AT5G53550 R-ATH-9025699 AT5G53550 [plasma membrane] R-ATH-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8858053 Polar auxin transport none Arabidopsis thaliana AT5G53550 R-ATH-9025699 AT5G53550 [plasma membrane] R-ATH-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9025727 Iron uptake and transport in root vascular system none Arabidopsis thaliana AT5G53970 R-ATH-1129547-6 AT5G53970 [cytosol] R-ATH-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119389 Phenylalanine biosynthesis I none Arabidopsis thaliana AT5G53970 R-ATH-1129547-6 AT5G53970 [cytosol] R-ATH-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119400 Methionine biosynthesis II none Arabidopsis thaliana AT5G53970 R-ATH-1129547-6 AT5G53970 [cytosol] R-ATH-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119506 tyrosine degradation I none Arabidopsis thaliana AT5G54080 R-ATH-1127734 AT5G54080 [cytosol] R-ATH-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119506 tyrosine degradation I none Arabidopsis thaliana AT5G54140 R-ATH-2685732 AT5G54140 [cytosol] R-ATH-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119580 IAA biosynthesis II none Arabidopsis thaliana AT5G54800 R-ATH-9918175 AT5G54800 [amyloplast] R-ATH-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119477 Starch biosynthesis none Arabidopsis thaliana AT5G54810 R-ATH-1129867-2 AT5G54810 [chloroplast] R-ATH-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119494 Tryptophan biosynthesis none Arabidopsis thaliana AT5G54960 R-ATH-9025294-2 AT5G54960 [cytosol] R-ATH-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119267 Phenylalanine degradation III none Arabidopsis thaliana AT5G54960 R-ATH-1124944 AT5G54960 [plastid stroma] R-ATH-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119460 Isoleucine biosynthesis from threonine none Arabidopsis thaliana AT5G54960 R-ATH-1127774 AT5G54960 [cytosol] R-ATH-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119460 Isoleucine biosynthesis from threonine none Arabidopsis thaliana AT5G54960 R-ATH-1124944 AT5G54960 [plastid stroma] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT5G54960 R-ATH-1127774 AT5G54960 [cytosol] R-ATH-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119486 IAA biosynthesis I none Arabidopsis thaliana AT5G54960 R-ATH-1124944 AT5G54960 [plastid stroma] R-ATH-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119502 Allantoin degradation none Arabidopsis thaliana AT5G54960 R-ATH-1124944 AT5G54960 [plastid stroma] R-ATH-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119600 Valine biosynthesis none Arabidopsis thaliana AT5G54960 R-ATH-1127774 AT5G54960 [cytosol] R-ATH-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119600 Valine biosynthesis none Arabidopsis thaliana AT5G55070 R-ATH-1128606 AT5G55070 [mitochondrial matrix] R-ATH-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119365 Lysine degradation II none Arabidopsis thaliana AT5G55070 R-ATH-1173244 AT5G55070 [mitochondrial matrix] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT5G55260 R-ATH-5632251 AT5G55260 [nucleoplasm] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT5G55300 R-ATH-9675426-2 AT5G55300 [nucleoplasm] R-ATH-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030654 Primary root development none Arabidopsis thaliana AT5G55310 R-ATH-9675426 AT5G55310 [nucleoplasm] R-ATH-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030654 Primary root development none Arabidopsis thaliana AT5G56080 R-ATH-9025712-4 AT5G56080 [cytosol] R-ATH-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9025754 Mugineic acid biosynthesis none Arabidopsis thaliana AT5G56640 R-ATH-1127523 AT5G56640 [cytosol] R-ATH-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Arabidopsis thaliana AT5G56650 R-ATH-2685730 AT5G56650 [cytosol] R-ATH-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119580 IAA biosynthesis II none Arabidopsis thaliana AT5G56660 R-ATH-2685730-3 AT5G56660 [cytosol] R-ATH-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119580 IAA biosynthesis II none Arabidopsis thaliana AT5G56760 R-ATH-1128798 AT5G56760 [cytosol] R-ATH-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119331 Cysteine biosynthesis I none Arabidopsis thaliana AT5G56840 R-ATH-9826609 AT5G56840 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT5G57090 R-ATH-8858085 AT5G57090 [plasma membrane] R-ATH-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8858053 Polar auxin transport none Arabidopsis thaliana AT5G57090 R-ATH-8858085 AT5G57090 [plasma membrane] R-ATH-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9924494 Gravity sensing and statolith sedimentation none Arabidopsis thaliana AT5G57090 R-ATH-9928298 PIN2 [endosome] R-ATH-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9924494 Gravity sensing and statolith sedimentation none Arabidopsis thaliana AT5G57190 R-ATH-1126488-2 AT5G57190 [mitochondrial inner membrane] R-ATH-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119402 Phospholipid biosynthesis I none Arabidopsis thaliana AT5G57380 R-ATH-9920292 AT5G57380 [nucleoplasm] R-ATH-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8934108 Short day regulated expression of florigens none Arabidopsis thaliana AT5G57590 R-ATH-1124048 AT5G57590 [cytosol] R-ATH-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119610 Biotin biosynthesis II none Arabidopsis thaliana AT5G57655 R-ATH-1123477 AT5G57655 [cytosol] R-ATH-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119451 Xylose degradation none Arabidopsis thaliana AT5G57890 R-ATH-1128637-4 AT5G57890 [chloroplast] R-ATH-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119494 Tryptophan biosynthesis none Arabidopsis thaliana AT5G58220 R-ATH-9025230 AT5G58220 [peroxisomal matrix] R-ATH-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119407 Ureide biosynthesis none Arabidopsis thaliana AT5G59220 R-ATH-4415078 AT5G59220 [cytosol] R-ATH-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis thaliana AT5G59290 R-ATH-1126799-2 AT5G59290 [cytosol] R-ATH-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis thaliana AT5G59290 R-ATH-1126799-2 AT5G59290 [cytosol] R-ATH-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119563 UDP-D-xylose biosynthesis none Arabidopsis thaliana AT5G59290 R-ATH-1126799-2 AT5G59290 [cytosol] R-ATH-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis thaliana AT5G59390 R-ATH-9684723-3 AT5G59390 [cytosol] R-ATH-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9609102 Flower development none Arabidopsis thaliana AT5G59580 R-ATH-1123470-12 AT5G59580 [cytosol] R-ATH-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis thaliana AT5G59580 R-ATH-1123470-12 AT5G59580 [cytosol] R-ATH-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis thaliana AT5G59580 R-ATH-1123470-12 AT5G59580 [cytosol] R-ATH-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis thaliana AT5G59590 R-ATH-1123470-16 AT5G59590 [cytosol] R-ATH-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis thaliana AT5G59590 R-ATH-1123470-16 AT5G59590 [cytosol] R-ATH-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis thaliana AT5G59590 R-ATH-1123470-16 AT5G59590 [cytosol] R-ATH-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis thaliana AT5G59750 R-ATH-1126172 AT5G59750 [cytosol] R-ATH-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119379 Flavin biosynthesis none Arabidopsis thaliana AT5G59780 R-ATH-9826691 AT5G59780 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT5G60010 R-ATH-9639874 AT5G60010 [plasma membrane] R-ATH-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639861 Development of root hair none Arabidopsis thaliana AT5G60500 R-ATH-1125910 AT5G60500 [plastid stroma] R-ATH-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119367 Polyisoprenoid biosynthesis none Arabidopsis thaliana AT5G60510 R-ATH-1125910-3 AT5G60510 [plastid stroma] R-ATH-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119367 Polyisoprenoid biosynthesis none Arabidopsis thaliana AT5G60570 R-ATH-8879040 AT5G60570 [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT5G60600 R-ATH-1124778 AT5G60600 [plastid stroma] R-ATH-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119464 Methylerythritol phosphate pathway none Arabidopsis thaliana AT5G60620 R-ATH-1125494 AT5G60620 [endoplasmic reticulum membrane] R-ATH-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119402 Phospholipid biosynthesis I none Arabidopsis thaliana AT5G60660 R-ATH-9618056-3 AT5G60660 [plasma membrane] R-ATH-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9618218 Arsenic uptake and detoxification none Arabidopsis thaliana AT5G60970 R-ATH-9826682-2 AT5G60970 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT5G61000 R-ATH-9645944-2 AT5G61000 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT5G61380 R-ATH-8933833 AT5G61380 [nucleoplasm] R-ATH-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8933811 Circadian rhythm none Arabidopsis thaliana AT5G61380 R-ATH-8933833 AT5G61380 [nucleoplasm] R-ATH-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9928995 Drought escape (DE) via ABA-dependent pathway none Arabidopsis thaliana AT5G61410 R-ATH-1122934 AT5G61410 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT5G61540 R-ATH-1128812 AT5G61540 [cytosol] R-ATH-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119393 Asparagine degradation I none Arabidopsis thaliana AT5G62000 R-ATH-5608102 AT5G62000 [nucleoplasm] R-ATH-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5608118 Auxin signalling none Arabidopsis thaliana AT5G62530 R-ATH-1124037 AT5G62530 [mitochondrial matrix] R-ATH-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119289 Arginine degradation none Arabidopsis thaliana AT5G62790 R-ATH-1126916 AT5G62790 [plastid stroma] R-ATH-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119464 Methylerythritol phosphate pathway none Arabidopsis thaliana AT5G62980 R-ATH-1127625 AT5G62980 [cytosol] R-ATH-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119265 Tetrahydrofolate biosynthesis I none Arabidopsis thaliana AT5G62980 R-ATH-1127625 AT5G62980 [cytosol] R-ATH-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119523 Tetrahydrofolate biosynthesis II none Arabidopsis thaliana AT5G63110 R-ATH-6787185 AT5G63110 [nucleoplasm] R-ATH-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-6787011 Jasmonic acid signaling none Arabidopsis thaliana AT5G63570 R-ATH-4827081 AT5G63570 [plastid stroma] R-ATH-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-4827054 Tetrapyrrole biosynthesis I none Arabidopsis thaliana AT5G63890 R-ATH-1128989 AT5G63890 [plastid stroma] R-ATH-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119509 Histidine biosynthesis I none Arabidopsis thaliana AT5G63960 R-ATH-9675807 AT5G63960 [nucleoplasm] R-ATH-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675782 Maturation none Arabidopsis thaliana AT5G63960 R-ATH-9675807 AT5G63960 [nucleoplasm] R-ATH-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675815 Leading strand synthesis none Arabidopsis thaliana AT5G63960 R-ATH-9675807 AT5G63960 [nucleoplasm] R-ATH-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675885 Lagging strand synthesis none Arabidopsis thaliana AT5G64300 R-ATH-1128950 AT5G64300 [cytosol] R-ATH-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119379 Flavin biosynthesis none Arabidopsis thaliana AT5G64370 R-ATH-1123575 AT5G64370 [cytosol] R-ATH-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119297 Beta-alanine biosynthesis III none Arabidopsis thaliana AT5G64380 R-ATH-3230566 AT5G64380 [plastid stroma] R-ATH-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119519 Calvin cycle none Arabidopsis thaliana AT5G65010 R-ATH-1122351-2 AT5G65010 [cytosol] R-ATH-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119354 Asparagine biosynthesis III none Arabidopsis thaliana AT5G65010 R-ATH-5633281-2 AT5G65010 [cytosol] R-ATH-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119495 Citrulline biosynthesis none Arabidopsis thaliana AT5G65010 R-ATH-1122351-2 AT5G65010 [cytosol] R-ATH-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119553 Asparagine biosynthesis none Arabidopsis thaliana AT5G65110 R-ATH-1129082 AT5G65110 [mitochondrial matrix] R-ATH-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119445 Beta-alanine biosynthesis II none Arabidopsis thaliana AT5G65320 R-ATH-9826680 AT5G65320 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT5G65420 R-ATH-9640777-2 AT5G65420 [nucleoplasm] R-ATH-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640760 G1 phase none Arabidopsis thaliana AT5G65420 R-ATH-9640777-2 AT5G65420 [nucleoplasm] R-ATH-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640887 G1/S transition none Arabidopsis thaliana AT5G65430 R-ATH-5632192-2 AT5G65430 [cytosol] R-ATH-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-5632095 Brassinosteroid signaling none Arabidopsis thaliana AT5G65720 R-ATH-5083827 AT5G65720 [mitochondrial matrix] R-ATH-1119319 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119319 Alanine biosynthesis III none Arabidopsis thaliana AT5G65720 R-ATH-5083827 AT5G65720 [mitochondrial matrix] R-ATH-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119612 Cysteine degradation none Arabidopsis thaliana AT5G65750 R-ATH-1129818-2 AT5G65750 [mitochondrial matrix] R-ATH-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119365 Lysine degradation II none Arabidopsis thaliana AT5G65750 R-ATH-1173242-2 AT5G65750 [mitochondrial matrix] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT5G65800 R-ATH-1123895-5 AT5G65800 [cytosol] R-ATH-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119334 Ethylene biosynthesis from methionine none Arabidopsis thaliana AT5G65800 R-ATH-1123895-5 AT5G65800 [cytosol] R-ATH-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119624 Methionine salvage pathway none Arabidopsis thaliana AT5G65980 R-ATH-8868994 AT5G65980 [endoplasmic reticulum membrane] R-ATH-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8868949 Intracellular auxin transport none Arabidopsis thaliana AT5G66120 R-ATH-1126440 AT5G66120 [plastid stroma] R-ATH-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119430 Chorismate biosynthesis none Arabidopsis thaliana AT5G66170 R-ATH-9618057 AT5G66170 [cytosol] R-ATH-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9618218 Arsenic uptake and detoxification none Arabidopsis thaliana AT5G66280 R-ATH-1129282-2 AT5G66280 [cytosol] R-ATH-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis thaliana AT5G66280 R-ATH-1129282-2 AT5G66280 [cytosol] R-ATH-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis thaliana AT5G66680 R-ATH-9675274 AT5G66680 [nucleoplasm] R-ATH-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9030654 Primary root development none Arabidopsis thaliana AT5G66700 R-ATH-9826620 HOX12/ OsGT1 [nucleoplasm] R-ATH-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis thaliana AT5G66700 R-ATH-9826620 HOX12/ OsGT1 [nucleoplasm] R-ATH-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Arabidopsis thaliana AT5G66760 R-ATH-1129247 AT5G66760 [mitochondrial inner membrane] R-ATH-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119533 TCA cycle (plant) none Arabidopsis thaliana AT5G66880 R-ATH-4415007 AT5G66880 [cytosol] R-ATH-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis thaliana AT5G66880 R-ATH-4415016 phospho-AT5G66880 [cytosol] R-ATH-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis thaliana AT5G66880 R-ATH-4415007 AT5G66880 [cytosol] R-ATH-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9639861 Development of root hair none Arabidopsis thaliana AT5G67030 R-ATH-4754219 AT5G67030 [plastid stroma] R-ATH-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-1119449 Carotenoid biosynthesis none Arabidopsis thaliana AT5G67100 R-ATH-9645950 AT5G67100 [nucleoplasm] R-ATH-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9645850 Activation of pre-replication complex none Arabidopsis thaliana AT5G67100 R-ATH-9645950 AT5G67100 [nucleoplasm] R-ATH-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675782 Maturation none Arabidopsis thaliana AT5G67100 R-ATH-9645950 AT5G67100 [nucleoplasm] R-ATH-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675815 Leading strand synthesis none Arabidopsis thaliana AT5G67100 R-ATH-9645950 AT5G67100 [nucleoplasm] R-ATH-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675824 DNA replication Initiation none Arabidopsis thaliana AT5G67100 R-ATH-9645950 AT5G67100 [nucleoplasm] R-ATH-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9675885 Lagging strand synthesis none Arabidopsis thaliana AT5G67190 R-ATH-8879009-5 AT5G67190 [nucleoplasm] R-ATH-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-8879007 Response to cold temperature none Arabidopsis thaliana AT5G67260 R-ATH-9640671-2 AT5G67260 [nucleoplasm] R-ATH-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640760 G1 phase none Arabidopsis thaliana AT5G67260 R-ATH-9640671-2 AT5G67260 [nucleoplasm] R-ATH-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ATH-9640887 G1/S transition none Arabidopsis thaliana AUR62000018 R-CQI-5632241 AUR62000018 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62000039 R-CQI-1126542 AUR62000039 [cytosol] R-CQI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119523 Tetrahydrofolate biosynthesis II none Chenopodium quinoa AUR62000039 R-CQI-1126542 AUR62000039 [cytosol] R-CQI-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119617 Folate polyglutamylation I none Chenopodium quinoa AUR62000071 R-CQI-1128989 AUR62000071 [plastid stroma] R-CQI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119509 Histidine biosynthesis I none Chenopodium quinoa AUR62000072 R-CQI-1129769-4 AUR62000072 [cytosol] R-CQI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119332 Jasmonic acid biosynthesis none Chenopodium quinoa AUR62000072 R-CQI-1129769-4 AUR62000072 [cytosol] R-CQI-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119618 13-LOX and 13-HPL pathway none Chenopodium quinoa AUR62000074 R-CQI-1129769 AUR62000074 [cytosol] R-CQI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119332 Jasmonic acid biosynthesis none Chenopodium quinoa AUR62000074 R-CQI-1129769 AUR62000074 [cytosol] R-CQI-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119618 13-LOX and 13-HPL pathway none Chenopodium quinoa AUR62000076 R-CQI-1129769-5 AUR62000076 [cytosol] R-CQI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119332 Jasmonic acid biosynthesis none Chenopodium quinoa AUR62000076 R-CQI-1129769-5 AUR62000076 [cytosol] R-CQI-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119618 13-LOX and 13-HPL pathway none Chenopodium quinoa AUR62000077 R-CQI-1129769-6 AUR62000077 [cytosol] R-CQI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119332 Jasmonic acid biosynthesis none Chenopodium quinoa AUR62000077 R-CQI-1129769-6 AUR62000077 [cytosol] R-CQI-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119618 13-LOX and 13-HPL pathway none Chenopodium quinoa AUR62000107 R-CQI-1129600 AUR62000107 [cytosol] R-CQI-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119407 Ureide biosynthesis none Chenopodium quinoa AUR62000108 R-CQI-1130036 AUR62000108 [endoplasmic reticulum membrane] R-CQI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119402 Phospholipid biosynthesis I none Chenopodium quinoa AUR62000111 R-CQI-9640675 AUR62000111 [nucleoplasm] R-CQI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640882 Assembly of pre-replication complex none Chenopodium quinoa AUR62000111 R-CQI-9640675 AUR62000111 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62000162 R-CQI-1123943 AUR62000162 [plastid] R-CQI-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119365 Lysine degradation II none Chenopodium quinoa AUR62000163 R-CQI-1127928 AUR62000163 [cytosol] R-CQI-1119595 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119595 Mannose degradation none Chenopodium quinoa AUR62000163 R-CQI-1127928 AUR62000163 [cytosol] R-CQI-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119601 Trehalose degradation II none Chenopodium quinoa AUR62000163 R-CQI-1127928 AUR62000163 [cytosol] R-CQI-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119628 GDP-mannose metabolism none Chenopodium quinoa AUR62000179 R-CQI-1129055-2 AUR62000179 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62000195 R-CQI-9611465 AUR62000195 [nucleoplasm] R-CQI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Chenopodium quinoa AUR62000195 R-CQI-9611445 AUR62000195 [nucleoplasm] R-CQI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Chenopodium quinoa AUR62000207 R-CQI-1127373-2 AUR62000207 [cytosol] R-CQI-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119297 Beta-alanine biosynthesis III none Chenopodium quinoa AUR62000231 R-CQI-1128087 AUR62000231 [plastid stroma] R-CQI-1119319 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119319 Alanine biosynthesis III none Chenopodium quinoa AUR62000236 R-CQI-9675866 AUR62000236 [nucleoplasm] R-CQI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675782 Maturation none Chenopodium quinoa AUR62000236 R-CQI-9675866 AUR62000236 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62000236 R-CQI-9675866 AUR62000236 [nucleoplasm] R-CQI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675885 Lagging strand synthesis none Chenopodium quinoa AUR62000244 R-CQI-9608678-2 AUR62000244 [cytosol] R-CQI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9608575 Reproductive meristem phase change none Chenopodium quinoa AUR62000244 R-CQI-8986843-2 AUR62000244 [nucleoplasm] R-CQI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9608575 Reproductive meristem phase change none Chenopodium quinoa AUR62000254 R-CQI-9675272-2 AUR62000254 [plasma membrane] R-CQI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030654 Primary root development none Chenopodium quinoa AUR62000260 R-CQI-1127455-2 AUR62000260 [cytosol] R-CQI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119460 Isoleucine biosynthesis from threonine none Chenopodium quinoa AUR62000260 R-CQI-1127455-2 AUR62000260 [cytosol] R-CQI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119600 Valine biosynthesis none Chenopodium quinoa AUR62000270 R-CQI-9675280 AUR62000270 [nucleoplasm] R-CQI-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030680 Crown root development none Chenopodium quinoa AUR62000306 R-CQI-1129816-2 AUR62000306 [plastid stroma] R-CQI-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119367 Polyisoprenoid biosynthesis none Chenopodium quinoa AUR62000306 R-CQI-1129816-2 AUR62000306 [plastid stroma] R-CQI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119615 Mevalonate pathway none Chenopodium quinoa AUR62000323 R-CQI-8858112 AUR62000323 [plasma membrane] R-CQI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8858053 Polar auxin transport none Chenopodium quinoa AUR62000367 R-CQI-9681905 AUR62000367 [Golgi membrane] R-CQI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119574 UDP-L-arabinose biosynthesis and transport none Chenopodium quinoa AUR62000396 R-CQI-9025712-2 AUR62000396 [cytosol] R-CQI-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025754 Mugineic acid biosynthesis none Chenopodium quinoa AUR62000474 R-CQI-9612399-2 AUR62000474 [peroxisomal matrix] R-CQI-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119612 Cysteine degradation none Chenopodium quinoa AUR62000474 R-CQI-9612380-2 AUR62000474 [cytosol] R-CQI-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119612 Cysteine degradation none Chenopodium quinoa AUR62000485 R-CQI-5654756-4 AUR62000485 [cytosol] R-CQI-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119281 Aspartate biosynthesis I none Chenopodium quinoa AUR62000485 R-CQI-1123648-4 AUR62000485 [plastid] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62000485 R-CQI-5631992-4 AUR62000485 [plastid stroma] R-CQI-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119553 Asparagine biosynthesis none Chenopodium quinoa AUR62000499 R-CQI-9675807 AUR62000499 [nucleoplasm] R-CQI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675782 Maturation none Chenopodium quinoa AUR62000499 R-CQI-9675807 AUR62000499 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62000499 R-CQI-9675807 AUR62000499 [nucleoplasm] R-CQI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675885 Lagging strand synthesis none Chenopodium quinoa AUR62000526 R-CQI-6788234-2 AUR62000526 [cytosol] R-CQI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6788019 Salicylic acid signaling none Chenopodium quinoa AUR62000526 R-CQI-1124041-2 AUR62000526 [nucleoplasm] R-CQI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6788019 Salicylic acid signaling none Chenopodium quinoa AUR62000555 R-CQI-1126955 AUR62000555 [plastid] R-CQI-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119407 Ureide biosynthesis none Chenopodium quinoa AUR62000567 R-CQI-1129879-2 AUR62000567 [cytosol] R-CQI-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119436 Peptidoglycan biosynthesis I none Chenopodium quinoa AUR62000706 R-CQI-1126320 AUR62000706 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62000722 R-CQI-5632301 AUR62000722 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62000722 R-CQI-5632301 AUR62000722 [nucleoplasm] R-CQI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5654828 Strigolactone signaling none Chenopodium quinoa AUR62000722 R-CQI-5632301 AUR62000722 [nucleoplasm] R-CQI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6787011 Jasmonic acid signaling none Chenopodium quinoa AUR62000775 R-CQI-9607149 AUR62000775 [plasma membrane] R-CQI-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9607185 Generation of superoxide radicals none Chenopodium quinoa AUR62000775 R-CQI-9607094 phospho-AUR62000775 [plasma membrane] R-CQI-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9607185 Generation of superoxide radicals none Chenopodium quinoa AUR62000775 R-CQI-9607132 RBOHB [plasma membrane] R-CQI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Chenopodium quinoa AUR62000775 R-CQI-9611529 phospho-phosphorylated-RBOHB [plasma membrane] R-CQI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Chenopodium quinoa AUR62000794 R-CQI-9675849 AUR62000794 [nucleoplasm] R-CQI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675824 DNA replication Initiation none Chenopodium quinoa AUR62000803 R-CQI-9640783 AUR62000803 [nucleoplasm] R-CQI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640760 G1 phase none Chenopodium quinoa AUR62000825 R-CQI-1129247 AUR62000825 [mitochondrial inner membrane] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62000841 R-CQI-1127597 AUR62000841 [cytosol] R-CQI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119615 Mevalonate pathway none Chenopodium quinoa AUR62000842 R-CQI-1127599 AUR62000842 [cytosol] R-CQI-1119388 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119388 IAA biosynthesis VI (via indole-3-acetamide) none Chenopodium quinoa AUR62000859 R-CQI-1129924 AUR62000859 [cytosol] R-CQI-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119342 Gamma-glutamyl cycle none Chenopodium quinoa AUR62000859 R-CQI-1129924 AUR62000859 [cytosol] R-CQI-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119483 Glutathione biosynthesis none Chenopodium quinoa AUR62000871 R-CQI-9826680 AUR62000871 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62000890 R-CQI-1129879 AUR62000890 [cytosol] R-CQI-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119436 Peptidoglycan biosynthesis I none Chenopodium quinoa AUR62000900 R-CQI-5679398-3 AUR62000900 [cytosol] R-CQI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5679411 Gibberellin signaling none Chenopodium quinoa AUR62000914 R-CQI-1127695 AUR62000914 [plastid stroma] R-CQI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119430 Chorismate biosynthesis none Chenopodium quinoa AUR62000929 R-CQI-1124206 AUR62000929 [cytosol] R-CQI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119403 Removal of superoxide radicals none Chenopodium quinoa AUR62000929 R-CQI-1124206 AUR62000929 [cytosol] R-CQI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Chenopodium quinoa AUR62000938 R-CQI-5608164 AUR62000938 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62000938 R-CQI-5608164 AUR62000938 [nucleoplasm] R-CQI-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030557 Lateral root initiation none Chenopodium quinoa AUR62000938 R-CQI-5608164 AUR62000938 [nucleoplasm] R-CQI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9608575 Reproductive meristem phase change none Chenopodium quinoa AUR62000938 R-CQI-9658967 AUR62000938 [cytosol] R-CQI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9608575 Reproductive meristem phase change none Chenopodium quinoa AUR62000966 R-CQI-1126794 AUR62000966 [cytosol] R-CQI-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119331 Cysteine biosynthesis I none Chenopodium quinoa AUR62000984 R-CQI-1125038 AUR62000984 [plastid stroma] R-CQI-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119449 Carotenoid biosynthesis none Chenopodium quinoa AUR62001012 R-CQI-9682506 AUR62001012 [cytosol] R-CQI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119410 Ascorbate biosynthesis none Chenopodium quinoa AUR62001026 R-CQI-1127705 AUR62001026 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62001068 R-CQI-8854108-2 AUR62001068 [cytosol] R-CQI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119556 Choline biosynthesis I none Chenopodium quinoa AUR62001081 R-CQI-5225766-2 AUR62001081 [nucleoplasm] R-CQI-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5225756 Ethylene mediated signaling none Chenopodium quinoa AUR62001097 R-CQI-3315084 AUR62001097 [cytosol] R-CQI-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119342 Gamma-glutamyl cycle none Chenopodium quinoa AUR62001104 R-CQI-1123046 AUR62001104 [cytosol] R-CQI-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119386 UDP-N-acetylgalactosamine biosynthesis none Chenopodium quinoa AUR62001110 R-CQI-1123745-2 AUR62001110 [endoplasmic reticulum membrane] R-CQI-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119260 Cardiolipin biosynthesis none Chenopodium quinoa AUR62001110 R-CQI-1123745-2 AUR62001110 [endoplasmic reticulum membrane] R-CQI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119402 Phospholipid biosynthesis I none Chenopodium quinoa AUR62001201 R-CQI-1127151 AUR62001201 [cytosol] R-CQI-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119384 NAD biosynthesis I (from aspartate) none Chenopodium quinoa AUR62001325 R-CQI-1125910-2 AUR62001325 [plastid stroma] R-CQI-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119367 Polyisoprenoid biosynthesis none Chenopodium quinoa AUR62001341 R-CQI-1123867 AUR62001341 [cytosol] R-CQI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119370 Sterol biosynthesis none Chenopodium quinoa AUR62001353 R-CQI-1126034 AUR62001353 [cytosol] R-CQI-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119534 Pyridoxal 5'-phosphate salvage pathway none Chenopodium quinoa AUR62001353 R-CQI-1126034 AUR62001353 [cytosol] R-CQI-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119594 Pyridoxal 5'-phosphate biosynthesis none Chenopodium quinoa AUR62001364 R-CQI-1129390-2 AUR62001364 [mitochondrion] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62001422 R-CQI-9928801-2 AUR62001422 [nucleoplasm] R-CQI-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9928995 Drought escape (DE) via ABA-dependent pathway none Chenopodium quinoa AUR62001441 R-CQI-8987499 AUR62001441 [peroxisomal matrix] R-CQI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119312 Photorespiration none Chenopodium quinoa AUR62001441 R-CQI-1130222 AUR62001441 [cytosol] R-CQI-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119596 Glutamate biosynthesis I none Chenopodium quinoa AUR62001464 R-CQI-1124813-2 AUR62001464 [mitochondrial matrix] R-CQI-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119337 Proline degradation none Chenopodium quinoa AUR62001464 R-CQI-8986570-2 AUR62001464 [mitochondrial matrix] R-CQI-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119365 Lysine degradation II none Chenopodium quinoa AUR62001464 R-CQI-9658682-2 AUR62001464 [cytosol] R-CQI-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119567 Beta-alanine biosynthesis I none Chenopodium quinoa AUR62001467 R-CQI-1123433-3 AUR62001467 [cytosol] R-CQI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119332 Jasmonic acid biosynthesis none Chenopodium quinoa AUR62001467 R-CQI-1123433-3 AUR62001467 [cytosol] R-CQI-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119618 13-LOX and 13-HPL pathway none Chenopodium quinoa AUR62001480 R-CQI-9681915-4 AUR62001480 [Golgi membrane] R-CQI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119574 UDP-L-arabinose biosynthesis and transport none Chenopodium quinoa AUR62001530 R-CQI-1127161-2 AUR62001530 [cytosol] R-CQI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119486 IAA biosynthesis I none Chenopodium quinoa AUR62001537 R-CQI-9640739 AUR62001537 [nucleoplasm] R-CQI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640887 G1/S transition none Chenopodium quinoa AUR62001538 R-CQI-9640739-4 AUR62001538 [nucleoplasm] R-CQI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640887 G1/S transition none Chenopodium quinoa AUR62001558 R-CQI-5632111-2 AUR62001558 [cytosol] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62001558 R-CQI-5632216-2 phospho-AUR62001558 [cytosol] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62001574 R-CQI-9826669-2 OsYABBY6 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62001575 R-CQI-1126604-2 AUR62001575 [cytosol] R-CQI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119438 Secologanin and strictosidine biosynthesis none Chenopodium quinoa AUR62001590 R-CQI-1250418 AUR62001590 [cytosol] R-CQI-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119374 Abscisic acid biosynthesis none Chenopodium quinoa AUR62001590 R-CQI-1129637 AUR62001590 [cytosol] R-CQI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119486 IAA biosynthesis I none Chenopodium quinoa AUR62001595 R-CQI-1125151-2 AUR62001595 [cytosol] R-CQI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119400 Methionine biosynthesis II none Chenopodium quinoa AUR62001595 R-CQI-1125151-2 AUR62001595 [cytosol] R-CQI-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119501 S-adenosyl-L-methionine cycle none Chenopodium quinoa AUR62001609 R-CQI-1126387 AUR62001609 [cytosol] R-CQI-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119295 Homoserine biosynthesis none Chenopodium quinoa AUR62001666 R-CQI-1123998-2 AUR62001666 [chloroplast] R-CQI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119494 Tryptophan biosynthesis none Chenopodium quinoa AUR62001669 R-CQI-1123998-3 AUR62001669 [chloroplast] R-CQI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119494 Tryptophan biosynthesis none Chenopodium quinoa AUR62001671 R-CQI-9640886 AUR62001671 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62001685 R-CQI-1129355 AUR62001685 [plastid] R-CQI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119403 Removal of superoxide radicals none Chenopodium quinoa AUR62001707 R-CQI-9640689 AUR62001707 [nucleoplasm] R-CQI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675782 Maturation none Chenopodium quinoa AUR62001707 R-CQI-9640689 AUR62001707 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62001707 R-CQI-9640689 AUR62001707 [nucleoplasm] R-CQI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675885 Lagging strand synthesis none Chenopodium quinoa AUR62001708 R-CQI-9681885 AUR62001708 [Golgi membrane] R-CQI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119574 UDP-L-arabinose biosynthesis and transport none Chenopodium quinoa AUR62001729 R-CQI-1127539 AUR62001729 [cytosol] R-CQI-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Chenopodium quinoa AUR62001729 R-CQI-1127539 AUR62001729 [cytosol] R-CQI-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119439 Cholesterol biosynthesis III (via desmosterol) none Chenopodium quinoa AUR62001729 R-CQI-1127539 AUR62001729 [cytosol] R-CQI-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119559 Cholesterol biosynthesis I none Chenopodium quinoa AUR62001731 R-CQI-4415078 AUR62001731 [cytosol] R-CQI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-3899351 Abscisic acid (ABA) mediated signaling none Chenopodium quinoa AUR62001777 R-CQI-9684723 AUR62001777 [cytosol] R-CQI-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9609102 Flower development none Chenopodium quinoa AUR62001779 R-CQI-9611477 phospho-phosphorylated-RLCK176 [cytosol] R-CQI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Chenopodium quinoa AUR62001780 R-CQI-5149632-3 AUR62001780 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62001790 R-CQI-1129438-4 AUR62001790 [cytosol] R-CQI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119438 Secologanin and strictosidine biosynthesis none Chenopodium quinoa AUR62001806 R-CQI-9611544-2 SPL11 [nucleoplasm] R-CQI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Chenopodium quinoa AUR62001806 R-CQI-9611440-2 phospho-phosphorylated-SPL11 [nucleoplasm] R-CQI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Chenopodium quinoa AUR62001843 R-CQI-1126172-2 AUR62001843 [cytosol] R-CQI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119379 Flavin biosynthesis none Chenopodium quinoa AUR62001861 R-CQI-9639874-2 AUR62001861 [plasma membrane] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62001898 R-CQI-8879009-2 AUR62001898 [nucleoplasm] R-CQI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8879007 Response to cold temperature none Chenopodium quinoa AUR62001915 R-CQI-9645950 AUR62001915 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62001915 R-CQI-9645950 AUR62001915 [nucleoplasm] R-CQI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675782 Maturation none Chenopodium quinoa AUR62001915 R-CQI-9645950 AUR62001915 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62001915 R-CQI-9645950 AUR62001915 [nucleoplasm] R-CQI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675824 DNA replication Initiation none Chenopodium quinoa AUR62001915 R-CQI-9645950 AUR62001915 [nucleoplasm] R-CQI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675885 Lagging strand synthesis none Chenopodium quinoa AUR62001921 R-CQI-9916305 AUR62001921 [nucleoplasm] R-CQI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9916190 Root angle formation: elongation and curvature response none Chenopodium quinoa AUR62001926 R-CQI-4754219 AUR62001926 [plastid stroma] R-CQI-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119449 Carotenoid biosynthesis none Chenopodium quinoa AUR62001966 R-CQI-4415007-2 AUR62001966 [cytosol] R-CQI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-3899351 Abscisic acid (ABA) mediated signaling none Chenopodium quinoa AUR62001966 R-CQI-4415016-2 phospho-AUR62001966 [cytosol] R-CQI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-3899351 Abscisic acid (ABA) mediated signaling none Chenopodium quinoa AUR62001966 R-CQI-4415007-2 AUR62001966 [cytosol] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62002010 R-CQI-1122351 AUR62002010 [cytosol] R-CQI-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119354 Asparagine biosynthesis III none Chenopodium quinoa AUR62002010 R-CQI-5633281 AUR62002010 [cytosol] R-CQI-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119495 Citrulline biosynthesis none Chenopodium quinoa AUR62002010 R-CQI-1122351 AUR62002010 [cytosol] R-CQI-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119553 Asparagine biosynthesis none Chenopodium quinoa AUR62002018 R-CQI-1123096-2 AUR62002018 [mitochondrial inner membrane] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62002026 R-CQI-1129082-2 AUR62002026 [mitochondrial matrix] R-CQI-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119445 Beta-alanine biosynthesis II none Chenopodium quinoa AUR62002031 R-CQI-1129964 AUR62002031 [cytosol] R-CQI-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119378 Myo-inositol biosynthesis none Chenopodium quinoa AUR62002031 R-CQI-1129964 AUR62002031 [cytosol] R-CQI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119434 Phytic acid biosynthesis (lipid-independent) none Chenopodium quinoa AUR62002056 R-CQI-9645866 AUR62002056 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62002056 R-CQI-9645866 AUR62002056 [nucleoplasm] R-CQI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675824 DNA replication Initiation none Chenopodium quinoa AUR62002064 R-CQI-1129650 AUR62002064 [cytosol] R-CQI-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119418 Suberin biosynthesis none Chenopodium quinoa AUR62002066 R-CQI-1127398 AUR62002066 [plasma membrane] R-CQI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119314 Cellulose biosynthesis none Chenopodium quinoa AUR62002066 R-CQI-1127398 AUR62002066 [plasma membrane] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62002081 R-CQI-9638999 AUR62002081 [cytosol] R-CQI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119434 Phytic acid biosynthesis (lipid-independent) none Chenopodium quinoa AUR62002094 R-CQI-9035614 AUR62002094 [cytosol] R-CQI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9035605 Regulation of seed size none Chenopodium quinoa AUR62002094 R-CQI-9035651 AUR62002094 [nucleoplasm] R-CQI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9035605 Regulation of seed size none Chenopodium quinoa AUR62002095 R-CQI-3321260 AUR62002095 [chloroplast stroma] R-CQI-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119287 Vitamin E biosynthesis none Chenopodium quinoa AUR62002114 R-CQI-6786994 AUR62002114 [nucleoplasm] R-CQI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6787011 Jasmonic acid signaling none Chenopodium quinoa AUR62002133 R-CQI-8933738 AUR62002133 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62002173 R-CQI-5683263 AUR62002173 [cytosol] R-CQI-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119586 Cyanate degradation none Chenopodium quinoa AUR62002193 R-CQI-1126888 AUR62002193 [cytosol] R-CQI-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119360 Fructan biosynthesis none Chenopodium quinoa AUR62002194 R-CQI-1125569 AUR62002194 [cytosol] R-CQI-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119516 Trehalose biosynthesis I none Chenopodium quinoa AUR62002209 R-CQI-5633332-2 AUR62002209 [plastid stroma] R-CQI-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5633340 Citrulline-nitric oxide cycle none Chenopodium quinoa AUR62002233 R-CQI-1128812-2 AUR62002233 [cytosol] R-CQI-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119393 Asparagine degradation I none Chenopodium quinoa AUR62002234 R-CQI-9025447 AUR62002234 [cytosol] R-CQI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119325 Sphingolipid metabolism none Chenopodium quinoa AUR62002236 R-CQI-1127820 AUR62002236 [plasma membrane] R-CQI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119314 Cellulose biosynthesis none Chenopodium quinoa AUR62002250 R-CQI-9658563-2 AUR62002250 [endoplasmic reticulum lumen] R-CQI-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119502 Allantoin degradation none Chenopodium quinoa AUR62002259 R-CQI-5225766-3 AUR62002259 [nucleoplasm] R-CQI-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5225756 Ethylene mediated signaling none Chenopodium quinoa AUR62002269 R-CQI-1123430-3 AUR62002269 [cytosol] R-CQI-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119437 Glutathione redox reactions I none Chenopodium quinoa AUR62002291 R-CQI-1129136 AUR62002291 [plastid stroma] R-CQI-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Chenopodium quinoa AUR62002295 R-CQI-5138486 AUR62002295 [plastid stroma] R-CQI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119263 Arginine biosynthesis none Chenopodium quinoa AUR62002295 R-CQI-1123709 AUR62002295 [cytosol] R-CQI-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119318 Proline biosynthesis V (from arginine) none Chenopodium quinoa AUR62002295 R-CQI-1123709 AUR62002295 [cytosol] R-CQI-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119444 Canavanine biosynthesis none Chenopodium quinoa AUR62002297 R-CQI-9675297 AUR62002297 [mitochondrion] R-CQI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030654 Primary root development none Chenopodium quinoa AUR62002335 R-CQI-1125989-2 AUR62002335 [cytosol] R-CQI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119438 Secologanin and strictosidine biosynthesis none Chenopodium quinoa AUR62002409 R-CQI-1122545 AUR62002409 [cytosol] R-CQI-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119331 Cysteine biosynthesis I none Chenopodium quinoa AUR62002418 R-CQI-1127173-2 AUR62002418 [cytosol] R-CQI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119540 Leucine biosynthesis none Chenopodium quinoa AUR62002420 R-CQI-9675391 AUR62002420 [nucleoplasm] R-CQI-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675508 Root elongation none Chenopodium quinoa AUR62002425 R-CQI-9639789-4 AUR62002425 [plasma membrane] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62002447 R-CQI-1124523-2 AUR62002447 [cytosol] R-CQI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119460 Isoleucine biosynthesis from threonine none Chenopodium quinoa AUR62002447 R-CQI-1124523-2 AUR62002447 [cytosol] R-CQI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119600 Valine biosynthesis none Chenopodium quinoa AUR62002485 R-CQI-9639010-2 AUR62002485 [cytosol] R-CQI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119434 Phytic acid biosynthesis (lipid-independent) none Chenopodium quinoa AUR62002492 R-CQI-1123563 AUR62002492 [cytosol] R-CQI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119379 Flavin biosynthesis none Chenopodium quinoa AUR62002494 R-CQI-1128613 AUR62002494 [cytosol] R-CQI-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119316 Phenylpropanoid biosynthesis none Chenopodium quinoa AUR62002523 R-CQI-1129914 AUR62002523 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62002588 R-CQI-8986605 AUR62002588 [mitochondrial matrix] R-CQI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119312 Photorespiration none Chenopodium quinoa AUR62002588 R-CQI-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-CQI-1119351 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119351 Mitochondrial pyruvate metabolism none Chenopodium quinoa AUR62002588 R-CQI-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62002608 R-CQI-9918267 ISA2 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62002618 R-CQI-9681915-2 AUR62002618 [Golgi membrane] R-CQI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119574 UDP-L-arabinose biosynthesis and transport none Chenopodium quinoa AUR62002635 R-CQI-9930255 MPK15 [nucleoplasm] R-CQI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9766881 TF network involved in salinity response none Chenopodium quinoa AUR62002672 R-CQI-1122605-2 AUR62002672 [cytosol] R-CQI-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119341 Galactosylcyclitol biosynthesis none Chenopodium quinoa AUR62002682 R-CQI-1128624-2 AUR62002682 [mitochondrial inner membrane] R-CQI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119479 Valine degradation none Chenopodium quinoa AUR62002694 R-CQI-9826635 PCF8 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62002697 R-CQI-5631953-2 AUR62002697 [mitochondrial matrix] R-CQI-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119289 Arginine degradation none Chenopodium quinoa AUR62002697 R-CQI-1124214-2 AUR62002697 [cytosol] R-CQI-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119318 Proline biosynthesis V (from arginine) none Chenopodium quinoa AUR62002697 R-CQI-1124214-2 AUR62002697 [cytosol] R-CQI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119610 Biotin biosynthesis II none Chenopodium quinoa AUR62002719 R-CQI-1123470-4 AUR62002719 [cytosol] R-CQI-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119292 Cytokinins 7-N-glucoside biosynthesis none Chenopodium quinoa AUR62002719 R-CQI-1123470-4 AUR62002719 [cytosol] R-CQI-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119375 Cytokinins 9-N-glucoside biosynthesis none Chenopodium quinoa AUR62002719 R-CQI-1123470-4 AUR62002719 [cytosol] R-CQI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119473 Cytokinins-O-glucoside biosynthesis none Chenopodium quinoa AUR62002720 R-CQI-1127383-4 AUR62002720 [cytosol] R-CQI-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119596 Glutamate biosynthesis I none Chenopodium quinoa AUR62002721 R-CQI-1127383-3 AUR62002721 [cytosol] R-CQI-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119596 Glutamate biosynthesis I none Chenopodium quinoa AUR62002735 R-CQI-5221144 AUR62002735 [plastid] R-CQI-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119374 Abscisic acid biosynthesis none Chenopodium quinoa AUR62002771 R-CQI-9025372-2 AUR62002771 [endoplasmic reticulum membrane] R-CQI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119402 Phospholipid biosynthesis I none Chenopodium quinoa AUR62002817 R-CQI-1129769-2 AUR62002817 [cytosol] R-CQI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119332 Jasmonic acid biosynthesis none Chenopodium quinoa AUR62002817 R-CQI-1129769-2 AUR62002817 [cytosol] R-CQI-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119618 13-LOX and 13-HPL pathway none Chenopodium quinoa AUR62002867 R-CQI-9826604-2 AUR62002867 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62002869 R-CQI-1129111-2 AUR62002869 [cytosol] R-CQI-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119349 S-methylmethionine cycle none Chenopodium quinoa AUR62002869 R-CQI-1129111-2 AUR62002869 [cytosol] R-CQI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119400 Methionine biosynthesis II none Chenopodium quinoa AUR62002903 R-CQI-5632316 AUR62002903 [cytosol] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62003055 R-CQI-9675803-2 AUR62003055 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62003082 R-CQI-1129585-2 AUR62003082 [cytosol] R-CQI-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119265 Tetrahydrofolate biosynthesis I none Chenopodium quinoa AUR62003082 R-CQI-1129585-2 AUR62003082 [cytosol] R-CQI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119523 Tetrahydrofolate biosynthesis II none Chenopodium quinoa AUR62003134 R-CQI-1125275 AUR62003134 [cytosol] R-CQI-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119629 Thiamine biosynthesis none Chenopodium quinoa AUR62003158 R-CQI-1123757 AUR62003158 [cytosol] R-CQI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119460 Isoleucine biosynthesis from threonine none Chenopodium quinoa AUR62003158 R-CQI-1123757 AUR62003158 [cytosol] R-CQI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119473 Cytokinins-O-glucoside biosynthesis none Chenopodium quinoa AUR62003158 R-CQI-1123757 AUR62003158 [cytosol] R-CQI-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119496 Pantothenate biosynthesis I none Chenopodium quinoa AUR62003158 R-CQI-1123757 AUR62003158 [cytosol] R-CQI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119540 Leucine biosynthesis none Chenopodium quinoa AUR62003158 R-CQI-1123757 AUR62003158 [cytosol] R-CQI-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119544 Pantothenate biosynthesis II none Chenopodium quinoa AUR62003173 R-CQI-1122593-2 AUR62003173 [cytosol] R-CQI-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119436 Peptidoglycan biosynthesis I none Chenopodium quinoa AUR62003173 R-CQI-1122593-2 AUR62003173 [cytosol] R-CQI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119523 Tetrahydrofolate biosynthesis II none Chenopodium quinoa AUR62003173 R-CQI-1122593-2 AUR62003173 [cytosol] R-CQI-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119617 Folate polyglutamylation I none Chenopodium quinoa AUR62003200 R-CQI-9675274-2 AUR62003200 [nucleoplasm] R-CQI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030654 Primary root development none Chenopodium quinoa AUR62003217 R-CQI-9618171 AUR62003217 [plasma membrane] R-CQI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9618218 Arsenic uptake and detoxification none Chenopodium quinoa AUR62003254 R-CQI-9766892 SAPK1 [nucleoplasm] R-CQI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9766881 TF network involved in salinity response none Chenopodium quinoa AUR62003285 R-CQI-9640777 AUR62003285 [nucleoplasm] R-CQI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640760 G1 phase none Chenopodium quinoa AUR62003285 R-CQI-9640777 AUR62003285 [nucleoplasm] R-CQI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640887 G1/S transition none Chenopodium quinoa AUR62003286 R-CQI-5632192-4 AUR62003286 [cytosol] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62003305 R-CQI-1130308-3 AUR62003305 [plastid stroma] R-CQI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119430 Chorismate biosynthesis none Chenopodium quinoa AUR62003336 R-CQI-5654816-2 AUR62003336 [nucleoplasm] R-CQI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5654828 Strigolactone signaling none Chenopodium quinoa AUR62003338 R-CQI-1126440 AUR62003338 [plastid stroma] R-CQI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119430 Chorismate biosynthesis none Chenopodium quinoa AUR62003355 R-CQI-9618057-2 AUR62003355 [cytosol] R-CQI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9618218 Arsenic uptake and detoxification none Chenopodium quinoa AUR62003361 R-CQI-1129818-6 AUR62003361 [mitochondrial matrix] R-CQI-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119365 Lysine degradation II none Chenopodium quinoa AUR62003361 R-CQI-1173242-6 AUR62003361 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62003368 R-CQI-2672431-2 AUR62003368 [cytosol] R-CQI-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119322 Leucodelphinidin biosynthesis none Chenopodium quinoa AUR62003368 R-CQI-2672431-2 AUR62003368 [cytosol] R-CQI-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Chenopodium quinoa AUR62003368 R-CQI-1124195-2 AUR62003368 [cytosol] R-CQI-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119531 Flavonoid biosynthesis none Chenopodium quinoa AUR62003388 R-CQI-1125182 AUR62003388 [plastid stroma] R-CQI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119430 Chorismate biosynthesis none Chenopodium quinoa AUR62003395 R-CQI-1126488 AUR62003395 [mitochondrial inner membrane] R-CQI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119402 Phospholipid biosynthesis I none Chenopodium quinoa AUR62003403 R-CQI-1126554 AUR62003403 [cytosol] R-CQI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119452 Galactose degradation II none Chenopodium quinoa AUR62003475 R-CQI-5679402 AUR62003475 [nucleoplasm] R-CQI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5679411 Gibberellin signaling none Chenopodium quinoa AUR62003484 R-CQI-1127019 AUR62003484 [cytosol] R-CQI-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119458 Glutamate degradation none Chenopodium quinoa AUR62003508 R-CQI-9612406 AUR62003508 [mitochondrial matrix] R-CQI-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119612 Cysteine degradation none Chenopodium quinoa AUR62003520 R-CQI-1126549 AUR62003520 [cytosol] R-CQI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119486 IAA biosynthesis I none Chenopodium quinoa AUR62003530 R-CQI-9026148 AUR62003530 [mitochondrion] R-CQI-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119458 Glutamate degradation none Chenopodium quinoa AUR62003530 R-CQI-1130288 AUR62003530 [cytosol] R-CQI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119610 Biotin biosynthesis II none Chenopodium quinoa AUR62003531 R-CQI-9026148-2 AUR62003531 [mitochondrion] R-CQI-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119458 Glutamate degradation none Chenopodium quinoa AUR62003531 R-CQI-1130288-2 AUR62003531 [cytosol] R-CQI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119610 Biotin biosynthesis II none Chenopodium quinoa AUR62003536 R-CQI-1125187 AUR62003536 [cytosol] R-CQI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119276 Choline biosynthesis III none Chenopodium quinoa AUR62003546 R-CQI-1129896 AUR62003546 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62003554 R-CQI-9675857 AUR62003554 [nucleoplasm] R-CQI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675782 Maturation none Chenopodium quinoa AUR62003557 R-CQI-8933842 AUR62003557 [cytosol] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62003557 R-CQI-8933843 AUR62003557 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62003579 R-CQI-5221144-3 AUR62003579 [plastid] R-CQI-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119374 Abscisic acid biosynthesis none Chenopodium quinoa AUR62003582 R-CQI-9611889-2 AUR62003582 [mitochondrial matrix] R-CQI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119479 Valine degradation none Chenopodium quinoa AUR62003689 R-CQI-1126269 AUR62003689 [mitochondrial matrix] R-CQI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119479 Valine degradation none Chenopodium quinoa AUR62003711 R-CQI-8868866-6 AUR62003711 [endoplasmic reticulum membrane] R-CQI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8868949 Intracellular auxin transport none Chenopodium quinoa AUR62003712 R-CQI-9826620-2 HOX12/ OsGT1 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62003712 R-CQI-9826620-2 HOX12/ OsGT1 [nucleoplasm] R-CQI-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Chenopodium quinoa AUR62003717 R-CQI-1124496-3 AUR62003717 [cytosol] R-CQI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119615 Mevalonate pathway none Chenopodium quinoa AUR62003733 R-CQI-8868994 AUR62003733 [endoplasmic reticulum membrane] R-CQI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8868949 Intracellular auxin transport none Chenopodium quinoa AUR62003767 R-CQI-1129964-2 AUR62003767 [cytosol] R-CQI-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119378 Myo-inositol biosynthesis none Chenopodium quinoa AUR62003767 R-CQI-1129964-2 AUR62003767 [cytosol] R-CQI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119434 Phytic acid biosynthesis (lipid-independent) none Chenopodium quinoa AUR62003772 R-CQI-1129082 AUR62003772 [mitochondrial matrix] R-CQI-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119445 Beta-alanine biosynthesis II none Chenopodium quinoa AUR62003783 R-CQI-1123096 AUR62003783 [mitochondrial inner membrane] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62003792 R-CQI-1122351-2 AUR62003792 [cytosol] R-CQI-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119354 Asparagine biosynthesis III none Chenopodium quinoa AUR62003792 R-CQI-5633281-2 AUR62003792 [cytosol] R-CQI-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119495 Citrulline biosynthesis none Chenopodium quinoa AUR62003792 R-CQI-1122351-2 AUR62003792 [cytosol] R-CQI-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119553 Asparagine biosynthesis none Chenopodium quinoa AUR62003840 R-CQI-4415007 AUR62003840 [cytosol] R-CQI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-3899351 Abscisic acid (ABA) mediated signaling none Chenopodium quinoa AUR62003840 R-CQI-4415016 phospho-AUR62003840 [cytosol] R-CQI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-3899351 Abscisic acid (ABA) mediated signaling none Chenopodium quinoa AUR62003840 R-CQI-4415007 AUR62003840 [cytosol] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62003875 R-CQI-9826649 AUR62003875 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62003876 R-CQI-9826606 AUR62003876 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62003884 R-CQI-4754219-2 AUR62003884 [plastid stroma] R-CQI-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119449 Carotenoid biosynthesis none Chenopodium quinoa AUR62003888 R-CQI-9916305-2 AUR62003888 [nucleoplasm] R-CQI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9916190 Root angle formation: elongation and curvature response none Chenopodium quinoa AUR62003893 R-CQI-9645950-2 AUR62003893 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62003893 R-CQI-9645950-2 AUR62003893 [nucleoplasm] R-CQI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675782 Maturation none Chenopodium quinoa AUR62003893 R-CQI-9645950-2 AUR62003893 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62003893 R-CQI-9645950-2 AUR62003893 [nucleoplasm] R-CQI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675824 DNA replication Initiation none Chenopodium quinoa AUR62003893 R-CQI-9645950-2 AUR62003893 [nucleoplasm] R-CQI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675885 Lagging strand synthesis none Chenopodium quinoa AUR62003913 R-CQI-8879009 AUR62003913 [nucleoplasm] R-CQI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8879007 Response to cold temperature none Chenopodium quinoa AUR62003932 R-CQI-9640671 AUR62003932 [nucleoplasm] R-CQI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640760 G1 phase none Chenopodium quinoa AUR62003932 R-CQI-9640671 AUR62003932 [nucleoplasm] R-CQI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640887 G1/S transition none Chenopodium quinoa AUR62003955 R-CQI-1123819-2 AUR62003955 [plastid stroma] R-CQI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119464 Methylerythritol phosphate pathway none Chenopodium quinoa AUR62003990 R-CQI-8933816 AUR62003990 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62004014 R-CQI-9658611-2 AUR62004014 [plastid stroma] R-CQI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119263 Arginine biosynthesis none Chenopodium quinoa AUR62004014 R-CQI-9658611-2 AUR62004014 [plastid stroma] R-CQI-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119539 Ornithine biosynthesis none Chenopodium quinoa AUR62004014 R-CQI-9658611-2 AUR62004014 [plastid stroma] R-CQI-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119622 Arginine biosynthesis II (acetyl cycle) none Chenopodium quinoa AUR62004022 R-CQI-5655075 AUR62004022 [Golgi lumen] R-CQI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5655101 Xyloglucan biosynthesis none Chenopodium quinoa AUR62004030 R-CQI-9035593 AUR62004030 [cytosol] R-CQI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9035605 Regulation of seed size none Chenopodium quinoa AUR62004030 R-CQI-9035634 AUR62004030 [nucleoplasm] R-CQI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9035605 Regulation of seed size none Chenopodium quinoa AUR62004030 R-CQI-9035593 AUR62004030 [cytosol] R-CQI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9608575 Reproductive meristem phase change none Chenopodium quinoa AUR62004030 R-CQI-9035634 AUR62004030 [nucleoplasm] R-CQI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9608575 Reproductive meristem phase change none Chenopodium quinoa AUR62004042 R-CQI-1123895 AUR62004042 [cytosol] R-CQI-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119334 Ethylene biosynthesis from methionine none Chenopodium quinoa AUR62004042 R-CQI-1123895 AUR62004042 [cytosol] R-CQI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119624 Methionine salvage pathway none Chenopodium quinoa AUR62004044 R-CQI-1129247-3 AUR62004044 [mitochondrial inner membrane] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62004059 R-CQI-1127815-3 AUR62004059 [cytosol] R-CQI-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119450 Homocysteine biosynthesis none Chenopodium quinoa AUR62004066 R-CQI-9916252-2 OsEGT1 [nucleoplasm] R-CQI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9916190 Root angle formation: elongation and curvature response none Chenopodium quinoa AUR62004071 R-CQI-9916124-4 OsPRX95 [extracellular region] R-CQI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119403 Removal of superoxide radicals none Chenopodium quinoa AUR62004071 R-CQI-9916124-4 OsPRX95 [extracellular region] R-CQI-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9607185 Generation of superoxide radicals none Chenopodium quinoa AUR62004097 R-CQI-9639957-2 AUR62004097 [plasma membrane] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62004131 R-CQI-9826639 AUR62004131 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62004137 R-CQI-5367777 AUR62004137 [plastid stroma] R-CQI-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5367729 Strigolactone biosynthesis none Chenopodium quinoa AUR62004157 R-CQI-9924407-2 EXPB5 [basolateral plasma membrane] R-CQI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924451 Shoot (tiller) formation and regulation of tiller angle none Chenopodium quinoa AUR62004178 R-CQI-1126354 AUR62004178 [cytosol] R-CQI-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119513 Pinobanksin biosynthesis none Chenopodium quinoa AUR62004178 R-CQI-1126354 AUR62004178 [cytosol] R-CQI-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119531 Flavonoid biosynthesis none Chenopodium quinoa AUR62004178 R-CQI-1126354 AUR62004178 [cytosol] R-CQI-1119630 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119630 Resveratrol biosynthesis none Chenopodium quinoa AUR62004190 R-CQI-5631969 AUR62004190 [mitochondrial matrix] R-CQI-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119289 Arginine degradation none Chenopodium quinoa AUR62004190 R-CQI-5633275 AUR62004190 [cytosol] R-CQI-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119495 Citrulline biosynthesis none Chenopodium quinoa AUR62004194 R-CQI-1130247-2 AUR62004194 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62004196 R-CQI-1126421 AUR62004196 [cytosol] R-CQI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119428 GDP-D-rhamnose biosynthesis none Chenopodium quinoa AUR62004196 R-CQI-1126421 AUR62004196 [cytosol] R-CQI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Chenopodium quinoa AUR62004314 R-CQI-5146758-3 AUR62004314 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62004317 R-CQI-1125670-3 AUR62004317 [cytosol] R-CQI-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119393 Asparagine degradation I none Chenopodium quinoa AUR62004328 R-CQI-5138484-2 AUR62004328 [plastid stroma] R-CQI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119263 Arginine biosynthesis none Chenopodium quinoa AUR62004328 R-CQI-5138484-2 AUR62004328 [plastid stroma] R-CQI-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119539 Ornithine biosynthesis none Chenopodium quinoa AUR62004328 R-CQI-5138484-2 AUR62004328 [plastid stroma] R-CQI-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119622 Arginine biosynthesis II (acetyl cycle) none Chenopodium quinoa AUR62004345 R-CQI-1125834 AUR62004345 [cytosol] R-CQI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119379 Flavin biosynthesis none Chenopodium quinoa AUR62004371 R-CQI-9640694-2 AUR62004371 [nucleoplasm] R-CQI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640882 Assembly of pre-replication complex none Chenopodium quinoa AUR62004371 R-CQI-9640694-2 AUR62004371 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62004393 R-CQI-1129311 AUR62004393 [cytosol] R-CQI-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Chenopodium quinoa AUR62004409 R-CQI-1129892 AUR62004409 [cytosol] R-CQI-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119334 Ethylene biosynthesis from methionine none Chenopodium quinoa AUR62004409 R-CQI-1129892 AUR62004409 [cytosol] R-CQI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119624 Methionine salvage pathway none Chenopodium quinoa AUR62004413 R-CQI-1129411 AUR62004413 [cytosol] R-CQI-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119496 Pantothenate biosynthesis I none Chenopodium quinoa AUR62004413 R-CQI-1129411 AUR62004413 [cytosol] R-CQI-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119544 Pantothenate biosynthesis II none Chenopodium quinoa AUR62004454 R-CQI-8933788-3 AUR62004454 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62004458 R-CQI-6787184 AUR62004458 [cytosol] R-CQI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6787011 Jasmonic acid signaling none Chenopodium quinoa AUR62004459 R-CQI-6787202-2 AUR62004459 [cytosol] R-CQI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6787011 Jasmonic acid signaling none Chenopodium quinoa AUR62004466 R-CQI-9826647 AUR62004466 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62004505 R-CQI-6787066-4 AUR62004505 [nucleoplasm] R-CQI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6787011 Jasmonic acid signaling none Chenopodium quinoa AUR62004506 R-CQI-9675365-2 AUR62004506 [nucleoplasm] R-CQI-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675508 Root elongation none Chenopodium quinoa AUR62004514 R-CQI-1126671 AUR62004514 [cytosol] R-CQI-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119534 Pyridoxal 5'-phosphate salvage pathway none Chenopodium quinoa AUR62004514 R-CQI-1126671 AUR62004514 [cytosol] R-CQI-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119594 Pyridoxal 5'-phosphate biosynthesis none Chenopodium quinoa AUR62004561 R-CQI-8933784 AUR62004561 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62004570 R-CQI-8933759 AUR62004570 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62004633 R-CQI-9675481 AUR62004633 [cytosol] R-CQI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030654 Primary root development none Chenopodium quinoa AUR62004653 R-CQI-1125447 AUR62004653 [plastid stroma] R-CQI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119509 Histidine biosynthesis I none Chenopodium quinoa AUR62004685 R-CQI-5608213-2 AUR62004685 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62004687 R-CQI-1128319 AUR62004687 [cytosol] R-CQI-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119341 Galactosylcyclitol biosynthesis none Chenopodium quinoa AUR62004688 R-CQI-9626449 AUR62004688 [cytosol] R-CQI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9626305 Regulatory network of nutrient accumulation none Chenopodium quinoa AUR62004699 R-CQI-1130304 AUR62004699 [cytosol] R-CQI-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119291 Nitrate assimilation none Chenopodium quinoa AUR62005334 R-CQI-1128613-2 AUR62005334 [cytosol] R-CQI-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119316 Phenylpropanoid biosynthesis none Chenopodium quinoa AUR62005352 R-CQI-1125638-2 AUR62005352 [cytosol] R-CQI-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119516 Trehalose biosynthesis I none Chenopodium quinoa AUR62005384 R-CQI-1130327 AUR62005384 [cytosol] R-CQI-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119586 Cyanate degradation none Chenopodium quinoa AUR62005440 R-CQI-1126549-5 AUR62005440 [cytosol] R-CQI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119486 IAA biosynthesis I none Chenopodium quinoa AUR62005442 R-CQI-1126549-6 AUR62005442 [cytosol] R-CQI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119486 IAA biosynthesis I none Chenopodium quinoa AUR62005446 R-CQI-1130162 AUR62005446 [chloroplast] R-CQI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119494 Tryptophan biosynthesis none Chenopodium quinoa AUR62005447 R-CQI-1127753-2 AUR62005447 [cytosol] R-CQI-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119278 PRPP biosynthesis I none Chenopodium quinoa AUR62005448 R-CQI-8987548 AUR62005448 [peroxisomal matrix] R-CQI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119312 Photorespiration none Chenopodium quinoa AUR62005455 R-CQI-9658676-2 AUR62005455 [cytosol] R-CQI-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119567 Beta-alanine biosynthesis I none Chenopodium quinoa AUR62005465 R-CQI-1123430 AUR62005465 [cytosol] R-CQI-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119437 Glutathione redox reactions I none Chenopodium quinoa AUR62005484 R-CQI-4723690-2 AUR62005484 [plastid stroma] R-CQI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119464 Methylerythritol phosphate pathway none Chenopodium quinoa AUR62005495 R-CQI-1127353-3 AUR62005495 [cytosol] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62005532 R-CQI-4827081 AUR62005532 [plastid stroma] R-CQI-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-4827054 Tetrapyrrole biosynthesis I none Chenopodium quinoa AUR62005557 R-CQI-5632129-3 AUR62005557 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62005558 R-CQI-5632129-2 AUR62005558 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62005566 R-CQI-1122785-3 AUR62005566 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62005566 R-CQI-1126726-3 AUR62005566 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62005566 R-CQI-1122785-3 AUR62005566 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62005566 R-CQI-1126726-3 AUR62005566 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62005566 R-CQI-1122785-3 AUR62005566 [cytosol] R-CQI-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119570 Cytosolic glycolysis none Chenopodium quinoa AUR62005568 R-CQI-9645947 AUR62005568 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62005568 R-CQI-9645947 AUR62005568 [nucleoplasm] R-CQI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675782 Maturation none Chenopodium quinoa AUR62005568 R-CQI-9645947 AUR62005568 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62005568 R-CQI-9645947 AUR62005568 [nucleoplasm] R-CQI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675824 DNA replication Initiation none Chenopodium quinoa AUR62005568 R-CQI-9645947 AUR62005568 [nucleoplasm] R-CQI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675885 Lagging strand synthesis none Chenopodium quinoa AUR62005582 R-CQI-4752547-2 AUR62005582 [plastid stroma] R-CQI-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119498 Phylloquinone biosynthesis none Chenopodium quinoa AUR62005598 R-CQI-9675500-2 AUR62005598 [endoplasmic reticulum membrane] R-CQI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030654 Primary root development none Chenopodium quinoa AUR62005617 R-CQI-9638999-2 AUR62005617 [cytosol] R-CQI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119434 Phytic acid biosynthesis (lipid-independent) none Chenopodium quinoa AUR62005646 R-CQI-9646043 AUR62005646 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62005646 R-CQI-9646043 AUR62005646 [nucleoplasm] R-CQI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675782 Maturation none Chenopodium quinoa AUR62005646 R-CQI-9646043 AUR62005646 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62005646 R-CQI-9646043 AUR62005646 [nucleoplasm] R-CQI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675824 DNA replication Initiation none Chenopodium quinoa AUR62005646 R-CQI-9646043 AUR62005646 [nucleoplasm] R-CQI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675885 Lagging strand synthesis none Chenopodium quinoa AUR62005648 R-CQI-1130231 AUR62005648 [endoplasmic reticulum membrane] R-CQI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119325 Sphingolipid metabolism none Chenopodium quinoa AUR62005706 R-CQI-1126714 AUR62005706 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62005706 R-CQI-1126714 AUR62005706 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62005706 R-CQI-1126714 AUR62005706 [cytosol] R-CQI-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119295 Homoserine biosynthesis none Chenopodium quinoa AUR62005706 R-CQI-5606484 AUR62005706 [plastid stroma] R-CQI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119419 Lysine biosynthesis VI none Chenopodium quinoa AUR62005714 R-CQI-9930242 AUR62005714 [nucleoplasm] R-CQI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9766881 TF network involved in salinity response none Chenopodium quinoa AUR62005728 R-CQI-4752546 AUR62005728 [plastid stroma] R-CQI-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119498 Phylloquinone biosynthesis none Chenopodium quinoa AUR62005767 R-CQI-9640752 AUR62005767 [nucleoplasm] R-CQI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640882 Assembly of pre-replication complex none Chenopodium quinoa AUR62005767 R-CQI-9640752 AUR62005767 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62005768 R-CQI-9025463 AUR62005768 [endoplasmic reticulum membrane] R-CQI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119325 Sphingolipid metabolism none Chenopodium quinoa AUR62005821 R-CQI-9636827-2 AUR62005821 [nucleoplasm] R-CQI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9766881 TF network involved in salinity response none Chenopodium quinoa AUR62005828 R-CQI-5655076 AUR62005828 [Golgi lumen] R-CQI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5655101 Xyloglucan biosynthesis none Chenopodium quinoa AUR62005848 R-CQI-5655070-7 AUR62005848 [Golgi lumen] R-CQI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5655101 Xyloglucan biosynthesis none Chenopodium quinoa AUR62005967 R-CQI-1125926 AUR62005967 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62005967 R-CQI-1125926 AUR62005967 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62005967 R-CQI-1125926 AUR62005967 [cytosol] R-CQI-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119295 Homoserine biosynthesis none Chenopodium quinoa AUR62005967 R-CQI-5606498 AUR62005967 [plastid stroma] R-CQI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119419 Lysine biosynthesis VI none Chenopodium quinoa AUR62005995 R-CQI-8933784-3 AUR62005995 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62006009 R-CQI-9918210-4 granule-bound starch synthase 1 (GBSSI, or Waxy) [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62006009 R-CQI-9918222-4 AUR62006009 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62006009 R-CQI-9626344-4 AUR62006009 [plastid stroma] R-CQI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9626305 Regulatory network of nutrient accumulation none Chenopodium quinoa AUR62006040 R-CQI-9025699-3 AUR62006040 [plasma membrane] R-CQI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8858053 Polar auxin transport none Chenopodium quinoa AUR62006040 R-CQI-9025699-3 AUR62006040 [plasma membrane] R-CQI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025727 Iron uptake and transport in root vascular system none Chenopodium quinoa AUR62006041 R-CQI-9025699-8 AUR62006041 [plasma membrane] R-CQI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8858053 Polar auxin transport none Chenopodium quinoa AUR62006041 R-CQI-9025699-8 AUR62006041 [plasma membrane] R-CQI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025727 Iron uptake and transport in root vascular system none Chenopodium quinoa AUR62006085 R-CQI-1128586 AUR62006085 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62006114 R-CQI-1129859 AUR62006114 [chloroplast stroma] R-CQI-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119443 Ammonia assimilation cycle none Chenopodium quinoa AUR62006114 R-CQI-5606382 AUR62006114 [plastid stroma] R-CQI-1119535 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119535 Glutamate biosynthesis IV none Chenopodium quinoa AUR62006132 R-CQI-1123059-2 AUR62006132 [cytosol] R-CQI-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119317 Spermine biosynthesis none Chenopodium quinoa AUR62006132 R-CQI-1123059-2 AUR62006132 [cytosol] R-CQI-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119343 Spermidine biosynthesis none Chenopodium quinoa AUR62006141 R-CQI-9675426 AUR62006141 [nucleoplasm] R-CQI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030654 Primary root development none Chenopodium quinoa AUR62006172 R-CQI-9930216 ABI5 [nucleoplasm] R-CQI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9766881 TF network involved in salinity response none Chenopodium quinoa AUR62006182 R-CQI-2960790 AUR62006182 [cytosol] R-CQI-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119386 UDP-N-acetylgalactosamine biosynthesis none Chenopodium quinoa AUR62006182 R-CQI-2960790 AUR62006182 [cytosol] R-CQI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030654 Primary root development none Chenopodium quinoa AUR62006188 R-CQI-1125374 AUR62006188 [cytosol] R-CQI-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119586 Cyanate degradation none Chenopodium quinoa AUR62006255 R-CQI-1129169 AUR62006255 [plastid stroma] R-CQI-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119308 Momilactone biosynthesis none Chenopodium quinoa AUR62006271 R-CQI-9608693 AUR62006271 [cytosol] R-CQI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9608575 Reproductive meristem phase change none Chenopodium quinoa AUR62006318 R-CQI-1124234-2 AUR62006318 [cytosol] R-CQI-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119436 Peptidoglycan biosynthesis I none Chenopodium quinoa AUR62006331 R-CQI-1129539 AUR62006331 [cytosol] R-CQI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119610 Biotin biosynthesis II none Chenopodium quinoa AUR62006357 R-CQI-5655007 AUR62006357 [Golgi lumen] R-CQI-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5655010 Xylogalacturonan biosynthesis none Chenopodium quinoa AUR62006360 R-CQI-9918273 AUR62006360 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62006360 R-CQI-9626376 AUR62006360 [plastid stroma] R-CQI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9626305 Regulatory network of nutrient accumulation none Chenopodium quinoa AUR62006456 R-CQI-8868904-2 AUR62006456 [endoplasmic reticulum membrane] R-CQI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8868949 Intracellular auxin transport none Chenopodium quinoa AUR62006492 R-CQI-9675423 AUR62006492 [nucleoplasm] R-CQI-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675508 Root elongation none Chenopodium quinoa AUR62006492 R-CQI-9930290 MPK5 [nucleoplasm] R-CQI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9766881 TF network involved in salinity response none Chenopodium quinoa AUR62006503 R-CQI-9025513 AUR62006503 [endoplasmic reticulum membrane] R-CQI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119325 Sphingolipid metabolism none Chenopodium quinoa AUR62006503 R-CQI-1129700 AUR62006503 [cytosol] R-CQI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119610 Biotin biosynthesis II none Chenopodium quinoa AUR62006528 R-CQI-9611863-2 AUR62006528 [mitochondrial matrix] R-CQI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119479 Valine degradation none Chenopodium quinoa AUR62006545 R-CQI-9611465-2 AUR62006545 [nucleoplasm] R-CQI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Chenopodium quinoa AUR62006545 R-CQI-9611445-2 AUR62006545 [nucleoplasm] R-CQI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Chenopodium quinoa AUR62006553 R-CQI-1127373 AUR62006553 [cytosol] R-CQI-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119297 Beta-alanine biosynthesis III none Chenopodium quinoa AUR62006583 R-CQI-9675866-2 AUR62006583 [nucleoplasm] R-CQI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675782 Maturation none Chenopodium quinoa AUR62006583 R-CQI-9675866-2 AUR62006583 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62006583 R-CQI-9675866-2 AUR62006583 [nucleoplasm] R-CQI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675885 Lagging strand synthesis none Chenopodium quinoa AUR62006590 R-CQI-9608678 AUR62006590 [cytosol] R-CQI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9608575 Reproductive meristem phase change none Chenopodium quinoa AUR62006590 R-CQI-8986843 AUR62006590 [nucleoplasm] R-CQI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9608575 Reproductive meristem phase change none Chenopodium quinoa AUR62006601 R-CQI-9675272 AUR62006601 [plasma membrane] R-CQI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030654 Primary root development none Chenopodium quinoa AUR62006608 R-CQI-1127455 AUR62006608 [cytosol] R-CQI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119460 Isoleucine biosynthesis from threonine none Chenopodium quinoa AUR62006608 R-CQI-1127455 AUR62006608 [cytosol] R-CQI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119600 Valine biosynthesis none Chenopodium quinoa AUR62006618 R-CQI-9675280-2 AUR62006618 [nucleoplasm] R-CQI-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030680 Crown root development none Chenopodium quinoa AUR62006651 R-CQI-1129816 AUR62006651 [plastid stroma] R-CQI-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119367 Polyisoprenoid biosynthesis none Chenopodium quinoa AUR62006651 R-CQI-1129816 AUR62006651 [plastid stroma] R-CQI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119615 Mevalonate pathway none Chenopodium quinoa AUR62006668 R-CQI-8858112-2 AUR62006668 [plasma membrane] R-CQI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8858053 Polar auxin transport none Chenopodium quinoa AUR62006722 R-CQI-9681905-2 AUR62006722 [Golgi membrane] R-CQI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119574 UDP-L-arabinose biosynthesis and transport none Chenopodium quinoa AUR62006752 R-CQI-9025712 AUR62006752 [cytosol] R-CQI-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025754 Mugineic acid biosynthesis none Chenopodium quinoa AUR62006816 R-CQI-9612399 AUR62006816 [peroxisomal matrix] R-CQI-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119612 Cysteine degradation none Chenopodium quinoa AUR62006816 R-CQI-9612380 AUR62006816 [cytosol] R-CQI-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119612 Cysteine degradation none Chenopodium quinoa AUR62006827 R-CQI-5654756 AUR62006827 [cytosol] R-CQI-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119281 Aspartate biosynthesis I none Chenopodium quinoa AUR62006827 R-CQI-1123648 AUR62006827 [plastid] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62006827 R-CQI-5631992 AUR62006827 [plastid stroma] R-CQI-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119553 Asparagine biosynthesis none Chenopodium quinoa AUR62006833 R-CQI-8854445 AUR62006833 [cytosol] R-CQI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119276 Choline biosynthesis III none Chenopodium quinoa AUR62006845 R-CQI-9675807-2 AUR62006845 [nucleoplasm] R-CQI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675782 Maturation none Chenopodium quinoa AUR62006845 R-CQI-9675807-2 AUR62006845 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62006845 R-CQI-9675807-2 AUR62006845 [nucleoplasm] R-CQI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675885 Lagging strand synthesis none Chenopodium quinoa AUR62006871 R-CQI-6788234 AUR62006871 [cytosol] R-CQI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6788019 Salicylic acid signaling none Chenopodium quinoa AUR62006871 R-CQI-1124041 AUR62006871 [nucleoplasm] R-CQI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6788019 Salicylic acid signaling none Chenopodium quinoa AUR62006907 R-CQI-1126955-2 AUR62006907 [plastid] R-CQI-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119407 Ureide biosynthesis none Chenopodium quinoa AUR62006921 R-CQI-1129879-3 AUR62006921 [cytosol] R-CQI-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119436 Peptidoglycan biosynthesis I none Chenopodium quinoa AUR62006966 R-CQI-1122564 AUR62006966 [cytosol] R-CQI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119473 Cytokinins-O-glucoside biosynthesis none Chenopodium quinoa AUR62007018 R-CQI-1129880 AUR62007018 [chloroplast] R-CQI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119494 Tryptophan biosynthesis none Chenopodium quinoa AUR62007020 R-CQI-1128322-2 AUR62007020 [cytosol] R-CQI-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119384 NAD biosynthesis I (from aspartate) none Chenopodium quinoa AUR62007025 R-CQI-1124788-2 AUR62007025 [cytosol] R-CQI-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119601 Trehalose degradation II none Chenopodium quinoa AUR62007048 R-CQI-9025699-4 AUR62007048 [plasma membrane] R-CQI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8858053 Polar auxin transport none Chenopodium quinoa AUR62007048 R-CQI-9025699-4 AUR62007048 [plasma membrane] R-CQI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025727 Iron uptake and transport in root vascular system none Chenopodium quinoa AUR62007049 R-CQI-9025699-7 AUR62007049 [plasma membrane] R-CQI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8858053 Polar auxin transport none Chenopodium quinoa AUR62007049 R-CQI-9025699-7 AUR62007049 [plasma membrane] R-CQI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025727 Iron uptake and transport in root vascular system none Chenopodium quinoa AUR62007078 R-CQI-9918210-2 granule-bound starch synthase 1 (GBSSI, or Waxy) [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62007078 R-CQI-9918222-2 AUR62007078 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62007078 R-CQI-9626344-2 AUR62007078 [plastid stroma] R-CQI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9626305 Regulatory network of nutrient accumulation none Chenopodium quinoa AUR62007103 R-CQI-1127338-2 AUR62007103 [mitochondrial inner membrane] R-CQI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119402 Phospholipid biosynthesis I none Chenopodium quinoa AUR62007107 R-CQI-1124032-2 AUR62007107 [cytosol] R-CQI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119540 Leucine biosynthesis none Chenopodium quinoa AUR62007110 R-CQI-1125340 AUR62007110 [plastid stroma] R-CQI-1119274 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119274 Monoterpene biosynthesis none Chenopodium quinoa AUR62007110 R-CQI-1125340 AUR62007110 [plastid stroma] R-CQI-1119593 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119593 Oleoresin monoterpene volatiles biosynthesis none Chenopodium quinoa AUR62007136 R-CQI-1126053-2 AUR62007136 [mitochondrial matrix] R-CQI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119479 Valine degradation none Chenopodium quinoa AUR62007139 R-CQI-1129438 AUR62007139 [cytosol] R-CQI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119438 Secologanin and strictosidine biosynthesis none Chenopodium quinoa AUR62007167 R-CQI-9658589-2 AUR62007167 [endoplasmic reticulum lumen] R-CQI-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119502 Allantoin degradation none Chenopodium quinoa AUR62007193 R-CQI-8933728-3 AUR62007193 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62007204 R-CQI-1130181 AUR62007204 [plastid stroma] R-CQI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119430 Chorismate biosynthesis none Chenopodium quinoa AUR62007230 R-CQI-1123046-2 AUR62007230 [cytosol] R-CQI-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119386 UDP-N-acetylgalactosamine biosynthesis none Chenopodium quinoa AUR62007257 R-CQI-8987554-2 AUR62007257 [mitochondrial matrix] R-CQI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119312 Photorespiration none Chenopodium quinoa AUR62007282 R-CQI-5138481-2 AUR62007282 [plastid stroma] R-CQI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119263 Arginine biosynthesis none Chenopodium quinoa AUR62007282 R-CQI-5138481-2 AUR62007282 [plastid stroma] R-CQI-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119539 Ornithine biosynthesis none Chenopodium quinoa AUR62007294 R-CQI-6787119-2 AUR62007294 [nucleoplasm] R-CQI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6787011 Jasmonic acid signaling none Chenopodium quinoa AUR62007310 R-CQI-9638999-4 AUR62007310 [cytosol] R-CQI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119434 Phytic acid biosynthesis (lipid-independent) none Chenopodium quinoa AUR62007335 R-CQI-8854127-6 AUR62007335 [cytosol] R-CQI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119556 Choline biosynthesis I none Chenopodium quinoa AUR62007350 R-CQI-1129547 AUR62007350 [cytosol] R-CQI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119389 Phenylalanine biosynthesis I none Chenopodium quinoa AUR62007350 R-CQI-1129547 AUR62007350 [cytosol] R-CQI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119400 Methionine biosynthesis II none Chenopodium quinoa AUR62007350 R-CQI-1129547 AUR62007350 [cytosol] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62007353 R-CQI-1122783-2 AUR62007353 [chloroplast stroma] R-CQI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119402 Phospholipid biosynthesis I none Chenopodium quinoa AUR62007366 R-CQI-9924558 NCED1 [plastid] R-CQI-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Chenopodium quinoa AUR62007378 R-CQI-5149678 AUR62007378 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62007383 R-CQI-9639892-2 AUR62007383 [cell wall] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62007384 R-CQI-9639892-6 AUR62007384 [cell wall] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62007385 R-CQI-9639892-9 AUR62007385 [cell wall] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62007404 R-CQI-9618135-3 AUR62007404 [plasma membrane] R-CQI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9618218 Arsenic uptake and detoxification none Chenopodium quinoa AUR62007405 R-CQI-9618135-2 AUR62007405 [plasma membrane] R-CQI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9618218 Arsenic uptake and detoxification none Chenopodium quinoa AUR62007406 R-CQI-9025739 AUR62007406 [plasma membrane] R-CQI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025727 Iron uptake and transport in root vascular system none Chenopodium quinoa AUR62007406 R-CQI-9025739 AUR62007406 [plasma membrane] R-CQI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9618218 Arsenic uptake and detoxification none Chenopodium quinoa AUR62007406 R-CQI-9025739 AUR62007406 [plasma membrane] R-CQI-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639136 Response to Aluminum stress none Chenopodium quinoa AUR62007425 R-CQI-1124742-2 AUR62007425 [cytosol] R-CQI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119410 Ascorbate biosynthesis none Chenopodium quinoa AUR62007425 R-CQI-1124742-2 AUR62007425 [cytosol] R-CQI-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119570 Cytosolic glycolysis none Chenopodium quinoa AUR62007446 R-CQI-1126436 AUR62007446 [cytosol] R-CQI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119615 Mevalonate pathway none Chenopodium quinoa AUR62007474 R-CQI-1126888-4 AUR62007474 [cytosol] R-CQI-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119360 Fructan biosynthesis none Chenopodium quinoa AUR62007523 R-CQI-9658611 AUR62007523 [plastid stroma] R-CQI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119263 Arginine biosynthesis none Chenopodium quinoa AUR62007523 R-CQI-9658611 AUR62007523 [plastid stroma] R-CQI-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119539 Ornithine biosynthesis none Chenopodium quinoa AUR62007523 R-CQI-9658611 AUR62007523 [plastid stroma] R-CQI-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119622 Arginine biosynthesis II (acetyl cycle) none Chenopodium quinoa AUR62007530 R-CQI-5655075-2 AUR62007530 [Golgi lumen] R-CQI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5655101 Xyloglucan biosynthesis none Chenopodium quinoa AUR62007538 R-CQI-9035593-3 AUR62007538 [cytosol] R-CQI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9035605 Regulation of seed size none Chenopodium quinoa AUR62007538 R-CQI-9035634-3 AUR62007538 [nucleoplasm] R-CQI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9035605 Regulation of seed size none Chenopodium quinoa AUR62007538 R-CQI-9035593-3 AUR62007538 [cytosol] R-CQI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9608575 Reproductive meristem phase change none Chenopodium quinoa AUR62007538 R-CQI-9035634-3 AUR62007538 [nucleoplasm] R-CQI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9608575 Reproductive meristem phase change none Chenopodium quinoa AUR62007557 R-CQI-1123895-2 AUR62007557 [cytosol] R-CQI-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119334 Ethylene biosynthesis from methionine none Chenopodium quinoa AUR62007557 R-CQI-1123895-2 AUR62007557 [cytosol] R-CQI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119624 Methionine salvage pathway none Chenopodium quinoa AUR62007559 R-CQI-1129247-2 AUR62007559 [mitochondrial inner membrane] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62007573 R-CQI-1127815 AUR62007573 [cytosol] R-CQI-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119450 Homocysteine biosynthesis none Chenopodium quinoa AUR62007579 R-CQI-9916252 OsEGT1 [nucleoplasm] R-CQI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9916190 Root angle formation: elongation and curvature response none Chenopodium quinoa AUR62007584 R-CQI-9916124-3 OsPRX95 [extracellular region] R-CQI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119403 Removal of superoxide radicals none Chenopodium quinoa AUR62007584 R-CQI-9916124-3 OsPRX95 [extracellular region] R-CQI-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9607185 Generation of superoxide radicals none Chenopodium quinoa AUR62007610 R-CQI-9639957 AUR62007610 [plasma membrane] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62007646 R-CQI-1128613-3 AUR62007646 [cytosol] R-CQI-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119316 Phenylpropanoid biosynthesis none Chenopodium quinoa AUR62007673 R-CQI-9611889 AUR62007673 [mitochondrial matrix] R-CQI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119479 Valine degradation none Chenopodium quinoa AUR62007701 R-CQI-3240749-2 AUR62007701 [cytosol] R-CQI-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Chenopodium quinoa AUR62007701 R-CQI-9681918-2 AUR62007701 [cytosol] R-CQI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119574 UDP-L-arabinose biosynthesis and transport none Chenopodium quinoa AUR62007869 R-CQI-9675803 AUR62007869 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62007898 R-CQI-1129585 AUR62007898 [cytosol] R-CQI-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119265 Tetrahydrofolate biosynthesis I none Chenopodium quinoa AUR62007898 R-CQI-1129585 AUR62007898 [cytosol] R-CQI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119523 Tetrahydrofolate biosynthesis II none Chenopodium quinoa AUR62007936 R-CQI-9681886-4 AUR62007936 [cytosol] R-CQI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119574 UDP-L-arabinose biosynthesis and transport none Chenopodium quinoa AUR62007953 R-CQI-1125275-2 AUR62007953 [cytosol] R-CQI-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119629 Thiamine biosynthesis none Chenopodium quinoa AUR62007967 R-CQI-5083827 AUR62007967 [mitochondrial matrix] R-CQI-1119319 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119319 Alanine biosynthesis III none Chenopodium quinoa AUR62007967 R-CQI-5083827 AUR62007967 [mitochondrial matrix] R-CQI-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119612 Cysteine degradation none Chenopodium quinoa AUR62007978 R-CQI-1123757-2 AUR62007978 [cytosol] R-CQI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119460 Isoleucine biosynthesis from threonine none Chenopodium quinoa AUR62007978 R-CQI-1123757-2 AUR62007978 [cytosol] R-CQI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119473 Cytokinins-O-glucoside biosynthesis none Chenopodium quinoa AUR62007978 R-CQI-1123757-2 AUR62007978 [cytosol] R-CQI-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119496 Pantothenate biosynthesis I none Chenopodium quinoa AUR62007978 R-CQI-1123757-2 AUR62007978 [cytosol] R-CQI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119540 Leucine biosynthesis none Chenopodium quinoa AUR62007978 R-CQI-1123757-2 AUR62007978 [cytosol] R-CQI-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119544 Pantothenate biosynthesis II none Chenopodium quinoa AUR62007990 R-CQI-1122593 AUR62007990 [cytosol] R-CQI-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119436 Peptidoglycan biosynthesis I none Chenopodium quinoa AUR62007990 R-CQI-1122593 AUR62007990 [cytosol] R-CQI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119523 Tetrahydrofolate biosynthesis II none Chenopodium quinoa AUR62007990 R-CQI-1122593 AUR62007990 [cytosol] R-CQI-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119617 Folate polyglutamylation I none Chenopodium quinoa AUR62008017 R-CQI-9675274-3 AUR62008017 [nucleoplasm] R-CQI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030654 Primary root development none Chenopodium quinoa AUR62008039 R-CQI-9618171-2 AUR62008039 [plasma membrane] R-CQI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9618218 Arsenic uptake and detoxification none Chenopodium quinoa AUR62008056 R-CQI-9639789-2 AUR62008056 [plasma membrane] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62008146 R-CQI-9640698 AUR62008146 [nucleoplasm] R-CQI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640887 G1/S transition none Chenopodium quinoa AUR62008158 R-CQI-6787185 AUR62008158 [nucleoplasm] R-CQI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6787011 Jasmonic acid signaling none Chenopodium quinoa AUR62008169 R-CQI-1126549-3 AUR62008169 [cytosol] R-CQI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119486 IAA biosynthesis I none Chenopodium quinoa AUR62008192 R-CQI-1126238 AUR62008192 [chloroplast] R-CQI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119494 Tryptophan biosynthesis none Chenopodium quinoa AUR62008203 R-CQI-1127502 AUR62008203 [cytosol] R-CQI-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119394 Pantothenate and coenzyme A biosynthesis III none Chenopodium quinoa AUR62008212 R-CQI-1126916 AUR62008212 [plastid stroma] R-CQI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119464 Methylerythritol phosphate pathway none Chenopodium quinoa AUR62008223 R-CQI-9658681 AUR62008223 [plasma membrane] R-CQI-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119567 Beta-alanine biosynthesis I none Chenopodium quinoa AUR62008237 R-CQI-1128334 AUR62008237 [mitochondrial matrix] R-CQI-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119337 Proline degradation none Chenopodium quinoa AUR62008239 R-CQI-1125638-3 AUR62008239 [cytosol] R-CQI-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119516 Trehalose biosynthesis I none Chenopodium quinoa AUR62008284 R-CQI-1129514-2 AUR62008284 [chloroplast] R-CQI-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119579 Glycine betaine biosynthesis III none Chenopodium quinoa AUR62008285 R-CQI-1129514 AUR62008285 [chloroplast] R-CQI-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119579 Glycine betaine biosynthesis III none Chenopodium quinoa AUR62008298 R-CQI-6788036 AUR62008298 [cytosol] R-CQI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6788019 Salicylic acid signaling none Chenopodium quinoa AUR62008298 R-CQI-1126611 AUR62008298 [nucleoplasm] R-CQI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6788019 Salicylic acid signaling none Chenopodium quinoa AUR62008305 R-CQI-1125610-3 AUR62008305 [cytosol] R-CQI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119276 Choline biosynthesis III none Chenopodium quinoa AUR62008350 R-CQI-9826597-6 AUR62008350 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62008369 R-CQI-1124037-2 AUR62008369 [mitochondrial matrix] R-CQI-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119289 Arginine degradation none Chenopodium quinoa AUR62008423 R-CQI-1122261 AUR62008423 [plastid stroma] R-CQI-1119602 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119602 Phytyl-PP biosynthesis none Chenopodium quinoa AUR62008423 R-CQI-1122261 AUR62008423 [plastid stroma] R-CQI-1119605 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119605 Chlorophyll a biosynthesis II none Chenopodium quinoa AUR62008433 R-CQI-1123596 AUR62008433 [plastid stroma] R-CQI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119509 Histidine biosynthesis I none Chenopodium quinoa AUR62008438 R-CQI-9766876-2 AUR62008438 [nucleoplasm] R-CQI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9766881 TF network involved in salinity response none Chenopodium quinoa AUR62008438 R-CQI-9766876-2 AUR62008438 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62008442 R-CQI-1122934 AUR62008442 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62008459 R-CQI-8933833 AUR62008459 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62008459 R-CQI-8933833 AUR62008459 [nucleoplasm] R-CQI-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9928995 Drought escape (DE) via ABA-dependent pathway none Chenopodium quinoa AUR62008464 R-CQI-5655070-2 AUR62008464 [Golgi lumen] R-CQI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5655101 Xyloglucan biosynthesis none Chenopodium quinoa AUR62008465 R-CQI-5655070-5 AUR62008465 [Golgi lumen] R-CQI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5655101 Xyloglucan biosynthesis none Chenopodium quinoa AUR62008502 R-CQI-9681886 AUR62008502 [cytosol] R-CQI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119574 UDP-L-arabinose biosynthesis and transport none Chenopodium quinoa AUR62008515 R-CQI-1128178 AUR62008515 [cytosol] R-CQI-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119322 Leucodelphinidin biosynthesis none Chenopodium quinoa AUR62008515 R-CQI-1128178 AUR62008515 [cytosol] R-CQI-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Chenopodium quinoa AUR62008515 R-CQI-9609575 AUR62008515 [endoplasmic reticulum membrane] R-CQI-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9609573 Tricin biosynthesis none Chenopodium quinoa AUR62008537 R-CQI-9645944 AUR62008537 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62008552 R-CQI-9826682 AUR62008552 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62008578 R-CQI-8934069 AUR62008578 [nucleoplasm] R-CQI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8934036 Long day regulated expression of florigens none Chenopodium quinoa AUR62008578 R-CQI-8934069 AUR62008578 [nucleoplasm] R-CQI-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8934108 Short day regulated expression of florigens none Chenopodium quinoa AUR62008631 R-CQI-1125341 AUR62008631 [cytosol] R-CQI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119460 Isoleucine biosynthesis from threonine none Chenopodium quinoa AUR62008631 R-CQI-1125341 AUR62008631 [cytosol] R-CQI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119600 Valine biosynthesis none Chenopodium quinoa AUR62008699 R-CQI-1126115 AUR62008699 [cytosol] R-CQI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119452 Galactose degradation II none Chenopodium quinoa AUR62008699 R-CQI-1126115 AUR62008699 [cytosol] R-CQI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119465 Sucrose biosynthesis none Chenopodium quinoa AUR62008715 R-CQI-9675877-2 AUR62008715 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62008718 R-CQI-1126830 AUR62008718 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62008735 R-CQI-6788084 AUR62008735 [nucleoplasm] R-CQI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6788019 Salicylic acid signaling none Chenopodium quinoa AUR62008737 R-CQI-1123894 AUR62008737 [plasma membrane] R-CQI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119314 Cellulose biosynthesis none Chenopodium quinoa AUR62008783 R-CQI-1128528-2 AUR62008783 [plasma membrane] R-CQI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119314 Cellulose biosynthesis none Chenopodium quinoa AUR62008800 R-CQI-1128385-2 AUR62008800 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62008804 R-CQI-5655057-2 AUR62008804 [Golgi lumen] R-CQI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5655101 Xyloglucan biosynthesis none Chenopodium quinoa AUR62008810 R-CQI-1122881-2 AUR62008810 [cytosol] R-CQI-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Chenopodium quinoa AUR62008810 R-CQI-1122881-2 AUR62008810 [cytosol] R-CQI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119438 Secologanin and strictosidine biosynthesis none Chenopodium quinoa AUR62008810 R-CQI-1122881-2 AUR62008810 [cytosol] R-CQI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119486 IAA biosynthesis I none Chenopodium quinoa AUR62008824 R-CQI-1128327-2 AUR62008824 [cytosol] R-CQI-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119267 Phenylalanine degradation III none Chenopodium quinoa AUR62008872 R-CQI-3240748-2 AUR62008872 [cytosol] R-CQI-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Chenopodium quinoa AUR62008875 R-CQI-1126091-2 AUR62008875 [cytosol] R-CQI-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119394 Pantothenate and coenzyme A biosynthesis III none Chenopodium quinoa AUR62008875 R-CQI-1126091-2 AUR62008875 [cytosol] R-CQI-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119496 Pantothenate biosynthesis I none Chenopodium quinoa AUR62008875 R-CQI-1126091-2 AUR62008875 [cytosol] R-CQI-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119544 Pantothenate biosynthesis II none Chenopodium quinoa AUR62008875 R-CQI-1126091-2 AUR62008875 [cytosol] R-CQI-1119568 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119568 Pantothenate biosynthesis III none Chenopodium quinoa AUR62008909 R-CQI-9640789-2 AUR62008909 [nucleoplasm] R-CQI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640760 G1 phase none Chenopodium quinoa AUR62008924 R-CQI-3315084-2 AUR62008924 [cytosol] R-CQI-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119342 Gamma-glutamyl cycle none Chenopodium quinoa AUR62008934 R-CQI-1123745-3 AUR62008934 [endoplasmic reticulum membrane] R-CQI-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119260 Cardiolipin biosynthesis none Chenopodium quinoa AUR62008934 R-CQI-1123745-3 AUR62008934 [endoplasmic reticulum membrane] R-CQI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119402 Phospholipid biosynthesis I none Chenopodium quinoa AUR62008941 R-CQI-1126400 AUR62008941 [chloroplast] R-CQI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119494 Tryptophan biosynthesis none Chenopodium quinoa AUR62008962 R-CQI-1123161-4 AUR62008962 [chloroplast] R-CQI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119494 Tryptophan biosynthesis none Chenopodium quinoa AUR62008963 R-CQI-1127526-2 AUR62008963 [cytosol] R-CQI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119332 Jasmonic acid biosynthesis none Chenopodium quinoa AUR62008976 R-CQI-5632238 AUR62008976 [cytosol] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62008976 R-CQI-5632238 AUR62008976 [cytosol] R-CQI-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8934257 Transition from vegetative to reproductive shoot apical meristem none Chenopodium quinoa AUR62008976 R-CQI-9927894 AUR62008976 [nucleoplasm] R-CQI-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8934257 Transition from vegetative to reproductive shoot apical meristem none Chenopodium quinoa AUR62008976 R-CQI-5632238 AUR62008976 [cytosol] R-CQI-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9609102 Flower development none Chenopodium quinoa AUR62008976 R-CQI-5632238 AUR62008976 [cytosol] R-CQI-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9928831 Severe drought none Chenopodium quinoa AUR62008976 R-CQI-9927894 AUR62008976 [nucleoplasm] R-CQI-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9928831 Severe drought none Chenopodium quinoa AUR62008988 R-CQI-2730728 AUR62008988 [cytosol] R-CQI-1119413 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119413 Trans-zeatin biosynthesis none Chenopodium quinoa AUR62008991 R-CQI-8987531-6 AUR62008991 [chloroplast] R-CQI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119312 Photorespiration none Chenopodium quinoa AUR62008991 R-CQI-1125951-6 AUR62008991 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62008993 R-CQI-8987531-3 AUR62008993 [chloroplast] R-CQI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119312 Photorespiration none Chenopodium quinoa AUR62008993 R-CQI-1125951-2 AUR62008993 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62008994 R-CQI-8987531-2 AUR62008994 [chloroplast] R-CQI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119312 Photorespiration none Chenopodium quinoa AUR62008994 R-CQI-1125951 AUR62008994 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62009004 R-CQI-1126531 AUR62009004 [cytosol] R-CQI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119410 Ascorbate biosynthesis none Chenopodium quinoa AUR62009004 R-CQI-1126531 AUR62009004 [cytosol] R-CQI-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119628 GDP-mannose metabolism none Chenopodium quinoa AUR62009043 R-CQI-9645872-3 AUR62009043 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62009125 R-CQI-5367743-2 AUR62009125 [cytosol] R-CQI-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5367729 Strigolactone biosynthesis none Chenopodium quinoa AUR62009129 R-CQI-1123059-3 AUR62009129 [cytosol] R-CQI-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119317 Spermine biosynthesis none Chenopodium quinoa AUR62009129 R-CQI-1123059-3 AUR62009129 [cytosol] R-CQI-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119343 Spermidine biosynthesis none Chenopodium quinoa AUR62009132 R-CQI-5679401-2 AUR62009132 [nucleoplasm] R-CQI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5679411 Gibberellin signaling none Chenopodium quinoa AUR62009150 R-CQI-8987557 AUR62009150 [mitochondrial matrix] R-CQI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119312 Photorespiration none Chenopodium quinoa AUR62009166 R-CQI-5632264 AUR62009166 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62009263 R-CQI-5138489 AUR62009263 [plastid stroma] R-CQI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119263 Arginine biosynthesis none Chenopodium quinoa AUR62009263 R-CQI-1127893 AUR62009263 [cytosol] R-CQI-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119444 Canavanine biosynthesis none Chenopodium quinoa AUR62009263 R-CQI-5138489 AUR62009263 [plastid stroma] R-CQI-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119622 Arginine biosynthesis II (acetyl cycle) none Chenopodium quinoa AUR62009263 R-CQI-5138489 AUR62009263 [plastid stroma] R-CQI-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5633340 Citrulline-nitric oxide cycle none Chenopodium quinoa AUR62009269 R-CQI-9025500-2 AUR62009269 [endoplasmic reticulum membrane] R-CQI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119325 Sphingolipid metabolism none Chenopodium quinoa AUR62009284 R-CQI-5367761 AUR62009284 [plastid stroma] R-CQI-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5367729 Strigolactone biosynthesis none Chenopodium quinoa AUR62009285 R-CQI-1123161 AUR62009285 [chloroplast] R-CQI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119494 Tryptophan biosynthesis none Chenopodium quinoa AUR62009294 R-CQI-1127527-2 AUR62009294 [cytosol] R-CQI-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Chenopodium quinoa AUR62009304 R-CQI-5654957 AUR62009304 [Golgi lumen] R-CQI-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5654909 Xylan biosynthesis none Chenopodium quinoa AUR62009324 R-CQI-1125734 AUR62009324 [cytosol] R-CQI-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119281 Aspartate biosynthesis I none Chenopodium quinoa AUR62009324 R-CQI-5632000 AUR62009324 [plastid stroma] R-CQI-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119553 Asparagine biosynthesis none Chenopodium quinoa AUR62009350 R-CQI-1124809 AUR62009350 [cytosol] R-CQI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119486 IAA biosynthesis I none Chenopodium quinoa AUR62009362 R-CQI-1128054 AUR62009362 [mitochondrial matrix] R-CQI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119479 Valine degradation none Chenopodium quinoa AUR62009366 R-CQI-1130344 AUR62009366 [cytosol] R-CQI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119389 Phenylalanine biosynthesis I none Chenopodium quinoa AUR62009384 R-CQI-9639088 AUR62009384 [plasma membrane] R-CQI-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639136 Response to Aluminum stress none Chenopodium quinoa AUR62009386 R-CQI-1123087-2 AUR62009386 [plasma membrane] R-CQI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119314 Cellulose biosynthesis none Chenopodium quinoa AUR62009389 R-CQI-9609343 AUR62009389 [cytosol] R-CQI-9609352 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9609352 Lycopene catabolism none Chenopodium quinoa AUR62009400 R-CQI-1126307 AUR62009400 [cytosol] R-CQI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119370 Sterol biosynthesis none Chenopodium quinoa AUR62009440 R-CQI-8934168 AUR62009440 [nucleoplasm] R-CQI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8934036 Long day regulated expression of florigens none Chenopodium quinoa AUR62009440 R-CQI-8934168 AUR62009440 [nucleoplasm] R-CQI-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8934108 Short day regulated expression of florigens none Chenopodium quinoa AUR62009440 R-CQI-9920270 AUR62009440 [nucleoplasm] R-CQI-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8934108 Short day regulated expression of florigens none Chenopodium quinoa AUR62009440 R-CQI-8934168 AUR62009440 [nucleoplasm] R-CQI-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9928946 Drought escape (DE) via ABA-independent pathway none Chenopodium quinoa AUR62009489 R-CQI-9681910-2 AUR62009489 [Golgi membrane] R-CQI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119574 UDP-L-arabinose biosynthesis and transport none Chenopodium quinoa AUR62009518 R-CQI-1127414 AUR62009518 [cytosol] R-CQI-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119265 Tetrahydrofolate biosynthesis I none Chenopodium quinoa AUR62009525 R-CQI-5608102-2 AUR62009525 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62009525 R-CQI-1123690 AUR62009525 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62009565 R-CQI-9684723-2 AUR62009565 [cytosol] R-CQI-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9609102 Flower development none Chenopodium quinoa AUR62009567 R-CQI-9611477-2 phospho-phosphorylated-RLCK176 [cytosol] R-CQI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Chenopodium quinoa AUR62009568 R-CQI-5149632 AUR62009568 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62009578 R-CQI-1129438-2 AUR62009578 [cytosol] R-CQI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119438 Secologanin and strictosidine biosynthesis none Chenopodium quinoa AUR62009592 R-CQI-9611544 SPL11 [nucleoplasm] R-CQI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Chenopodium quinoa AUR62009592 R-CQI-9611440 phospho-phosphorylated-SPL11 [nucleoplasm] R-CQI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Chenopodium quinoa AUR62009608 R-CQI-9640777-2 AUR62009608 [nucleoplasm] R-CQI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640760 G1 phase none Chenopodium quinoa AUR62009608 R-CQI-9640777-2 AUR62009608 [nucleoplasm] R-CQI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640887 G1/S transition none Chenopodium quinoa AUR62009631 R-CQI-1126172 AUR62009631 [cytosol] R-CQI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119379 Flavin biosynthesis none Chenopodium quinoa AUR62009659 R-CQI-9639874 AUR62009659 [plasma membrane] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62009710 R-CQI-6786908 AUR62009710 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62009710 R-CQI-9826697-2 AUR62009710 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62009724 R-CQI-9675399 AUR62009724 [nucleoplasm] R-CQI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030654 Primary root development none Chenopodium quinoa AUR62009735 R-CQI-1127076 AUR62009735 [cytosol] R-CQI-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119418 Suberin biosynthesis none Chenopodium quinoa AUR62009735 R-CQI-1127076 AUR62009735 [cytosol] R-CQI-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119582 Phenylpropanoid biosynthesis, initial reactions none Chenopodium quinoa AUR62009748 R-CQI-1127065-2 AUR62009748 [cytosol] R-CQI-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119304 Putrescine biosynthesis II none Chenopodium quinoa AUR62009764 R-CQI-6787863 AUR62009764 [nucleoplasm] R-CQI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6788019 Salicylic acid signaling none Chenopodium quinoa AUR62009771 R-CQI-9608694-2 AUR62009771 [cytosol] R-CQI-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9928831 Severe drought none Chenopodium quinoa AUR62009771 R-CQI-9928774-2 AUR62009771 [nucleoplasm] R-CQI-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9928831 Severe drought none Chenopodium quinoa AUR62009812 R-CQI-1124786 AUR62009812 [cytosol] R-CQI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119276 Choline biosynthesis III none Chenopodium quinoa AUR62009820 R-CQI-1124285 AUR62009820 [cytosol] R-CQI-1119284 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119284 Coumarin biosynthesis (via 2-coumarate) none Chenopodium quinoa AUR62009831 R-CQI-5679376 AUR62009831 [nucleoplasm] R-CQI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5679411 Gibberellin signaling none Chenopodium quinoa AUR62009902 R-CQI-1123433-2 AUR62009902 [cytosol] R-CQI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119332 Jasmonic acid biosynthesis none Chenopodium quinoa AUR62009902 R-CQI-1123433-2 AUR62009902 [cytosol] R-CQI-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119618 13-LOX and 13-HPL pathway none Chenopodium quinoa AUR62009904 R-CQI-1124813 AUR62009904 [mitochondrial matrix] R-CQI-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119337 Proline degradation none Chenopodium quinoa AUR62009904 R-CQI-8986570 AUR62009904 [mitochondrial matrix] R-CQI-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119365 Lysine degradation II none Chenopodium quinoa AUR62009904 R-CQI-9658682 AUR62009904 [cytosol] R-CQI-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119567 Beta-alanine biosynthesis I none Chenopodium quinoa AUR62009924 R-CQI-8987499-2 AUR62009924 [peroxisomal matrix] R-CQI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119312 Photorespiration none Chenopodium quinoa AUR62009924 R-CQI-1130222-2 AUR62009924 [cytosol] R-CQI-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119596 Glutamate biosynthesis I none Chenopodium quinoa AUR62009948 R-CQI-9928801 AUR62009948 [nucleoplasm] R-CQI-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9928995 Drought escape (DE) via ABA-dependent pathway none Chenopodium quinoa AUR62011286 R-CQI-4788601-3 AUR62011286 [plastid stroma] R-CQI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119509 Histidine biosynthesis I none Chenopodium quinoa AUR62011292 R-CQI-1127738-2 AUR62011292 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62011292 R-CQI-1127738-2 AUR62011292 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62011292 R-CQI-5606514-2 AUR62011292 [plastid stroma] R-CQI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119419 Lysine biosynthesis VI none Chenopodium quinoa AUR62011293 R-CQI-1125417-3 AUR62011293 [cytosol] R-CQI-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119265 Tetrahydrofolate biosynthesis I none Chenopodium quinoa AUR62011293 R-CQI-1125417-3 AUR62011293 [cytosol] R-CQI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119523 Tetrahydrofolate biosynthesis II none Chenopodium quinoa AUR62011298 R-CQI-1127562-2 AUR62011298 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62011298 R-CQI-1130466-2 AUR62011298 [cytosol] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62011302 R-CQI-1123717-6 AUR62011302 [cytosol] R-CQI-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119395 Maackiain biosynthesis none Chenopodium quinoa AUR62011302 R-CQI-1123717-6 AUR62011302 [cytosol] R-CQI-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119453 Medicarpin biosynthesis none Chenopodium quinoa AUR62011335 R-CQI-1129818-5 AUR62011335 [mitochondrial matrix] R-CQI-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119365 Lysine degradation II none Chenopodium quinoa AUR62011335 R-CQI-1173242-5 AUR62011335 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62011357 R-CQI-9675274-4 AUR62011357 [nucleoplasm] R-CQI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030654 Primary root development none Chenopodium quinoa AUR62011359 R-CQI-1129208-3 AUR62011359 [chloroplast envelope] R-CQI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119402 Phospholipid biosynthesis I none Chenopodium quinoa AUR62011363 R-CQI-1128745 AUR62011363 [plastid stroma] R-CQI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119464 Methylerythritol phosphate pathway none Chenopodium quinoa AUR62011407 R-CQI-1124613-2 AUR62011407 [plasma membrane] R-CQI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119314 Cellulose biosynthesis none Chenopodium quinoa AUR62011423 R-CQI-4415007-4 AUR62011423 [cytosol] R-CQI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-3899351 Abscisic acid (ABA) mediated signaling none Chenopodium quinoa AUR62011423 R-CQI-4415016-4 phospho-AUR62011423 [cytosol] R-CQI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-3899351 Abscisic acid (ABA) mediated signaling none Chenopodium quinoa AUR62011423 R-CQI-4415007-4 AUR62011423 [cytosol] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62011453 R-CQI-5138505-2 AUR62011453 [plastid stroma] R-CQI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119263 Arginine biosynthesis none Chenopodium quinoa AUR62011453 R-CQI-5138505-2 AUR62011453 [plastid stroma] R-CQI-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119539 Ornithine biosynthesis none Chenopodium quinoa AUR62011453 R-CQI-5138505-2 AUR62011453 [plastid stroma] R-CQI-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119622 Arginine biosynthesis II (acetyl cycle) none Chenopodium quinoa AUR62011475 R-CQI-5632157 AUR62011475 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62011475 R-CQI-5632157 AUR62011475 [nucleoplasm] R-CQI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5654828 Strigolactone signaling none Chenopodium quinoa AUR62011496 R-CQI-1126860 AUR62011496 [cytosol] R-CQI-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119321 Glycerol degradation I none Chenopodium quinoa AUR62011529 R-CQI-1125906-3 AUR62011529 [cytosol] R-CQI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119276 Choline biosynthesis III none Chenopodium quinoa AUR62011552 R-CQI-1129055 AUR62011552 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62011604 R-CQI-8987467 AUR62011604 [chloroplast] R-CQI-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119502 Allantoin degradation none Chenopodium quinoa AUR62011729 R-CQI-5606478-2 AUR62011729 [plastid stroma] R-CQI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119419 Lysine biosynthesis VI none Chenopodium quinoa AUR62011730 R-CQI-1128366-2 AUR62011730 [cytosol] R-CQI-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119334 Ethylene biosynthesis from methionine none Chenopodium quinoa AUR62011730 R-CQI-1128366-2 AUR62011730 [cytosol] R-CQI-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119501 S-adenosyl-L-methionine cycle none Chenopodium quinoa AUR62011730 R-CQI-1128366-2 AUR62011730 [cytosol] R-CQI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119624 Methionine salvage pathway none Chenopodium quinoa AUR62011730 R-CQI-9025738-2 AUR62011730 [cytosol] R-CQI-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025754 Mugineic acid biosynthesis none Chenopodium quinoa AUR62011814 R-CQI-9640745-2 AUR62011814 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62011814 R-CQI-9640745-2 AUR62011814 [nucleoplasm] R-CQI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675824 DNA replication Initiation none Chenopodium quinoa AUR62011880 R-CQI-1125910-3 AUR62011880 [plastid stroma] R-CQI-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119367 Polyisoprenoid biosynthesis none Chenopodium quinoa AUR62011907 R-CQI-6787066-2 AUR62011907 [nucleoplasm] R-CQI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6787011 Jasmonic acid signaling none Chenopodium quinoa AUR62011908 R-CQI-6787066-3 AUR62011908 [nucleoplasm] R-CQI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6787011 Jasmonic acid signaling none Chenopodium quinoa AUR62011937 R-CQI-1127299 AUR62011937 [cytosol] R-CQI-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119298 Glutathione redox reactions II none Chenopodium quinoa AUR62011937 R-CQI-1127299 AUR62011937 [cytosol] R-CQI-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119437 Glutathione redox reactions I none Chenopodium quinoa AUR62011942 R-CQI-1122892 AUR62011942 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62011942 R-CQI-1122892 AUR62011942 [nucleoplasm] R-CQI-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030557 Lateral root initiation none Chenopodium quinoa AUR62011942 R-CQI-1122892 AUR62011942 [nucleoplasm] R-CQI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030654 Primary root development none Chenopodium quinoa AUR62011946 R-CQI-1123404 AUR62011946 [peroxisomal matrix] R-CQI-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119407 Ureide biosynthesis none Chenopodium quinoa AUR62011950 R-CQI-1129781 AUR62011950 [chloroplast] R-CQI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119494 Tryptophan biosynthesis none Chenopodium quinoa AUR62011962 R-CQI-3321270 AUR62011962 [chloroplast inner membrane] R-CQI-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119287 Vitamin E biosynthesis none Chenopodium quinoa AUR62011972 R-CQI-8934084 AUR62011972 [nucleoplasm] R-CQI-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9928995 Drought escape (DE) via ABA-dependent pathway none Chenopodium quinoa AUR62011973 R-CQI-9924379-2 HSFA2D [nucleoplasm] R-CQI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924451 Shoot (tiller) formation and regulation of tiller angle none Chenopodium quinoa AUR62011991 R-CQI-1128594 AUR62011991 [cytosol] R-CQI-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119349 S-methylmethionine cycle none Chenopodium quinoa AUR62011991 R-CQI-1128594 AUR62011991 [cytosol] R-CQI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119400 Methionine biosynthesis II none Chenopodium quinoa AUR62012036 R-CQI-9675876 AUR62012036 [nucleoplasm] R-CQI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675782 Maturation none Chenopodium quinoa AUR62012036 R-CQI-9675876 AUR62012036 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62012036 R-CQI-9675876 AUR62012036 [nucleoplasm] R-CQI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675885 Lagging strand synthesis none Chenopodium quinoa AUR62012037 R-CQI-1124598-2 AUR62012037 [cytosol] R-CQI-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119300 Glycolipid desaturation none Chenopodium quinoa AUR62012061 R-CQI-9030976 AUR62012061 [nucleoplasm] R-CQI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5654828 Strigolactone signaling none Chenopodium quinoa AUR62012061 R-CQI-9030976 AUR62012061 [nucleoplasm] R-CQI-9030908 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030908 Underwater shoot and internode elongation none Chenopodium quinoa AUR62012061 R-CQI-9030976 AUR62012061 [nucleoplasm] R-CQI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9035605 Regulation of seed size none Chenopodium quinoa AUR62012061 R-CQI-9035631 AUR62012061 [cytosol] R-CQI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9035605 Regulation of seed size none Chenopodium quinoa AUR62012061 R-CQI-9030976 AUR62012061 [nucleoplasm] R-CQI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9608575 Reproductive meristem phase change none Chenopodium quinoa AUR62012061 R-CQI-9035631 AUR62012061 [cytosol] R-CQI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9608575 Reproductive meristem phase change none Chenopodium quinoa AUR62012061 R-CQI-9608743 AUR62012061 [cytosol] R-CQI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9608575 Reproductive meristem phase change none Chenopodium quinoa AUR62012061 R-CQI-9608705 AUR62012061 [nucleoplasm] R-CQI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9608575 Reproductive meristem phase change none Chenopodium quinoa AUR62012876 R-CQI-3230566-2 AUR62012876 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62012882 R-CQI-2685732-2 AUR62012882 [cytosol] R-CQI-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119580 IAA biosynthesis II none Chenopodium quinoa AUR62012883 R-CQI-1123575 AUR62012883 [cytosol] R-CQI-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119297 Beta-alanine biosynthesis III none Chenopodium quinoa AUR62012892 R-CQI-1128980 AUR62012892 [cytosol] R-CQI-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119586 Cyanate degradation none Chenopodium quinoa AUR62012933 R-CQI-1130141-2 AUR62012933 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62012933 R-CQI-1130141-2 AUR62012933 [mitochondrial matrix] R-CQI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119540 Leucine biosynthesis none Chenopodium quinoa AUR62012940 R-CQI-1125494 AUR62012940 [endoplasmic reticulum membrane] R-CQI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119402 Phospholipid biosynthesis I none Chenopodium quinoa AUR62012942 R-CQI-1127357 AUR62012942 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62012942 R-CQI-1127357 AUR62012942 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62012945 R-CQI-5632232-4 phospho-AUR62012945 [plasma membrane] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62012954 R-CQI-9924417-5 SAUR39 [cytosol] R-CQI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924451 Shoot (tiller) formation and regulation of tiller angle none Chenopodium quinoa AUR62012955 R-CQI-9924417-12 SAUR39 [cytosol] R-CQI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924451 Shoot (tiller) formation and regulation of tiller angle none Chenopodium quinoa AUR62012956 R-CQI-9924417-9 SAUR39 [cytosol] R-CQI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924451 Shoot (tiller) formation and regulation of tiller angle none Chenopodium quinoa AUR62012957 R-CQI-9924417-15 SAUR39 [cytosol] R-CQI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924451 Shoot (tiller) formation and regulation of tiller angle none Chenopodium quinoa AUR62012958 R-CQI-9924417-8 SAUR39 [cytosol] R-CQI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924451 Shoot (tiller) formation and regulation of tiller angle none Chenopodium quinoa AUR62012959 R-CQI-9924417-2 SAUR39 [cytosol] R-CQI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924451 Shoot (tiller) formation and regulation of tiller angle none Chenopodium quinoa AUR62012960 R-CQI-9924417-10 SAUR39 [cytosol] R-CQI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924451 Shoot (tiller) formation and regulation of tiller angle none Chenopodium quinoa AUR62012961 R-CQI-9924417-13 SAUR39 [cytosol] R-CQI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924451 Shoot (tiller) formation and regulation of tiller angle none Chenopodium quinoa AUR62012962 R-CQI-9924417-11 SAUR39 [cytosol] R-CQI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924451 Shoot (tiller) formation and regulation of tiller angle none Chenopodium quinoa AUR62012963 R-CQI-9924417-4 SAUR39 [cytosol] R-CQI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924451 Shoot (tiller) formation and regulation of tiller angle none Chenopodium quinoa AUR62012964 R-CQI-9924417-7 SAUR39 [cytosol] R-CQI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924451 Shoot (tiller) formation and regulation of tiller angle none Chenopodium quinoa AUR62012965 R-CQI-9924417-6 SAUR39 [cytosol] R-CQI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924451 Shoot (tiller) formation and regulation of tiller angle none Chenopodium quinoa AUR62012966 R-CQI-9924417 SAUR39 [cytosol] R-CQI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924451 Shoot (tiller) formation and regulation of tiller angle none Chenopodium quinoa AUR62012967 R-CQI-9924417-14 SAUR39 [cytosol] R-CQI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924451 Shoot (tiller) formation and regulation of tiller angle none Chenopodium quinoa AUR62012968 R-CQI-9924417-3 SAUR39 [cytosol] R-CQI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924451 Shoot (tiller) formation and regulation of tiller angle none Chenopodium quinoa AUR62013024 R-CQI-9618156 AUR62013024 [plasma membrane] R-CQI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9618218 Arsenic uptake and detoxification none Chenopodium quinoa AUR62013028 R-CQI-8987448 AUR62013028 [peroxisomal matrix] R-CQI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119312 Photorespiration none Chenopodium quinoa AUR62013038 R-CQI-9645954 AUR62013038 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62013045 R-CQI-1123786 AUR62013045 R-CQI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119403 Removal of superoxide radicals none Chenopodium quinoa AUR62013094 R-CQI-1128877 AUR62013094 [plastid stroma] R-CQI-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119424 Plastid glycolysis none Chenopodium quinoa AUR62013094 R-CQI-1128877 AUR62013094 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62013103 R-CQI-1123561 AUR62013103 [cytosol] R-CQI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119624 Methionine salvage pathway none Chenopodium quinoa AUR62013155 R-CQI-1125832 AUR62013155 [plastid stroma] R-CQI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119430 Chorismate biosynthesis none Chenopodium quinoa AUR62013157 R-CQI-9682527-2 AUR62013157 [cytosol] R-CQI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119410 Ascorbate biosynthesis none Chenopodium quinoa AUR62013159 R-CQI-1122295 AUR62013159 [cytosol] R-CQI-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119353 Linear furanocoumarin biosynthesis none Chenopodium quinoa AUR62013165 R-CQI-1128950 AUR62013165 [cytosol] R-CQI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119379 Flavin biosynthesis none Chenopodium quinoa AUR62013177 R-CQI-1125974 AUR62013177 [cytosol] R-CQI-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119262 Threonine biosynthesis from homoserine none Chenopodium quinoa AUR62013177 R-CQI-1125974 AUR62013177 [cytosol] R-CQI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119400 Methionine biosynthesis II none Chenopodium quinoa AUR62013181 R-CQI-5221147 AUR62013181 [cytosol] R-CQI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-3899351 Abscisic acid (ABA) mediated signaling none Chenopodium quinoa AUR62013187 R-CQI-1130152 AUR62013187 [cytosol] R-CQI-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119394 Pantothenate and coenzyme A biosynthesis III none Chenopodium quinoa AUR62013199 R-CQI-1124496-2 AUR62013199 [cytosol] R-CQI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119615 Mevalonate pathway none Chenopodium quinoa AUR62013218 R-CQI-1124949 AUR62013218 [plastid stroma] R-CQI-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119308 Momilactone biosynthesis none Chenopodium quinoa AUR62013218 R-CQI-1124949 AUR62013218 [plastid stroma] R-CQI-1119328 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119328 Oleoresin sesquiterpene volatiles biosynthesis none Chenopodium quinoa AUR62013218 R-CQI-1129421 AUR62013218 [chloroplast] R-CQI-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119348 Ent-kaurene biosynthesis none Chenopodium quinoa AUR62013218 R-CQI-1124949 AUR62013218 [plastid stroma] R-CQI-1119371 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119371 Oryzalexin A-F biosynthesis none Chenopodium quinoa AUR62013218 R-CQI-1124949 AUR62013218 [plastid stroma] R-CQI-1119521 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119521 Oryzalexin S biosynthesis none Chenopodium quinoa AUR62013218 R-CQI-1129220 AUR62013218 [cytosol] R-CQI-1119583 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119583 Phytocassane biosynthesis none Chenopodium quinoa AUR62013218 R-CQI-9610718 AUR62013218 [plastid stroma] R-CQI-9610720 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9610720 Oryzalide A biosynthesis none Chenopodium quinoa AUR62013251 R-CQI-9640671-2 AUR62013251 [nucleoplasm] R-CQI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640760 G1 phase none Chenopodium quinoa AUR62013251 R-CQI-9640671-2 AUR62013251 [nucleoplasm] R-CQI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640887 G1/S transition none Chenopodium quinoa AUR62013294 R-CQI-1127574 AUR62013294 [cytosol] R-CQI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119465 Sucrose biosynthesis none Chenopodium quinoa AUR62013298 R-CQI-5655005 AUR62013298 [Golgi lumen] R-CQI-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5655010 Xylogalacturonan biosynthesis none Chenopodium quinoa AUR62013299 R-CQI-5655005-2 AUR62013299 [Golgi lumen] R-CQI-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5655010 Xylogalacturonan biosynthesis none Chenopodium quinoa AUR62013350 R-CQI-1125906-2 AUR62013350 [cytosol] R-CQI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119276 Choline biosynthesis III none Chenopodium quinoa AUR62013355 R-CQI-1130327-3 AUR62013355 [cytosol] R-CQI-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119586 Cyanate degradation none Chenopodium quinoa AUR62013367 R-CQI-9681915 AUR62013367 [Golgi membrane] R-CQI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119574 UDP-L-arabinose biosynthesis and transport none Chenopodium quinoa AUR62013424 R-CQI-9645941 AUR62013424 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62013440 R-CQI-3240749 AUR62013440 [cytosol] R-CQI-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Chenopodium quinoa AUR62013440 R-CQI-9681918 AUR62013440 [cytosol] R-CQI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119574 UDP-L-arabinose biosynthesis and transport none Chenopodium quinoa AUR62013461 R-CQI-9611889-4 AUR62013461 [mitochondrial matrix] R-CQI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119479 Valine degradation none Chenopodium quinoa AUR62013484 R-CQI-1122242 AUR62013484 [cytosol] R-CQI-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119267 Phenylalanine degradation III none Chenopodium quinoa AUR62013549 R-CQI-8854121-3 AUR62013549 [cytosol] R-CQI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119556 Choline biosynthesis I none Chenopodium quinoa AUR62013551 R-CQI-1127752 AUR62013551 [cytosol] R-CQI-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119417 Stachyose biosynthesis none Chenopodium quinoa AUR62013597 R-CQI-1126373 AUR62013597 [cytosol] R-CQI-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Chenopodium quinoa AUR62013651 R-CQI-1130247-3 AUR62013651 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62013655 R-CQI-5631969-2 AUR62013655 [mitochondrial matrix] R-CQI-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119289 Arginine degradation none Chenopodium quinoa AUR62013655 R-CQI-5633275-2 AUR62013655 [cytosol] R-CQI-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119495 Citrulline biosynthesis none Chenopodium quinoa AUR62013677 R-CQI-1126354-8 AUR62013677 [cytosol] R-CQI-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119513 Pinobanksin biosynthesis none Chenopodium quinoa AUR62013677 R-CQI-1126354-8 AUR62013677 [cytosol] R-CQI-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119531 Flavonoid biosynthesis none Chenopodium quinoa AUR62013677 R-CQI-1126354-8 AUR62013677 [cytosol] R-CQI-1119630 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119630 Resveratrol biosynthesis none Chenopodium quinoa AUR62013691 R-CQI-9924407 EXPB5 [basolateral plasma membrane] R-CQI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924451 Shoot (tiller) formation and regulation of tiller angle none Chenopodium quinoa AUR62013773 R-CQI-8933728 AUR62013773 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62013791 R-CQI-1123819 AUR62013791 [plastid stroma] R-CQI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119464 Methylerythritol phosphate pathway none Chenopodium quinoa AUR62013799 R-CQI-5146760-2 AUR62013799 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62013806 R-CQI-9675878-2 AUR62013806 [nucleoplasm] R-CQI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675782 Maturation none Chenopodium quinoa AUR62013809 R-CQI-1124520 AUR62013809 [cytosol] R-CQI-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119278 PRPP biosynthesis I none Chenopodium quinoa AUR62013813 R-CQI-9025230-2 AUR62013813 [peroxisomal matrix] R-CQI-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119407 Ureide biosynthesis none Chenopodium quinoa AUR62013815 R-CQI-1125766-4 AUR62013815 [cytosol] R-CQI-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119557 GA12 biosynthesis none Chenopodium quinoa AUR62013829 R-CQI-1125631 AUR62013829 [cytosol] R-CQI-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119321 Glycerol degradation I none Chenopodium quinoa AUR62013876 R-CQI-1127899-2 AUR62013876 [cytosol] R-CQI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119370 Sterol biosynthesis none Chenopodium quinoa AUR62013939 R-CQI-9930197-2 MPK8 [nucleoplasm] R-CQI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9766881 TF network involved in salinity response none Chenopodium quinoa AUR62013948 R-CQI-1124939 AUR62013948 [cytosol] R-CQI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119540 Leucine biosynthesis none Chenopodium quinoa AUR62013953 R-CQI-1126560-6 AUR62013953 [cytosol] R-CQI-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119516 Trehalose biosynthesis I none Chenopodium quinoa AUR62013957 R-CQI-1126560-2 AUR62013957 [cytosol] R-CQI-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119516 Trehalose biosynthesis I none Chenopodium quinoa AUR62014005 R-CQI-1125638 AUR62014005 [cytosol] R-CQI-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119516 Trehalose biosynthesis I none Chenopodium quinoa AUR62014046 R-CQI-1130327-2 AUR62014046 [cytosol] R-CQI-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119586 Cyanate degradation none Chenopodium quinoa AUR62014128 R-CQI-1123250-2 AUR62014128 [cytosol] R-CQI-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119265 Tetrahydrofolate biosynthesis I none Chenopodium quinoa AUR62014128 R-CQI-1123250-2 AUR62014128 [cytosol] R-CQI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119523 Tetrahydrofolate biosynthesis II none Chenopodium quinoa AUR62014134 R-CQI-8868990-3 AUR62014134 [endoplasmic reticulum membrane] R-CQI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8868949 Intracellular auxin transport none Chenopodium quinoa AUR62014147 R-CQI-1125417-2 AUR62014147 [cytosol] R-CQI-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119265 Tetrahydrofolate biosynthesis I none Chenopodium quinoa AUR62014147 R-CQI-1125417-2 AUR62014147 [cytosol] R-CQI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119523 Tetrahydrofolate biosynthesis II none Chenopodium quinoa AUR62014170 R-CQI-1128632 AUR62014170 [cytosol] R-CQI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119465 Sucrose biosynthesis none Chenopodium quinoa AUR62014170 R-CQI-1128632 AUR62014170 [cytosol] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62014188 R-CQI-9918159 AUR62014188 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62014191 R-CQI-5679455-2 AUR62014191 [nucleoplasm] R-CQI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5679411 Gibberellin signaling none Chenopodium quinoa AUR62014191 R-CQI-6787020-2 AUR62014191 [cytosol] R-CQI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6787011 Jasmonic acid signaling none Chenopodium quinoa AUR62014203 R-CQI-1128071-2 AUR62014203 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62014220 R-CQI-1128263-2 AUR62014220 [plastid stroma] R-CQI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119509 Histidine biosynthesis I none Chenopodium quinoa AUR62014257 R-CQI-8987574 AUR62014257 [mitochondrial matrix] R-CQI-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119311 Glycine biosynthesis I none Chenopodium quinoa AUR62014282 R-CQI-1127467 AUR62014282 [cytosol] R-CQI-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119456 Brassinosteroid biosynthesis II none Chenopodium quinoa AUR62014284 R-CQI-6787113 AUR62014284 [nucleoplasm] R-CQI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6787011 Jasmonic acid signaling none Chenopodium quinoa AUR62014285 R-CQI-1127089-2 AUR62014285 [cytosol] R-CQI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119465 Sucrose biosynthesis none Chenopodium quinoa AUR62014313 R-CQI-9675818-2 AUR62014313 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62014326 R-CQI-4827046 AUR62014326 [plastid stroma] R-CQI-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-4827054 Tetrapyrrole biosynthesis I none Chenopodium quinoa AUR62014327 R-CQI-2685721 AUR62014327 [cytosol] R-CQI-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119580 IAA biosynthesis II none Chenopodium quinoa AUR62014340 R-CQI-1125550 AUR62014340 [cytosol] R-CQI-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119623 Acyl-CoA synthetase pathway none Chenopodium quinoa AUR62014343 R-CQI-9640708 phospho-AUR62014343 [nucleoplasm] R-CQI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640760 G1 phase none Chenopodium quinoa AUR62014343 R-CQI-9640770 AUR62014343 [nucleoplasm] R-CQI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640760 G1 phase none Chenopodium quinoa AUR62014343 R-CQI-9640708 phospho-AUR62014343 [nucleoplasm] R-CQI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640887 G1/S transition none Chenopodium quinoa AUR62014363 R-CQI-8854445-2 AUR62014363 [cytosol] R-CQI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119276 Choline biosynthesis III none Chenopodium quinoa AUR62014436 R-CQI-9826692 AUR62014436 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62014449 R-CQI-8868961 AUR62014449 [plant-type vacuole membrane] R-CQI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8868949 Intracellular auxin transport none Chenopodium quinoa AUR62014498 R-CQI-1127562 AUR62014498 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62014498 R-CQI-1130466 AUR62014498 [cytosol] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62014518 R-CQI-6787276 AUR62014518 [plastid stroma] R-CQI-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119261 Salicylate biosynthesis none Chenopodium quinoa AUR62014518 R-CQI-6787950 AUR62014518 [nucleoplasm] R-CQI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6788019 Salicylic acid signaling none Chenopodium quinoa AUR62014529 R-CQI-5632238-3 AUR62014529 [cytosol] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62014529 R-CQI-5632238-3 AUR62014529 [cytosol] R-CQI-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8934257 Transition from vegetative to reproductive shoot apical meristem none Chenopodium quinoa AUR62014529 R-CQI-9927894-3 AUR62014529 [nucleoplasm] R-CQI-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8934257 Transition from vegetative to reproductive shoot apical meristem none Chenopodium quinoa AUR62014529 R-CQI-5632238-3 AUR62014529 [cytosol] R-CQI-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9609102 Flower development none Chenopodium quinoa AUR62014529 R-CQI-5632238-3 AUR62014529 [cytosol] R-CQI-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9928831 Severe drought none Chenopodium quinoa AUR62014529 R-CQI-9927894-3 AUR62014529 [nucleoplasm] R-CQI-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9928831 Severe drought none Chenopodium quinoa AUR62014540 R-CQI-1127526 AUR62014540 [cytosol] R-CQI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119332 Jasmonic acid biosynthesis none Chenopodium quinoa AUR62014541 R-CQI-1123161-2 AUR62014541 [chloroplast] R-CQI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119494 Tryptophan biosynthesis none Chenopodium quinoa AUR62014562 R-CQI-1130416 AUR62014562 [mitochondrial matrix] R-CQI-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119337 Proline degradation none Chenopodium quinoa AUR62014562 R-CQI-1130416 AUR62014562 [mitochondrial matrix] R-CQI-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119495 Citrulline biosynthesis none Chenopodium quinoa AUR62014578 R-CQI-1125877-2 AUR62014578 [cytosol] R-CQI-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119456 Brassinosteroid biosynthesis II none Chenopodium quinoa AUR62014720 R-CQI-1129569-3 AUR62014720 [cytosol] R-CQI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119379 Flavin biosynthesis none Chenopodium quinoa AUR62014726 R-CQI-9025487-2 AUR62014726 [cytosol] R-CQI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119325 Sphingolipid metabolism none Chenopodium quinoa AUR62014734 R-CQI-1130006 AUR62014734 [plastid stroma] R-CQI-1119569 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119569 Kievitone biosynthesis none Chenopodium quinoa AUR62014735 R-CQI-1130006-4 AUR62014735 [plastid stroma] R-CQI-1119569 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119569 Kievitone biosynthesis none Chenopodium quinoa AUR62014791 R-CQI-8879004-2 AUR62014791 [nucleoplasm] R-CQI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8879007 Response to cold temperature none Chenopodium quinoa AUR62014800 R-CQI-9025541-2 AUR62014800 [endoplasmic reticulum membrane] R-CQI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119325 Sphingolipid metabolism none Chenopodium quinoa AUR62014803 R-CQI-9025224 AUR62014803 [endoplasmic reticulum lumen] R-CQI-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119502 Allantoin degradation none Chenopodium quinoa AUR62014809 R-CQI-9025728-2 AUR62014809 [plasma membrane] R-CQI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025727 Iron uptake and transport in root vascular system none Chenopodium quinoa AUR62014812 R-CQI-1122656-2 AUR62014812 [endosome] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62014812 R-CQI-5679312-2 AUR62014812 [plasma membrane] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62014824 R-CQI-1123433 AUR62014824 [cytosol] R-CQI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119332 Jasmonic acid biosynthesis none Chenopodium quinoa AUR62014824 R-CQI-1123433 AUR62014824 [cytosol] R-CQI-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119618 13-LOX and 13-HPL pathway none Chenopodium quinoa AUR62014884 R-CQI-5608184 AUR62014884 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62014884 R-CQI-5608184 AUR62014884 [nucleoplasm] R-CQI-9675304 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675304 Lateral root emergence none Chenopodium quinoa AUR62014902 R-CQI-1130189 AUR62014902 [cytosol] R-CQI-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Chenopodium quinoa AUR62014902 R-CQI-1130189 AUR62014902 [cytosol] R-CQI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119438 Secologanin and strictosidine biosynthesis none Chenopodium quinoa AUR62014902 R-CQI-1130189 AUR62014902 [cytosol] R-CQI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119486 IAA biosynthesis I none Chenopodium quinoa AUR62015368 R-CQI-9675876-2 AUR62015368 [nucleoplasm] R-CQI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675782 Maturation none Chenopodium quinoa AUR62015368 R-CQI-9675876-2 AUR62015368 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62015368 R-CQI-9675876-2 AUR62015368 [nucleoplasm] R-CQI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675885 Lagging strand synthesis none Chenopodium quinoa AUR62015373 R-CQI-1124598 AUR62015373 [cytosol] R-CQI-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119300 Glycolipid desaturation none Chenopodium quinoa AUR62015393 R-CQI-9675297-2 AUR62015393 [mitochondrion] R-CQI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030654 Primary root development none Chenopodium quinoa AUR62015395 R-CQI-5138486-2 AUR62015395 [plastid stroma] R-CQI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119263 Arginine biosynthesis none Chenopodium quinoa AUR62015395 R-CQI-1123709-2 AUR62015395 [cytosol] R-CQI-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119318 Proline biosynthesis V (from arginine) none Chenopodium quinoa AUR62015395 R-CQI-1123709-2 AUR62015395 [cytosol] R-CQI-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119444 Canavanine biosynthesis none Chenopodium quinoa AUR62015400 R-CQI-1129136-2 AUR62015400 [plastid stroma] R-CQI-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Chenopodium quinoa AUR62015425 R-CQI-1123430-2 AUR62015425 [cytosol] R-CQI-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119437 Glutathione redox reactions I none Chenopodium quinoa AUR62015445 R-CQI-1128812 AUR62015445 [cytosol] R-CQI-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119393 Asparagine degradation I none Chenopodium quinoa AUR62015448 R-CQI-1127820-2 AUR62015448 [plasma membrane] R-CQI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119314 Cellulose biosynthesis none Chenopodium quinoa AUR62015459 R-CQI-1123296 AUR62015459 [chloroplast envelope] R-CQI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119402 Phospholipid biosynthesis I none Chenopodium quinoa AUR62015461 R-CQI-9658563 AUR62015461 [endoplasmic reticulum lumen] R-CQI-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119502 Allantoin degradation none Chenopodium quinoa AUR62015476 R-CQI-5225766 AUR62015476 [nucleoplasm] R-CQI-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5225756 Ethylene mediated signaling none Chenopodium quinoa AUR62015490 R-CQI-5633332 AUR62015490 [plastid stroma] R-CQI-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5633340 Citrulline-nitric oxide cycle none Chenopodium quinoa AUR62015517 R-CQI-1125569-2 AUR62015517 [cytosol] R-CQI-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119516 Trehalose biosynthesis I none Chenopodium quinoa AUR62015518 R-CQI-1126888-2 AUR62015518 [cytosol] R-CQI-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119360 Fructan biosynthesis none Chenopodium quinoa AUR62015536 R-CQI-5683263-2 AUR62015536 [cytosol] R-CQI-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119586 Cyanate degradation none Chenopodium quinoa AUR62015577 R-CQI-8933738-2 AUR62015577 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62016280 R-CQI-1130308-2 AUR62016280 [plastid stroma] R-CQI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119430 Chorismate biosynthesis none Chenopodium quinoa AUR62016287 R-CQI-5632157-2 AUR62016287 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62016287 R-CQI-5632157-2 AUR62016287 [nucleoplasm] R-CQI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5654828 Strigolactone signaling none Chenopodium quinoa AUR62016312 R-CQI-1126860-2 AUR62016312 [cytosol] R-CQI-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119321 Glycerol degradation I none Chenopodium quinoa AUR62016351 R-CQI-1125906 AUR62016351 [cytosol] R-CQI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119276 Choline biosynthesis III none Chenopodium quinoa AUR62016372 R-CQI-1129055-3 AUR62016372 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62016397 R-CQI-1123745 AUR62016397 [endoplasmic reticulum membrane] R-CQI-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119260 Cardiolipin biosynthesis none Chenopodium quinoa AUR62016397 R-CQI-1123745 AUR62016397 [endoplasmic reticulum membrane] R-CQI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119402 Phospholipid biosynthesis I none Chenopodium quinoa AUR62016418 R-CQI-8987467-2 AUR62016418 [chloroplast] R-CQI-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119502 Allantoin degradation none Chenopodium quinoa AUR62016514 R-CQI-1126165 AUR62016514 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62016514 R-CQI-5608120 AUR62016514 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62016561 R-CQI-8868994-2 AUR62016561 [endoplasmic reticulum membrane] R-CQI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8868949 Intracellular auxin transport none Chenopodium quinoa AUR62016604 R-CQI-5138505 AUR62016604 [plastid stroma] R-CQI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119263 Arginine biosynthesis none Chenopodium quinoa AUR62016604 R-CQI-5138505 AUR62016604 [plastid stroma] R-CQI-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119539 Ornithine biosynthesis none Chenopodium quinoa AUR62016604 R-CQI-5138505 AUR62016604 [plastid stroma] R-CQI-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119622 Arginine biosynthesis II (acetyl cycle) none Chenopodium quinoa AUR62016637 R-CQI-4415007-3 AUR62016637 [cytosol] R-CQI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-3899351 Abscisic acid (ABA) mediated signaling none Chenopodium quinoa AUR62016637 R-CQI-4415016-3 phospho-AUR62016637 [cytosol] R-CQI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-3899351 Abscisic acid (ABA) mediated signaling none Chenopodium quinoa AUR62016637 R-CQI-4415007-3 AUR62016637 [cytosol] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62016652 R-CQI-1124613 AUR62016652 [plasma membrane] R-CQI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119314 Cellulose biosynthesis none Chenopodium quinoa AUR62016698 R-CQI-1128745-2 AUR62016698 [plastid stroma] R-CQI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119464 Methylerythritol phosphate pathway none Chenopodium quinoa AUR62016702 R-CQI-1129208-2 AUR62016702 [chloroplast envelope] R-CQI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119402 Phospholipid biosynthesis I none Chenopodium quinoa AUR62016705 R-CQI-9675274 AUR62016705 [nucleoplasm] R-CQI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030654 Primary root development none Chenopodium quinoa AUR62016726 R-CQI-1129818 AUR62016726 [mitochondrial matrix] R-CQI-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119365 Lysine degradation II none Chenopodium quinoa AUR62016726 R-CQI-1173242 AUR62016726 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62016748 R-CQI-1127815-2 AUR62016748 [cytosol] R-CQI-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119450 Homocysteine biosynthesis none Chenopodium quinoa AUR62016755 R-CQI-1123717 AUR62016755 [cytosol] R-CQI-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119395 Maackiain biosynthesis none Chenopodium quinoa AUR62016755 R-CQI-1123717 AUR62016755 [cytosol] R-CQI-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119453 Medicarpin biosynthesis none Chenopodium quinoa AUR62016760 R-CQI-1127562-3 AUR62016760 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62016760 R-CQI-1130466-3 AUR62016760 [cytosol] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62016765 R-CQI-1125417 AUR62016765 [cytosol] R-CQI-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119265 Tetrahydrofolate biosynthesis I none Chenopodium quinoa AUR62016765 R-CQI-1125417 AUR62016765 [cytosol] R-CQI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119523 Tetrahydrofolate biosynthesis II none Chenopodium quinoa AUR62016767 R-CQI-1127738 AUR62016767 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62016767 R-CQI-1127738 AUR62016767 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62016767 R-CQI-5606514 AUR62016767 [plastid stroma] R-CQI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119419 Lysine biosynthesis VI none Chenopodium quinoa AUR62016772 R-CQI-4788601 AUR62016772 [plastid stroma] R-CQI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119509 Histidine biosynthesis I none Chenopodium quinoa AUR62016793 R-CQI-9640761 AUR62016793 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62016793 R-CQI-9640761 AUR62016793 [nucleoplasm] R-CQI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675824 DNA replication Initiation none Chenopodium quinoa AUR62016810 R-CQI-1128707-2 AUR62016810 [cytosol] R-CQI-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Chenopodium quinoa AUR62016810 R-CQI-1128707-2 AUR62016810 [cytosol] R-CQI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119370 Sterol biosynthesis none Chenopodium quinoa AUR62016810 R-CQI-1128707-2 AUR62016810 [cytosol] R-CQI-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119439 Cholesterol biosynthesis III (via desmosterol) none Chenopodium quinoa AUR62016810 R-CQI-1128707-2 AUR62016810 [cytosol] R-CQI-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119559 Cholesterol biosynthesis I none Chenopodium quinoa AUR62016811 R-CQI-1128707 AUR62016811 [cytosol] R-CQI-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Chenopodium quinoa AUR62016811 R-CQI-1128707 AUR62016811 [cytosol] R-CQI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119370 Sterol biosynthesis none Chenopodium quinoa AUR62016811 R-CQI-1128707 AUR62016811 [cytosol] R-CQI-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119439 Cholesterol biosynthesis III (via desmosterol) none Chenopodium quinoa AUR62016811 R-CQI-1128707 AUR62016811 [cytosol] R-CQI-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119559 Cholesterol biosynthesis I none Chenopodium quinoa AUR62016840 R-CQI-1123832 AUR62016840 [cytosol] R-CQI-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119304 Putrescine biosynthesis II none Chenopodium quinoa AUR62016840 R-CQI-1123832 AUR62016840 [cytosol] R-CQI-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119447 Putrescine biosynthesis I none Chenopodium quinoa AUR62016846 R-CQI-1125093 AUR62016846 [cytosol] R-CQI-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119456 Brassinosteroid biosynthesis II none Chenopodium quinoa AUR62016900 R-CQI-1129569 AUR62016900 [cytosol] R-CQI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119379 Flavin biosynthesis none Chenopodium quinoa AUR62016908 R-CQI-9025487 AUR62016908 [cytosol] R-CQI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119325 Sphingolipid metabolism none Chenopodium quinoa AUR62016949 R-CQI-1123717-4 AUR62016949 [cytosol] R-CQI-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119395 Maackiain biosynthesis none Chenopodium quinoa AUR62016949 R-CQI-1123717-4 AUR62016949 [cytosol] R-CQI-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119453 Medicarpin biosynthesis none Chenopodium quinoa AUR62016978 R-CQI-8879004 AUR62016978 [nucleoplasm] R-CQI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8879007 Response to cold temperature none Chenopodium quinoa AUR62016991 R-CQI-9025541 AUR62016991 [endoplasmic reticulum membrane] R-CQI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119325 Sphingolipid metabolism none Chenopodium quinoa AUR62016994 R-CQI-9025224-2 AUR62016994 [endoplasmic reticulum lumen] R-CQI-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119502 Allantoin degradation none Chenopodium quinoa AUR62017001 R-CQI-9025728-3 AUR62017001 [plasma membrane] R-CQI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025727 Iron uptake and transport in root vascular system none Chenopodium quinoa AUR62017003 R-CQI-9025728-4 AUR62017003 [plasma membrane] R-CQI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025727 Iron uptake and transport in root vascular system none Chenopodium quinoa AUR62017007 R-CQI-1122656 AUR62017007 [endosome] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62017007 R-CQI-5679312 AUR62017007 [plasma membrane] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62017066 R-CQI-1127723 AUR62017066 [cytosol] R-CQI-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119331 Cysteine biosynthesis I none Chenopodium quinoa AUR62017117 R-CQI-1126998 AUR62017117 [cytosol] R-CQI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119615 Mevalonate pathway none Chenopodium quinoa AUR62017131 R-CQI-1130006-5 AUR62017131 [plastid stroma] R-CQI-1119569 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119569 Kievitone biosynthesis none Chenopodium quinoa AUR62017133 R-CQI-1130006-3 AUR62017133 [plastid stroma] R-CQI-1119569 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119569 Kievitone biosynthesis none Chenopodium quinoa AUR62017160 R-CQI-5149694 AUR62017160 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62017196 R-CQI-1127733-2 AUR62017196 [cytosol] R-CQI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119460 Isoleucine biosynthesis from threonine none Chenopodium quinoa AUR62017196 R-CQI-1127733-2 AUR62017196 [cytosol] R-CQI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119600 Valine biosynthesis none Chenopodium quinoa AUR62017225 R-CQI-1126615 AUR62017225 [cytosol] R-CQI-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119437 Glutathione redox reactions I none Chenopodium quinoa AUR62017270 R-CQI-5633270 AUR62017270 [cytosol] R-CQI-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119495 Citrulline biosynthesis none Chenopodium quinoa AUR62017272 R-CQI-5655076-2 AUR62017272 [Golgi lumen] R-CQI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5655101 Xyloglucan biosynthesis none Chenopodium quinoa AUR62017273 R-CQI-1130394 AUR62017273 [cytosol] R-CQI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119452 Galactose degradation II none Chenopodium quinoa AUR62017279 R-CQI-9675851 AUR62017279 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62017288 R-CQI-5632261 AUR62017288 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62017296 R-CQI-9826696 AUR62017296 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62017297 R-CQI-8879029-2 DREB1G [nucleoplasm] R-CQI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8879007 Response to cold temperature none Chenopodium quinoa AUR62017297 R-CQI-8879085 AUR62017297 [nucleoplasm] R-CQI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8879007 Response to cold temperature none Chenopodium quinoa AUR62017297 R-CQI-8879050 CBF1 homolog [nucleoplasm] R-CQI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8879007 Response to cold temperature none Chenopodium quinoa AUR62017311 R-CQI-1128328 AUR62017311 [cytosol] R-CQI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119615 Mevalonate pathway none Chenopodium quinoa AUR62017313 R-CQI-1125610-4 AUR62017313 [cytosol] R-CQI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119276 Choline biosynthesis III none Chenopodium quinoa AUR62017326 R-CQI-9639892-5 AUR62017326 [cell wall] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62017327 R-CQI-9639892-4 AUR62017327 [cell wall] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62017328 R-CQI-9639892-7 AUR62017328 [cell wall] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62017353 R-CQI-3899389 AUR62017353 [plasma membrane] R-CQI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-3899351 Abscisic acid (ABA) mediated signaling none Chenopodium quinoa AUR62017353 R-CQI-3899371 phospho-AUR62017353 [plasma membrane] R-CQI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-3899351 Abscisic acid (ABA) mediated signaling none Chenopodium quinoa AUR62017517 R-CQI-9916125 AUR62017517 [nucleoplasm] R-CQI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9916190 Root angle formation: elongation and curvature response none Chenopodium quinoa AUR62017517 R-CQI-9916231 AUR62017517 [cytosol] R-CQI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9916190 Root angle formation: elongation and curvature response none Chenopodium quinoa AUR62017517 R-CQI-9916199 phospho-AUR62017517 [cytosol] R-CQI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9916190 Root angle formation: elongation and curvature response none Chenopodium quinoa AUR62017573 R-CQI-1124083 AUR62017573 [cytosol] R-CQI-1119323 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119323 Lipid-A-precursor biosynthesis none Chenopodium quinoa AUR62017583 R-CQI-8933714 AUR62017583 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62017585 R-CQI-1122827-2 AUR62017585 [cytosol] R-CQI-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119334 Ethylene biosynthesis from methionine none Chenopodium quinoa AUR62017589 R-CQI-1128974-6 AUR62017589 [cytosol] R-CQI-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119287 Vitamin E biosynthesis none Chenopodium quinoa AUR62017589 R-CQI-1128974-6 AUR62017589 [cytosol] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62017612 R-CQI-1125504 AUR62017612 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62017612 R-CQI-1125504 AUR62017612 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62017612 R-CQI-1125504 AUR62017612 [cytosol] R-CQI-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119295 Homoserine biosynthesis none Chenopodium quinoa AUR62017612 R-CQI-5606489 AUR62017612 [plastid stroma] R-CQI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119419 Lysine biosynthesis VI none Chenopodium quinoa AUR62017628 R-CQI-5608169 AUR62017628 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62017666 R-CQI-5654859 AUR62017666 [nucleoplasm] R-CQI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5654828 Strigolactone signaling none Chenopodium quinoa AUR62017666 R-CQI-5654859 AUR62017666 [nucleoplasm] R-CQI-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Chenopodium quinoa AUR62017693 R-CQI-1127192-3 AUR62017693 [cytosol] R-CQI-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119291 Nitrate assimilation none Chenopodium quinoa AUR62017693 R-CQI-1127192-3 AUR62017693 [cytosol] R-CQI-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119293 Glutamine biosynthesis I none Chenopodium quinoa AUR62017693 R-CQI-1127192-3 AUR62017693 [cytosol] R-CQI-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119443 Ammonia assimilation cycle none Chenopodium quinoa AUR62017711 R-CQI-1125237 AUR62017711 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62017712 R-CQI-9826597-3 AUR62017712 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62017714 R-CQI-9826597-2 AUR62017714 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62017725 R-CQI-1123525 AUR62017725 [cytosol] R-CQI-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119384 NAD biosynthesis I (from aspartate) none Chenopodium quinoa AUR62017726 R-CQI-8933787 AUR62017726 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62017731 R-CQI-1125587-2 AUR62017731 [cytosol] R-CQI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119379 Flavin biosynthesis none Chenopodium quinoa AUR62017752 R-CQI-5632121 AUR62017752 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62018079 R-CQI-1129390-3 AUR62018079 [mitochondrion] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62018102 R-CQI-9766876-3 AUR62018102 [nucleoplasm] R-CQI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9766881 TF network involved in salinity response none Chenopodium quinoa AUR62018102 R-CQI-9766876-3 AUR62018102 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62018127 R-CQI-1126095 AUR62018127 [cytosol] R-CQI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119389 Phenylalanine biosynthesis I none Chenopodium quinoa AUR62018151 R-CQI-1124905 AUR62018151 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62018154 R-CQI-8987531-8 AUR62018154 [chloroplast] R-CQI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119312 Photorespiration none Chenopodium quinoa AUR62018154 R-CQI-1125951-8 AUR62018154 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62018169 R-CQI-9681886-3 AUR62018169 [cytosol] R-CQI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119574 UDP-L-arabinose biosynthesis and transport none Chenopodium quinoa AUR62018248 R-CQI-5608161 AUR62018248 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62018285 R-CQI-1130141-6 AUR62018285 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62018285 R-CQI-1130141-6 AUR62018285 [mitochondrial matrix] R-CQI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119540 Leucine biosynthesis none Chenopodium quinoa AUR62018342 R-CQI-5603891-2 AUR62018342 [plastid stroma] R-CQI-1119420 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119420 Glutamate biosynthesis V none Chenopodium quinoa AUR62018342 R-CQI-1125410-2 AUR62018342 [chloroplast stroma] R-CQI-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119443 Ammonia assimilation cycle none Chenopodium quinoa AUR62018350 R-CQI-6788172-2 AUR62018350 [nucleoplasm] R-CQI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6788019 Salicylic acid signaling none Chenopodium quinoa AUR62018363 R-CQI-1126593 AUR62018363 [endosome] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62018363 R-CQI-5679293 AUR62018363 [plasma membrane] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62018363 R-CQI-8858098 AUR62018363 [plasma membrane] R-CQI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8858053 Polar auxin transport none Chenopodium quinoa AUR62018405 R-CQI-9025728-5 AUR62018405 [plasma membrane] R-CQI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025727 Iron uptake and transport in root vascular system none Chenopodium quinoa AUR62018452 R-CQI-9025819-3 AUR62018452 [plasma membrane] R-CQI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025727 Iron uptake and transport in root vascular system none Chenopodium quinoa AUR62018454 R-CQI-8986767-2 AUR62018454 [plastid] R-CQI-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8986768 Anther and pollen development none Chenopodium quinoa AUR62018508 R-CQI-1123148 AUR62018508 [cytosol] R-CQI-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119300 Glycolipid desaturation none Chenopodium quinoa AUR62018550 R-CQI-1128637-2 AUR62018550 [chloroplast] R-CQI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119494 Tryptophan biosynthesis none Chenopodium quinoa AUR62018554 R-CQI-1129029 AUR62018554 [cytosol] R-CQI-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119501 S-adenosyl-L-methionine cycle none Chenopodium quinoa AUR62018558 R-CQI-1129921 AUR62018558 [cytosol] R-CQI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119428 GDP-D-rhamnose biosynthesis none Chenopodium quinoa AUR62018558 R-CQI-1129921 AUR62018558 [cytosol] R-CQI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Chenopodium quinoa AUR62018602 R-CQI-9639892 AUR62018602 [cell wall] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62018603 R-CQI-9639892-3 AUR62018603 [cell wall] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62018604 R-CQI-9639892-8 AUR62018604 [cell wall] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62018610 R-CQI-5149678-2 AUR62018610 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62018623 R-CQI-9924558-2 NCED1 [plastid] R-CQI-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Chenopodium quinoa AUR62018641 R-CQI-1122783 AUR62018641 [chloroplast stroma] R-CQI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119402 Phospholipid biosynthesis I none Chenopodium quinoa AUR62018644 R-CQI-1129547-3 AUR62018644 [cytosol] R-CQI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119389 Phenylalanine biosynthesis I none Chenopodium quinoa AUR62018644 R-CQI-1129547-3 AUR62018644 [cytosol] R-CQI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119400 Methionine biosynthesis II none Chenopodium quinoa AUR62018644 R-CQI-1129547-3 AUR62018644 [cytosol] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62018665 R-CQI-8854127-2 AUR62018665 [cytosol] R-CQI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119556 Choline biosynthesis I none Chenopodium quinoa AUR62018666 R-CQI-8854127 AUR62018666 [cytosol] R-CQI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119556 Choline biosynthesis I none Chenopodium quinoa AUR62018694 R-CQI-9638999-5 AUR62018694 [cytosol] R-CQI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119434 Phytic acid biosynthesis (lipid-independent) none Chenopodium quinoa AUR62018713 R-CQI-6787119 AUR62018713 [nucleoplasm] R-CQI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6787011 Jasmonic acid signaling none Chenopodium quinoa AUR62018722 R-CQI-5138481 AUR62018722 [plastid stroma] R-CQI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119263 Arginine biosynthesis none Chenopodium quinoa AUR62018722 R-CQI-5138481 AUR62018722 [plastid stroma] R-CQI-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119539 Ornithine biosynthesis none Chenopodium quinoa AUR62018743 R-CQI-8987554 AUR62018743 [mitochondrial matrix] R-CQI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119312 Photorespiration none Chenopodium quinoa AUR62018770 R-CQI-1123046-3 AUR62018770 [cytosol] R-CQI-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119386 UDP-N-acetylgalactosamine biosynthesis none Chenopodium quinoa AUR62018798 R-CQI-1130181-2 AUR62018798 [plastid stroma] R-CQI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119430 Chorismate biosynthesis none Chenopodium quinoa AUR62018810 R-CQI-8933728-2 AUR62018810 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62018839 R-CQI-9658589 AUR62018839 [endoplasmic reticulum lumen] R-CQI-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119502 Allantoin degradation none Chenopodium quinoa AUR62018874 R-CQI-1129438-3 AUR62018874 [cytosol] R-CQI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119438 Secologanin and strictosidine biosynthesis none Chenopodium quinoa AUR62018877 R-CQI-1126053 AUR62018877 [mitochondrial matrix] R-CQI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119479 Valine degradation none Chenopodium quinoa AUR62018922 R-CQI-8933710-2 AUR62018922 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62018952 R-CQI-1129934 AUR62018952 [plastid stroma] R-CQI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119430 Chorismate biosynthesis none Chenopodium quinoa AUR62018975 R-CQI-9918264 ISA3 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62019003 R-CQI-1124490 AUR62019003 [cytosol] R-CQI-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119534 Pyridoxal 5'-phosphate salvage pathway none Chenopodium quinoa AUR62019003 R-CQI-1124490 AUR62019003 [cytosol] R-CQI-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119594 Pyridoxal 5'-phosphate biosynthesis none Chenopodium quinoa AUR62019004 R-CQI-5608140-2 AUR62019004 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62019014 R-CQI-9640777-4 AUR62019014 [nucleoplasm] R-CQI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640760 G1 phase none Chenopodium quinoa AUR62019014 R-CQI-9640777-4 AUR62019014 [nucleoplasm] R-CQI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640887 G1/S transition none Chenopodium quinoa AUR62019015 R-CQI-5632192 AUR62019015 [cytosol] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62019023 R-CQI-2960195-2 AUR62019023 [cytosol] R-CQI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119410 Ascorbate biosynthesis none Chenopodium quinoa AUR62019023 R-CQI-2960195-2 AUR62019023 [cytosol] R-CQI-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119570 Cytosolic glycolysis none Chenopodium quinoa AUR62019033 R-CQI-8854121 AUR62019033 [cytosol] R-CQI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119556 Choline biosynthesis I none Chenopodium quinoa AUR62019054 R-CQI-9675818 AUR62019054 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62019066 R-CQI-4827046-2 AUR62019066 [plastid stroma] R-CQI-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-4827054 Tetrapyrrole biosynthesis I none Chenopodium quinoa AUR62019067 R-CQI-2685721-2 AUR62019067 [cytosol] R-CQI-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119580 IAA biosynthesis II none Chenopodium quinoa AUR62019081 R-CQI-1125550-2 AUR62019081 [cytosol] R-CQI-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119623 Acyl-CoA synthetase pathway none Chenopodium quinoa AUR62019085 R-CQI-9640708-2 phospho-AUR62019085 [nucleoplasm] R-CQI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640760 G1 phase none Chenopodium quinoa AUR62019085 R-CQI-9640770-2 AUR62019085 [nucleoplasm] R-CQI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640760 G1 phase none Chenopodium quinoa AUR62019085 R-CQI-9640708-2 phospho-AUR62019085 [nucleoplasm] R-CQI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640887 G1/S transition none Chenopodium quinoa AUR62019436 R-CQI-1129569-2 AUR62019436 [cytosol] R-CQI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119379 Flavin biosynthesis none Chenopodium quinoa AUR62019479 R-CQI-1129547-2 AUR62019479 [cytosol] R-CQI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119389 Phenylalanine biosynthesis I none Chenopodium quinoa AUR62019479 R-CQI-1129547-2 AUR62019479 [cytosol] R-CQI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119400 Methionine biosynthesis II none Chenopodium quinoa AUR62019479 R-CQI-1129547-2 AUR62019479 [cytosol] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62019513 R-CQI-1127734 AUR62019513 [cytosol] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62019519 R-CQI-9639211 AUR62019519 [plant-type vacuole membrane] R-CQI-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639136 Response to Aluminum stress none Chenopodium quinoa AUR62019540 R-CQI-1128071 AUR62019540 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62019605 R-CQI-9675827 AUR62019605 [nucleoplasm] R-CQI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675782 Maturation none Chenopodium quinoa AUR62019605 R-CQI-9675827 AUR62019605 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62019605 R-CQI-9675827 AUR62019605 [nucleoplasm] R-CQI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675885 Lagging strand synthesis none Chenopodium quinoa AUR62019606 R-CQI-1123733 AUR62019606 [cytosol] R-CQI-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119484 Folate polyglutamylation II none Chenopodium quinoa AUR62019613 R-CQI-5632315-2 AUR62019613 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62019613 R-CQI-5632284-2 phospho-AUR62019613 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62019613 R-CQI-5632342-2 phospho-AUR62019613 [cytosol] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62019613 R-CQI-5632315-2 AUR62019613 [nucleoplasm] R-CQI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5679411 Gibberellin signaling none Chenopodium quinoa AUR62019657 R-CQI-1126560-5 AUR62019657 [cytosol] R-CQI-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119516 Trehalose biosynthesis I none Chenopodium quinoa AUR62019658 R-CQI-1126560-4 AUR62019658 [cytosol] R-CQI-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119516 Trehalose biosynthesis I none Chenopodium quinoa AUR62019663 R-CQI-1124939-2 AUR62019663 [cytosol] R-CQI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119540 Leucine biosynthesis none Chenopodium quinoa AUR62019673 R-CQI-9930197 MPK8 [nucleoplasm] R-CQI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9766881 TF network involved in salinity response none Chenopodium quinoa AUR62019685 R-CQI-1123482 AUR62019685 [plastid stroma] R-CQI-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119367 Polyisoprenoid biosynthesis none Chenopodium quinoa AUR62019708 R-CQI-9612372 AUR62019708 [mitochondrial matrix] R-CQI-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119612 Cysteine degradation none Chenopodium quinoa AUR62019764 R-CQI-9607105 AUR62019764 [mitochondrion] R-CQI-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9607185 Generation of superoxide radicals none Chenopodium quinoa AUR62019794 R-CQI-1129485 AUR62019794 [cytosol] R-CQI-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119341 Galactosylcyclitol biosynthesis none Chenopodium quinoa AUR62019802 R-CQI-8933788-2 AUR62019802 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62019849 R-CQI-1122936 AUR62019849 [cytosol] R-CQI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119452 Galactose degradation II none Chenopodium quinoa AUR62019882 R-CQI-1129880-2 AUR62019882 [chloroplast] R-CQI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119494 Tryptophan biosynthesis none Chenopodium quinoa AUR62019884 R-CQI-1128322-3 AUR62019884 [cytosol] R-CQI-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119384 NAD biosynthesis I (from aspartate) none Chenopodium quinoa AUR62019888 R-CQI-1124788 AUR62019888 [cytosol] R-CQI-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119601 Trehalose degradation II none Chenopodium quinoa AUR62019912 R-CQI-9025699-6 AUR62019912 [plasma membrane] R-CQI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8858053 Polar auxin transport none Chenopodium quinoa AUR62019912 R-CQI-9025699-6 AUR62019912 [plasma membrane] R-CQI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025727 Iron uptake and transport in root vascular system none Chenopodium quinoa AUR62019913 R-CQI-9025699 AUR62019913 [plasma membrane] R-CQI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8858053 Polar auxin transport none Chenopodium quinoa AUR62019913 R-CQI-9025699 AUR62019913 [plasma membrane] R-CQI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025727 Iron uptake and transport in root vascular system none Chenopodium quinoa AUR62019941 R-CQI-9918210 granule-bound starch synthase 1 (GBSSI, or Waxy) [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62019941 R-CQI-9918222 AUR62019941 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62019941 R-CQI-9626344 AUR62019941 [plastid stroma] R-CQI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9626305 Regulatory network of nutrient accumulation none Chenopodium quinoa AUR62019966 R-CQI-1127338 AUR62019966 [mitochondrial inner membrane] R-CQI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119402 Phospholipid biosynthesis I none Chenopodium quinoa AUR62019969 R-CQI-1124032 AUR62019969 [cytosol] R-CQI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119540 Leucine biosynthesis none Chenopodium quinoa AUR62019972 R-CQI-1125340-2 AUR62019972 [plastid stroma] R-CQI-1119274 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119274 Monoterpene biosynthesis none Chenopodium quinoa AUR62019972 R-CQI-1125340-2 AUR62019972 [plastid stroma] R-CQI-1119593 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119593 Oleoresin monoterpene volatiles biosynthesis none Chenopodium quinoa AUR62019980 R-CQI-9826639-2 AUR62019980 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62020044 R-CQI-4415078-3 AUR62020044 [cytosol] R-CQI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-3899351 Abscisic acid (ABA) mediated signaling none Chenopodium quinoa AUR62020046 R-CQI-1127539-2 AUR62020046 [cytosol] R-CQI-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Chenopodium quinoa AUR62020046 R-CQI-1127539-2 AUR62020046 [cytosol] R-CQI-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119439 Cholesterol biosynthesis III (via desmosterol) none Chenopodium quinoa AUR62020046 R-CQI-1127539-2 AUR62020046 [cytosol] R-CQI-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119559 Cholesterol biosynthesis I none Chenopodium quinoa AUR62020058 R-CQI-1128396 AUR62020058 [cytosol] R-CQI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119473 Cytokinins-O-glucoside biosynthesis none Chenopodium quinoa AUR62020073 R-CQI-9681885-2 AUR62020073 [Golgi membrane] R-CQI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119574 UDP-L-arabinose biosynthesis and transport none Chenopodium quinoa AUR62020074 R-CQI-9640689-2 AUR62020074 [nucleoplasm] R-CQI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675782 Maturation none Chenopodium quinoa AUR62020074 R-CQI-9640689-2 AUR62020074 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62020074 R-CQI-9640689-2 AUR62020074 [nucleoplasm] R-CQI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675885 Lagging strand synthesis none Chenopodium quinoa AUR62020097 R-CQI-1129355-2 AUR62020097 [plastid] R-CQI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119403 Removal of superoxide radicals none Chenopodium quinoa AUR62020110 R-CQI-9640886-2 AUR62020110 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62020112 R-CQI-1123998 AUR62020112 [chloroplast] R-CQI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119494 Tryptophan biosynthesis none Chenopodium quinoa AUR62020114 R-CQI-1123998-4 AUR62020114 [chloroplast] R-CQI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119494 Tryptophan biosynthesis none Chenopodium quinoa AUR62020171 R-CQI-1126387-2 AUR62020171 [cytosol] R-CQI-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119295 Homoserine biosynthesis none Chenopodium quinoa AUR62020185 R-CQI-1125151 AUR62020185 [cytosol] R-CQI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119400 Methionine biosynthesis II none Chenopodium quinoa AUR62020185 R-CQI-1125151 AUR62020185 [cytosol] R-CQI-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119501 S-adenosyl-L-methionine cycle none Chenopodium quinoa AUR62020190 R-CQI-1250418-3 AUR62020190 [cytosol] R-CQI-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119374 Abscisic acid biosynthesis none Chenopodium quinoa AUR62020190 R-CQI-1129637-3 AUR62020190 [cytosol] R-CQI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119486 IAA biosynthesis I none Chenopodium quinoa AUR62020206 R-CQI-1127625 AUR62020206 [cytosol] R-CQI-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119265 Tetrahydrofolate biosynthesis I none Chenopodium quinoa AUR62020206 R-CQI-1127625 AUR62020206 [cytosol] R-CQI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119523 Tetrahydrofolate biosynthesis II none Chenopodium quinoa AUR62020208 R-CQI-1126604 AUR62020208 [cytosol] R-CQI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119438 Secologanin and strictosidine biosynthesis none Chenopodium quinoa AUR62020210 R-CQI-9826669 OsYABBY6 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62020222 R-CQI-5632111 AUR62020222 [cytosol] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62020222 R-CQI-5632216 phospho-AUR62020222 [cytosol] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62020244 R-CQI-9640739-2 AUR62020244 [nucleoplasm] R-CQI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640887 G1/S transition none Chenopodium quinoa AUR62020245 R-CQI-9640739-3 AUR62020245 [nucleoplasm] R-CQI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640887 G1/S transition none Chenopodium quinoa AUR62020252 R-CQI-1127161 AUR62020252 [cytosol] R-CQI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119486 IAA biosynthesis I none Chenopodium quinoa AUR62020323 R-CQI-5632251 AUR62020323 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62020350 R-CQI-1127733 AUR62020350 [cytosol] R-CQI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119460 Isoleucine biosynthesis from threonine none Chenopodium quinoa AUR62020350 R-CQI-1127733 AUR62020350 [cytosol] R-CQI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119600 Valine biosynthesis none Chenopodium quinoa AUR62020382 R-CQI-1128906 AUR62020382 [cytosol] R-CQI-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119444 Canavanine biosynthesis none Chenopodium quinoa AUR62020390 R-CQI-1122403 AUR62020390 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62020414 R-CQI-1129219 AUR62020414 [cytosol] R-CQI-1119323 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119323 Lipid-A-precursor biosynthesis none Chenopodium quinoa AUR62020415 R-CQI-5632133-5 AUR62020415 [cytosol] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62020505 R-CQI-1129867 AUR62020505 [chloroplast] R-CQI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119494 Tryptophan biosynthesis none Chenopodium quinoa AUR62020506 R-CQI-9918175 AUR62020506 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62020619 R-CQI-9645872 AUR62020619 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62020642 R-CQI-9681920 AUR62020642 [cytosol] R-CQI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119574 UDP-L-arabinose biosynthesis and transport none Chenopodium quinoa AUR62020644 R-CQI-5632133-2 AUR62020644 [cytosol] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62020860 R-CQI-1129921-2 AUR62020860 [cytosol] R-CQI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119428 GDP-D-rhamnose biosynthesis none Chenopodium quinoa AUR62020860 R-CQI-1129921-2 AUR62020860 [cytosol] R-CQI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Chenopodium quinoa AUR62020865 R-CQI-1129029-2 AUR62020865 [cytosol] R-CQI-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119501 S-adenosyl-L-methionine cycle none Chenopodium quinoa AUR62020869 R-CQI-1128637 AUR62020869 [chloroplast] R-CQI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119494 Tryptophan biosynthesis none Chenopodium quinoa AUR62020964 R-CQI-8986767 AUR62020964 [plastid] R-CQI-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8986768 Anther and pollen development none Chenopodium quinoa AUR62020967 R-CQI-9025819 AUR62020967 [plasma membrane] R-CQI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025727 Iron uptake and transport in root vascular system none Chenopodium quinoa AUR62021038 R-CQI-9025728 AUR62021038 [plasma membrane] R-CQI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025727 Iron uptake and transport in root vascular system none Chenopodium quinoa AUR62021096 R-CQI-1126602 AUR62021096 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62021096 R-CQI-1126602 AUR62021096 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62021096 R-CQI-5606494 AUR62021096 [plastid stroma] R-CQI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119419 Lysine biosynthesis VI none Chenopodium quinoa AUR62021168 R-CQI-1250417 AUR62021168 [cytosol] R-CQI-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119374 Abscisic acid biosynthesis none Chenopodium quinoa AUR62021235 R-CQI-1129478 AUR62021235 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62021235 R-CQI-1129478 AUR62021235 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62021235 R-CQI-5606483 AUR62021235 [plastid stroma] R-CQI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119419 Lysine biosynthesis VI none Chenopodium quinoa AUR62021242 R-CQI-8879029 DREB1G [nucleoplasm] R-CQI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8879007 Response to cold temperature none Chenopodium quinoa AUR62021242 R-CQI-8879085-2 AUR62021242 [nucleoplasm] R-CQI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8879007 Response to cold temperature none Chenopodium quinoa AUR62021242 R-CQI-8879050-2 CBF1 homolog [nucleoplasm] R-CQI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8879007 Response to cold temperature none Chenopodium quinoa AUR62021243 R-CQI-4415060-2 AUR62021243 [plasma membrane] R-CQI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-3899351 Abscisic acid (ABA) mediated signaling none Chenopodium quinoa AUR62021243 R-CQI-4415065-2 phospho-AUR62021243 [plasma membrane] R-CQI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-3899351 Abscisic acid (ABA) mediated signaling none Chenopodium quinoa AUR62021270 R-CQI-1124757 AUR62021270 [cytosol] R-CQI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119465 Sucrose biosynthesis none Chenopodium quinoa AUR62021270 R-CQI-1124757 AUR62021270 [cytosol] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62021529 R-CQI-9639171 AUR62021529 [plant-type vacuole membrane] R-CQI-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639136 Response to Aluminum stress none Chenopodium quinoa AUR62021540 R-CQI-9826682-2 AUR62021540 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62021554 R-CQI-9645944-2 AUR62021554 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62021575 R-CQI-1128178-2 AUR62021575 [cytosol] R-CQI-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119322 Leucodelphinidin biosynthesis none Chenopodium quinoa AUR62021575 R-CQI-1128178-2 AUR62021575 [cytosol] R-CQI-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Chenopodium quinoa AUR62021575 R-CQI-9609575-2 AUR62021575 [endoplasmic reticulum membrane] R-CQI-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9609573 Tricin biosynthesis none Chenopodium quinoa AUR62021590 R-CQI-9681886-2 AUR62021590 [cytosol] R-CQI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119574 UDP-L-arabinose biosynthesis and transport none Chenopodium quinoa AUR62021628 R-CQI-5655070 AUR62021628 [Golgi lumen] R-CQI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5655101 Xyloglucan biosynthesis none Chenopodium quinoa AUR62021629 R-CQI-5655070-6 AUR62021629 [Golgi lumen] R-CQI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5655101 Xyloglucan biosynthesis none Chenopodium quinoa AUR62021636 R-CQI-8933833-2 AUR62021636 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62021636 R-CQI-8933833-2 AUR62021636 [nucleoplasm] R-CQI-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9928995 Drought escape (DE) via ABA-dependent pathway none Chenopodium quinoa AUR62021648 R-CQI-1122934-2 AUR62021648 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62021652 R-CQI-9766876 AUR62021652 [nucleoplasm] R-CQI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9766881 TF network involved in salinity response none Chenopodium quinoa AUR62021652 R-CQI-9766876 AUR62021652 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62021660 R-CQI-1123596-2 AUR62021660 [plastid stroma] R-CQI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119509 Histidine biosynthesis I none Chenopodium quinoa AUR62021672 R-CQI-1122261-2 AUR62021672 [plastid stroma] R-CQI-1119602 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119602 Phytyl-PP biosynthesis none Chenopodium quinoa AUR62021672 R-CQI-1122261-2 AUR62021672 [plastid stroma] R-CQI-1119605 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119605 Chlorophyll a biosynthesis II none Chenopodium quinoa AUR62021708 R-CQI-1127173-3 AUR62021708 [cytosol] R-CQI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119540 Leucine biosynthesis none Chenopodium quinoa AUR62021730 R-CQI-1124037 AUR62021730 [mitochondrial matrix] R-CQI-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119289 Arginine degradation none Chenopodium quinoa AUR62021747 R-CQI-9826597 AUR62021747 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62021790 R-CQI-1125610 AUR62021790 [cytosol] R-CQI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119276 Choline biosynthesis III none Chenopodium quinoa AUR62021793 R-CQI-1125610-2 AUR62021793 [cytosol] R-CQI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119276 Choline biosynthesis III none Chenopodium quinoa AUR62021803 R-CQI-1130006-2 AUR62021803 [plastid stroma] R-CQI-1119569 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119569 Kievitone biosynthesis none Chenopodium quinoa AUR62021804 R-CQI-1127491 AUR62021804 [chloroplast] R-CQI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119312 Photorespiration none Chenopodium quinoa AUR62021842 R-CQI-9639016 AUR62021842 [cytosol] R-CQI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119410 Ascorbate biosynthesis none Chenopodium quinoa AUR62021842 R-CQI-9639016 AUR62021842 [cytosol] R-CQI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119434 Phytic acid biosynthesis (lipid-independent) none Chenopodium quinoa AUR62021869 R-CQI-1122849 AUR62021869 [mitochondrion] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62021890 R-CQI-8933714-2 AUR62021890 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62021892 R-CQI-1122827 AUR62021892 [cytosol] R-CQI-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119334 Ethylene biosynthesis from methionine none Chenopodium quinoa AUR62021926 R-CQI-1128606 AUR62021926 [mitochondrial matrix] R-CQI-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119365 Lysine degradation II none Chenopodium quinoa AUR62021926 R-CQI-1173244 AUR62021926 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62021943 R-CQI-1127243-2 AUR62021943 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62021943 R-CQI-9918268 soluble Starch Synthase (SSIIIA/SSIII-2) [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62021978 R-CQI-1127999 AUR62021978 [mitochondrial inner membrane] R-CQI-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119260 Cardiolipin biosynthesis none Chenopodium quinoa AUR62021989 R-CQI-9918175-2 AUR62021989 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62022015 R-CQI-1128069 AUR62022015 [cytosol] R-CQI-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Chenopodium quinoa AUR62022015 R-CQI-1128069 AUR62022015 [cytosol] R-CQI-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Chenopodium quinoa AUR62022018 R-CQI-9916124 OsPRX95 [extracellular region] R-CQI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119403 Removal of superoxide radicals none Chenopodium quinoa AUR62022018 R-CQI-9916124 OsPRX95 [extracellular region] R-CQI-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9607185 Generation of superoxide radicals none Chenopodium quinoa AUR62022323 R-CQI-9675860 AUR62022323 [nucleoplasm] R-CQI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675824 DNA replication Initiation none Chenopodium quinoa AUR62022333 R-CQI-5606521 AUR62022333 [plastid stroma] R-CQI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119419 Lysine biosynthesis VI none Chenopodium quinoa AUR62022334 R-CQI-8858063-2 AUR62022334 [plasma membrane] R-CQI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8858053 Polar auxin transport none Chenopodium quinoa AUR62022336 R-CQI-5606521-3 AUR62022336 [plastid stroma] R-CQI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119419 Lysine biosynthesis VI none Chenopodium quinoa AUR62022411 R-CQI-5654911 AUR62022411 [Golgi lumen] R-CQI-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5654909 Xylan biosynthesis none Chenopodium quinoa AUR62022424 R-CQI-1124249-3 AUR62022424 [cytosol] R-CQI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119428 GDP-D-rhamnose biosynthesis none Chenopodium quinoa AUR62022424 R-CQI-1124249-3 AUR62022424 [cytosol] R-CQI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Chenopodium quinoa AUR62022425 R-CQI-1124249-2 AUR62022425 [cytosol] R-CQI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119428 GDP-D-rhamnose biosynthesis none Chenopodium quinoa AUR62022425 R-CQI-1124249-2 AUR62022425 [cytosol] R-CQI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Chenopodium quinoa AUR62022427 R-CQI-9640701 AUR62022427 [nucleoplasm] R-CQI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640882 Assembly of pre-replication complex none Chenopodium quinoa AUR62022427 R-CQI-9640701 AUR62022427 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62022458 R-CQI-4827040 AUR62022458 [plastid stroma] R-CQI-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-4827054 Tetrapyrrole biosynthesis I none Chenopodium quinoa AUR62022551 R-CQI-1125834-2 AUR62022551 [cytosol] R-CQI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119379 Flavin biosynthesis none Chenopodium quinoa AUR62022580 R-CQI-9640694 AUR62022580 [nucleoplasm] R-CQI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640882 Assembly of pre-replication complex none Chenopodium quinoa AUR62022580 R-CQI-9640694 AUR62022580 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62022599 R-CQI-1129311-3 AUR62022599 [cytosol] R-CQI-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Chenopodium quinoa AUR62022615 R-CQI-1129892-2 AUR62022615 [cytosol] R-CQI-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119334 Ethylene biosynthesis from methionine none Chenopodium quinoa AUR62022615 R-CQI-1129892-2 AUR62022615 [cytosol] R-CQI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119624 Methionine salvage pathway none Chenopodium quinoa AUR62022619 R-CQI-1129411-2 AUR62022619 [cytosol] R-CQI-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119496 Pantothenate biosynthesis I none Chenopodium quinoa AUR62022619 R-CQI-1129411-2 AUR62022619 [cytosol] R-CQI-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119544 Pantothenate biosynthesis II none Chenopodium quinoa AUR62022677 R-CQI-8933784-2 AUR62022677 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62022683 R-CQI-8933759-2 AUR62022683 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62022704 R-CQI-9675481-2 AUR62022704 [cytosol] R-CQI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030654 Primary root development none Chenopodium quinoa AUR62022807 R-CQI-1123470 AUR62022807 [cytosol] R-CQI-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119292 Cytokinins 7-N-glucoside biosynthesis none Chenopodium quinoa AUR62022807 R-CQI-1123470 AUR62022807 [cytosol] R-CQI-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119375 Cytokinins 9-N-glucoside biosynthesis none Chenopodium quinoa AUR62022807 R-CQI-1123470 AUR62022807 [cytosol] R-CQI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119473 Cytokinins-O-glucoside biosynthesis none Chenopodium quinoa AUR62022808 R-CQI-1123470-5 AUR62022808 [cytosol] R-CQI-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119292 Cytokinins 7-N-glucoside biosynthesis none Chenopodium quinoa AUR62022808 R-CQI-1123470-5 AUR62022808 [cytosol] R-CQI-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119375 Cytokinins 9-N-glucoside biosynthesis none Chenopodium quinoa AUR62022808 R-CQI-1123470-5 AUR62022808 [cytosol] R-CQI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119473 Cytokinins-O-glucoside biosynthesis none Chenopodium quinoa AUR62022809 R-CQI-1123470-2 AUR62022809 [cytosol] R-CQI-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119292 Cytokinins 7-N-glucoside biosynthesis none Chenopodium quinoa AUR62022809 R-CQI-1123470-2 AUR62022809 [cytosol] R-CQI-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119375 Cytokinins 9-N-glucoside biosynthesis none Chenopodium quinoa AUR62022809 R-CQI-1123470-2 AUR62022809 [cytosol] R-CQI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119473 Cytokinins-O-glucoside biosynthesis none Chenopodium quinoa AUR62022814 R-CQI-1123470-3 AUR62022814 [cytosol] R-CQI-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119292 Cytokinins 7-N-glucoside biosynthesis none Chenopodium quinoa AUR62022814 R-CQI-1123470-3 AUR62022814 [cytosol] R-CQI-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119375 Cytokinins 9-N-glucoside biosynthesis none Chenopodium quinoa AUR62022814 R-CQI-1123470-3 AUR62022814 [cytosol] R-CQI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119473 Cytokinins-O-glucoside biosynthesis none Chenopodium quinoa AUR62022825 R-CQI-9681885-3 AUR62022825 [Golgi membrane] R-CQI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119574 UDP-L-arabinose biosynthesis and transport none Chenopodium quinoa AUR62022835 R-CQI-5149683 AUR62022835 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62022838 R-CQI-6787181 AUR62022838 [cytosol] R-CQI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6787011 Jasmonic acid signaling none Chenopodium quinoa AUR62022861 R-CQI-8858070 AUR62022861 [plasma membrane] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62022879 R-CQI-9675293 AUR62022879 [nucleoplasm] R-CQI-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030557 Lateral root initiation none Chenopodium quinoa AUR62022889 R-CQI-5654797 AUR62022889 [nucleoplasm] R-CQI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5654828 Strigolactone signaling none Chenopodium quinoa AUR62022893 R-CQI-1129723-2 AUR62022893 [chloroplast] R-CQI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119494 Tryptophan biosynthesis none Chenopodium quinoa AUR62022894 R-CQI-1129616-2 AUR62022894 [cytosol] R-CQI-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119300 Glycolipid desaturation none Chenopodium quinoa AUR62022895 R-CQI-1129616 AUR62022895 [cytosol] R-CQI-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119300 Glycolipid desaturation none Chenopodium quinoa AUR62022939 R-CQI-8987483 AUR62022939 [mitochondrial matrix] R-CQI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119312 Photorespiration none Chenopodium quinoa AUR62022952 R-CQI-9930201 DREB2A [nucleoplasm] R-CQI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9766881 TF network involved in salinity response none Chenopodium quinoa AUR62022970 R-CQI-8987488 AUR62022970 [mitochondrial matrix] R-CQI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119312 Photorespiration none Chenopodium quinoa AUR62023244 R-CQI-1125540 AUR62023244 [cytosol] R-CQI-1119303 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119303 Pyridoxamine anabolism none Chenopodium quinoa AUR62023244 R-CQI-1125540 AUR62023244 [cytosol] R-CQI-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119534 Pyridoxal 5'-phosphate salvage pathway none Chenopodium quinoa AUR62023255 R-CQI-8868990-2 AUR62023255 [endoplasmic reticulum membrane] R-CQI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8868949 Intracellular auxin transport none Chenopodium quinoa AUR62023298 R-CQI-1126531-2 AUR62023298 [cytosol] R-CQI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119410 Ascorbate biosynthesis none Chenopodium quinoa AUR62023298 R-CQI-1126531-2 AUR62023298 [cytosol] R-CQI-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119628 GDP-mannose metabolism none Chenopodium quinoa AUR62023307 R-CQI-8987531 AUR62023307 [chloroplast] R-CQI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119312 Photorespiration none Chenopodium quinoa AUR62023307 R-CQI-1125951-3 AUR62023307 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62023308 R-CQI-8987531-7 AUR62023308 [chloroplast] R-CQI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119312 Photorespiration none Chenopodium quinoa AUR62023308 R-CQI-1125951-7 AUR62023308 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62023310 R-CQI-8987531-5 AUR62023310 [chloroplast] R-CQI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119312 Photorespiration none Chenopodium quinoa AUR62023310 R-CQI-1125951-5 AUR62023310 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62023313 R-CQI-2730728-2 AUR62023313 [cytosol] R-CQI-1119413 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119413 Trans-zeatin biosynthesis none Chenopodium quinoa AUR62023322 R-CQI-1129282 AUR62023322 [cytosol] R-CQI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119428 GDP-D-rhamnose biosynthesis none Chenopodium quinoa AUR62023322 R-CQI-1129282 AUR62023322 [cytosol] R-CQI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Chenopodium quinoa AUR62023338 R-CQI-1125766-6 AUR62023338 [cytosol] R-CQI-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119557 GA12 biosynthesis none Chenopodium quinoa AUR62023339 R-CQI-1125766-2 AUR62023339 [cytosol] R-CQI-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119557 GA12 biosynthesis none Chenopodium quinoa AUR62023342 R-CQI-9025230 AUR62023342 [peroxisomal matrix] R-CQI-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119407 Ureide biosynthesis none Chenopodium quinoa AUR62023348 R-CQI-1124520-2 AUR62023348 [cytosol] R-CQI-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119278 PRPP biosynthesis I none Chenopodium quinoa AUR62023352 R-CQI-9675878 AUR62023352 [nucleoplasm] R-CQI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675782 Maturation none Chenopodium quinoa AUR62023359 R-CQI-5146760 AUR62023359 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62023364 R-CQI-1123819-3 AUR62023364 [plastid stroma] R-CQI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119464 Methylerythritol phosphate pathway none Chenopodium quinoa AUR62023383 R-CQI-8933728-4 AUR62023383 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62023440 R-CQI-1125670-2 AUR62023440 [cytosol] R-CQI-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119393 Asparagine degradation I none Chenopodium quinoa AUR62023443 R-CQI-5146758 AUR62023443 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62023447 R-CQI-9675365 AUR62023447 [nucleoplasm] R-CQI-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675508 Root elongation none Chenopodium quinoa AUR62023449 R-CQI-6787066 AUR62023449 [nucleoplasm] R-CQI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6787011 Jasmonic acid signaling none Chenopodium quinoa AUR62023484 R-CQI-9826647-2 AUR62023484 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62023490 R-CQI-6787202 AUR62023490 [cytosol] R-CQI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6787011 Jasmonic acid signaling none Chenopodium quinoa AUR62023491 R-CQI-6787184-2 AUR62023491 [cytosol] R-CQI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6787011 Jasmonic acid signaling none Chenopodium quinoa AUR62023494 R-CQI-8933788 AUR62023494 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62023572 R-CQI-1125447-2 AUR62023572 [plastid stroma] R-CQI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119509 Histidine biosynthesis I none Chenopodium quinoa AUR62023601 R-CQI-5608213 AUR62023601 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62023604 R-CQI-1128319-2 AUR62023604 [cytosol] R-CQI-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119341 Galactosylcyclitol biosynthesis none Chenopodium quinoa AUR62023605 R-CQI-9626449-2 AUR62023605 [cytosol] R-CQI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9626305 Regulatory network of nutrient accumulation none Chenopodium quinoa AUR62023616 R-CQI-1130304-2 AUR62023616 [cytosol] R-CQI-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119291 Nitrate assimilation none Chenopodium quinoa AUR62023669 R-CQI-1129914-2 AUR62023669 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62023691 R-CQI-1128613-4 AUR62023691 [cytosol] R-CQI-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119316 Phenylpropanoid biosynthesis none Chenopodium quinoa AUR62023693 R-CQI-1123563-2 AUR62023693 [cytosol] R-CQI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119379 Flavin biosynthesis none Chenopodium quinoa AUR62023707 R-CQI-9639010 AUR62023707 [cytosol] R-CQI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119434 Phytic acid biosynthesis (lipid-independent) none Chenopodium quinoa AUR62023742 R-CQI-1124523 AUR62023742 [cytosol] R-CQI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119460 Isoleucine biosynthesis from threonine none Chenopodium quinoa AUR62023742 R-CQI-1124523 AUR62023742 [cytosol] R-CQI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119600 Valine biosynthesis none Chenopodium quinoa AUR62023765 R-CQI-9639789-3 AUR62023765 [plasma membrane] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62023768 R-CQI-9675391-2 AUR62023768 [nucleoplasm] R-CQI-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675508 Root elongation none Chenopodium quinoa AUR62023771 R-CQI-1127173 AUR62023771 [cytosol] R-CQI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119540 Leucine biosynthesis none Chenopodium quinoa AUR62023779 R-CQI-1122545-2 AUR62023779 [cytosol] R-CQI-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119331 Cysteine biosynthesis I none Chenopodium quinoa AUR62023853 R-CQI-1125989 AUR62023853 [cytosol] R-CQI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119438 Secologanin and strictosidine biosynthesis none Chenopodium quinoa AUR62023885 R-CQI-2685730 AUR62023885 [cytosol] R-CQI-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119580 IAA biosynthesis II none Chenopodium quinoa AUR62023910 R-CQI-5632264-2 AUR62023910 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62023915 R-CQI-9025430-2 AUR62023915 [endoplasmic reticulum membrane] R-CQI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119325 Sphingolipid metabolism none Chenopodium quinoa AUR62023966 R-CQI-1124560-2 AUR62023966 [cytosol] R-CQI-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119563 UDP-D-xylose biosynthesis none Chenopodium quinoa AUR62023966 R-CQI-9681903-2 AUR62023966 [Golgi lumen] R-CQI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119574 UDP-L-arabinose biosynthesis and transport none Chenopodium quinoa AUR62023966 R-CQI-1124560-2 AUR62023966 [cytosol] R-CQI-5654894 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5654894 UDP-D-apiose biosynthesis none Chenopodium quinoa AUR62024020 R-CQI-1128902 AUR62024020 [cytosol] R-CQI-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119271 Threonine degradation none Chenopodium quinoa AUR62024020 R-CQI-1128902 AUR62024020 [cytosol] R-CQI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119486 IAA biosynthesis I none Chenopodium quinoa AUR62024020 R-CQI-9658656 AUR62024020 [cytosol] R-CQI-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119567 Beta-alanine biosynthesis I none Chenopodium quinoa AUR62024050 R-CQI-1127442 AUR62024050 [cytosol] R-CQI-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119281 Aspartate biosynthesis I none Chenopodium quinoa AUR62024050 R-CQI-5632001 AUR62024050 [plastid stroma] R-CQI-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119553 Asparagine biosynthesis none Chenopodium quinoa AUR62024113 R-CQI-9638999-3 AUR62024113 [cytosol] R-CQI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119434 Phytic acid biosynthesis (lipid-independent) none Chenopodium quinoa AUR62024129 R-CQI-9675500 AUR62024129 [endoplasmic reticulum membrane] R-CQI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030654 Primary root development none Chenopodium quinoa AUR62024148 R-CQI-4752547 AUR62024148 [plastid stroma] R-CQI-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119498 Phylloquinone biosynthesis none Chenopodium quinoa AUR62024162 R-CQI-9645947-2 AUR62024162 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62024162 R-CQI-9645947-2 AUR62024162 [nucleoplasm] R-CQI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675782 Maturation none Chenopodium quinoa AUR62024162 R-CQI-9645947-2 AUR62024162 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62024162 R-CQI-9645947-2 AUR62024162 [nucleoplasm] R-CQI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675824 DNA replication Initiation none Chenopodium quinoa AUR62024162 R-CQI-9645947-2 AUR62024162 [nucleoplasm] R-CQI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675885 Lagging strand synthesis none Chenopodium quinoa AUR62024167 R-CQI-1122785-2 AUR62024167 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62024167 R-CQI-1126726-2 AUR62024167 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62024167 R-CQI-1122785-2 AUR62024167 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62024167 R-CQI-1126726-2 AUR62024167 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62024167 R-CQI-1122785-2 AUR62024167 [cytosol] R-CQI-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119570 Cytosolic glycolysis none Chenopodium quinoa AUR62024176 R-CQI-5632129 AUR62024176 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62024246 R-CQI-1127353-2 AUR62024246 [cytosol] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62024257 R-CQI-4723690 AUR62024257 [plastid stroma] R-CQI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119464 Methylerythritol phosphate pathway none Chenopodium quinoa AUR62024289 R-CQI-9658676 AUR62024289 [cytosol] R-CQI-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119567 Beta-alanine biosynthesis I none Chenopodium quinoa AUR62024293 R-CQI-8987548-2 AUR62024293 [peroxisomal matrix] R-CQI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119312 Photorespiration none Chenopodium quinoa AUR62024295 R-CQI-1127753 AUR62024295 [cytosol] R-CQI-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119278 PRPP biosynthesis I none Chenopodium quinoa AUR62024296 R-CQI-1130162-2 AUR62024296 [chloroplast] R-CQI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119494 Tryptophan biosynthesis none Chenopodium quinoa AUR62024299 R-CQI-1126549-4 AUR62024299 [cytosol] R-CQI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119486 IAA biosynthesis I none Chenopodium quinoa AUR62024564 R-CQI-1128366 AUR62024564 [cytosol] R-CQI-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119334 Ethylene biosynthesis from methionine none Chenopodium quinoa AUR62024564 R-CQI-1128366 AUR62024564 [cytosol] R-CQI-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119501 S-adenosyl-L-methionine cycle none Chenopodium quinoa AUR62024564 R-CQI-1128366 AUR62024564 [cytosol] R-CQI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119624 Methionine salvage pathway none Chenopodium quinoa AUR62024564 R-CQI-9025738 AUR62024564 [cytosol] R-CQI-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025754 Mugineic acid biosynthesis none Chenopodium quinoa AUR62024658 R-CQI-9640745 AUR62024658 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62024658 R-CQI-9640745 AUR62024658 [nucleoplasm] R-CQI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675824 DNA replication Initiation none Chenopodium quinoa AUR62024977 R-CQI-9618056-2 AUR62024977 [plasma membrane] R-CQI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9618218 Arsenic uptake and detoxification none Chenopodium quinoa AUR62024986 R-CQI-1129846-2 AUR62024986 [mitochondrion] R-CQI-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119337 Proline degradation none Chenopodium quinoa AUR62024986 R-CQI-1129846-2 AUR62024986 [mitochondrion] R-CQI-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119458 Glutamate degradation none Chenopodium quinoa AUR62024990 R-CQI-1124778 AUR62024990 [plastid stroma] R-CQI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119464 Methylerythritol phosphate pathway none Chenopodium quinoa AUR62025007 R-CQI-9611863 AUR62025007 [mitochondrial matrix] R-CQI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119479 Valine degradation none Chenopodium quinoa AUR62025029 R-CQI-9025513-2 AUR62025029 [endoplasmic reticulum membrane] R-CQI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119325 Sphingolipid metabolism none Chenopodium quinoa AUR62025029 R-CQI-1129700-2 AUR62025029 [cytosol] R-CQI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119610 Biotin biosynthesis II none Chenopodium quinoa AUR62025034 R-CQI-1126883-2 AUR62025034 [cytosol] R-CQI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119389 Phenylalanine biosynthesis I none Chenopodium quinoa AUR62025035 R-CQI-1126883 AUR62025035 [cytosol] R-CQI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119389 Phenylalanine biosynthesis I none Chenopodium quinoa AUR62025038 R-CQI-8854121-4 AUR62025038 [cytosol] R-CQI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119556 Choline biosynthesis I none Chenopodium quinoa AUR62025042 R-CQI-9675423-2 AUR62025042 [nucleoplasm] R-CQI-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675508 Root elongation none Chenopodium quinoa AUR62025042 R-CQI-9930290-2 MPK5 [nucleoplasm] R-CQI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9766881 TF network involved in salinity response none Chenopodium quinoa AUR62025068 R-CQI-9927865 AUR62025068 [nucleoplasm] R-CQI-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8934257 Transition from vegetative to reproductive shoot apical meristem none Chenopodium quinoa AUR62025071 R-CQI-1122601-2 AUR62025071 [mitochondrial inner membrane] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62025100 R-CQI-1127443-2 AUR62025100 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62025100 R-CQI-1122818-2 AUR62025100 [cytosol] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62025109 R-CQI-4415101-4 AUR62025109 [cytosol] R-CQI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-3899351 Abscisic acid (ABA) mediated signaling none Chenopodium quinoa AUR62025109 R-CQI-4415101-4 AUR62025109 [cytosol] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62025110 R-CQI-4415101 AUR62025110 [cytosol] R-CQI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-3899351 Abscisic acid (ABA) mediated signaling none Chenopodium quinoa AUR62025110 R-CQI-4415101 AUR62025110 [cytosol] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62025133 R-CQI-1128973-2 AUR62025133 [cytosol] R-CQI-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Chenopodium quinoa AUR62025133 R-CQI-1128973-2 AUR62025133 [cytosol] R-CQI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119438 Secologanin and strictosidine biosynthesis none Chenopodium quinoa AUR62025133 R-CQI-1128973-2 AUR62025133 [cytosol] R-CQI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119486 IAA biosynthesis I none Chenopodium quinoa AUR62025155 R-CQI-1124291-2 AUR62025155 [cytosol] R-CQI-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Chenopodium quinoa AUR62025155 R-CQI-1124291-2 AUR62025155 [cytosol] R-CQI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119438 Secologanin and strictosidine biosynthesis none Chenopodium quinoa AUR62025155 R-CQI-1124291-2 AUR62025155 [cytosol] R-CQI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119486 IAA biosynthesis I none Chenopodium quinoa AUR62025196 R-CQI-1130153 AUR62025196 [cytosol] R-CQI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119332 Jasmonic acid biosynthesis none Chenopodium quinoa AUR62025196 R-CQI-6787115 AUR62025196 [nucleoplasm] R-CQI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6787011 Jasmonic acid signaling none Chenopodium quinoa AUR62025238 R-CQI-1126892 AUR62025238 [cytosol] R-CQI-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119353 Linear furanocoumarin biosynthesis none Chenopodium quinoa AUR62025260 R-CQI-1123534-2 AUR62025260 [cytosol] R-CQI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119438 Secologanin and strictosidine biosynthesis none Chenopodium quinoa AUR62025268 R-CQI-5084918-3 AUR62025268 [cytosol] R-CQI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119624 Methionine salvage pathway none Chenopodium quinoa AUR62025269 R-CQI-5084918-6 AUR62025269 [cytosol] R-CQI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119624 Methionine salvage pathway none Chenopodium quinoa AUR62025270 R-CQI-5084918-4 AUR62025270 [cytosol] R-CQI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119624 Methionine salvage pathway none Chenopodium quinoa AUR62025282 R-CQI-5608125 AUR62025282 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62025301 R-CQI-9607102-2 AUR62025301 [mitochondrion] R-CQI-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9607185 Generation of superoxide radicals none Chenopodium quinoa AUR62025310 R-CQI-1129561-2 AUR62025310 [cytosol] R-CQI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119452 Galactose degradation II none Chenopodium quinoa AUR62025310 R-CQI-1129561-2 AUR62025310 [cytosol] R-CQI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119465 Sucrose biosynthesis none Chenopodium quinoa AUR62025328 R-CQI-1129571-2 AUR62025328 [mitochondrion] R-CQI-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119365 Lysine degradation II none Chenopodium quinoa AUR62025331 R-CQI-6788201 AUR62025331 [nucleoplasm] R-CQI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6788019 Salicylic acid signaling none Chenopodium quinoa AUR62025349 R-CQI-1124334-2 AUR62025349 [plasma membrane] R-CQI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119314 Cellulose biosynthesis none Chenopodium quinoa AUR62025384 R-CQI-1125014-2 AUR62025384 [cytosol] R-CQI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Chenopodium quinoa AUR62025385 R-CQI-1122932 AUR62025385 [cytosol] R-CQI-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119317 Spermine biosynthesis none Chenopodium quinoa AUR62025385 R-CQI-1122932 AUR62025385 [cytosol] R-CQI-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119343 Spermidine biosynthesis none Chenopodium quinoa AUR62025385 R-CQI-1122932 AUR62025385 [cytosol] R-CQI-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119446 Lysine degradation I none Chenopodium quinoa AUR62025385 R-CQI-5654765 AUR62025385 [cytosol] R-CQI-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119446 Lysine degradation I none Chenopodium quinoa AUR62025417 R-CQI-1128327 AUR62025417 [cytosol] R-CQI-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119267 Phenylalanine degradation III none Chenopodium quinoa AUR62025428 R-CQI-1122881 AUR62025428 [cytosol] R-CQI-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Chenopodium quinoa AUR62025428 R-CQI-1122881 AUR62025428 [cytosol] R-CQI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119438 Secologanin and strictosidine biosynthesis none Chenopodium quinoa AUR62025428 R-CQI-1122881 AUR62025428 [cytosol] R-CQI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119486 IAA biosynthesis I none Chenopodium quinoa AUR62025435 R-CQI-5655057 AUR62025435 [Golgi lumen] R-CQI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5655101 Xyloglucan biosynthesis none Chenopodium quinoa AUR62025439 R-CQI-1128385 AUR62025439 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62025448 R-CQI-1128528 AUR62025448 [plasma membrane] R-CQI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119314 Cellulose biosynthesis none Chenopodium quinoa AUR62025500 R-CQI-1123894-2 AUR62025500 [plasma membrane] R-CQI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119314 Cellulose biosynthesis none Chenopodium quinoa AUR62025515 R-CQI-1126830-2 AUR62025515 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62025519 R-CQI-9675877 AUR62025519 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62025532 R-CQI-1126115-2 AUR62025532 [cytosol] R-CQI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119452 Galactose degradation II none Chenopodium quinoa AUR62025532 R-CQI-1126115-2 AUR62025532 [cytosol] R-CQI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119465 Sucrose biosynthesis none Chenopodium quinoa AUR62025548 R-CQI-1130032 AUR62025548 [mitochondrial inner membrane] R-CQI-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119260 Cardiolipin biosynthesis none Chenopodium quinoa AUR62025637 R-CQI-1129390 AUR62025637 [mitochondrion] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62025651 R-CQI-1126034-2 AUR62025651 [cytosol] R-CQI-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119534 Pyridoxal 5'-phosphate salvage pathway none Chenopodium quinoa AUR62025651 R-CQI-1126034-2 AUR62025651 [cytosol] R-CQI-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119594 Pyridoxal 5'-phosphate biosynthesis none Chenopodium quinoa AUR62025664 R-CQI-1123867-2 AUR62025664 [cytosol] R-CQI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119370 Sterol biosynthesis none Chenopodium quinoa AUR62025708 R-CQI-1125910 AUR62025708 [plastid stroma] R-CQI-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119367 Polyisoprenoid biosynthesis none Chenopodium quinoa AUR62025991 R-CQI-1128126 AUR62025991 [endosome] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62025991 R-CQI-5679348 AUR62025991 [plasma membrane] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62025993 R-CQI-1130036-2 AUR62025993 [endoplasmic reticulum membrane] R-CQI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119402 Phospholipid biosynthesis I none Chenopodium quinoa AUR62026023 R-CQI-2885386 AUR62026023 [cytosol] R-CQI-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119417 Stachyose biosynthesis none Chenopodium quinoa AUR62026024 R-CQI-1123087 AUR62026024 [plasma membrane] R-CQI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119314 Cellulose biosynthesis none Chenopodium quinoa AUR62026048 R-CQI-9675464 AUR62026048 [nucleoplasm] R-CQI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030654 Primary root development none Chenopodium quinoa AUR62026052 R-CQI-6787864 AUR62026052 [nucleoplasm] R-CQI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6788019 Salicylic acid signaling none Chenopodium quinoa AUR62026121 R-CQI-1129311-2 AUR62026121 [cytosol] R-CQI-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Chenopodium quinoa AUR62026164 R-CQI-1127087 AUR62026164 [cytosol] R-CQI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119438 Secologanin and strictosidine biosynthesis none Chenopodium quinoa AUR62026165 R-CQI-1127087-2 AUR62026165 [cytosol] R-CQI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119438 Secologanin and strictosidine biosynthesis none Chenopodium quinoa AUR62026210 R-CQI-1130348 AUR62026210 [cytosol] R-CQI-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Chenopodium quinoa AUR62026260 R-CQI-1126354-6 AUR62026260 [cytosol] R-CQI-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119513 Pinobanksin biosynthesis none Chenopodium quinoa AUR62026260 R-CQI-1126354-6 AUR62026260 [cytosol] R-CQI-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119531 Flavonoid biosynthesis none Chenopodium quinoa AUR62026260 R-CQI-1126354-6 AUR62026260 [cytosol] R-CQI-1119630 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119630 Resveratrol biosynthesis none Chenopodium quinoa AUR62026272 R-CQI-1126354-7 AUR62026272 [cytosol] R-CQI-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119513 Pinobanksin biosynthesis none Chenopodium quinoa AUR62026272 R-CQI-1126354-7 AUR62026272 [cytosol] R-CQI-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119531 Flavonoid biosynthesis none Chenopodium quinoa AUR62026272 R-CQI-1126354-7 AUR62026272 [cytosol] R-CQI-1119630 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119630 Resveratrol biosynthesis none Chenopodium quinoa AUR62026359 R-CQI-1124234 AUR62026359 [cytosol] R-CQI-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119436 Peptidoglycan biosynthesis I none Chenopodium quinoa AUR62026369 R-CQI-1129539-2 AUR62026369 [cytosol] R-CQI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119610 Biotin biosynthesis II none Chenopodium quinoa AUR62026384 R-CQI-1130348-2 AUR62026384 [cytosol] R-CQI-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Chenopodium quinoa AUR62026452 R-CQI-1126354-3 AUR62026452 [cytosol] R-CQI-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119513 Pinobanksin biosynthesis none Chenopodium quinoa AUR62026452 R-CQI-1126354-3 AUR62026452 [cytosol] R-CQI-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119531 Flavonoid biosynthesis none Chenopodium quinoa AUR62026452 R-CQI-1126354-3 AUR62026452 [cytosol] R-CQI-1119630 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119630 Resveratrol biosynthesis none Chenopodium quinoa AUR62026461 R-CQI-1126354-5 AUR62026461 [cytosol] R-CQI-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119513 Pinobanksin biosynthesis none Chenopodium quinoa AUR62026461 R-CQI-1126354-5 AUR62026461 [cytosol] R-CQI-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119531 Flavonoid biosynthesis none Chenopodium quinoa AUR62026461 R-CQI-1126354-5 AUR62026461 [cytosol] R-CQI-1119630 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119630 Resveratrol biosynthesis none Chenopodium quinoa AUR62026540 R-CQI-5632120 AUR62026540 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62026993 R-CQI-1128200 AUR62026993 [cytosol] R-CQI-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119316 Phenylpropanoid biosynthesis none Chenopodium quinoa AUR62026996 R-CQI-6787933 AUR62026996 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62027020 R-CQI-9639111 AUR62027020 [plasma membrane] R-CQI-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639136 Response to Aluminum stress none Chenopodium quinoa AUR62027029 R-CQI-9639029 AUR62027029 [cytosol] R-CQI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119434 Phytic acid biosynthesis (lipid-independent) none Chenopodium quinoa AUR62027065 R-CQI-9682527 AUR62027065 [cytosol] R-CQI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119410 Ascorbate biosynthesis none Chenopodium quinoa AUR62027092 R-CQI-1126269-3 AUR62027092 [mitochondrial matrix] R-CQI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119479 Valine degradation none Chenopodium quinoa AUR62027094 R-CQI-1126269-2 AUR62027094 [mitochondrial matrix] R-CQI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119479 Valine degradation none Chenopodium quinoa AUR62027100 R-CQI-3230566 AUR62027100 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62027106 R-CQI-2685732 AUR62027106 [cytosol] R-CQI-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119580 IAA biosynthesis II none Chenopodium quinoa AUR62027107 R-CQI-1123575-2 AUR62027107 [cytosol] R-CQI-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119297 Beta-alanine biosynthesis III none Chenopodium quinoa AUR62027116 R-CQI-1128980-2 AUR62027116 [cytosol] R-CQI-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119586 Cyanate degradation none Chenopodium quinoa AUR62027128 R-CQI-1130141-5 AUR62027128 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62027128 R-CQI-1130141-5 AUR62027128 [mitochondrial matrix] R-CQI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119540 Leucine biosynthesis none Chenopodium quinoa AUR62027131 R-CQI-1130141-3 AUR62027131 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62027131 R-CQI-1130141-3 AUR62027131 [mitochondrial matrix] R-CQI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119540 Leucine biosynthesis none Chenopodium quinoa AUR62027140 R-CQI-1125494-2 AUR62027140 [endoplasmic reticulum membrane] R-CQI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119402 Phospholipid biosynthesis I none Chenopodium quinoa AUR62027142 R-CQI-1127357-2 AUR62027142 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62027142 R-CQI-1127357-2 AUR62027142 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62027145 R-CQI-1127357-3 AUR62027145 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62027145 R-CQI-1127357-3 AUR62027145 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62027149 R-CQI-5632232-2 phospho-AUR62027149 [plasma membrane] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62027179 R-CQI-5632192-3 AUR62027179 [cytosol] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62027180 R-CQI-9640777-3 AUR62027180 [nucleoplasm] R-CQI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640760 G1 phase none Chenopodium quinoa AUR62027180 R-CQI-9640777-3 AUR62027180 [nucleoplasm] R-CQI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640887 G1/S transition none Chenopodium quinoa AUR62027216 R-CQI-9766892-2 SAPK1 [nucleoplasm] R-CQI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9766881 TF network involved in salinity response none Chenopodium quinoa AUR62027288 R-CQI-1126436-2 AUR62027288 [cytosol] R-CQI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119615 Mevalonate pathway none Chenopodium quinoa AUR62027308 R-CQI-1124742 AUR62027308 [cytosol] R-CQI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119410 Ascorbate biosynthesis none Chenopodium quinoa AUR62027308 R-CQI-1124742 AUR62027308 [cytosol] R-CQI-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119570 Cytosolic glycolysis none Chenopodium quinoa AUR62027326 R-CQI-9025739-2 AUR62027326 [plasma membrane] R-CQI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025727 Iron uptake and transport in root vascular system none Chenopodium quinoa AUR62027326 R-CQI-9025739-2 AUR62027326 [plasma membrane] R-CQI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9618218 Arsenic uptake and detoxification none Chenopodium quinoa AUR62027326 R-CQI-9025739-2 AUR62027326 [plasma membrane] R-CQI-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639136 Response to Aluminum stress none Chenopodium quinoa AUR62027327 R-CQI-9025739-3 AUR62027327 [plasma membrane] R-CQI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025727 Iron uptake and transport in root vascular system none Chenopodium quinoa AUR62027327 R-CQI-9025739-3 AUR62027327 [plasma membrane] R-CQI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9618218 Arsenic uptake and detoxification none Chenopodium quinoa AUR62027327 R-CQI-9025739-3 AUR62027327 [plasma membrane] R-CQI-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639136 Response to Aluminum stress none Chenopodium quinoa AUR62027328 R-CQI-9618135 AUR62027328 [plasma membrane] R-CQI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9618218 Arsenic uptake and detoxification none Chenopodium quinoa AUR62027440 R-CQI-8858085 AUR62027440 [plasma membrane] R-CQI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8858053 Polar auxin transport none Chenopodium quinoa AUR62027440 R-CQI-8858085 AUR62027440 [plasma membrane] R-CQI-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924494 Gravity sensing and statolith sedimentation none Chenopodium quinoa AUR62027440 R-CQI-9928298 PIN2 [endosome] R-CQI-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924494 Gravity sensing and statolith sedimentation none Chenopodium quinoa AUR62027462 R-CQI-1127015 AUR62027462 [cytosol] R-CQI-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119334 Ethylene biosynthesis from methionine none Chenopodium quinoa AUR62027462 R-CQI-1127015 AUR62027462 [cytosol] R-CQI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119624 Methionine salvage pathway none Chenopodium quinoa AUR62027480 R-CQI-1125698 AUR62027480 [cytosol] R-CQI-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119436 Peptidoglycan biosynthesis I none Chenopodium quinoa AUR62027489 R-CQI-8853988-2 Phosphatidylglycerophosphatase [mitochondrial matrix] R-CQI-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119260 Cardiolipin biosynthesis none Chenopodium quinoa AUR62027508 R-CQI-9658664 AUR62027508 [plasma membrane] R-CQI-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119567 Beta-alanine biosynthesis I none Chenopodium quinoa AUR62027516 R-CQI-1122932-4 AUR62027516 [cytosol] R-CQI-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119317 Spermine biosynthesis none Chenopodium quinoa AUR62027516 R-CQI-1122932-4 AUR62027516 [cytosol] R-CQI-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119343 Spermidine biosynthesis none Chenopodium quinoa AUR62027516 R-CQI-1122932-4 AUR62027516 [cytosol] R-CQI-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119446 Lysine degradation I none Chenopodium quinoa AUR62027516 R-CQI-5654765-4 AUR62027516 [cytosol] R-CQI-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119446 Lysine degradation I none Chenopodium quinoa AUR62027573 R-CQI-1250418-2 AUR62027573 [cytosol] R-CQI-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119374 Abscisic acid biosynthesis none Chenopodium quinoa AUR62027573 R-CQI-1129637-2 AUR62027573 [cytosol] R-CQI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119486 IAA biosynthesis I none Chenopodium quinoa AUR62027610 R-CQI-9640767 AUR62027610 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62027610 R-CQI-9640767 AUR62027610 [nucleoplasm] R-CQI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675824 DNA replication Initiation none Chenopodium quinoa AUR62027638 R-CQI-1126560 AUR62027638 [cytosol] R-CQI-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119516 Trehalose biosynthesis I none Chenopodium quinoa AUR62027645 R-CQI-1130141-4 AUR62027645 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62027645 R-CQI-1130141-4 AUR62027645 [mitochondrial matrix] R-CQI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119540 Leucine biosynthesis none Chenopodium quinoa AUR62027673 R-CQI-5632133-3 AUR62027673 [cytosol] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62027674 R-CQI-5632133-4 AUR62027674 [cytosol] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62027675 R-CQI-5632133 AUR62027675 [cytosol] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62027702 R-CQI-5632139 AUR62027702 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62027708 R-CQI-1124491 AUR62027708 [plasma membrane] R-CQI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119314 Cellulose biosynthesis none Chenopodium quinoa AUR62027766 R-CQI-8933710 AUR62027766 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62027798 R-CQI-1129934-2 AUR62027798 [plastid stroma] R-CQI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119430 Chorismate biosynthesis none Chenopodium quinoa AUR62027816 R-CQI-9918264-2 ISA3 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62027845 R-CQI-1124490-2 AUR62027845 [cytosol] R-CQI-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119534 Pyridoxal 5'-phosphate salvage pathway none Chenopodium quinoa AUR62027845 R-CQI-1124490-2 AUR62027845 [cytosol] R-CQI-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119594 Pyridoxal 5'-phosphate biosynthesis none Chenopodium quinoa AUR62027846 R-CQI-5608140 AUR62027846 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62027855 R-CQI-9640729 AUR62027855 [nucleoplasm] R-CQI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640760 G1 phase none Chenopodium quinoa AUR62027855 R-CQI-9640729 AUR62027855 [nucleoplasm] R-CQI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640887 G1/S transition none Chenopodium quinoa AUR62027857 R-CQI-5632192-2 AUR62027857 [cytosol] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62027860 R-CQI-2960195 AUR62027860 [cytosol] R-CQI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119410 Ascorbate biosynthesis none Chenopodium quinoa AUR62027860 R-CQI-2960195 AUR62027860 [cytosol] R-CQI-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119570 Cytosolic glycolysis none Chenopodium quinoa AUR62027867 R-CQI-8854121-2 AUR62027867 [cytosol] R-CQI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119556 Choline biosynthesis I none Chenopodium quinoa AUR62027868 R-CQI-8854121-6 AUR62027868 [cytosol] R-CQI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119556 Choline biosynthesis I none Chenopodium quinoa AUR62027900 R-CQI-9608682 AUR62027900 [nucleoplasm] R-CQI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8934036 Long day regulated expression of florigens none Chenopodium quinoa AUR62027900 R-CQI-9608682 AUR62027900 [nucleoplasm] R-CQI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9608575 Reproductive meristem phase change none Chenopodium quinoa AUR62027900 R-CQI-9608606 AUR62027900 [cytosol] R-CQI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9608575 Reproductive meristem phase change none Chenopodium quinoa AUR62027959 R-CQI-5632143 AUR62027959 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62027959 R-CQI-5632143 AUR62027959 [nucleoplasm] R-CQI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924451 Shoot (tiller) formation and regulation of tiller angle none Chenopodium quinoa AUR62027974 R-CQI-1123489 AUR62027974 [cytosol] R-CQI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119370 Sterol biosynthesis none Chenopodium quinoa AUR62028265 R-CQI-1123534 AUR62028265 [cytosol] R-CQI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119438 Secologanin and strictosidine biosynthesis none Chenopodium quinoa AUR62028271 R-CQI-5084918-2 AUR62028271 [cytosol] R-CQI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119624 Methionine salvage pathway none Chenopodium quinoa AUR62028286 R-CQI-5608125-2 AUR62028286 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62028307 R-CQI-9607102 AUR62028307 [mitochondrion] R-CQI-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9607185 Generation of superoxide radicals none Chenopodium quinoa AUR62028315 R-CQI-1129561 AUR62028315 [cytosol] R-CQI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119452 Galactose degradation II none Chenopodium quinoa AUR62028315 R-CQI-1129561 AUR62028315 [cytosol] R-CQI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119465 Sucrose biosynthesis none Chenopodium quinoa AUR62028330 R-CQI-6788201-2 AUR62028330 [nucleoplasm] R-CQI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6788019 Salicylic acid signaling none Chenopodium quinoa AUR62028335 R-CQI-1129571 AUR62028335 [mitochondrion] R-CQI-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119365 Lysine degradation II none Chenopodium quinoa AUR62028352 R-CQI-1124334 AUR62028352 [plasma membrane] R-CQI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119314 Cellulose biosynthesis none Chenopodium quinoa AUR62028366 R-CQI-1125014 AUR62028366 [cytosol] R-CQI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Chenopodium quinoa AUR62028386 R-CQI-1122932-3 AUR62028386 [cytosol] R-CQI-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119317 Spermine biosynthesis none Chenopodium quinoa AUR62028386 R-CQI-1122932-3 AUR62028386 [cytosol] R-CQI-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119343 Spermidine biosynthesis none Chenopodium quinoa AUR62028386 R-CQI-1122932-3 AUR62028386 [cytosol] R-CQI-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119446 Lysine degradation I none Chenopodium quinoa AUR62028386 R-CQI-5654765-3 AUR62028386 [cytosol] R-CQI-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119446 Lysine degradation I none Chenopodium quinoa AUR62028387 R-CQI-1122932-2 AUR62028387 [cytosol] R-CQI-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119317 Spermine biosynthesis none Chenopodium quinoa AUR62028387 R-CQI-1122932-2 AUR62028387 [cytosol] R-CQI-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119343 Spermidine biosynthesis none Chenopodium quinoa AUR62028387 R-CQI-1122932-2 AUR62028387 [cytosol] R-CQI-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119446 Lysine degradation I none Chenopodium quinoa AUR62028387 R-CQI-5654765-2 AUR62028387 [cytosol] R-CQI-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119446 Lysine degradation I none Chenopodium quinoa AUR62028399 R-CQI-1129203 AUR62028399 [cytosol] R-CQI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119428 GDP-D-rhamnose biosynthesis none Chenopodium quinoa AUR62028399 R-CQI-1129203 AUR62028399 [cytosol] R-CQI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Chenopodium quinoa AUR62028615 R-CQI-1129723 AUR62028615 [chloroplast] R-CQI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119494 Tryptophan biosynthesis none Chenopodium quinoa AUR62028616 R-CQI-1129184 AUR62028616 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62028616 R-CQI-1129184 AUR62028616 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62028616 R-CQI-5606505 AUR62028616 [plastid stroma] R-CQI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119419 Lysine biosynthesis VI none Chenopodium quinoa AUR62028632 R-CQI-9639789 AUR62028632 [plasma membrane] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62028728 R-CQI-9640698-2 AUR62028728 [nucleoplasm] R-CQI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640887 G1/S transition none Chenopodium quinoa AUR62028738 R-CQI-6787185-2 AUR62028738 [nucleoplasm] R-CQI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6787011 Jasmonic acid signaling none Chenopodium quinoa AUR62028746 R-CQI-1126549-2 AUR62028746 [cytosol] R-CQI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119486 IAA biosynthesis I none Chenopodium quinoa AUR62028947 R-CQI-1126892-2 AUR62028947 [cytosol] R-CQI-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119353 Linear furanocoumarin biosynthesis none Chenopodium quinoa AUR62028981 R-CQI-1130153-2 AUR62028981 [cytosol] R-CQI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119332 Jasmonic acid biosynthesis none Chenopodium quinoa AUR62028981 R-CQI-6787115-2 AUR62028981 [nucleoplasm] R-CQI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6787011 Jasmonic acid signaling none Chenopodium quinoa AUR62029020 R-CQI-4415101-3 AUR62029020 [cytosol] R-CQI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-3899351 Abscisic acid (ABA) mediated signaling none Chenopodium quinoa AUR62029020 R-CQI-4415101-3 AUR62029020 [cytosol] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62029021 R-CQI-4415101-2 AUR62029021 [cytosol] R-CQI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-3899351 Abscisic acid (ABA) mediated signaling none Chenopodium quinoa AUR62029021 R-CQI-4415101-2 AUR62029021 [cytosol] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62029042 R-CQI-6788127-2 AUR62029042 [nucleoplasm] R-CQI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6788019 Salicylic acid signaling none Chenopodium quinoa AUR62029042 R-CQI-6788179-2 AUR62029042 [cytosol] R-CQI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6788019 Salicylic acid signaling none Chenopodium quinoa AUR62029077 R-CQI-4754220 AUR62029077 [plastid stroma] R-CQI-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119449 Carotenoid biosynthesis none Chenopodium quinoa AUR62029077 R-CQI-1126847 AUR62029077 [cytosol] R-CQI-1119492 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119492 Lactucaxanthin biosynthesis none Chenopodium quinoa AUR62029078 R-CQI-1126131 AUR62029078 [cytosol] R-CQI-1119528 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119528 Beta-alanine betaine biosynthesis none Chenopodium quinoa AUR62029083 R-CQI-1130136 AUR62029083 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62029083 R-CQI-1130136 AUR62029083 [mitochondrial matrix] R-CQI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119540 Leucine biosynthesis none Chenopodium quinoa AUR62029097 R-CQI-1128322 AUR62029097 [cytosol] R-CQI-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119384 NAD biosynthesis I (from aspartate) none Chenopodium quinoa AUR62029123 R-CQI-1126998-2 AUR62029123 [cytosol] R-CQI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119615 Mevalonate pathway none Chenopodium quinoa AUR62029128 R-CQI-1124959 AUR62029128 [cytosol] R-CQI-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119623 Acyl-CoA synthetase pathway none Chenopodium quinoa AUR62029141 R-CQI-1123092-2 AUR62029141 [cytosol] R-CQI-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119278 PRPP biosynthesis I none Chenopodium quinoa AUR62029142 R-CQI-1123092-3 AUR62029142 [cytosol] R-CQI-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119278 PRPP biosynthesis I none Chenopodium quinoa AUR62029152 R-CQI-1126828 AUR62029152 [plastid] R-CQI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119403 Removal of superoxide radicals none Chenopodium quinoa AUR62029161 R-CQI-9826654 AUR62029161 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62029176 R-CQI-9675845 AUR62029176 [nucleoplasm] R-CQI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675782 Maturation none Chenopodium quinoa AUR62029379 R-CQI-1129926 AUR62029379 [cytosol] R-CQI-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Chenopodium quinoa AUR62029440 R-CQI-1125182-2 AUR62029440 [plastid stroma] R-CQI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119430 Chorismate biosynthesis none Chenopodium quinoa AUR62029466 R-CQI-2672431 AUR62029466 [cytosol] R-CQI-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119322 Leucodelphinidin biosynthesis none Chenopodium quinoa AUR62029466 R-CQI-2672431 AUR62029466 [cytosol] R-CQI-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Chenopodium quinoa AUR62029466 R-CQI-1124195 AUR62029466 [cytosol] R-CQI-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119531 Flavonoid biosynthesis none Chenopodium quinoa AUR62029475 R-CQI-1129818-3 AUR62029475 [mitochondrial matrix] R-CQI-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119365 Lysine degradation II none Chenopodium quinoa AUR62029475 R-CQI-1173242-3 AUR62029475 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62029481 R-CQI-9618057 AUR62029481 [cytosol] R-CQI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9618218 Arsenic uptake and detoxification none Chenopodium quinoa AUR62029494 R-CQI-1127357-4 AUR62029494 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62029494 R-CQI-1127357-4 AUR62029494 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62029500 R-CQI-1126440-2 AUR62029500 [plastid stroma] R-CQI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119430 Chorismate biosynthesis none Chenopodium quinoa AUR62029502 R-CQI-5654816 AUR62029502 [nucleoplasm] R-CQI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5654828 Strigolactone signaling none Chenopodium quinoa AUR62029514 R-CQI-8868866-7 AUR62029514 [endoplasmic reticulum membrane] R-CQI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8868949 Intracellular auxin transport none Chenopodium quinoa AUR62029515 R-CQI-8868866 AUR62029515 [endoplasmic reticulum membrane] R-CQI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8868949 Intracellular auxin transport none Chenopodium quinoa AUR62029516 R-CQI-8868866-2 AUR62029516 [endoplasmic reticulum membrane] R-CQI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8868949 Intracellular auxin transport none Chenopodium quinoa AUR62029517 R-CQI-8868866-4 AUR62029517 [endoplasmic reticulum membrane] R-CQI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8868949 Intracellular auxin transport none Chenopodium quinoa AUR62029518 R-CQI-8868866-5 AUR62029518 [endoplasmic reticulum membrane] R-CQI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8868949 Intracellular auxin transport none Chenopodium quinoa AUR62029688 R-CQI-9918273-2 AUR62029688 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62029688 R-CQI-9626376-2 AUR62029688 [plastid stroma] R-CQI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9626305 Regulatory network of nutrient accumulation none Chenopodium quinoa AUR62029812 R-CQI-8868904 AUR62029812 [endoplasmic reticulum membrane] R-CQI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8868949 Intracellular auxin transport none Chenopodium quinoa AUR62029841 R-CQI-1122785 AUR62029841 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62029841 R-CQI-1126726 AUR62029841 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62029841 R-CQI-1122785 AUR62029841 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62029841 R-CQI-1126726 AUR62029841 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62029841 R-CQI-1122785 AUR62029841 [cytosol] R-CQI-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119570 Cytosolic glycolysis none Chenopodium quinoa AUR62029926 R-CQI-1128798-2 AUR62029926 [cytosol] R-CQI-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119331 Cysteine biosynthesis I none Chenopodium quinoa AUR62029939 R-CQI-5654756-3 AUR62029939 [cytosol] R-CQI-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119281 Aspartate biosynthesis I none Chenopodium quinoa AUR62029939 R-CQI-1123648-3 AUR62029939 [plastid] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62029939 R-CQI-5631992-3 AUR62029939 [plastid stroma] R-CQI-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119553 Asparagine biosynthesis none Chenopodium quinoa AUR62029943 R-CQI-9640664 AUR62029943 [nucleoplasm] R-CQI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640760 G1 phase none Chenopodium quinoa AUR62030131 R-CQI-1122605 AUR62030131 [cytosol] R-CQI-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119341 Galactosylcyclitol biosynthesis none Chenopodium quinoa AUR62030139 R-CQI-1128624 AUR62030139 [mitochondrial inner membrane] R-CQI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119479 Valine degradation none Chenopodium quinoa AUR62030155 R-CQI-5631953 AUR62030155 [mitochondrial matrix] R-CQI-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119289 Arginine degradation none Chenopodium quinoa AUR62030155 R-CQI-1124214 AUR62030155 [cytosol] R-CQI-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119318 Proline biosynthesis V (from arginine) none Chenopodium quinoa AUR62030155 R-CQI-1124214 AUR62030155 [cytosol] R-CQI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119610 Biotin biosynthesis II none Chenopodium quinoa AUR62030178 R-CQI-1127383 AUR62030178 [cytosol] R-CQI-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119596 Glutamate biosynthesis I none Chenopodium quinoa AUR62030179 R-CQI-1127383-2 AUR62030179 [cytosol] R-CQI-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119596 Glutamate biosynthesis I none Chenopodium quinoa AUR62030185 R-CQI-5221144-4 AUR62030185 [plastid] R-CQI-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119374 Abscisic acid biosynthesis none Chenopodium quinoa AUR62030205 R-CQI-4415060 AUR62030205 [plasma membrane] R-CQI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-3899351 Abscisic acid (ABA) mediated signaling none Chenopodium quinoa AUR62030205 R-CQI-4415065 phospho-AUR62030205 [plasma membrane] R-CQI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-3899351 Abscisic acid (ABA) mediated signaling none Chenopodium quinoa AUR62030235 R-CQI-9640767-2 AUR62030235 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62030235 R-CQI-9640767-2 AUR62030235 [nucleoplasm] R-CQI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675824 DNA replication Initiation none Chenopodium quinoa AUR62030245 R-CQI-8854121-5 AUR62030245 [cytosol] R-CQI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119556 Choline biosynthesis I none Chenopodium quinoa AUR62030255 R-CQI-1129175 AUR62030255 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62030300 R-CQI-1126593-2 AUR62030300 [endosome] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62030300 R-CQI-5679293-2 AUR62030300 [plasma membrane] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62030300 R-CQI-8858098-2 AUR62030300 [plasma membrane] R-CQI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8858053 Polar auxin transport none Chenopodium quinoa AUR62030316 R-CQI-6788172-3 AUR62030316 [nucleoplasm] R-CQI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6788019 Salicylic acid signaling none Chenopodium quinoa AUR62030325 R-CQI-5603891 AUR62030325 [plastid stroma] R-CQI-1119420 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119420 Glutamate biosynthesis V none Chenopodium quinoa AUR62030325 R-CQI-1125410 AUR62030325 [chloroplast stroma] R-CQI-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119443 Ammonia assimilation cycle none Chenopodium quinoa AUR62030340 R-CQI-1123042-2 AUR62030340 R-CQI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119400 Methionine biosynthesis II none Chenopodium quinoa AUR62030362 R-CQI-5631958-2 AUR62030362 [cytosol] R-CQI-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119289 Arginine degradation none Chenopodium quinoa AUR62030362 R-CQI-1122345-2 AUR62030362 [cytosol] R-CQI-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119318 Proline biosynthesis V (from arginine) none Chenopodium quinoa AUR62030362 R-CQI-1122345-2 AUR62030362 [cytosol] R-CQI-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119631 Proline biosynthesis I none Chenopodium quinoa AUR62030363 R-CQI-1122832 AUR62030363 [plastid stroma] R-CQI-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119449 Carotenoid biosynthesis none Chenopodium quinoa AUR62030366 R-CQI-1129809-2 AUR62030366 [mitochondrial inner membrane] R-CQI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119410 Ascorbate biosynthesis none Chenopodium quinoa AUR62030573 R-CQI-9924407-3 EXPB5 [basolateral plasma membrane] R-CQI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924451 Shoot (tiller) formation and regulation of tiller angle none Chenopodium quinoa AUR62030627 R-CQI-1129811 AUR62030627 [mitochondrion] R-CQI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119403 Removal of superoxide radicals none Chenopodium quinoa AUR62030632 R-CQI-9681915-3 AUR62030632 [Golgi membrane] R-CQI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119574 UDP-L-arabinose biosynthesis and transport none Chenopodium quinoa AUR62030638 R-CQI-1130088 AUR62030638 [plasma membrane] R-CQI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119314 Cellulose biosynthesis none Chenopodium quinoa AUR62030640 R-CQI-8933766 AUR62030640 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62030671 R-CQI-9646016 AUR62030671 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62030671 R-CQI-9646016 AUR62030671 [nucleoplasm] R-CQI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675782 Maturation none Chenopodium quinoa AUR62030671 R-CQI-9646016 AUR62030671 [nucleoplasm] R-CQI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675885 Lagging strand synthesis none Chenopodium quinoa AUR62030766 R-CQI-6788042 AUR62030766 [nucleoplasm] R-CQI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6788019 Salicylic acid signaling none Chenopodium quinoa AUR62030795 R-CQI-9916309-2 CPK3 [plasma membrane] R-CQI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9916190 Root angle formation: elongation and curvature response none Chenopodium quinoa AUR62030803 R-CQI-1124145 AUR62030803 [mitochondrial matrix] R-CQI-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119445 Beta-alanine biosynthesis II none Chenopodium quinoa AUR62030805 R-CQI-9826604-3 AUR62030805 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62030817 R-CQI-1124190 AUR62030817 [plastid stroma] R-CQI-1119412 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119412 Chlorophyll a biosynthesis I none Chenopodium quinoa AUR62031241 R-CQI-1127015-2 AUR62031241 [cytosol] R-CQI-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119334 Ethylene biosynthesis from methionine none Chenopodium quinoa AUR62031241 R-CQI-1127015-2 AUR62031241 [cytosol] R-CQI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119624 Methionine salvage pathway none Chenopodium quinoa AUR62031260 R-CQI-8858085-2 AUR62031260 [plasma membrane] R-CQI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8858053 Polar auxin transport none Chenopodium quinoa AUR62031260 R-CQI-8858085-2 AUR62031260 [plasma membrane] R-CQI-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924494 Gravity sensing and statolith sedimentation none Chenopodium quinoa AUR62031260 R-CQI-9928298-2 PIN2 [endosome] R-CQI-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924494 Gravity sensing and statolith sedimentation none Chenopodium quinoa AUR62031442 R-CQI-1126602-2 AUR62031442 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62031442 R-CQI-1126602-2 AUR62031442 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62031442 R-CQI-5606494-2 AUR62031442 [plastid stroma] R-CQI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119419 Lysine biosynthesis VI none Chenopodium quinoa AUR62031623 R-CQI-9675439 AUR62031623 [mitochondrial matrix] R-CQI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030654 Primary root development none Chenopodium quinoa AUR62031639 R-CQI-4752546-2 AUR62031639 [plastid stroma] R-CQI-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119498 Phylloquinone biosynthesis none Chenopodium quinoa AUR62031670 R-CQI-9924543 CYP714D1/EUI1 [endoplasmic reticulum membrane] R-CQI-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Chenopodium quinoa AUR62031720 R-CQI-8854108-3 AUR62031720 [cytosol] R-CQI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119556 Choline biosynthesis I none Chenopodium quinoa AUR62031735 R-CQI-4827041 AUR62031735 [plastid stroma] R-CQI-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-4827054 Tetrapyrrole biosynthesis I none Chenopodium quinoa AUR62031739 R-CQI-1123717-5 AUR62031739 [cytosol] R-CQI-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119395 Maackiain biosynthesis none Chenopodium quinoa AUR62031739 R-CQI-1123717-5 AUR62031739 [cytosol] R-CQI-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119453 Medicarpin biosynthesis none Chenopodium quinoa AUR62031746 R-CQI-6788172-4 AUR62031746 [nucleoplasm] R-CQI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6788019 Salicylic acid signaling none Chenopodium quinoa AUR62031766 R-CQI-1124560 AUR62031766 [cytosol] R-CQI-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119563 UDP-D-xylose biosynthesis none Chenopodium quinoa AUR62031766 R-CQI-9681903 AUR62031766 [Golgi lumen] R-CQI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119574 UDP-L-arabinose biosynthesis and transport none Chenopodium quinoa AUR62031766 R-CQI-1124560 AUR62031766 [cytosol] R-CQI-5654894 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5654894 UDP-D-apiose biosynthesis none Chenopodium quinoa AUR62031801 R-CQI-9640789 AUR62031801 [nucleoplasm] R-CQI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640760 G1 phase none Chenopodium quinoa AUR62031834 R-CQI-1126091 AUR62031834 [cytosol] R-CQI-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119394 Pantothenate and coenzyme A biosynthesis III none Chenopodium quinoa AUR62031834 R-CQI-1126091 AUR62031834 [cytosol] R-CQI-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119496 Pantothenate biosynthesis I none Chenopodium quinoa AUR62031834 R-CQI-1126091 AUR62031834 [cytosol] R-CQI-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119544 Pantothenate biosynthesis II none Chenopodium quinoa AUR62031834 R-CQI-1126091 AUR62031834 [cytosol] R-CQI-1119568 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119568 Pantothenate biosynthesis III none Chenopodium quinoa AUR62031837 R-CQI-3240748 AUR62031837 [cytosol] R-CQI-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Chenopodium quinoa AUR62031867 R-CQI-1126165-2 AUR62031867 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62031867 R-CQI-5608120-2 AUR62031867 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62031929 R-CQI-1125997 AUR62031929 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62031929 R-CQI-1125997 AUR62031929 [nucleoplasm] R-CQI-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030680 Crown root development none Chenopodium quinoa AUR62031966 R-CQI-1127523-2 AUR62031966 [cytosol] R-CQI-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Chenopodium quinoa AUR62031997 R-CQI-9639810-2 AUR62031997 [cell wall] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62032471 R-CQI-1125309-2 AUR62032471 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62032480 R-CQI-1124935-2 AUR62032480 [cytosol] R-CQI-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119349 S-methylmethionine cycle none Chenopodium quinoa AUR62032486 R-CQI-1124242-2 AUR62032486 [plastid stroma] R-CQI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119464 Methylerythritol phosphate pathway none Chenopodium quinoa AUR62032496 R-CQI-1127292-2 AUR62032496 [plastid stroma] R-CQI-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Chenopodium quinoa AUR62032505 R-CQI-1127353 AUR62032505 [cytosol] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62032553 R-CQI-9924543-2 CYP714D1/EUI1 [endoplasmic reticulum membrane] R-CQI-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Chenopodium quinoa AUR62032555 R-CQI-1128131 AUR62032555 [cytosol] R-CQI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119473 Cytokinins-O-glucoside biosynthesis none Chenopodium quinoa AUR62032607 R-CQI-8854108 AUR62032607 [cytosol] R-CQI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119556 Choline biosynthesis I none Chenopodium quinoa AUR62032620 R-CQI-4827041-2 AUR62032620 [plastid stroma] R-CQI-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-4827054 Tetrapyrrole biosynthesis I none Chenopodium quinoa AUR62032623 R-CQI-1123717-3 AUR62032623 [cytosol] R-CQI-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119395 Maackiain biosynthesis none Chenopodium quinoa AUR62032623 R-CQI-1123717-3 AUR62032623 [cytosol] R-CQI-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119453 Medicarpin biosynthesis none Chenopodium quinoa AUR62032624 R-CQI-1123717-2 AUR62032624 [cytosol] R-CQI-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119395 Maackiain biosynthesis none Chenopodium quinoa AUR62032624 R-CQI-1123717-2 AUR62032624 [cytosol] R-CQI-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119453 Medicarpin biosynthesis none Chenopodium quinoa AUR62032631 R-CQI-6788172 AUR62032631 [nucleoplasm] R-CQI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6788019 Salicylic acid signaling none Chenopodium quinoa AUR62032781 R-CQI-1129184-2 AUR62032781 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62032781 R-CQI-1129184-2 AUR62032781 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62032781 R-CQI-5606505-2 AUR62032781 [plastid stroma] R-CQI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119419 Lysine biosynthesis VI none Chenopodium quinoa AUR62032816 R-CQI-9636827 AUR62032816 [nucleoplasm] R-CQI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9766881 TF network involved in salinity response none Chenopodium quinoa AUR62032823 R-CQI-9025819-2 AUR62032823 [plasma membrane] R-CQI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025727 Iron uptake and transport in root vascular system none Chenopodium quinoa AUR62032824 R-CQI-5655076-3 AUR62032824 [Golgi lumen] R-CQI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5655101 Xyloglucan biosynthesis none Chenopodium quinoa AUR62032840 R-CQI-5655070-4 AUR62032840 [Golgi lumen] R-CQI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5655101 Xyloglucan biosynthesis none Chenopodium quinoa AUR62032841 R-CQI-5655070-3 AUR62032841 [Golgi lumen] R-CQI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5655101 Xyloglucan biosynthesis none Chenopodium quinoa AUR62032900 R-CQI-5632121-2 AUR62032900 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62032950 R-CQI-1125587 AUR62032950 [cytosol] R-CQI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119379 Flavin biosynthesis none Chenopodium quinoa AUR62032954 R-CQI-8933787-2 AUR62032954 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62032955 R-CQI-1123525-2 AUR62032955 [cytosol] R-CQI-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119384 NAD biosynthesis I (from aspartate) none Chenopodium quinoa AUR62032964 R-CQI-9826597-7 AUR62032964 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62032966 R-CQI-9826597-8 AUR62032966 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62032967 R-CQI-9826597-4 AUR62032967 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62032969 R-CQI-9826597-5 AUR62032969 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62032970 R-CQI-1125237-2 AUR62032970 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62033043 R-CQI-9675354 AUR62033043 [nucleoplasm] R-CQI-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675508 Root elongation none Chenopodium quinoa AUR62033043 R-CQI-9675335 AUR62033043 [mitochondrial matrix] R-CQI-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675508 Root elongation none Chenopodium quinoa AUR62033087 R-CQI-9640716 AUR62033087 [nucleoplasm] R-CQI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030654 Primary root development none Chenopodium quinoa AUR62033087 R-CQI-9640716 AUR62033087 [nucleoplasm] R-CQI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640882 Assembly of pre-replication complex none Chenopodium quinoa AUR62033087 R-CQI-9640716 AUR62033087 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62033140 R-CQI-1125341-2 AUR62033140 [cytosol] R-CQI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119460 Isoleucine biosynthesis from threonine none Chenopodium quinoa AUR62033140 R-CQI-1125341-2 AUR62033140 [cytosol] R-CQI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119600 Valine biosynthesis none Chenopodium quinoa AUR62033205 R-CQI-1125406 AUR62033205 [cytosol] R-CQI-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119418 Suberin biosynthesis none Chenopodium quinoa AUR62033249 R-CQI-1126513 AUR62033249 [cytosol] R-CQI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119332 Jasmonic acid biosynthesis none Chenopodium quinoa AUR62033267 R-CQI-1127523 AUR62033267 [cytosol] R-CQI-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Chenopodium quinoa AUR62033279 R-CQI-1122974-4 AUR62033279 [mitochondrial matrix] R-CQI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119479 Valine degradation none Chenopodium quinoa AUR62033280 R-CQI-1122974-5 AUR62033280 [mitochondrial matrix] R-CQI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119479 Valine degradation none Chenopodium quinoa AUR62033281 R-CQI-1122974 AUR62033281 [mitochondrial matrix] R-CQI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119479 Valine degradation none Chenopodium quinoa AUR62033316 R-CQI-5138484 AUR62033316 [plastid stroma] R-CQI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119263 Arginine biosynthesis none Chenopodium quinoa AUR62033316 R-CQI-5138484 AUR62033316 [plastid stroma] R-CQI-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119539 Ornithine biosynthesis none Chenopodium quinoa AUR62033316 R-CQI-5138484 AUR62033316 [plastid stroma] R-CQI-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119622 Arginine biosynthesis II (acetyl cycle) none Chenopodium quinoa AUR62033327 R-CQI-1125670 AUR62033327 [cytosol] R-CQI-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119393 Asparagine degradation I none Chenopodium quinoa AUR62033329 R-CQI-5146758-4 AUR62033329 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62033330 R-CQI-5146758-2 AUR62033330 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62033332 R-CQI-1125670-4 AUR62033332 [cytosol] R-CQI-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119393 Asparagine degradation I none Chenopodium quinoa AUR62033343 R-CQI-5138484-3 AUR62033343 [plastid stroma] R-CQI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119263 Arginine biosynthesis none Chenopodium quinoa AUR62033343 R-CQI-5138484-3 AUR62033343 [plastid stroma] R-CQI-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119539 Ornithine biosynthesis none Chenopodium quinoa AUR62033343 R-CQI-5138484-3 AUR62033343 [plastid stroma] R-CQI-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119622 Arginine biosynthesis II (acetyl cycle) none Chenopodium quinoa AUR62033432 R-CQI-1124269 AUR62033432 [cytosol] R-CQI-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119456 Brassinosteroid biosynthesis II none Chenopodium quinoa AUR62033491 R-CQI-8854102 AUR62033491 [cytosol] R-CQI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119556 Choline biosynthesis I none Chenopodium quinoa AUR62033497 R-CQI-9608694 AUR62033497 [cytosol] R-CQI-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9928831 Severe drought none Chenopodium quinoa AUR62033497 R-CQI-9928774 AUR62033497 [nucleoplasm] R-CQI-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9928831 Severe drought none Chenopodium quinoa AUR62033546 R-CQI-1124067-2 AUR62033546 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62033546 R-CQI-9626520-2 AUR62033546 [plastid stroma] R-CQI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9626305 Regulatory network of nutrient accumulation none Chenopodium quinoa AUR62033562 R-CQI-5149646-2 AUR62033562 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62033562 R-CQI-1126652-2 AUR62033562 [cytosol] R-CQI-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119570 Cytosolic glycolysis none Chenopodium quinoa AUR62033583 R-CQI-1127922 AUR62033583 [cytosol] R-CQI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119370 Sterol biosynthesis none Chenopodium quinoa AUR62033587 R-CQI-8879061-2 LOS2 homolog [nucleoplasm] R-CQI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8879007 Response to cold temperature none Chenopodium quinoa AUR62033623 R-CQI-1125584-2 AUR62033623 [plastid stroma] R-CQI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119509 Histidine biosynthesis I none Chenopodium quinoa AUR62033631 R-CQI-4723654-2 AUR62033631 [plastid stroma] R-CQI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119464 Methylerythritol phosphate pathway none Chenopodium quinoa AUR62033631 R-CQI-1130030-2 AUR62033631 [cytosol] R-CQI-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119594 Pyridoxal 5'-phosphate biosynthesis none Chenopodium quinoa AUR62033631 R-CQI-1130030-2 AUR62033631 [cytosol] R-CQI-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119629 Thiamine biosynthesis none Chenopodium quinoa AUR62033638 R-CQI-5606478 AUR62033638 [plastid stroma] R-CQI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119419 Lysine biosynthesis VI none Chenopodium quinoa AUR62033705 R-CQI-1128534 AUR62033705 [cytosol] R-CQI-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119437 Glutathione redox reactions I none Chenopodium quinoa AUR62033706 R-CQI-1128534-2 AUR62033706 [cytosol] R-CQI-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119437 Glutathione redox reactions I none Chenopodium quinoa AUR62033719 R-CQI-1124291 AUR62033719 [cytosol] R-CQI-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Chenopodium quinoa AUR62033719 R-CQI-1124291 AUR62033719 [cytosol] R-CQI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119438 Secologanin and strictosidine biosynthesis none Chenopodium quinoa AUR62033719 R-CQI-1124291 AUR62033719 [cytosol] R-CQI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119486 IAA biosynthesis I none Chenopodium quinoa AUR62033748 R-CQI-5654756-2 AUR62033748 [cytosol] R-CQI-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119281 Aspartate biosynthesis I none Chenopodium quinoa AUR62033748 R-CQI-1123648-2 AUR62033748 [plastid] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62033748 R-CQI-5631992-2 AUR62033748 [plastid stroma] R-CQI-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119553 Asparagine biosynthesis none Chenopodium quinoa AUR62033763 R-CQI-9640664-2 AUR62033763 [nucleoplasm] R-CQI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640760 G1 phase none Chenopodium quinoa AUR62033777 R-CQI-1128798 AUR62033777 [cytosol] R-CQI-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119331 Cysteine biosynthesis I none Chenopodium quinoa AUR62033829 R-CQI-5654942-2 AUR62033829 [Golgi lumen] R-CQI-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5654909 Xylan biosynthesis none Chenopodium quinoa AUR62033832 R-CQI-1123465-2 AUR62033832 [plastid stroma] R-CQI-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119424 Plastid glycolysis none Chenopodium quinoa AUR62033832 R-CQI-5633368-2 AUR62033832 [cytosol] R-CQI-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119601 Trehalose degradation II none Chenopodium quinoa AUR62033842 R-CQI-1126344 AUR62033842 [plastid stroma] R-CQI-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119529 Sulfate activation for sulfonation none Chenopodium quinoa AUR62033843 R-CQI-9640763-2 AUR62033843 [nucleoplasm] R-CQI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640887 G1/S transition none Chenopodium quinoa AUR62033843 R-CQI-9640885-2 phospho-AUR62033843 [nucleoplasm] R-CQI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640887 G1/S transition none Chenopodium quinoa AUR62033858 R-CQI-1129208 AUR62033858 [chloroplast envelope] R-CQI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119402 Phospholipid biosynthesis I none Chenopodium quinoa AUR62033894 R-CQI-9035593-2 AUR62033894 [cytosol] R-CQI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9035605 Regulation of seed size none Chenopodium quinoa AUR62033894 R-CQI-9035634-2 AUR62033894 [nucleoplasm] R-CQI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9035605 Regulation of seed size none Chenopodium quinoa AUR62033894 R-CQI-9035593-2 AUR62033894 [cytosol] R-CQI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9608575 Reproductive meristem phase change none Chenopodium quinoa AUR62033894 R-CQI-9035634-2 AUR62033894 [nucleoplasm] R-CQI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9608575 Reproductive meristem phase change none Chenopodium quinoa AUR62033940 R-CQI-6788127 AUR62033940 [nucleoplasm] R-CQI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6788019 Salicylic acid signaling none Chenopodium quinoa AUR62033940 R-CQI-6788179 AUR62033940 [cytosol] R-CQI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6788019 Salicylic acid signaling none Chenopodium quinoa AUR62033975 R-CQI-9658664-2 AUR62033975 [plasma membrane] R-CQI-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119567 Beta-alanine biosynthesis I none Chenopodium quinoa AUR62033992 R-CQI-8853988 Phosphatidylglycerophosphatase [mitochondrial matrix] R-CQI-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119260 Cardiolipin biosynthesis none Chenopodium quinoa AUR62033998 R-CQI-1125698-2 AUR62033998 [cytosol] R-CQI-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119436 Peptidoglycan biosynthesis I none Chenopodium quinoa AUR62034021 R-CQI-9640753 AUR62034021 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62034021 R-CQI-9640753 AUR62034021 [nucleoplasm] R-CQI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675824 DNA replication Initiation none Chenopodium quinoa AUR62034372 R-CQI-8858063 AUR62034372 [plasma membrane] R-CQI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8858053 Polar auxin transport none Chenopodium quinoa AUR62034382 R-CQI-9675860-2 AUR62034382 [nucleoplasm] R-CQI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675824 DNA replication Initiation none Chenopodium quinoa AUR62034483 R-CQI-1124949-2 AUR62034483 [plastid stroma] R-CQI-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119308 Momilactone biosynthesis none Chenopodium quinoa AUR62034483 R-CQI-1124949-2 AUR62034483 [plastid stroma] R-CQI-1119328 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119328 Oleoresin sesquiterpene volatiles biosynthesis none Chenopodium quinoa AUR62034483 R-CQI-1129421-2 AUR62034483 [chloroplast] R-CQI-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119348 Ent-kaurene biosynthesis none Chenopodium quinoa AUR62034483 R-CQI-1124949-2 AUR62034483 [plastid stroma] R-CQI-1119371 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119371 Oryzalexin A-F biosynthesis none Chenopodium quinoa AUR62034483 R-CQI-1124949-2 AUR62034483 [plastid stroma] R-CQI-1119521 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119521 Oryzalexin S biosynthesis none Chenopodium quinoa AUR62034483 R-CQI-1129220-2 AUR62034483 [cytosol] R-CQI-1119583 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119583 Phytocassane biosynthesis none Chenopodium quinoa AUR62034483 R-CQI-9610718-2 AUR62034483 [plastid stroma] R-CQI-9610720 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9610720 Oryzalide A biosynthesis none Chenopodium quinoa AUR62034490 R-CQI-1124453 AUR62034490 [peroxisomal matrix] R-CQI-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119407 Ureide biosynthesis none Chenopodium quinoa AUR62034548 R-CQI-8868961-2 AUR62034548 [plant-type vacuole membrane] R-CQI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8868949 Intracellular auxin transport none Chenopodium quinoa AUR62034563 R-CQI-9826692-2 AUR62034563 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62034578 R-CQI-6787105 AUR62034578 [cytosol] R-CQI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6787011 Jasmonic acid signaling none Chenopodium quinoa AUR62034591 R-CQI-5679398-2 AUR62034591 [cytosol] R-CQI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5679411 Gibberellin signaling none Chenopodium quinoa AUR62034596 R-CQI-5632341 AUR62034596 [cytosol] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62034596 R-CQI-5632170 phospho-AUR62034596 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62034614 R-CQI-1125612-2 AUR62034614 [cytosol] R-CQI-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119353 Linear furanocoumarin biosynthesis none Chenopodium quinoa AUR62034675 R-CQI-1122398 AUR62034675 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62034743 R-CQI-5606478-3 AUR62034743 [plastid stroma] R-CQI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119419 Lysine biosynthesis VI none Chenopodium quinoa AUR62034751 R-CQI-1125584 AUR62034751 [plastid stroma] R-CQI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119509 Histidine biosynthesis I none Chenopodium quinoa AUR62034888 R-CQI-8854108-4 AUR62034888 [cytosol] R-CQI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119556 Choline biosynthesis I none Chenopodium quinoa AUR62034941 R-CQI-5606521-2 AUR62034941 [plastid stroma] R-CQI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119419 Lysine biosynthesis VI none Chenopodium quinoa AUR62034953 R-CQI-5683299-2 AUR62034953 [cytosol] R-CQI-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119451 Xylose degradation none Chenopodium quinoa AUR62034953 R-CQI-1130302-2 AUR62034953 [cytosol] R-CQI-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119451 Xylose degradation none Chenopodium quinoa AUR62034954 R-CQI-5683299-3 AUR62034954 [cytosol] R-CQI-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119451 Xylose degradation none Chenopodium quinoa AUR62034954 R-CQI-1130302-3 AUR62034954 [cytosol] R-CQI-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119451 Xylose degradation none Chenopodium quinoa AUR62034980 R-CQI-1122974-3 AUR62034980 [mitochondrial matrix] R-CQI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119479 Valine degradation none Chenopodium quinoa AUR62034981 R-CQI-9826652-2 OSH15 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62034981 R-CQI-9631619-2 AUR62034981 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62035016 R-CQI-9025513-4 AUR62035016 [endoplasmic reticulum membrane] R-CQI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119325 Sphingolipid metabolism none Chenopodium quinoa AUR62035016 R-CQI-1129700-4 AUR62035016 [cytosol] R-CQI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119610 Biotin biosynthesis II none Chenopodium quinoa AUR62035118 R-CQI-1128974 AUR62035118 [cytosol] R-CQI-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119287 Vitamin E biosynthesis none Chenopodium quinoa AUR62035118 R-CQI-1128974 AUR62035118 [cytosol] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62035221 R-CQI-9826604 AUR62035221 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62035223 R-CQI-1129111 AUR62035223 [cytosol] R-CQI-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119349 S-methylmethionine cycle none Chenopodium quinoa AUR62035223 R-CQI-1129111 AUR62035223 [cytosol] R-CQI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119400 Methionine biosynthesis II none Chenopodium quinoa AUR62035236 R-CQI-1128534-3 AUR62035236 [cytosol] R-CQI-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119437 Glutathione redox reactions I none Chenopodium quinoa AUR62035262 R-CQI-5632316-2 AUR62035262 [cytosol] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62035279 R-CQI-9826681 EREBP129 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62035325 R-CQI-2731026 AUR62035325 [endoplasmic reticulum membrane] R-CQI-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119557 GA12 biosynthesis none Chenopodium quinoa AUR62035325 R-CQI-1130405 AUR62035325 [endoplasmic reticulum membrane] R-CQI-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119557 GA12 biosynthesis none Chenopodium quinoa AUR62035370 R-CQI-1129113-2 AUR62035370 [cytosol] R-CQI-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119298 Glutathione redox reactions II none Chenopodium quinoa AUR62035370 R-CQI-1129113-2 AUR62035370 [cytosol] R-CQI-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119437 Glutathione redox reactions I none Chenopodium quinoa AUR62035490 R-CQI-9626474-2 AUR62035490 [trans-Golgi network membrane] R-CQI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9626305 Regulatory network of nutrient accumulation none Chenopodium quinoa AUR62035520 R-CQI-9025351 AUR62035520 [cytosol] R-CQI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119402 Phospholipid biosynthesis I none Chenopodium quinoa AUR62035539 R-CQI-8987531-4 AUR62035539 [chloroplast] R-CQI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119312 Photorespiration none Chenopodium quinoa AUR62035539 R-CQI-1125951-4 AUR62035539 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62035540 R-CQI-1127873 AUR62035540 [plastid stroma] R-CQI-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119424 Plastid glycolysis none Chenopodium quinoa AUR62035540 R-CQI-1127873 AUR62035540 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62035587 R-CQI-9025699-2 AUR62035587 [plasma membrane] R-CQI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8858053 Polar auxin transport none Chenopodium quinoa AUR62035587 R-CQI-9025699-2 AUR62035587 [plasma membrane] R-CQI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025727 Iron uptake and transport in root vascular system none Chenopodium quinoa AUR62035588 R-CQI-9025699-5 AUR62035588 [plasma membrane] R-CQI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8858053 Polar auxin transport none Chenopodium quinoa AUR62035588 R-CQI-9025699-5 AUR62035588 [plasma membrane] R-CQI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025727 Iron uptake and transport in root vascular system none Chenopodium quinoa AUR62035617 R-CQI-9918210-3 granule-bound starch synthase 1 (GBSSI, or Waxy) [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62035617 R-CQI-9918222-3 AUR62035617 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62035617 R-CQI-9626344-3 AUR62035617 [plastid stroma] R-CQI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9626305 Regulatory network of nutrient accumulation none Chenopodium quinoa AUR62035726 R-CQI-5608137 AUR62035726 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62035738 R-CQI-9640763 AUR62035738 [nucleoplasm] R-CQI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640887 G1/S transition none Chenopodium quinoa AUR62035738 R-CQI-9640885 phospho-AUR62035738 [nucleoplasm] R-CQI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640887 G1/S transition none Chenopodium quinoa AUR62035739 R-CQI-1126344-2 AUR62035739 [plastid stroma] R-CQI-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119529 Sulfate activation for sulfonation none Chenopodium quinoa AUR62035751 R-CQI-1123465 AUR62035751 [plastid stroma] R-CQI-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119424 Plastid glycolysis none Chenopodium quinoa AUR62035751 R-CQI-5633368 AUR62035751 [cytosol] R-CQI-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119601 Trehalose degradation II none Chenopodium quinoa AUR62035753 R-CQI-5654942 AUR62035753 [Golgi lumen] R-CQI-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5654909 Xylan biosynthesis none Chenopodium quinoa AUR62035755 R-CQI-9826683 HSFB4A [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62035762 R-CQI-5683299-4 AUR62035762 [cytosol] R-CQI-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119451 Xylose degradation none Chenopodium quinoa AUR62035762 R-CQI-1130302-4 AUR62035762 [cytosol] R-CQI-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119451 Xylose degradation none Chenopodium quinoa AUR62035764 R-CQI-5683299 AUR62035764 [cytosol] R-CQI-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119451 Xylose degradation none Chenopodium quinoa AUR62035764 R-CQI-1130302 AUR62035764 [cytosol] R-CQI-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119451 Xylose degradation none Chenopodium quinoa AUR62035839 R-CQI-1126560-3 AUR62035839 [cytosol] R-CQI-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119516 Trehalose biosynthesis I none Chenopodium quinoa AUR62035865 R-CQI-5138500-2 AUR62035865 [plastid stroma] R-CQI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119263 Arginine biosynthesis none Chenopodium quinoa AUR62035865 R-CQI-1129397-2 AUR62035865 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62035865 R-CQI-1129397-2 AUR62035865 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62035865 R-CQI-1129397-2 AUR62035865 [cytosol] R-CQI-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119295 Homoserine biosynthesis none Chenopodium quinoa AUR62035865 R-CQI-5138500-2 AUR62035865 [plastid stroma] R-CQI-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119539 Ornithine biosynthesis none Chenopodium quinoa AUR62035865 R-CQI-5138500-2 AUR62035865 [plastid stroma] R-CQI-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119622 Arginine biosynthesis II (acetyl cycle) none Chenopodium quinoa AUR62035874 R-CQI-5149644 AUR62035874 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62035879 R-CQI-1129113 AUR62035879 [cytosol] R-CQI-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119298 Glutathione redox reactions II none Chenopodium quinoa AUR62035879 R-CQI-1129113 AUR62035879 [cytosol] R-CQI-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119437 Glutathione redox reactions I none Chenopodium quinoa AUR62035923 R-CQI-2731026-2 AUR62035923 [endoplasmic reticulum membrane] R-CQI-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119557 GA12 biosynthesis none Chenopodium quinoa AUR62035923 R-CQI-1130405-2 AUR62035923 [endoplasmic reticulum membrane] R-CQI-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119557 GA12 biosynthesis none Chenopodium quinoa AUR62036004 R-CQI-9658702 AUR62036004 [plastid stroma] R-CQI-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119297 Beta-alanine biosynthesis III none Chenopodium quinoa AUR62036043 R-CQI-1129547-4 AUR62036043 [cytosol] R-CQI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119389 Phenylalanine biosynthesis I none Chenopodium quinoa AUR62036043 R-CQI-1129547-4 AUR62036043 [cytosol] R-CQI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119400 Methionine biosynthesis II none Chenopodium quinoa AUR62036043 R-CQI-1129547-4 AUR62036043 [cytosol] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62036044 R-CQI-1129547-6 AUR62036044 [cytosol] R-CQI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119389 Phenylalanine biosynthesis I none Chenopodium quinoa AUR62036044 R-CQI-1129547-6 AUR62036044 [cytosol] R-CQI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119400 Methionine biosynthesis II none Chenopodium quinoa AUR62036044 R-CQI-1129547-6 AUR62036044 [cytosol] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62036197 R-CQI-1127065 AUR62036197 [cytosol] R-CQI-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119304 Putrescine biosynthesis II none Chenopodium quinoa AUR62036209 R-CQI-1127076-2 AUR62036209 [cytosol] R-CQI-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119418 Suberin biosynthesis none Chenopodium quinoa AUR62036209 R-CQI-1127076-2 AUR62036209 [cytosol] R-CQI-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119582 Phenylpropanoid biosynthesis, initial reactions none Chenopodium quinoa AUR62036235 R-CQI-6786908-2 AUR62036235 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62036235 R-CQI-9826697 AUR62036235 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62036261 R-CQI-1125151-4 AUR62036261 [cytosol] R-CQI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119400 Methionine biosynthesis II none Chenopodium quinoa AUR62036261 R-CQI-1125151-4 AUR62036261 [cytosol] R-CQI-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119501 S-adenosyl-L-methionine cycle none Chenopodium quinoa AUR62036326 R-CQI-1127089-3 AUR62036326 [cytosol] R-CQI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119465 Sucrose biosynthesis none Chenopodium quinoa AUR62036470 R-CQI-1126998-3 AUR62036470 [cytosol] R-CQI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119615 Mevalonate pathway none Chenopodium quinoa AUR62036656 R-CQI-1125612 AUR62036656 [cytosol] R-CQI-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119353 Linear furanocoumarin biosynthesis none Chenopodium quinoa AUR62036673 R-CQI-5632341-2 AUR62036673 [cytosol] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62036673 R-CQI-5632170-2 phospho-AUR62036673 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62036678 R-CQI-5679398-4 AUR62036678 [cytosol] R-CQI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5679411 Gibberellin signaling none Chenopodium quinoa AUR62036718 R-CQI-1127899 AUR62036718 [cytosol] R-CQI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119370 Sterol biosynthesis none Chenopodium quinoa AUR62036720 R-CQI-1125556 AUR62036720 [cytosol] R-CQI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119410 Ascorbate biosynthesis none Chenopodium quinoa AUR62036720 R-CQI-1125556 AUR62036720 [cytosol] R-CQI-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119628 GDP-mannose metabolism none Chenopodium quinoa AUR62036788 R-CQI-1128534-4 AUR62036788 [cytosol] R-CQI-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119437 Glutathione redox reactions I none Chenopodium quinoa AUR62036860 R-CQI-9918274 SBE1 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62036860 R-CQI-9626342 AUR62036860 [plastid stroma] R-CQI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9626305 Regulatory network of nutrient accumulation none Chenopodium quinoa AUR62036890 R-CQI-5632232-3 phospho-AUR62036890 [plasma membrane] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62036906 R-CQI-1125631-2 AUR62036906 [cytosol] R-CQI-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119321 Glycerol degradation I none Chenopodium quinoa AUR62036914 R-CQI-1125533 AUR62036914 [cytosol] R-CQI-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119304 Putrescine biosynthesis II none Chenopodium quinoa AUR62036933 R-CQI-1123404-2 AUR62036933 [peroxisomal matrix] R-CQI-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119407 Ureide biosynthesis none Chenopodium quinoa AUR62037041 R-CQI-9608693-2 AUR62037041 [cytosol] R-CQI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9608575 Reproductive meristem phase change none Chenopodium quinoa AUR62037090 R-CQI-1122347 AUR62037090 [cytosol] R-CQI-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119384 NAD biosynthesis I (from aspartate) none Chenopodium quinoa AUR62037092 R-CQI-1123337 AUR62037092 [plastid stroma] R-CQI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119509 Histidine biosynthesis I none Chenopodium quinoa AUR62037145 R-CQI-9927865-2 AUR62037145 [nucleoplasm] R-CQI-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8934257 Transition from vegetative to reproductive shoot apical meristem none Chenopodium quinoa AUR62037146 R-CQI-1122601 AUR62037146 [mitochondrial inner membrane] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62037153 R-CQI-1127443 AUR62037153 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62037153 R-CQI-1122818 AUR62037153 [cytosol] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62037259 R-CQI-1128101 AUR62037259 [endoplasmic reticulum membrane] R-CQI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119402 Phospholipid biosynthesis I none Chenopodium quinoa AUR62037259 R-CQI-9025372 AUR62037259 [endoplasmic reticulum membrane] R-CQI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119402 Phospholipid biosynthesis I none Chenopodium quinoa AUR62037577 R-CQI-9675827-2 AUR62037577 [nucleoplasm] R-CQI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675782 Maturation none Chenopodium quinoa AUR62037577 R-CQI-9675827-2 AUR62037577 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62037577 R-CQI-9675827-2 AUR62037577 [nucleoplasm] R-CQI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675885 Lagging strand synthesis none Chenopodium quinoa AUR62037582 R-CQI-1123733-2 AUR62037582 [cytosol] R-CQI-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119484 Folate polyglutamylation II none Chenopodium quinoa AUR62037591 R-CQI-5632315 AUR62037591 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62037591 R-CQI-5632284 phospho-AUR62037591 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62037591 R-CQI-5632342 phospho-AUR62037591 [cytosol] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62037591 R-CQI-5632315 AUR62037591 [nucleoplasm] R-CQI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5679411 Gibberellin signaling none Chenopodium quinoa AUR62037641 R-CQI-5149643-2 AUR62037641 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62037642 R-CQI-5149657 AUR62037642 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62037642 R-CQI-1129239 AUR62037642 [cytosol] R-CQI-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119570 Cytosolic glycolysis none Chenopodium quinoa AUR62037644 R-CQI-1128626 AUR62037644 [cytosol] R-CQI-1119581 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119581 Thiosulfate disproportionation III (rhodanese) none Chenopodium quinoa AUR62037644 R-CQI-1128626 AUR62037644 [cytosol] R-CQI-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119612 Cysteine degradation none Chenopodium quinoa AUR62037657 R-CQI-1125920 AUR62037657 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62037657 R-CQI-1125920 AUR62037657 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62037661 R-CQI-1130456-2 AUR62037661 [plastid stroma] R-CQI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119430 Chorismate biosynthesis none Chenopodium quinoa AUR62037667 R-CQI-1127192 AUR62037667 [cytosol] R-CQI-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119291 Nitrate assimilation none Chenopodium quinoa AUR62037667 R-CQI-1127192 AUR62037667 [cytosol] R-CQI-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119293 Glutamine biosynthesis I none Chenopodium quinoa AUR62037667 R-CQI-1127192 AUR62037667 [cytosol] R-CQI-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119443 Ammonia assimilation cycle none Chenopodium quinoa AUR62037757 R-CQI-5608161-2 AUR62037757 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62037771 R-CQI-1124138 AUR62037771 [cytosol] R-CQI-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119394 Pantothenate and coenzyme A biosynthesis III none Chenopodium quinoa AUR62037807 R-CQI-1126354-4 AUR62037807 [cytosol] R-CQI-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119513 Pinobanksin biosynthesis none Chenopodium quinoa AUR62037807 R-CQI-1126354-4 AUR62037807 [cytosol] R-CQI-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119531 Flavonoid biosynthesis none Chenopodium quinoa AUR62037807 R-CQI-1126354-4 AUR62037807 [cytosol] R-CQI-1119630 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119630 Resveratrol biosynthesis none Chenopodium quinoa AUR62037809 R-CQI-1126354-2 AUR62037809 [cytosol] R-CQI-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119513 Pinobanksin biosynthesis none Chenopodium quinoa AUR62037809 R-CQI-1126354-2 AUR62037809 [cytosol] R-CQI-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119531 Flavonoid biosynthesis none Chenopodium quinoa AUR62037809 R-CQI-1126354-2 AUR62037809 [cytosol] R-CQI-1119630 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119630 Resveratrol biosynthesis none Chenopodium quinoa AUR62037846 R-CQI-5608218 AUR62037846 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62037846 R-CQI-5608218 AUR62037846 [nucleoplasm] R-CQI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9608575 Reproductive meristem phase change none Chenopodium quinoa AUR62037846 R-CQI-9658968 AUR62037846 [cytosol] R-CQI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9608575 Reproductive meristem phase change none Chenopodium quinoa AUR62037855 R-CQI-1130141 AUR62037855 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62037855 R-CQI-1130141 AUR62037855 [mitochondrial matrix] R-CQI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119540 Leucine biosynthesis none Chenopodium quinoa AUR62037882 R-CQI-8879061 LOS2 homolog [nucleoplasm] R-CQI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8879007 Response to cold temperature none Chenopodium quinoa AUR62037916 R-CQI-5655007-2 AUR62037916 [Golgi lumen] R-CQI-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5655010 Xylogalacturonan biosynthesis none Chenopodium quinoa AUR62037925 R-CQI-1127031 AUR62037925 [cytosol] R-CQI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119460 Isoleucine biosynthesis from threonine none Chenopodium quinoa AUR62037992 R-CQI-1125766 AUR62037992 [cytosol] R-CQI-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119557 GA12 biosynthesis none Chenopodium quinoa AUR62037993 R-CQI-1125766-5 AUR62037993 [cytosol] R-CQI-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119557 GA12 biosynthesis none Chenopodium quinoa AUR62038008 R-CQI-1128197 AUR62038008 [plastid stroma] R-CQI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119430 Chorismate biosynthesis none Chenopodium quinoa AUR62038010 R-CQI-1129282-2 AUR62038010 [cytosol] R-CQI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119428 GDP-D-rhamnose biosynthesis none Chenopodium quinoa AUR62038010 R-CQI-1129282-2 AUR62038010 [cytosol] R-CQI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Chenopodium quinoa AUR62038016 R-CQI-6787276-2 AUR62038016 [plastid stroma] R-CQI-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119261 Salicylate biosynthesis none Chenopodium quinoa AUR62038016 R-CQI-6787950-2 AUR62038016 [nucleoplasm] R-CQI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6788019 Salicylic acid signaling none Chenopodium quinoa AUR62038040 R-CQI-1127562-4 AUR62038040 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62038040 R-CQI-1130466-4 AUR62038040 [cytosol] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62038326 R-CQI-9025430 AUR62038326 [endoplasmic reticulum membrane] R-CQI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119325 Sphingolipid metabolism none Chenopodium quinoa AUR62038336 R-CQI-5632264-3 AUR62038336 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62038367 R-CQI-1122347-2 AUR62038367 [cytosol] R-CQI-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119384 NAD biosynthesis I (from aspartate) none Chenopodium quinoa AUR62038380 R-CQI-1129818-7 AUR62038380 [mitochondrial matrix] R-CQI-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119365 Lysine degradation II none Chenopodium quinoa AUR62038380 R-CQI-1173242-7 AUR62038380 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62038431 R-CQI-1127089 AUR62038431 [cytosol] R-CQI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119465 Sucrose biosynthesis none Chenopodium quinoa AUR62038453 R-CQI-9675838 AUR62038453 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62038456 R-CQI-1127743 AUR62038456 [cytosol] R-CQI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119428 GDP-D-rhamnose biosynthesis none Chenopodium quinoa AUR62038456 R-CQI-1125489 AUR62038456 [Golgi membrane] R-CQI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119574 UDP-L-arabinose biosynthesis and transport none Chenopodium quinoa AUR62038456 R-CQI-1127743 AUR62038456 [cytosol] R-CQI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Chenopodium quinoa AUR62038479 R-CQI-8987574-2 AUR62038479 [mitochondrial matrix] R-CQI-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119311 Glycine biosynthesis I none Chenopodium quinoa AUR62038577 R-CQI-1122843 AUR62038577 [cytosol] R-CQI-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119458 Glutamate degradation none Chenopodium quinoa AUR62038648 R-CQI-9924379 HSFA2D [nucleoplasm] R-CQI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924451 Shoot (tiller) formation and regulation of tiller angle none Chenopodium quinoa AUR62038677 R-CQI-4788601-4 AUR62038677 [plastid stroma] R-CQI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119509 Histidine biosynthesis I none Chenopodium quinoa AUR62038736 R-CQI-1130281 AUR62038736 [cytosol] R-CQI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119574 UDP-L-arabinose biosynthesis and transport none Chenopodium quinoa AUR62038763 R-CQI-9645872-2 AUR62038763 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62038821 R-CQI-9645907-2 AUR62038821 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62038821 R-CQI-9645907-2 AUR62038821 [nucleoplasm] R-CQI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675824 DNA replication Initiation none Chenopodium quinoa AUR62038831 R-CQI-9920344 AUR62038831 [nucleoplasm] R-CQI-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8934108 Short day regulated expression of florigens none Chenopodium quinoa AUR62038977 R-CQI-1129547-5 AUR62038977 [cytosol] R-CQI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119389 Phenylalanine biosynthesis I none Chenopodium quinoa AUR62038977 R-CQI-1129547-5 AUR62038977 [cytosol] R-CQI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119400 Methionine biosynthesis II none Chenopodium quinoa AUR62038977 R-CQI-1129547-5 AUR62038977 [cytosol] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62039005 R-CQI-1126157 AUR62039005 [cytosol] R-CQI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119460 Isoleucine biosynthesis from threonine none Chenopodium quinoa AUR62039005 R-CQI-1126157 AUR62039005 [cytosol] R-CQI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119600 Valine biosynthesis none Chenopodium quinoa AUR62039122 R-CQI-5679401 AUR62039122 [nucleoplasm] R-CQI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5679411 Gibberellin signaling none Chenopodium quinoa AUR62039130 R-CQI-5367743 AUR62039130 [cytosol] R-CQI-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5367729 Strigolactone biosynthesis none Chenopodium quinoa AUR62039178 R-CQI-5149643 AUR62039178 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62039184 R-CQI-1128626-2 AUR62039184 [cytosol] R-CQI-1119581 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119581 Thiosulfate disproportionation III (rhodanese) none Chenopodium quinoa AUR62039184 R-CQI-1128626-2 AUR62039184 [cytosol] R-CQI-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119612 Cysteine degradation none Chenopodium quinoa AUR62039196 R-CQI-1129569-4 AUR62039196 [cytosol] R-CQI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119379 Flavin biosynthesis none Chenopodium quinoa AUR62039211 R-CQI-6787863-2 AUR62039211 [nucleoplasm] R-CQI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6788019 Salicylic acid signaling none Chenopodium quinoa AUR62039216 R-CQI-9608694-3 AUR62039216 [cytosol] R-CQI-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9928831 Severe drought none Chenopodium quinoa AUR62039216 R-CQI-9928774-3 AUR62039216 [nucleoplasm] R-CQI-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9928831 Severe drought none Chenopodium quinoa AUR62039217 R-CQI-9608694-4 AUR62039217 [cytosol] R-CQI-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9928831 Severe drought none Chenopodium quinoa AUR62039217 R-CQI-9928774-4 AUR62039217 [nucleoplasm] R-CQI-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9928831 Severe drought none Chenopodium quinoa AUR62039254 R-CQI-1129507 AUR62039254 [cytosol] R-CQI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119452 Galactose degradation II none Chenopodium quinoa AUR62039263 R-CQI-9675790 AUR62039263 [nucleoplasm] R-CQI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675824 DNA replication Initiation none Chenopodium quinoa AUR62039279 R-CQI-8933856 AUR62039279 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62039279 R-CQI-8933748 AUR62039279 [cytosol] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62039279 R-CQI-8933856 AUR62039279 [nucleoplasm] R-CQI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8934036 Long day regulated expression of florigens none Chenopodium quinoa AUR62039279 R-CQI-8933856 AUR62039279 [nucleoplasm] R-CQI-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9928995 Drought escape (DE) via ABA-dependent pathway none Chenopodium quinoa AUR62039293 R-CQI-1128974-3 AUR62039293 [cytosol] R-CQI-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119287 Vitamin E biosynthesis none Chenopodium quinoa AUR62039293 R-CQI-1128974-3 AUR62039293 [cytosol] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62039297 R-CQI-1128974-2 AUR62039297 [cytosol] R-CQI-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119287 Vitamin E biosynthesis none Chenopodium quinoa AUR62039297 R-CQI-1128974-2 AUR62039297 [cytosol] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62039301 R-CQI-1128974-5 AUR62039301 [cytosol] R-CQI-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119287 Vitamin E biosynthesis none Chenopodium quinoa AUR62039301 R-CQI-1128974-5 AUR62039301 [cytosol] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62039303 R-CQI-9640701-2 AUR62039303 [nucleoplasm] R-CQI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640882 Assembly of pre-replication complex none Chenopodium quinoa AUR62039303 R-CQI-9640701-2 AUR62039303 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62039326 R-CQI-8854121-7 AUR62039326 [cytosol] R-CQI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119556 Choline biosynthesis I none Chenopodium quinoa AUR62039335 R-CQI-9826652 OSH15 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62039335 R-CQI-9631619 AUR62039335 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62039336 R-CQI-1122974-2 AUR62039336 [mitochondrial matrix] R-CQI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119479 Valine degradation none Chenopodium quinoa AUR62039367 R-CQI-9684723-3 AUR62039367 [cytosol] R-CQI-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9609102 Flower development none Chenopodium quinoa AUR62039374 R-CQI-5149632-2 AUR62039374 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62039375 R-CQI-9675820 AUR62039375 [nucleoplasm] R-CQI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675824 DNA replication Initiation none Chenopodium quinoa AUR62039383 R-CQI-1125877 AUR62039383 [cytosol] R-CQI-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119456 Brassinosteroid biosynthesis II none Chenopodium quinoa AUR62039398 R-CQI-1130416-2 AUR62039398 [mitochondrial matrix] R-CQI-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119337 Proline degradation none Chenopodium quinoa AUR62039398 R-CQI-1130416-2 AUR62039398 [mitochondrial matrix] R-CQI-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119495 Citrulline biosynthesis none Chenopodium quinoa AUR62039456 R-CQI-5632139-2 AUR62039456 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62039462 R-CQI-1124491-2 AUR62039462 [plasma membrane] R-CQI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119314 Cellulose biosynthesis none Chenopodium quinoa AUR62039497 R-CQI-9618197 AUR62039497 [plasma membrane] R-CQI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9618218 Arsenic uptake and detoxification none Chenopodium quinoa AUR62039498 R-CQI-9618197-2 AUR62039498 [plasma membrane] R-CQI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9618218 Arsenic uptake and detoxification none Chenopodium quinoa AUR62039518 R-CQI-9918159-2 AUR62039518 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62039523 R-CQI-5679455 AUR62039523 [nucleoplasm] R-CQI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5679411 Gibberellin signaling none Chenopodium quinoa AUR62039523 R-CQI-6787020 AUR62039523 [cytosol] R-CQI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-6787011 Jasmonic acid signaling none Chenopodium quinoa AUR62039535 R-CQI-1128632-2 AUR62039535 [cytosol] R-CQI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119465 Sucrose biosynthesis none Chenopodium quinoa AUR62039535 R-CQI-1128632-2 AUR62039535 [cytosol] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62039546 R-CQI-5608213-3 AUR62039546 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62039549 R-CQI-1123250 AUR62039549 [cytosol] R-CQI-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119265 Tetrahydrofolate biosynthesis I none Chenopodium quinoa AUR62039549 R-CQI-1123250 AUR62039549 [cytosol] R-CQI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119523 Tetrahydrofolate biosynthesis II none Chenopodium quinoa AUR62039561 R-CQI-8868990 AUR62039561 [endoplasmic reticulum membrane] R-CQI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8868949 Intracellular auxin transport none Chenopodium quinoa AUR62039630 R-CQI-1124778-2 AUR62039630 [plastid stroma] R-CQI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119464 Methylerythritol phosphate pathway none Chenopodium quinoa AUR62039633 R-CQI-1129846 AUR62039633 [mitochondrion] R-CQI-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119337 Proline degradation none Chenopodium quinoa AUR62039633 R-CQI-1129846 AUR62039633 [mitochondrion] R-CQI-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119458 Glutamate degradation none Chenopodium quinoa AUR62039641 R-CQI-9618056-3 AUR62039641 [plasma membrane] R-CQI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9618218 Arsenic uptake and detoxification none Chenopodium quinoa AUR62039654 R-CQI-9639171-2 AUR62039654 [plant-type vacuole membrane] R-CQI-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639136 Response to Aluminum stress none Chenopodium quinoa AUR62039661 R-CQI-9681910 AUR62039661 [Golgi membrane] R-CQI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119574 UDP-L-arabinose biosynthesis and transport none Chenopodium quinoa AUR62039664 R-CQI-5632199 AUR62039664 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62039670 R-CQI-5654755 AUR62039670 [cytosol] R-CQI-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119393 Asparagine degradation I none Chenopodium quinoa AUR62039696 R-CQI-1123161-3 AUR62039696 [chloroplast] R-CQI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119494 Tryptophan biosynthesis none Chenopodium quinoa AUR62039699 R-CQI-5367761-3 AUR62039699 [plastid stroma] R-CQI-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5367729 Strigolactone biosynthesis none Chenopodium quinoa AUR62039712 R-CQI-1125151-3 AUR62039712 [cytosol] R-CQI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119400 Methionine biosynthesis II none Chenopodium quinoa AUR62039712 R-CQI-1125151-3 AUR62039712 [cytosol] R-CQI-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119501 S-adenosyl-L-methionine cycle none Chenopodium quinoa AUR62039784 R-CQI-1129466 AUR62039784 [cytosol] R-CQI-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119449 Carotenoid biosynthesis none Chenopodium quinoa AUR62039803 R-CQI-9618131 AUR62039803 [plasma membrane] R-CQI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9618218 Arsenic uptake and detoxification none Chenopodium quinoa AUR62039808 R-CQI-1130101 AUR62039808 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62039870 R-CQI-5608161-3 AUR62039870 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62039879 R-CQI-1130235-2 AUR62039879 [cytosol] R-CQI-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119261 Salicylate biosynthesis none Chenopodium quinoa AUR62039879 R-CQI-1130235-2 AUR62039879 [cytosol] R-CQI-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119418 Suberin biosynthesis none Chenopodium quinoa AUR62039879 R-CQI-1130235-2 AUR62039879 [cytosol] R-CQI-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119582 Phenylpropanoid biosynthesis, initial reactions none Chenopodium quinoa AUR62039880 R-CQI-1129851-2 AUR62039880 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62039880 R-CQI-1129851-2 AUR62039880 [mitochondrial matrix] R-CQI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119540 Leucine biosynthesis none Chenopodium quinoa AUR62039932 R-CQI-1126888-3 AUR62039932 [cytosol] R-CQI-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119360 Fructan biosynthesis none Chenopodium quinoa AUR62040038 R-CQI-5654933 AUR62040038 [Golgi lumen] R-CQI-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5654909 Xylan biosynthesis none Chenopodium quinoa AUR62040067 R-CQI-4827040-2 AUR62040067 [plastid stroma] R-CQI-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-4827054 Tetrapyrrole biosynthesis I none Chenopodium quinoa AUR62040116 R-CQI-1127292 AUR62040116 [plastid stroma] R-CQI-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Chenopodium quinoa AUR62040256 R-CQI-8933816-2 AUR62040256 [nucleoplasm] R-CQI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8933811 Circadian rhythm none Chenopodium quinoa AUR62040272 R-CQI-1123092 AUR62040272 [cytosol] R-CQI-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119278 PRPP biosynthesis I none Chenopodium quinoa AUR62040284 R-CQI-1123210 AUR62040284 [cytosol] R-CQI-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119516 Trehalose biosynthesis I none Chenopodium quinoa AUR62040296 R-CQI-1123477 AUR62040296 [cytosol] R-CQI-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119451 Xylose degradation none Chenopodium quinoa AUR62040301 R-CQI-1122463 AUR62040301 [cytosol] R-CQI-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119321 Glycerol degradation I none Chenopodium quinoa AUR62040306 R-CQI-1124048 AUR62040306 [cytosol] R-CQI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119610 Biotin biosynthesis II none Chenopodium quinoa AUR62040310 R-CQI-1125406-3 AUR62040310 [cytosol] R-CQI-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119418 Suberin biosynthesis none Chenopodium quinoa AUR62040328 R-CQI-9675357-2 AUR62040328 [nucleoplasm] R-CQI-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030680 Crown root development none Chenopodium quinoa AUR62040382 R-CQI-1129629 AUR62040382 [plastid stroma] R-CQI-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119293 Glutamine biosynthesis I none Chenopodium quinoa AUR62040382 R-CQI-1129629 AUR62040382 [plastid stroma] R-CQI-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119443 Ammonia assimilation cycle none Chenopodium quinoa AUR62040449 R-CQI-9618056 AUR62040449 [plasma membrane] R-CQI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9618218 Arsenic uptake and detoxification none Chenopodium quinoa AUR62040466 R-CQI-1129851 AUR62040466 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62040466 R-CQI-1129851 AUR62040466 [mitochondrial matrix] R-CQI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119540 Leucine biosynthesis none Chenopodium quinoa AUR62040467 R-CQI-1130235 AUR62040467 [cytosol] R-CQI-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119261 Salicylate biosynthesis none Chenopodium quinoa AUR62040467 R-CQI-1130235 AUR62040467 [cytosol] R-CQI-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119418 Suberin biosynthesis none Chenopodium quinoa AUR62040467 R-CQI-1130235 AUR62040467 [cytosol] R-CQI-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119582 Phenylpropanoid biosynthesis, initial reactions none Chenopodium quinoa AUR62040483 R-CQI-9658573-2 AUR62040483 [endoplasmic reticulum lumen] R-CQI-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119502 Allantoin degradation none Chenopodium quinoa AUR62040687 R-CQI-1125928 AUR62040687 [cytosol] R-CQI-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119484 Folate polyglutamylation II none Chenopodium quinoa AUR62040687 R-CQI-1125928 AUR62040687 [cytosol] R-CQI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119523 Tetrahydrofolate biosynthesis II none Chenopodium quinoa AUR62040687 R-CQI-1125928 AUR62040687 [cytosol] R-CQI-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119617 Folate polyglutamylation I none Chenopodium quinoa AUR62040689 R-CQI-1127913 AUR62040689 [cytosol] R-CQI-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119495 Citrulline biosynthesis none Chenopodium quinoa AUR62040689 R-CQI-1127913 AUR62040689 [cytosol] R-CQI-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119631 Proline biosynthesis I none Chenopodium quinoa AUR62040691 R-CQI-1130202 AUR62040691 [cytosol] R-CQI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119410 Ascorbate biosynthesis none Chenopodium quinoa AUR62040699 R-CQI-4415078-2 AUR62040699 [cytosol] R-CQI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-3899351 Abscisic acid (ABA) mediated signaling none Chenopodium quinoa AUR62040723 R-CQI-1128257 AUR62040723 [plastid stroma] R-CQI-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119529 Sulfate activation for sulfonation none Chenopodium quinoa AUR62040729 R-CQI-4723654 AUR62040729 [plastid stroma] R-CQI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119464 Methylerythritol phosphate pathway none Chenopodium quinoa AUR62040729 R-CQI-1130030 AUR62040729 [cytosol] R-CQI-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119594 Pyridoxal 5'-phosphate biosynthesis none Chenopodium quinoa AUR62040729 R-CQI-1130030 AUR62040729 [cytosol] R-CQI-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119629 Thiamine biosynthesis none Chenopodium quinoa AUR62040749 R-CQI-5149657-2 AUR62040749 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62040749 R-CQI-1129239-2 AUR62040749 [cytosol] R-CQI-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119570 Cytosolic glycolysis none Chenopodium quinoa AUR62040796 R-CQI-9918274-2 SBE1 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62040796 R-CQI-9626342-2 AUR62040796 [plastid stroma] R-CQI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9626305 Regulatory network of nutrient accumulation none Chenopodium quinoa AUR62040828 R-CQI-1123042 AUR62040828 R-CQI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119400 Methionine biosynthesis II none Chenopodium quinoa AUR62040834 R-CQI-1122326 AUR62040834 [cytosol] R-CQI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119438 Secologanin and strictosidine biosynthesis none Chenopodium quinoa AUR62040845 R-CQI-5631958 AUR62040845 [cytosol] R-CQI-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119289 Arginine degradation none Chenopodium quinoa AUR62040845 R-CQI-1122345 AUR62040845 [cytosol] R-CQI-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119318 Proline biosynthesis V (from arginine) none Chenopodium quinoa AUR62040845 R-CQI-1122345 AUR62040845 [cytosol] R-CQI-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119631 Proline biosynthesis I none Chenopodium quinoa AUR62040846 R-CQI-1122832-2 AUR62040846 [plastid stroma] R-CQI-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119449 Carotenoid biosynthesis none Chenopodium quinoa AUR62040849 R-CQI-1129809 AUR62040849 [mitochondrial inner membrane] R-CQI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119410 Ascorbate biosynthesis none Chenopodium quinoa AUR62040887 R-CQI-9025508 AUR62040887 [endoplasmic reticulum membrane] R-CQI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119325 Sphingolipid metabolism none Chenopodium quinoa AUR62040896 R-CQI-9611864-2 AUR62040896 [mitochondrial matrix] R-CQI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119479 Valine degradation none Chenopodium quinoa AUR62040931 R-CQI-5632268 AUR62040931 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62040934 R-CQI-1128298 AUR62040934 [cytosol] R-CQI-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119271 Threonine degradation none Chenopodium quinoa AUR62040934 R-CQI-1128298 AUR62040934 [cytosol] R-CQI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119610 Biotin biosynthesis II none Chenopodium quinoa AUR62040946 R-CQI-1129818-4 AUR62040946 [mitochondrial matrix] R-CQI-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119365 Lysine degradation II none Chenopodium quinoa AUR62040946 R-CQI-1173242-4 AUR62040946 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62040957 R-CQI-4788601-2 AUR62040957 [plastid stroma] R-CQI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119509 Histidine biosynthesis I none Chenopodium quinoa AUR62040986 R-CQI-9640786-2 AUR62040986 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62040986 R-CQI-9640786-2 AUR62040986 [nucleoplasm] R-CQI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675824 DNA replication Initiation none Chenopodium quinoa AUR62041007 R-CQI-9639217 AUR62041007 [plasma membrane] R-CQI-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639136 Response to Aluminum stress none Chenopodium quinoa AUR62041045 R-CQI-1130456 AUR62041045 [plastid stroma] R-CQI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119430 Chorismate biosynthesis none Chenopodium quinoa AUR62041056 R-CQI-1127192-2 AUR62041056 [cytosol] R-CQI-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119291 Nitrate assimilation none Chenopodium quinoa AUR62041056 R-CQI-1127192-2 AUR62041056 [cytosol] R-CQI-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119293 Glutamine biosynthesis I none Chenopodium quinoa AUR62041056 R-CQI-1127192-2 AUR62041056 [cytosol] R-CQI-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119443 Ammonia assimilation cycle none Chenopodium quinoa AUR62041122 R-CQI-1128263 AUR62041122 [plastid stroma] R-CQI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119509 Histidine biosynthesis I none Chenopodium quinoa AUR62041135 R-CQI-1125309 AUR62041135 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62041280 R-CQI-9025819-4 AUR62041280 [plasma membrane] R-CQI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9025727 Iron uptake and transport in root vascular system none Chenopodium quinoa AUR62041284 R-CQI-1130059 AUR62041284 [cytosol] R-CQI-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119262 Threonine biosynthesis from homoserine none Chenopodium quinoa AUR62041297 R-CQI-9025351-2 AUR62041297 [cytosol] R-CQI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119402 Phospholipid biosynthesis I none Chenopodium quinoa AUR62041384 R-CQI-1130247 AUR62041384 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62041416 R-CQI-1127922-2 AUR62041416 [cytosol] R-CQI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119370 Sterol biosynthesis none Chenopodium quinoa AUR62041432 R-CQI-5149646 AUR62041432 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62041432 R-CQI-1126652 AUR62041432 [cytosol] R-CQI-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119570 Cytosolic glycolysis none Chenopodium quinoa AUR62041490 R-CQI-1125920-2 AUR62041490 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62041490 R-CQI-1125920-2 AUR62041490 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62041503 R-CQI-9640763-3 AUR62041503 [nucleoplasm] R-CQI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640887 G1/S transition none Chenopodium quinoa AUR62041503 R-CQI-9640885-3 phospho-AUR62041503 [nucleoplasm] R-CQI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640887 G1/S transition none Chenopodium quinoa AUR62041510 R-CQI-9639810 AUR62041510 [cell wall] R-CQI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9639861 Development of root hair none Chenopodium quinoa AUR62041546 R-CQI-9626474 AUR62041546 [trans-Golgi network membrane] R-CQI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9626305 Regulatory network of nutrient accumulation none Chenopodium quinoa AUR62041588 R-CQI-5632319 phospho-AUR62041588 [plasma membrane] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62041592 R-CQI-5679470 AUR62041592 [nucleoplasm] R-CQI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5679411 Gibberellin signaling none Chenopodium quinoa AUR62041664 R-CQI-5654750 AUR62041664 [cytosol] R-CQI-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119393 Asparagine degradation I none Chenopodium quinoa AUR62041667 R-CQI-1129208-4 AUR62041667 [chloroplast envelope] R-CQI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119402 Phospholipid biosynthesis I none Chenopodium quinoa AUR62041671 R-CQI-5632334 AUR62041671 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62041671 R-CQI-5632197 phospho-AUR62041671 [nucleoplasm] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62041671 R-CQI-5632183 phospho-AUR62041671 [cytosol] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62041671 R-CQI-5632334 AUR62041671 [nucleoplasm] R-CQI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5679411 Gibberellin signaling none Chenopodium quinoa AUR62041688 R-CQI-5608102 AUR62041688 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62041688 R-CQI-1123690-2 AUR62041688 [nucleoplasm] R-CQI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5608118 Auxin signalling none Chenopodium quinoa AUR62041705 R-CQI-9930242-2 AUR62041705 [nucleoplasm] R-CQI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9766881 TF network involved in salinity response none Chenopodium quinoa AUR62041708 R-CQI-1127527-3 AUR62041708 [cytosol] R-CQI-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Chenopodium quinoa AUR62041719 R-CQI-5654957-2 AUR62041719 [Golgi lumen] R-CQI-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5654909 Xylan biosynthesis none Chenopodium quinoa AUR62041779 R-CQI-5654933-2 AUR62041779 [Golgi lumen] R-CQI-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5654909 Xylan biosynthesis none Chenopodium quinoa AUR62041785 R-CQI-8987473 AUR62041785 [peroxisomal matrix] R-CQI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119312 Photorespiration none Chenopodium quinoa AUR62041785 R-CQI-1124984 AUR62041785 [cytosol] R-CQI-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119596 Glutamate biosynthesis I none Chenopodium quinoa AUR62041840 R-CQI-4723660 AUR62041840 [plastid stroma] R-CQI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119464 Methylerythritol phosphate pathway none Chenopodium quinoa AUR62041840 R-CQI-1125869 AUR62041840 [cytosol] R-CQI-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119594 Pyridoxal 5'-phosphate biosynthesis none Chenopodium quinoa AUR62041840 R-CQI-1125869 AUR62041840 [cytosol] R-CQI-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119629 Thiamine biosynthesis none Chenopodium quinoa AUR62041898 R-CQI-9025513-3 AUR62041898 [endoplasmic reticulum membrane] R-CQI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119325 Sphingolipid metabolism none Chenopodium quinoa AUR62041898 R-CQI-1129700-3 AUR62041898 [cytosol] R-CQI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119610 Biotin biosynthesis II none Chenopodium quinoa AUR62042047 R-CQI-1122843-2 AUR62042047 [cytosol] R-CQI-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119458 Glutamate degradation none Chenopodium quinoa AUR62042095 R-CQI-9025329 AUR62042095 [chloroplast stroma] R-CQI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119402 Phospholipid biosynthesis I none Chenopodium quinoa AUR62042095 R-CQI-1125388 AUR62042095 [cytosol] R-CQI-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119496 Pantothenate biosynthesis I none Chenopodium quinoa AUR62042095 R-CQI-1125388 AUR62042095 [cytosol] R-CQI-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119544 Pantothenate biosynthesis II none Chenopodium quinoa AUR62042103 R-CQI-9640786 AUR62042103 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62042103 R-CQI-9640786 AUR62042103 [nucleoplasm] R-CQI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675824 DNA replication Initiation none Chenopodium quinoa AUR62042109 R-CQI-5654840 AUR62042109 [nucleoplasm] R-CQI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5654828 Strigolactone signaling none Chenopodium quinoa AUR62042109 R-CQI-5654840 AUR62042109 [nucleoplasm] R-CQI-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Chenopodium quinoa AUR62042116 R-CQI-9675357 AUR62042116 [nucleoplasm] R-CQI-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030680 Crown root development none Chenopodium quinoa AUR62042168 R-CQI-5654911-2 AUR62042168 [Golgi lumen] R-CQI-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5654909 Xylan biosynthesis none Chenopodium quinoa AUR62042179 R-CQI-1124249 AUR62042179 [cytosol] R-CQI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119428 GDP-D-rhamnose biosynthesis none Chenopodium quinoa AUR62042179 R-CQI-1124249 AUR62042179 [cytosol] R-CQI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Chenopodium quinoa AUR62042241 R-CQI-1124242 AUR62042241 [plastid stroma] R-CQI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119464 Methylerythritol phosphate pathway none Chenopodium quinoa AUR62042248 R-CQI-1124935 AUR62042248 [cytosol] R-CQI-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119349 S-methylmethionine cycle none Chenopodium quinoa AUR62042376 R-CQI-8854127-3 AUR62042376 [cytosol] R-CQI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119556 Choline biosynthesis I none Chenopodium quinoa AUR62042396 R-CQI-9916124-2 OsPRX95 [extracellular region] R-CQI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119403 Removal of superoxide radicals none Chenopodium quinoa AUR62042396 R-CQI-9916124-2 OsPRX95 [extracellular region] R-CQI-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9607185 Generation of superoxide radicals none Chenopodium quinoa AUR62042438 R-CQI-9025500 AUR62042438 [endoplasmic reticulum membrane] R-CQI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119325 Sphingolipid metabolism none Chenopodium quinoa AUR62042443 R-CQI-5138489-2 AUR62042443 [plastid stroma] R-CQI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119263 Arginine biosynthesis none Chenopodium quinoa AUR62042443 R-CQI-1127893-2 AUR62042443 [cytosol] R-CQI-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119444 Canavanine biosynthesis none Chenopodium quinoa AUR62042443 R-CQI-5138489-2 AUR62042443 [plastid stroma] R-CQI-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119622 Arginine biosynthesis II (acetyl cycle) none Chenopodium quinoa AUR62042443 R-CQI-5138489-2 AUR62042443 [plastid stroma] R-CQI-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5633340 Citrulline-nitric oxide cycle none Chenopodium quinoa AUR62042463 R-CQI-5679470-2 AUR62042463 [nucleoplasm] R-CQI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5679411 Gibberellin signaling none Chenopodium quinoa AUR62042589 R-CQI-1126728 AUR62042589 [plastid stroma] R-CQI-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119424 Plastid glycolysis none Chenopodium quinoa AUR62042624 R-CQI-9611864 AUR62042624 [mitochondrial matrix] R-CQI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119479 Valine degradation none Chenopodium quinoa AUR62042674 R-CQI-1130202-2 AUR62042674 [cytosol] R-CQI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119410 Ascorbate biosynthesis none Chenopodium quinoa AUR62042693 R-CQI-1128973 AUR62042693 [cytosol] R-CQI-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Chenopodium quinoa AUR62042693 R-CQI-1128973 AUR62042693 [cytosol] R-CQI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119438 Secologanin and strictosidine biosynthesis none Chenopodium quinoa AUR62042693 R-CQI-1128973 AUR62042693 [cytosol] R-CQI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119486 IAA biosynthesis I none Chenopodium quinoa AUR62042704 R-CQI-1128678 AUR62042704 [cytosol] R-CQI-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119292 Cytokinins 7-N-glucoside biosynthesis none Chenopodium quinoa AUR62042704 R-CQI-1128678 AUR62042704 [cytosol] R-CQI-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119375 Cytokinins 9-N-glucoside biosynthesis none Chenopodium quinoa AUR62042704 R-CQI-1128678 AUR62042704 [cytosol] R-CQI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119473 Cytokinins-O-glucoside biosynthesis none Chenopodium quinoa AUR62042716 R-CQI-9640785 AUR62042716 [nucleoplasm] R-CQI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640882 Assembly of pre-replication complex none Chenopodium quinoa AUR62042716 R-CQI-9640785 AUR62042716 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62042727 R-CQI-9920344-2 AUR62042727 [nucleoplasm] R-CQI-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8934108 Short day regulated expression of florigens none Chenopodium quinoa AUR62042764 R-CQI-9640716-2 AUR62042764 [nucleoplasm] R-CQI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9030654 Primary root development none Chenopodium quinoa AUR62042764 R-CQI-9640716-2 AUR62042764 [nucleoplasm] R-CQI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9640882 Assembly of pre-replication complex none Chenopodium quinoa AUR62042764 R-CQI-9640716-2 AUR62042764 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62042800 R-CQI-9658573 AUR62042800 [endoplasmic reticulum lumen] R-CQI-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119502 Allantoin degradation none Chenopodium quinoa AUR62042906 R-CQI-1127625-2 AUR62042906 [cytosol] R-CQI-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119265 Tetrahydrofolate biosynthesis I none Chenopodium quinoa AUR62042906 R-CQI-1127625-2 AUR62042906 [cytosol] R-CQI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119523 Tetrahydrofolate biosynthesis II none Chenopodium quinoa AUR62042911 R-CQI-8868866-3 AUR62042911 [endoplasmic reticulum membrane] R-CQI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8868949 Intracellular auxin transport none Chenopodium quinoa AUR62042921 R-CQI-5138500 AUR62042921 [plastid stroma] R-CQI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119263 Arginine biosynthesis none Chenopodium quinoa AUR62042921 R-CQI-1129397 AUR62042921 [cytosol] R-CQI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119273 Lysine biosynthesis I none Chenopodium quinoa AUR62042921 R-CQI-1129397 AUR62042921 [cytosol] R-CQI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119283 Lysine biosynthesis II none Chenopodium quinoa AUR62042921 R-CQI-1129397 AUR62042921 [cytosol] R-CQI-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119295 Homoserine biosynthesis none Chenopodium quinoa AUR62042921 R-CQI-5138500 AUR62042921 [plastid stroma] R-CQI-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119539 Ornithine biosynthesis none Chenopodium quinoa AUR62042921 R-CQI-5138500 AUR62042921 [plastid stroma] R-CQI-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119622 Arginine biosynthesis II (acetyl cycle) none Chenopodium quinoa AUR62042942 R-CQI-1127082 AUR62042942 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62043087 R-CQI-5221144-2 AUR62043087 [plastid] R-CQI-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119374 Abscisic acid biosynthesis none Chenopodium quinoa AUR62043102 R-CQI-8986695 AUR62043102 [endoplasmic reticulum membrane] R-CQI-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8986768 Anther and pollen development none Chenopodium quinoa AUR62043103 R-CQI-8986695-2 AUR62043103 [endoplasmic reticulum membrane] R-CQI-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8986768 Anther and pollen development none Chenopodium quinoa AUR62043105 R-CQI-1124067 AUR62043105 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62043105 R-CQI-9626520 AUR62043105 [plastid stroma] R-CQI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9626305 Regulatory network of nutrient accumulation none Chenopodium quinoa AUR62043274 R-CQI-1130210 AUR62043274 [cytosol] R-CQI-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119586 Cyanate degradation none Chenopodium quinoa AUR62043360 R-CQI-1124809-2 AUR62043360 [cytosol] R-CQI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119486 IAA biosynthesis I none Chenopodium quinoa AUR62043372 R-CQI-1130136-2 AUR62043372 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62043372 R-CQI-1130136-2 AUR62043372 [mitochondrial matrix] R-CQI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119540 Leucine biosynthesis none Chenopodium quinoa AUR62043382 R-CQI-1125766-3 AUR62043382 [cytosol] R-CQI-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119557 GA12 biosynthesis none Chenopodium quinoa AUR62043383 R-CQI-1125766-7 AUR62043383 [cytosol] R-CQI-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119557 GA12 biosynthesis none Chenopodium quinoa AUR62043387 R-CQI-5632232 phospho-AUR62043387 [plasma membrane] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62043393 R-CQI-1127527 AUR62043393 [cytosol] R-CQI-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Chenopodium quinoa AUR62043484 R-CQI-9675877-3 AUR62043484 [nucleoplasm] R-CQI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675815 Leading strand synthesis none Chenopodium quinoa AUR62043524 R-CQI-8986695-3 AUR62043524 [endoplasmic reticulum membrane] R-CQI-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8986768 Anther and pollen development none Chenopodium quinoa AUR62043525 R-CQI-8986695-5 AUR62043525 [endoplasmic reticulum membrane] R-CQI-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8986768 Anther and pollen development none Chenopodium quinoa AUR62043620 R-CQI-1128257-2 AUR62043620 [plastid stroma] R-CQI-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119529 Sulfate activation for sulfonation none Chenopodium quinoa AUR62043666 R-CQI-8987448-2 AUR62043666 [peroxisomal matrix] R-CQI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119312 Photorespiration none Chenopodium quinoa AUR62043702 R-CQI-1130136-4 AUR62043702 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62043702 R-CQI-1130136-4 AUR62043702 [mitochondrial matrix] R-CQI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119540 Leucine biosynthesis none Chenopodium quinoa AUR62043704 R-CQI-9645907 AUR62043704 [nucleoplasm] R-CQI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9645850 Activation of pre-replication complex none Chenopodium quinoa AUR62043704 R-CQI-9645907 AUR62043704 [nucleoplasm] R-CQI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9675824 DNA replication Initiation none Chenopodium quinoa AUR62043726 R-CQI-9611889-3 AUR62043726 [mitochondrial matrix] R-CQI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119479 Valine degradation none Chenopodium quinoa AUR62043820 R-CQI-1130136-3 AUR62043820 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62043820 R-CQI-1130136-3 AUR62043820 [mitochondrial matrix] R-CQI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119540 Leucine biosynthesis none Chenopodium quinoa AUR62043947 R-CQI-5084918 AUR62043947 [cytosol] R-CQI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119624 Methionine salvage pathway none Chenopodium quinoa AUR62043948 R-CQI-5084918-5 AUR62043948 [cytosol] R-CQI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119624 Methionine salvage pathway none Chenopodium quinoa AUR62044024 R-CQI-1130308 AUR62044024 [plastid stroma] R-CQI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119430 Chorismate biosynthesis none Chenopodium quinoa AUR62044031 R-CQI-9916309-3 CPK3 [plasma membrane] R-CQI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9916190 Root angle formation: elongation and curvature response none Chenopodium quinoa AUR62044102 R-CQI-5149676 AUR62044102 [plastid stroma] R-CQI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119519 Calvin cycle none Chenopodium quinoa AUR62044145 R-CQI-9826620 HOX12/ OsGT1 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AUR62044145 R-CQI-9826620 HOX12/ OsGT1 [nucleoplasm] R-CQI-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Chenopodium quinoa AUR62044152 R-CQI-1125406-2 AUR62044152 [cytosol] R-CQI-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119418 Suberin biosynthesis none Chenopodium quinoa AUR62044157 R-CQI-8854127-4 AUR62044157 [cytosol] R-CQI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119556 Choline biosynthesis I none Chenopodium quinoa AUR62044208 R-CQI-8854127-5 AUR62044208 [cytosol] R-CQI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119556 Choline biosynthesis I none Chenopodium quinoa AUR62044218 R-CQI-9609343-2 AUR62044218 [cytosol] R-CQI-9609352 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9609352 Lycopene catabolism none Chenopodium quinoa AUR62044237 R-CQI-1129818-8 AUR62044237 [mitochondrial matrix] R-CQI-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119365 Lysine degradation II none Chenopodium quinoa AUR62044237 R-CQI-1173242-8 AUR62044237 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62044244 R-CQI-1129818-2 AUR62044244 [mitochondrial matrix] R-CQI-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119365 Lysine degradation II none Chenopodium quinoa AUR62044244 R-CQI-1173242-2 AUR62044244 [mitochondrial matrix] R-CQI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119533 TCA cycle (plant) none Chenopodium quinoa AUR62044272 R-CQI-1127243 AUR62044272 [amyloplast] R-CQI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119477 Starch biosynthesis none Chenopodium quinoa AUR62044273 R-CQI-1127491-2 AUR62044273 [chloroplast] R-CQI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119312 Photorespiration none Chenopodium quinoa AUR62044294 R-CQI-5367761-2 AUR62044294 [plastid stroma] R-CQI-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5367729 Strigolactone biosynthesis none Chenopodium quinoa AUR62044298 R-CQI-9916309 CPK3 [plasma membrane] R-CQI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9916190 Root angle formation: elongation and curvature response none Chenopodium quinoa AUR62044310 R-CQI-1123059 AUR62044310 [cytosol] R-CQI-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119317 Spermine biosynthesis none Chenopodium quinoa AUR62044310 R-CQI-1123059 AUR62044310 [cytosol] R-CQI-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119343 Spermidine biosynthesis none Chenopodium quinoa AUR62044351 R-CQI-1124496 AUR62044351 [cytosol] R-CQI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119615 Mevalonate pathway none Chenopodium quinoa AUR62044368 R-CQI-8986682 AUR62044368 [extracellular region] R-CQI-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8986768 Anther and pollen development none Chenopodium quinoa AUR62044428 R-CQI-1129769-3 AUR62044428 [cytosol] R-CQI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119332 Jasmonic acid biosynthesis none Chenopodium quinoa AUR62044428 R-CQI-1129769-3 AUR62044428 [cytosol] R-CQI-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119618 13-LOX and 13-HPL pathway none Chenopodium quinoa AUR62044463 R-CQI-1130210-2 AUR62044463 [cytosol] R-CQI-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119586 Cyanate degradation none Chenopodium quinoa AUR62044490 R-CQI-5632238-2 AUR62044490 [cytosol] R-CQI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5632095 Brassinosteroid signaling none Chenopodium quinoa AUR62044490 R-CQI-5632238-2 AUR62044490 [cytosol] R-CQI-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8934257 Transition from vegetative to reproductive shoot apical meristem none Chenopodium quinoa AUR62044490 R-CQI-9927894-2 AUR62044490 [nucleoplasm] R-CQI-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8934257 Transition from vegetative to reproductive shoot apical meristem none Chenopodium quinoa AUR62044490 R-CQI-5632238-2 AUR62044490 [cytosol] R-CQI-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9609102 Flower development none Chenopodium quinoa AUR62044490 R-CQI-5632238-2 AUR62044490 [cytosol] R-CQI-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9928831 Severe drought none Chenopodium quinoa AUR62044490 R-CQI-9927894-2 AUR62044490 [nucleoplasm] R-CQI-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9928831 Severe drought none Chenopodium quinoa AUR62044501 R-CQI-1129111-3 AUR62044501 [cytosol] R-CQI-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119349 S-methylmethionine cycle none Chenopodium quinoa AUR62044501 R-CQI-1129111-3 AUR62044501 [cytosol] R-CQI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119400 Methionine biosynthesis II none Chenopodium quinoa AUR62044509 R-CQI-8986695-4 AUR62044509 [endoplasmic reticulum membrane] R-CQI-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-8986768 Anther and pollen development none Chenopodium quinoa AUR62044533 R-CQI-1128974-4 AUR62044533 [cytosol] R-CQI-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119287 Vitamin E biosynthesis none Chenopodium quinoa AUR62044533 R-CQI-1128974-4 AUR62044533 [cytosol] R-CQI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119506 tyrosine degradation I none Chenopodium quinoa AUR62044562 R-CQI-1125406-4 AUR62044562 [cytosol] R-CQI-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-1119418 Suberin biosynthesis none Chenopodium quinoa AUR62044726 R-CQI-5679398 AUR62044726 [cytosol] R-CQI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-5679411 Gibberellin signaling none Chenopodium quinoa AUR62044773 R-CQI-9826666 AUR62044773 [nucleoplasm] R-CQI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-CQI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Chenopodium quinoa AVESA.00001b.r3.1Ag0000006 R-ASA-9609343-5 AVESA.00001b.r3.1Ag0000006 [cytosol] R-ASA-9609352 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609352 Lycopene catabolism none Avena sativa AVESA.00001b.r3.1Ag0000008 R-ASA-1125766 AVESA.00001b.r3.1Ag0000008 [cytosol] R-ASA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119557 GA12 biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0000077 R-ASA-1130088-3 AVESA.00001b.r3.1Ag0000077 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0000103 R-ASA-1128244 AVESA.00001b.r3.1Ag0000103 [chloroplast] R-ASA-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119348 Ent-kaurene biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0000116 R-ASA-1129569-3 AVESA.00001b.r3.1Ag0000116 [cytosol] R-ASA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119379 Flavin biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0000160 R-ASA-9675439 AVESA.00001b.r3.1Ag0000160 [mitochondrial matrix] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.1Ag0000206 R-ASA-1126165-3 AVESA.00001b.r3.1Ag0000206 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.1Ag0000214 R-ASA-9640786-2 AVESA.00001b.r3.1Ag0000214 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.1Ag0000214 R-ASA-9640786-2 AVESA.00001b.r3.1Ag0000214 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.1Ag0000214 R-ASA-9640786-2 AVESA.00001b.r3.1Ag0000214 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.1Ag0000229 R-ASA-6787257-3 AVESA.00001b.r3.1Ag0000229 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.1Ag0000229 R-ASA-6787976-3 AVESA.00001b.r3.1Ag0000229 [cytosol] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.1Ag0000229 R-ASA-6787257-3 AVESA.00001b.r3.1Ag0000229 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.1Ag0000252 R-ASA-1126892 AVESA.00001b.r3.1Ag0000252 [cytosol] R-ASA-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119353 Linear furanocoumarin biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0000324 R-ASA-9640698-3 AVESA.00001b.r3.1Ag0000324 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.1Ag0000338 R-ASA-9639029-2 AVESA.00001b.r3.1Ag0000338 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.1Ag0000423 R-ASA-1128528-2 AVESA.00001b.r3.1Ag0000423 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0000523 R-ASA-5632268-2 AVESA.00001b.r3.1Ag0000523 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.1Ag0000552 R-ASA-5608161 AVESA.00001b.r3.1Ag0000552 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.1Ag0000562 R-ASA-9828974-2 CKX3 [endoplasmic reticulum lumen] R-ASA-9828944 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9828944 Regulation of lemma joint development and leaf angle by cytokinin none Avena sativa AVESA.00001b.r3.1Ag0000601 R-ASA-9675845-3 AVESA.00001b.r3.1Ag0000601 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.1Ag0000624 R-ASA-1123250-2 AVESA.00001b.r3.1Ag0000624 [cytosol] R-ASA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119265 Tetrahydrofolate biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0000624 R-ASA-1123250-2 AVESA.00001b.r3.1Ag0000624 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.1Ag0000632 R-ASA-1128766 AVESA.00001b.r3.1Ag0000632 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.1Ag0000632 R-ASA-1128766 AVESA.00001b.r3.1Ag0000632 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0000637 R-ASA-1123296-3 AVESA.00001b.r3.1Ag0000637 [chloroplast envelope] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0000648 R-ASA-8879004-2 AVESA.00001b.r3.1Ag0000648 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.1Ag0000668 R-ASA-1125928 AVESA.00001b.r3.1Ag0000668 [cytosol] R-ASA-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119484 Folate polyglutamylation II none Avena sativa AVESA.00001b.r3.1Ag0000668 R-ASA-1125928 AVESA.00001b.r3.1Ag0000668 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.1Ag0000668 R-ASA-1125928 AVESA.00001b.r3.1Ag0000668 [cytosol] R-ASA-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119617 Folate polyglutamylation I none Avena sativa AVESA.00001b.r3.1Ag0000673 R-ASA-5146758-3 AVESA.00001b.r3.1Ag0000673 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.1Ag0000674 R-ASA-5146758 AVESA.00001b.r3.1Ag0000674 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.1Ag0000698 R-ASA-8987554 AVESA.00001b.r3.1Ag0000698 [mitochondrial matrix] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.1Ag0000702 R-ASA-9618171 AVESA.00001b.r3.1Ag0000702 [plasma membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.1Ag0000703 R-ASA-9618171-4 AVESA.00001b.r3.1Ag0000703 [plasma membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.1Ag0000707 R-ASA-1128613-2 AVESA.00001b.r3.1Ag0000707 [cytosol] R-ASA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119316 Phenylpropanoid biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0000748 R-ASA-3315084-3 AVESA.00001b.r3.1Ag0000748 [cytosol] R-ASA-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119342 Gamma-glutamyl cycle none Avena sativa AVESA.00001b.r3.1Ag0000758 R-ASA-8879001-3 AVESA.00001b.r3.1Ag0000758 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.1Ag0000787 R-ASA-6788007-2 AVESA.00001b.r3.1Ag0000787 [cytosol] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.1Ag0000823 R-ASA-1127899-3 AVESA.00001b.r3.1Ag0000823 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0000825 R-ASA-2885386-2 AVESA.00001b.r3.1Ag0000825 [cytosol] R-ASA-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119417 Stachyose biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0000838 R-ASA-4754220-2 AVESA.00001b.r3.1Ag0000838 [plastid stroma] R-ASA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119449 Carotenoid biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0000838 R-ASA-1126847-2 AVESA.00001b.r3.1Ag0000838 [cytosol] R-ASA-1119492 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119492 Lactucaxanthin biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0000851 R-ASA-1122593-3 AVESA.00001b.r3.1Ag0000851 [cytosol] R-ASA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119436 Peptidoglycan biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0000851 R-ASA-1122593-3 AVESA.00001b.r3.1Ag0000851 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.1Ag0000851 R-ASA-1122593-3 AVESA.00001b.r3.1Ag0000851 [cytosol] R-ASA-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119617 Folate polyglutamylation I none Avena sativa AVESA.00001b.r3.1Ag0000853 R-ASA-1123757-2 AVESA.00001b.r3.1Ag0000853 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.1Ag0000853 R-ASA-1123757-2 AVESA.00001b.r3.1Ag0000853 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0000853 R-ASA-1123757-2 AVESA.00001b.r3.1Ag0000853 [cytosol] R-ASA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119496 Pantothenate biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0000853 R-ASA-1123757-2 AVESA.00001b.r3.1Ag0000853 [cytosol] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0000853 R-ASA-1123757-2 AVESA.00001b.r3.1Ag0000853 [cytosol] R-ASA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119544 Pantothenate biosynthesis II none Avena sativa AVESA.00001b.r3.1Ag0000857 R-ASA-1130416-3 AVESA.00001b.r3.1Ag0000857 [mitochondrial matrix] R-ASA-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119337 Proline degradation none Avena sativa AVESA.00001b.r3.1Ag0000857 R-ASA-1130416-3 AVESA.00001b.r3.1Ag0000857 [mitochondrial matrix] R-ASA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119495 Citrulline biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0000864 R-ASA-1128054-2 AVESA.00001b.r3.1Ag0000864 [mitochondrial matrix] R-ASA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119479 Valine degradation none Avena sativa AVESA.00001b.r3.1Ag0000865 R-ASA-1125569-2 AVESA.00001b.r3.1Ag0000865 [cytosol] R-ASA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119516 Trehalose biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0000935 R-ASA-8933728-3 AVESA.00001b.r3.1Ag0000935 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.1Ag0000959 R-ASA-5632319-2 phospho-AVESA.00001b.r3.1Ag0000959 [plasma membrane] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.1Ag0000985 R-ASA-6787119-3 AVESA.00001b.r3.1Ag0000985 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.1Ag0001003 R-ASA-1124190-3 AVESA.00001b.r3.1Ag0001003 [plastid stroma] R-ASA-1119412 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119412 Chlorophyll a biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0001044 R-ASA-1127398-2 AVESA.00001b.r3.1Ag0001044 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0001044 R-ASA-1127398-2 AVESA.00001b.r3.1Ag0001044 [plasma membrane] R-ASA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639861 Development of root hair none Avena sativa AVESA.00001b.r3.1Ag0001049 R-ASA-1127989-3 AVESA.00001b.r3.1Ag0001049 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0001051 R-ASA-1122783-2 AVESA.00001b.r3.1Ag0001051 [chloroplast stroma] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0001058 R-ASA-9638999-2 AVESA.00001b.r3.1Ag0001058 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.1Ag0001115 R-ASA-1127916-2 AVESA.00001b.r3.1Ag0001115 [plastid stroma] R-ASA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119367 Polyisoprenoid biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0001115 R-ASA-1127916-2 AVESA.00001b.r3.1Ag0001115 [plastid stroma] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.1Ag0001147 R-ASA-4723654-3 AVESA.00001b.r3.1Ag0001147 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.1Ag0001147 R-ASA-1130030-3 AVESA.00001b.r3.1Ag0001147 [cytosol] R-ASA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119594 Pyridoxal 5'-phosphate biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0001147 R-ASA-1130030-3 AVESA.00001b.r3.1Ag0001147 [cytosol] R-ASA-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119629 Thiamine biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0001153 R-ASA-5679398-2 AVESA.00001b.r3.1Ag0001153 [cytosol] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.1Ag0001182 R-ASA-1123337-3 AVESA.00001b.r3.1Ag0001182 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0001209 R-ASA-9918267-3 ISA2 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0001212 R-ASA-5138489 AVESA.00001b.r3.1Ag0001212 [plastid stroma] R-ASA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119263 Arginine biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0001212 R-ASA-1127893 AVESA.00001b.r3.1Ag0001212 [cytosol] R-ASA-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119444 Canavanine biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0001212 R-ASA-5138489 AVESA.00001b.r3.1Ag0001212 [plastid stroma] R-ASA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119622 Arginine biosynthesis II (acetyl cycle) none Avena sativa AVESA.00001b.r3.1Ag0001212 R-ASA-5138489 AVESA.00001b.r3.1Ag0001212 [plastid stroma] R-ASA-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5633340 Citrulline-nitric oxide cycle none Avena sativa AVESA.00001b.r3.1Ag0001218 R-ASA-9640664-3 AVESA.00001b.r3.1Ag0001218 [nucleoplasm] R-ASA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640760 G1 phase none Avena sativa AVESA.00001b.r3.1Ag0001241 R-ASA-9675464 AVESA.00001b.r3.1Ag0001241 [nucleoplasm] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.1Ag0001331 R-ASA-1128131-2 AVESA.00001b.r3.1Ag0001331 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0001392 R-ASA-9924543-3 CYP714D1/EUI1 [endoplasmic reticulum membrane] R-ASA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Avena sativa AVESA.00001b.r3.1Ag0001413 R-ASA-9640767-3 AVESA.00001b.r3.1Ag0001413 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.1Ag0001413 R-ASA-9640767-3 AVESA.00001b.r3.1Ag0001413 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.1Ag0001413 R-ASA-9640767-3 AVESA.00001b.r3.1Ag0001413 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.1Ag0001418 R-ASA-1129539-3 AVESA.00001b.r3.1Ag0001418 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.1Ag0001421 R-ASA-9826697 AVESA.00001b.r3.1Ag0001421 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.1Ag0001512 R-ASA-1127913 AVESA.00001b.r3.1Ag0001512 [cytosol] R-ASA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119495 Citrulline biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0001512 R-ASA-1127913 AVESA.00001b.r3.1Ag0001512 [cytosol] R-ASA-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119631 Proline biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0001529 R-ASA-6787071 AVESA.00001b.r3.1Ag0001529 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.1Ag0001548 R-ASA-6788154-2 AVESA.00001b.r3.1Ag0001548 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.1Ag0001581 R-ASA-5654756-4 AVESA.00001b.r3.1Ag0001581 [cytosol] R-ASA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119281 Aspartate biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0001581 R-ASA-1123648-4 AVESA.00001b.r3.1Ag0001581 [plastid] R-ASA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119506 tyrosine degradation I none Avena sativa AVESA.00001b.r3.1Ag0001581 R-ASA-5631992-4 AVESA.00001b.r3.1Ag0001581 [plastid stroma] R-ASA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119553 Asparagine biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0001608 R-ASA-1126996 AVESA.00001b.r3.1Ag0001608 [cytosol] R-ASA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119316 Phenylpropanoid biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0001611 R-ASA-9681928-2 AVESA.00001b.r3.1Ag0001611 [Golgi membrane] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.1Ag0001624 R-ASA-9930304-2 ACA7 [plasma membrane] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.1Ag0001642 R-ASA-1127414-2 AVESA.00001b.r3.1Ag0001642 [cytosol] R-ASA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119265 Tetrahydrofolate biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0001687 R-ASA-1128973 AVESA.00001b.r3.1Ag0001687 [cytosol] R-ASA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0001687 R-ASA-1128973 AVESA.00001b.r3.1Ag0001687 [cytosol] R-ASA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119438 Secologanin and strictosidine biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0001687 R-ASA-1128973 AVESA.00001b.r3.1Ag0001687 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0001719 R-ASA-9826682 AVESA.00001b.r3.1Ag0001719 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.1Ag0001729 R-ASA-5608130-2 AVESA.00001b.r3.1Ag0001729 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.1Ag0001745 R-ASA-1123733-3 AVESA.00001b.r3.1Ag0001745 [cytosol] R-ASA-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119484 Folate polyglutamylation II none Avena sativa AVESA.00001b.r3.1Ag0001750 R-ASA-1126560-2 AVESA.00001b.r3.1Ag0001750 [cytosol] R-ASA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119516 Trehalose biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0001775 R-ASA-1125997-3 AVESA.00001b.r3.1Ag0001775 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.1Ag0001801 R-ASA-9607071 AVESA.00001b.r3.1Ag0001801 [mitochondrion] R-ASA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9607185 Generation of superoxide radicals none Avena sativa AVESA.00001b.r3.1Ag0001835 R-ASA-1129175 AVESA.00001b.r3.1Ag0001835 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0001862 R-ASA-1124037-3 AVESA.00001b.r3.1Ag0001862 [mitochondrial matrix] R-ASA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119289 Arginine degradation none Avena sativa AVESA.00001b.r3.1Ag0001870 R-ASA-4415101-2 AVESA.00001b.r3.1Ag0001870 [cytosol] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.1Ag0001894 R-ASA-8879034 HVA1 homolog [vacuolar lumen] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.1Ag0001897 R-ASA-8879034-3 HVA1 homolog [vacuolar lumen] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.1Ag0001927 R-ASA-8854127 AVESA.00001b.r3.1Ag0001927 [cytosol] R-ASA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119556 Choline biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0001935 R-ASA-1123935-3 AVESA.00001b.r3.1Ag0001935 [cytosol] R-ASA-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119262 Threonine biosynthesis from homoserine none Avena sativa AVESA.00001b.r3.1Ag0001955 R-ASA-9826667 AVESA.00001b.r3.1Ag0001955 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.1Ag0001961 R-ASA-9025372 AVESA.00001b.r3.1Ag0001961 [endoplasmic reticulum membrane] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0001967 R-ASA-9675820 AVESA.00001b.r3.1Ag0001967 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.1Ag0001987 R-ASA-6786999-2 AVESA.00001b.r3.1Ag0001987 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.1Ag0001989 R-ASA-1128214 AVESA.00001b.r3.1Ag0001989 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.1Ag0001991 R-ASA-5654957-2 AVESA.00001b.r3.1Ag0001991 [Golgi lumen] R-ASA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654909 Xylan biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0001999 R-ASA-1129926 AVESA.00001b.r3.1Ag0001999 [cytosol] R-ASA-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Avena sativa AVESA.00001b.r3.1Ag0002005 R-ASA-5608184-2 AVESA.00001b.r3.1Ag0002005 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.1Ag0002087 R-ASA-8933788-2 AVESA.00001b.r3.1Ag0002087 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.1Ag0002102 R-ASA-1126157-3 AVESA.00001b.r3.1Ag0002102 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.1Ag0002102 R-ASA-1126157-3 AVESA.00001b.r3.1Ag0002102 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0002107 R-ASA-1128961-2 AVESA.00001b.r3.1Ag0002107 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.1Ag0002119 R-ASA-1127922-2 AVESA.00001b.r3.1Ag0002119 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0002137 R-ASA-1127562-2 AVESA.00001b.r3.1Ag0002137 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0002147 R-ASA-1123482-3 AVESA.00001b.r3.1Ag0002147 [plastid stroma] R-ASA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119367 Polyisoprenoid biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0002159 R-ASA-6787184-5 AVESA.00001b.r3.1Ag0002159 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.1Ag0002160 R-ASA-1124861-2 AVESA.00001b.r3.1Ag0002160 [plastid stroma] R-ASA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119449 Carotenoid biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0002162 R-ASA-6787184-3 AVESA.00001b.r3.1Ag0002162 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.1Ag0002224 R-ASA-3899348-2 AVESA.00001b.r3.1Ag0002224 [cytosol] R-ASA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639861 Development of root hair none Avena sativa AVESA.00001b.r3.1Ag0002242 R-ASA-1124404-3 AVESA.00001b.r3.1Ag0002242 [cytosol] R-ASA-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119322 Leucodelphinidin biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0002242 R-ASA-1124404-3 AVESA.00001b.r3.1Ag0002242 [cytosol] R-ASA-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0002251 R-ASA-8933860-3 AVESA.00001b.r3.1Ag0002251 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.1Ag0002251 R-ASA-8933860-3 AVESA.00001b.r3.1Ag0002251 [nucleoplasm] R-ASA-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928946 Drought escape (DE) via ABA-independent pathway none Avena sativa AVESA.00001b.r3.1Ag0002253 R-ASA-1123046-3 AVESA.00001b.r3.1Ag0002253 [cytosol] R-ASA-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119386 UDP-N-acetylgalactosamine biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0002290 R-ASA-6787224-3 AVESA.00001b.r3.1Ag0002290 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.1Ag0002290 R-ASA-6787146-3 AVESA.00001b.r3.1Ag0002290 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.1Ag0002310 R-ASA-1122881-3 AVESA.00001b.r3.1Ag0002310 [cytosol] R-ASA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0002310 R-ASA-1122881-3 AVESA.00001b.r3.1Ag0002310 [cytosol] R-ASA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119438 Secologanin and strictosidine biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0002310 R-ASA-1122881-3 AVESA.00001b.r3.1Ag0002310 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0002321 R-ASA-1130281 AVESA.00001b.r3.1Ag0002321 [cytosol] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.1Ag0002363 R-ASA-1130231-2 AVESA.00001b.r3.1Ag0002363 [endoplasmic reticulum membrane] R-ASA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119325 Sphingolipid metabolism none Avena sativa AVESA.00001b.r3.1Ag0002412 R-ASA-1122347 AVESA.00001b.r3.1Ag0002412 [cytosol] R-ASA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119384 NAD biosynthesis I (from aspartate) none Avena sativa AVESA.00001b.r3.1Ag0002426 R-ASA-9645891-3 AVESA.00001b.r3.1Ag0002426 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.1Ag0002433 R-ASA-9918273-2 AVESA.00001b.r3.1Ag0002433 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0002433 R-ASA-9626376-2 AVESA.00001b.r3.1Ag0002433 [plastid stroma] R-ASA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9626305 Regulatory network of nutrient accumulation none Avena sativa AVESA.00001b.r3.1Ag0002435 R-ASA-1130162 AVESA.00001b.r3.1Ag0002435 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0002462 R-ASA-1124520-3 AVESA.00001b.r3.1Ag0002462 [cytosol] R-ASA-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119278 PRPP biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0002484 R-ASA-1124939-3 AVESA.00001b.r3.1Ag0002484 [cytosol] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0002500 R-ASA-9640697 phospho-AVESA.00001b.r3.1Ag0002500 [nucleoplasm] R-ASA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640760 G1 phase none Avena sativa AVESA.00001b.r3.1Ag0002500 R-ASA-9640660 AVESA.00001b.r3.1Ag0002500 [nucleoplasm] R-ASA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640760 G1 phase none Avena sativa AVESA.00001b.r3.1Ag0002500 R-ASA-9640697 phospho-AVESA.00001b.r3.1Ag0002500 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.1Ag0002541 R-ASA-3240748-3 AVESA.00001b.r3.1Ag0002541 [cytosol] R-ASA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Avena sativa AVESA.00001b.r3.1Ag0002548 R-ASA-8854445-3 AVESA.00001b.r3.1Ag0002548 [cytosol] R-ASA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119276 Choline biosynthesis III none Avena sativa AVESA.00001b.r3.1Ag0002649 R-ASA-1128322-2 AVESA.00001b.r3.1Ag0002649 [cytosol] R-ASA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119384 NAD biosynthesis I (from aspartate) none Avena sativa AVESA.00001b.r3.1Ag0002677 R-ASA-1126373-3 AVESA.00001b.r3.1Ag0002677 [cytosol] R-ASA-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0002693 R-ASA-1123337-2 AVESA.00001b.r3.1Ag0002693 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0002725 R-ASA-9918267-2 ISA2 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0002729 R-ASA-5138489-3 AVESA.00001b.r3.1Ag0002729 [plastid stroma] R-ASA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119263 Arginine biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0002729 R-ASA-1127893-3 AVESA.00001b.r3.1Ag0002729 [cytosol] R-ASA-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119444 Canavanine biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0002729 R-ASA-5138489-3 AVESA.00001b.r3.1Ag0002729 [plastid stroma] R-ASA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119622 Arginine biosynthesis II (acetyl cycle) none Avena sativa AVESA.00001b.r3.1Ag0002729 R-ASA-5138489-3 AVESA.00001b.r3.1Ag0002729 [plastid stroma] R-ASA-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5633340 Citrulline-nitric oxide cycle none Avena sativa AVESA.00001b.r3.1Ag0002733 R-ASA-9640664-2 AVESA.00001b.r3.1Ag0002733 [nucleoplasm] R-ASA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640760 G1 phase none Avena sativa AVESA.00001b.r3.1Ag0002757 R-ASA-9675464-3 AVESA.00001b.r3.1Ag0002757 [nucleoplasm] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.1Ag0002904 R-ASA-9924543-2 CYP714D1/EUI1 [endoplasmic reticulum membrane] R-ASA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Avena sativa AVESA.00001b.r3.1Ag0002934 R-ASA-9640767-2 AVESA.00001b.r3.1Ag0002934 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.1Ag0002934 R-ASA-9640767-2 AVESA.00001b.r3.1Ag0002934 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.1Ag0002934 R-ASA-9640767-2 AVESA.00001b.r3.1Ag0002934 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.1Ag0002938 R-ASA-1129539 AVESA.00001b.r3.1Ag0002938 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.1Ag0002941 R-ASA-9826697-2 AVESA.00001b.r3.1Ag0002941 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.1Ag0003006 R-ASA-1126172 AVESA.00001b.r3.1Ag0003006 [cytosol] R-ASA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119379 Flavin biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0003030 R-ASA-1127913-2 AVESA.00001b.r3.1Ag0003030 [cytosol] R-ASA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119495 Citrulline biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0003030 R-ASA-1127913-2 AVESA.00001b.r3.1Ag0003030 [cytosol] R-ASA-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119631 Proline biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0003036 R-ASA-9675849 AVESA.00001b.r3.1Ag0003036 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.1Ag0003051 R-ASA-6787071-2 AVESA.00001b.r3.1Ag0003051 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.1Ag0003106 R-ASA-5654756 AVESA.00001b.r3.1Ag0003106 [cytosol] R-ASA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119281 Aspartate biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0003106 R-ASA-1123648 AVESA.00001b.r3.1Ag0003106 [plastid] R-ASA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119506 tyrosine degradation I none Avena sativa AVESA.00001b.r3.1Ag0003106 R-ASA-5631992 AVESA.00001b.r3.1Ag0003106 [plastid stroma] R-ASA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119553 Asparagine biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0003131 R-ASA-1126996-2 AVESA.00001b.r3.1Ag0003131 [cytosol] R-ASA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119316 Phenylpropanoid biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0003132 R-ASA-9916302 AVESA.00001b.r3.1Ag0003132 [nucleoplasm] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.1Ag0003133 R-ASA-9681928-3 AVESA.00001b.r3.1Ag0003133 [Golgi membrane] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.1Ag0003145 R-ASA-9930304 ACA7 [plasma membrane] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.1Ag0003159 R-ASA-9916179-2 OsC3H36 [nucleoplasm] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.1Ag0003224 R-ASA-1128973-2 AVESA.00001b.r3.1Ag0003224 [cytosol] R-ASA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0003224 R-ASA-1128973-2 AVESA.00001b.r3.1Ag0003224 [cytosol] R-ASA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119438 Secologanin and strictosidine biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0003224 R-ASA-1128973-2 AVESA.00001b.r3.1Ag0003224 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0003249 R-ASA-9826682-2 AVESA.00001b.r3.1Ag0003249 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.1Ag0003259 R-ASA-5608130 AVESA.00001b.r3.1Ag0003259 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.1Ag0003271 R-ASA-1123733-2 AVESA.00001b.r3.1Ag0003271 [cytosol] R-ASA-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119484 Folate polyglutamylation II none Avena sativa AVESA.00001b.r3.1Ag0003275 R-ASA-1126560 AVESA.00001b.r3.1Ag0003275 [cytosol] R-ASA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119516 Trehalose biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0003302 R-ASA-1125997-2 AVESA.00001b.r3.1Ag0003302 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.1Ag0003323 R-ASA-9607071-3 AVESA.00001b.r3.1Ag0003323 [mitochondrion] R-ASA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9607185 Generation of superoxide radicals none Avena sativa AVESA.00001b.r3.1Ag0003351 R-ASA-1122560 AVESA.00001b.r3.1Ag0003351 [cytosol] R-ASA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119331 Cysteine biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0003352 R-ASA-1129175-3 AVESA.00001b.r3.1Ag0003352 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0003370 R-ASA-8854108 AVESA.00001b.r3.1Ag0003370 [cytosol] R-ASA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119556 Choline biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0003378 R-ASA-1124037 AVESA.00001b.r3.1Ag0003378 [mitochondrial matrix] R-ASA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119289 Arginine degradation none Avena sativa AVESA.00001b.r3.1Ag0003384 R-ASA-4415101 AVESA.00001b.r3.1Ag0003384 [cytosol] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.1Ag0003398 R-ASA-9675857 AVESA.00001b.r3.1Ag0003398 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.1Ag0003436 R-ASA-8854127-3 AVESA.00001b.r3.1Ag0003436 [cytosol] R-ASA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119556 Choline biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0003443 R-ASA-1123935 AVESA.00001b.r3.1Ag0003443 [cytosol] R-ASA-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119262 Threonine biosynthesis from homoserine none Avena sativa AVESA.00001b.r3.1Ag0003468 R-ASA-9826667-2 AVESA.00001b.r3.1Ag0003468 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.1Ag0003473 R-ASA-9025372-3 AVESA.00001b.r3.1Ag0003473 [endoplasmic reticulum membrane] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.1Ag0003480 R-ASA-9675820-2 AVESA.00001b.r3.1Ag0003480 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.1Ag0003505 R-ASA-6786999 AVESA.00001b.r3.1Ag0003505 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.1Ag0003507 R-ASA-1128214-2 AVESA.00001b.r3.1Ag0003507 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.1Ag0003508 R-ASA-5654957 AVESA.00001b.r3.1Ag0003508 [Golgi lumen] R-ASA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654909 Xylan biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0003515 R-ASA-1129926-3 AVESA.00001b.r3.1Ag0003515 [cytosol] R-ASA-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Avena sativa AVESA.00001b.r3.1Ag0003523 R-ASA-5608184-3 AVESA.00001b.r3.1Ag0003523 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.1Ag0003596 R-ASA-8933788 AVESA.00001b.r3.1Ag0003596 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.1Ag0003603 R-ASA-1126157-2 AVESA.00001b.r3.1Ag0003603 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.1Ag0003603 R-ASA-1126157-2 AVESA.00001b.r3.1Ag0003603 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0003609 R-ASA-1128961 AVESA.00001b.r3.1Ag0003609 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.1Ag0003624 R-ASA-1127922-3 AVESA.00001b.r3.1Ag0003624 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0003640 R-ASA-1127562-3 AVESA.00001b.r3.1Ag0003640 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0003649 R-ASA-1123482 AVESA.00001b.r3.1Ag0003649 [plastid stroma] R-ASA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119367 Polyisoprenoid biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0003668 R-ASA-6787184 AVESA.00001b.r3.1Ag0003668 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.1Ag0003670 R-ASA-6787184-4 AVESA.00001b.r3.1Ag0003670 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.1Ag0003713 R-ASA-9611477-5 phospho-phosphorylated-RLCK176 [cytosol] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.1Ag0003714 R-ASA-9611477-6 phospho-phosphorylated-RLCK176 [cytosol] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.1Ag0003726 R-ASA-3899348 AVESA.00001b.r3.1Ag0003726 [cytosol] R-ASA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639861 Development of root hair none Avena sativa AVESA.00001b.r3.1Ag0003737 R-ASA-1124404 AVESA.00001b.r3.1Ag0003737 [cytosol] R-ASA-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119322 Leucodelphinidin biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0003737 R-ASA-1124404 AVESA.00001b.r3.1Ag0003737 [cytosol] R-ASA-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Avena sativa AVESA.00001b.r3.1Ag0003743 R-ASA-8933860 AVESA.00001b.r3.1Ag0003743 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.1Ag0003743 R-ASA-8933860 AVESA.00001b.r3.1Ag0003743 [nucleoplasm] R-ASA-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928946 Drought escape (DE) via ABA-independent pathway none Avena sativa AVESA.00001b.r3.1Ag0003744 R-ASA-1123046-2 AVESA.00001b.r3.1Ag0003744 [cytosol] R-ASA-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119386 UDP-N-acetylgalactosamine biosynthesis none Avena sativa AVESA.00001b.r3.1Cg0000062 R-ASA-9930201-3 DREB2A [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.1Cg0000063 R-ASA-6788042-3 AVESA.00001b.r3.1Cg0000063 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.1Cg0000082 R-ASA-9826661-3 AVESA.00001b.r3.1Cg0000082 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.1Cg0000137 R-ASA-1126916-3 AVESA.00001b.r3.1Cg0000137 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.1Cg0000146 R-ASA-1125340-3 AVESA.00001b.r3.1Cg0000146 [plastid stroma] R-ASA-1119274 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119274 Monoterpene biosynthesis none Avena sativa AVESA.00001b.r3.1Cg0000146 R-ASA-1125340-3 AVESA.00001b.r3.1Cg0000146 [plastid stroma] R-ASA-1119593 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119593 Oleoresin monoterpene volatiles biosynthesis none Avena sativa AVESA.00001b.r3.1Cg0000147 R-ASA-1122545-3 AVESA.00001b.r3.1Cg0000147 [cytosol] R-ASA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119331 Cysteine biosynthesis I none Avena sativa AVESA.00001b.r3.1Cg0000173 R-ASA-1123561 AVESA.00001b.r3.1Cg0000173 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.1Cg0000191 R-ASA-1124270-2 AVESA.00001b.r3.1Cg0000191 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.1Cg0000194 R-ASA-1129781-4 AVESA.00001b.r3.1Cg0000194 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.1Cg0000210 R-ASA-1125612-6 AVESA.00001b.r3.1Cg0000210 [cytosol] R-ASA-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119353 Linear furanocoumarin biosynthesis none Avena sativa AVESA.00001b.r3.1Cg0000290 R-ASA-5149676-3 AVESA.00001b.r3.1Cg0000290 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.1Cg0000323 R-ASA-1125877-2 AVESA.00001b.r3.1Cg0000323 [cytosol] R-ASA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119456 Brassinosteroid biosynthesis II none Avena sativa AVESA.00001b.r3.1Cg0000380 R-ASA-9916305-3 AVESA.00001b.r3.1Cg0000380 [nucleoplasm] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.1Cg0000391 R-ASA-9826681-3 EREBP129 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.1Cg0000406 R-ASA-1127076 AVESA.00001b.r3.1Cg0000406 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.1Cg0000406 R-ASA-1127076 AVESA.00001b.r3.1Cg0000406 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.1Cg0000469 R-ASA-9609569-2 AVESA.00001b.r3.1Cg0000469 [cytosol] R-ASA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609573 Tricin biosynthesis none Avena sativa AVESA.00001b.r3.1Cg0000523 R-ASA-1128244-3 AVESA.00001b.r3.1Cg0000523 [chloroplast] R-ASA-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119348 Ent-kaurene biosynthesis none Avena sativa AVESA.00001b.r3.1Cg0000567 R-ASA-1126307-3 AVESA.00001b.r3.1Cg0000567 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.1Cg0000584 R-ASA-9675439-2 AVESA.00001b.r3.1Cg0000584 [mitochondrial matrix] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.1Cg0000638 R-ASA-1126165 AVESA.00001b.r3.1Cg0000638 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.1Cg0000648 R-ASA-6787257 AVESA.00001b.r3.1Cg0000648 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.1Cg0000648 R-ASA-6787976 AVESA.00001b.r3.1Cg0000648 [cytosol] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.1Cg0000648 R-ASA-6787257 AVESA.00001b.r3.1Cg0000648 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.1Cg0000856 R-ASA-1128528 AVESA.00001b.r3.1Cg0000856 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.1Cg0000922 R-ASA-5632268-3 AVESA.00001b.r3.1Cg0000922 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.1Cg0000941 R-ASA-9640698-2 AVESA.00001b.r3.1Cg0000941 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.1Cg0001008 R-ASA-5683263 AVESA.00001b.r3.1Cg0001008 [cytosol] R-ASA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119586 Cyanate degradation none Avena sativa AVESA.00001b.r3.1Cg0001134 R-ASA-5608161-3 AVESA.00001b.r3.1Cg0001134 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.1Cg0001159 R-ASA-9828974 CKX3 [endoplasmic reticulum lumen] R-ASA-9828944 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9828944 Regulation of lemma joint development and leaf angle by cytokinin none Avena sativa AVESA.00001b.r3.1Cg0001197 R-ASA-9675845-2 AVESA.00001b.r3.1Cg0001197 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.1Cg0001229 R-ASA-1123250 AVESA.00001b.r3.1Cg0001229 [cytosol] R-ASA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119265 Tetrahydrofolate biosynthesis I none Avena sativa AVESA.00001b.r3.1Cg0001229 R-ASA-1123250 AVESA.00001b.r3.1Cg0001229 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.1Cg0001238 R-ASA-1128766-2 AVESA.00001b.r3.1Cg0001238 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.1Cg0001238 R-ASA-1128766-2 AVESA.00001b.r3.1Cg0001238 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.1Cg0001245 R-ASA-1123296 AVESA.00001b.r3.1Cg0001245 [chloroplast envelope] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.1Cg0001252 R-ASA-8879004 AVESA.00001b.r3.1Cg0001252 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.1Cg0001296 R-ASA-1125928-2 AVESA.00001b.r3.1Cg0001296 [cytosol] R-ASA-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119484 Folate polyglutamylation II none Avena sativa AVESA.00001b.r3.1Cg0001296 R-ASA-1125928-2 AVESA.00001b.r3.1Cg0001296 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.1Cg0001296 R-ASA-1125928-2 AVESA.00001b.r3.1Cg0001296 [cytosol] R-ASA-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119617 Folate polyglutamylation I none Avena sativa AVESA.00001b.r3.1Cg0001300 R-ASA-5146758-4 AVESA.00001b.r3.1Cg0001300 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.1Cg0001347 R-ASA-9618171-5 AVESA.00001b.r3.1Cg0001347 [plasma membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.1Cg0001352 R-ASA-9618171-2 AVESA.00001b.r3.1Cg0001352 [plasma membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.1Cg0001356 R-ASA-1128613-3 AVESA.00001b.r3.1Cg0001356 [cytosol] R-ASA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119316 Phenylpropanoid biosynthesis none Avena sativa AVESA.00001b.r3.1Cg0001397 R-ASA-3315084-2 AVESA.00001b.r3.1Cg0001397 [cytosol] R-ASA-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119342 Gamma-glutamyl cycle none Avena sativa AVESA.00001b.r3.1Cg0001399 R-ASA-1124788 AVESA.00001b.r3.1Cg0001399 [cytosol] R-ASA-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119601 Trehalose degradation II none Avena sativa AVESA.00001b.r3.1Cg0001410 R-ASA-8879001-2 AVESA.00001b.r3.1Cg0001410 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.1Cg0001421 R-ASA-1127490 AVESA.00001b.r3.1Cg0001421 [cytosol] R-ASA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119389 Phenylalanine biosynthesis I none Avena sativa AVESA.00001b.r3.1Cg0001438 R-ASA-6788007 AVESA.00001b.r3.1Cg0001438 [cytosol] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.1Cg0001477 R-ASA-1127087 AVESA.00001b.r3.1Cg0001477 [cytosol] R-ASA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119438 Secologanin and strictosidine biosynthesis none Avena sativa AVESA.00001b.r3.1Cg0001500 R-ASA-4754220-3 AVESA.00001b.r3.1Cg0001500 [plastid stroma] R-ASA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119449 Carotenoid biosynthesis none Avena sativa AVESA.00001b.r3.1Cg0001500 R-ASA-1126847-3 AVESA.00001b.r3.1Cg0001500 [cytosol] R-ASA-1119492 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119492 Lactucaxanthin biosynthesis none Avena sativa AVESA.00001b.r3.1Cg0001509 R-ASA-1122593 AVESA.00001b.r3.1Cg0001509 [cytosol] R-ASA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119436 Peptidoglycan biosynthesis I none Avena sativa AVESA.00001b.r3.1Cg0001509 R-ASA-1122593 AVESA.00001b.r3.1Cg0001509 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.1Cg0001509 R-ASA-1122593 AVESA.00001b.r3.1Cg0001509 [cytosol] R-ASA-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119617 Folate polyglutamylation I none Avena sativa AVESA.00001b.r3.1Cg0001514 R-ASA-1123757 AVESA.00001b.r3.1Cg0001514 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.1Cg0001514 R-ASA-1123757 AVESA.00001b.r3.1Cg0001514 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.1Cg0001514 R-ASA-1123757 AVESA.00001b.r3.1Cg0001514 [cytosol] R-ASA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119496 Pantothenate biosynthesis I none Avena sativa AVESA.00001b.r3.1Cg0001514 R-ASA-1123757 AVESA.00001b.r3.1Cg0001514 [cytosol] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.1Cg0001514 R-ASA-1123757 AVESA.00001b.r3.1Cg0001514 [cytosol] R-ASA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119544 Pantothenate biosynthesis II none Avena sativa AVESA.00001b.r3.1Cg0001518 R-ASA-1130416-2 AVESA.00001b.r3.1Cg0001518 [mitochondrial matrix] R-ASA-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119337 Proline degradation none Avena sativa AVESA.00001b.r3.1Cg0001518 R-ASA-1130416-2 AVESA.00001b.r3.1Cg0001518 [mitochondrial matrix] R-ASA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119495 Citrulline biosynthesis none Avena sativa AVESA.00001b.r3.1Cg0001527 R-ASA-1128054 AVESA.00001b.r3.1Cg0001527 [mitochondrial matrix] R-ASA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119479 Valine degradation none Avena sativa AVESA.00001b.r3.1Cg0001528 R-ASA-1125569 AVESA.00001b.r3.1Cg0001528 [cytosol] R-ASA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119516 Trehalose biosynthesis I none Avena sativa AVESA.00001b.r3.1Cg0001599 R-ASA-8933728 AVESA.00001b.r3.1Cg0001599 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.1Cg0001624 R-ASA-1124078 AVESA.00001b.r3.1Cg0001624 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.1Cg0001641 R-ASA-5632319 phospho-AVESA.00001b.r3.1Cg0001641 [plasma membrane] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.1Cg0001664 R-ASA-1126636-3 AVESA.00001b.r3.1Cg0001664 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.1Cg0001681 R-ASA-6787119 AVESA.00001b.r3.1Cg0001681 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.1Cg0001702 R-ASA-1124190-2 AVESA.00001b.r3.1Cg0001702 [plastid stroma] R-ASA-1119412 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119412 Chlorophyll a biosynthesis I none Avena sativa AVESA.00001b.r3.1Cg0001775 R-ASA-1127989-2 AVESA.00001b.r3.1Cg0001775 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.1Cg0001777 R-ASA-1122783 AVESA.00001b.r3.1Cg0001777 [chloroplast stroma] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.1Cg0001785 R-ASA-9638999 AVESA.00001b.r3.1Cg0001785 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.1Cg0001835 R-ASA-1127916-3 AVESA.00001b.r3.1Cg0001835 [plastid stroma] R-ASA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119367 Polyisoprenoid biosynthesis none Avena sativa AVESA.00001b.r3.1Cg0001835 R-ASA-1127916-3 AVESA.00001b.r3.1Cg0001835 [plastid stroma] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.1Cg0001863 R-ASA-4723654 AVESA.00001b.r3.1Cg0001863 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.1Cg0001863 R-ASA-1130030 AVESA.00001b.r3.1Cg0001863 [cytosol] R-ASA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119594 Pyridoxal 5'-phosphate biosynthesis none Avena sativa AVESA.00001b.r3.1Cg0001863 R-ASA-1130030 AVESA.00001b.r3.1Cg0001863 [cytosol] R-ASA-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119629 Thiamine biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0000001 R-ASA-1124404-2 AVESA.00001b.r3.1Dg0000001 [cytosol] R-ASA-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119322 Leucodelphinidin biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0000001 R-ASA-1124404-2 AVESA.00001b.r3.1Dg0000001 [cytosol] R-ASA-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0000050 R-ASA-1130088-2 AVESA.00001b.r3.1Dg0000050 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0000074 R-ASA-1128244-2 AVESA.00001b.r3.1Dg0000074 [chloroplast] R-ASA-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119348 Ent-kaurene biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0000089 R-ASA-1129569-2 AVESA.00001b.r3.1Dg0000089 [cytosol] R-ASA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119379 Flavin biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0000134 R-ASA-9675439-3 AVESA.00001b.r3.1Dg0000134 [mitochondrial matrix] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.1Dg0000175 R-ASA-1126165-2 AVESA.00001b.r3.1Dg0000175 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.1Dg0000184 R-ASA-9640786 AVESA.00001b.r3.1Dg0000184 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.1Dg0000184 R-ASA-9640786 AVESA.00001b.r3.1Dg0000184 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.1Dg0000184 R-ASA-9640786 AVESA.00001b.r3.1Dg0000184 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.1Dg0000198 R-ASA-6787257-2 AVESA.00001b.r3.1Dg0000198 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.1Dg0000198 R-ASA-6787976-2 AVESA.00001b.r3.1Dg0000198 [cytosol] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.1Dg0000198 R-ASA-6787257-2 AVESA.00001b.r3.1Dg0000198 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.1Dg0000216 R-ASA-1126892-2 AVESA.00001b.r3.1Dg0000216 [cytosol] R-ASA-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119353 Linear furanocoumarin biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0000283 R-ASA-9640698 AVESA.00001b.r3.1Dg0000283 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.1Dg0000336 R-ASA-9639029 AVESA.00001b.r3.1Dg0000336 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.1Dg0000377 R-ASA-1128528-3 AVESA.00001b.r3.1Dg0000377 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0000451 R-ASA-5632268 AVESA.00001b.r3.1Dg0000451 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.1Dg0000504 R-ASA-5608161-2 AVESA.00001b.r3.1Dg0000504 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.1Dg0000574 R-ASA-9675845 AVESA.00001b.r3.1Dg0000574 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.1Dg0000595 R-ASA-1123250-3 AVESA.00001b.r3.1Dg0000595 [cytosol] R-ASA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119265 Tetrahydrofolate biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0000595 R-ASA-1123250-3 AVESA.00001b.r3.1Dg0000595 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.1Dg0000600 R-ASA-1128766-3 AVESA.00001b.r3.1Dg0000600 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.1Dg0000600 R-ASA-1128766-3 AVESA.00001b.r3.1Dg0000600 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0000601 R-ASA-1126305 AVESA.00001b.r3.1Dg0000601 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0000605 R-ASA-1123296-2 AVESA.00001b.r3.1Dg0000605 [chloroplast envelope] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0000623 R-ASA-8879004-3 AVESA.00001b.r3.1Dg0000623 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.1Dg0000644 R-ASA-1125928-3 AVESA.00001b.r3.1Dg0000644 [cytosol] R-ASA-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119484 Folate polyglutamylation II none Avena sativa AVESA.00001b.r3.1Dg0000644 R-ASA-1125928-3 AVESA.00001b.r3.1Dg0000644 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.1Dg0000644 R-ASA-1125928-3 AVESA.00001b.r3.1Dg0000644 [cytosol] R-ASA-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119617 Folate polyglutamylation I none Avena sativa AVESA.00001b.r3.1Dg0000647 R-ASA-5146758-5 AVESA.00001b.r3.1Dg0000647 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.1Dg0000648 R-ASA-5146758-2 AVESA.00001b.r3.1Dg0000648 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.1Dg0000675 R-ASA-8987554-2 AVESA.00001b.r3.1Dg0000675 [mitochondrial matrix] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.1Dg0000682 R-ASA-9618171-6 AVESA.00001b.r3.1Dg0000682 [plasma membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.1Dg0000683 R-ASA-9618171-3 AVESA.00001b.r3.1Dg0000683 [plasma membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.1Dg0000686 R-ASA-1128613 AVESA.00001b.r3.1Dg0000686 [cytosol] R-ASA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119316 Phenylpropanoid biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0000736 R-ASA-3315084 AVESA.00001b.r3.1Dg0000736 [cytosol] R-ASA-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119342 Gamma-glutamyl cycle none Avena sativa AVESA.00001b.r3.1Dg0000738 R-ASA-1124788-2 AVESA.00001b.r3.1Dg0000738 [cytosol] R-ASA-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119601 Trehalose degradation II none Avena sativa AVESA.00001b.r3.1Dg0000749 R-ASA-8879001 AVESA.00001b.r3.1Dg0000749 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.1Dg0000759 R-ASA-1127490-2 AVESA.00001b.r3.1Dg0000759 [cytosol] R-ASA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119389 Phenylalanine biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0000775 R-ASA-6788007-3 AVESA.00001b.r3.1Dg0000775 [cytosol] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.1Dg0000806 R-ASA-1127087-2 AVESA.00001b.r3.1Dg0000806 [cytosol] R-ASA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119438 Secologanin and strictosidine biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0000812 R-ASA-2885386-3 AVESA.00001b.r3.1Dg0000812 [cytosol] R-ASA-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119417 Stachyose biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0000825 R-ASA-4754220 AVESA.00001b.r3.1Dg0000825 [plastid stroma] R-ASA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119449 Carotenoid biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0000825 R-ASA-1126847 AVESA.00001b.r3.1Dg0000825 [cytosol] R-ASA-1119492 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119492 Lactucaxanthin biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0000832 R-ASA-1122593-2 AVESA.00001b.r3.1Dg0000832 [cytosol] R-ASA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119436 Peptidoglycan biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0000832 R-ASA-1122593-2 AVESA.00001b.r3.1Dg0000832 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.1Dg0000832 R-ASA-1122593-2 AVESA.00001b.r3.1Dg0000832 [cytosol] R-ASA-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119617 Folate polyglutamylation I none Avena sativa AVESA.00001b.r3.1Dg0000834 R-ASA-1123757-3 AVESA.00001b.r3.1Dg0000834 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.1Dg0000834 R-ASA-1123757-3 AVESA.00001b.r3.1Dg0000834 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0000834 R-ASA-1123757-3 AVESA.00001b.r3.1Dg0000834 [cytosol] R-ASA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119496 Pantothenate biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0000834 R-ASA-1123757-3 AVESA.00001b.r3.1Dg0000834 [cytosol] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0000834 R-ASA-1123757-3 AVESA.00001b.r3.1Dg0000834 [cytosol] R-ASA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119544 Pantothenate biosynthesis II none Avena sativa AVESA.00001b.r3.1Dg0000841 R-ASA-1130416 AVESA.00001b.r3.1Dg0000841 [mitochondrial matrix] R-ASA-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119337 Proline degradation none Avena sativa AVESA.00001b.r3.1Dg0000841 R-ASA-1130416 AVESA.00001b.r3.1Dg0000841 [mitochondrial matrix] R-ASA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119495 Citrulline biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0000849 R-ASA-1128054-3 AVESA.00001b.r3.1Dg0000849 [mitochondrial matrix] R-ASA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119479 Valine degradation none Avena sativa AVESA.00001b.r3.1Dg0000850 R-ASA-1125569-3 AVESA.00001b.r3.1Dg0000850 [cytosol] R-ASA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119516 Trehalose biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0000923 R-ASA-8933728-2 AVESA.00001b.r3.1Dg0000923 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.1Dg0000948 R-ASA-5632319-3 phospho-AVESA.00001b.r3.1Dg0000948 [plasma membrane] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.1Dg0000974 R-ASA-6787119-2 AVESA.00001b.r3.1Dg0000974 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.1Dg0000995 R-ASA-1124190 AVESA.00001b.r3.1Dg0000995 [plastid stroma] R-ASA-1119412 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119412 Chlorophyll a biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0001037 R-ASA-1127398 AVESA.00001b.r3.1Dg0001037 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0001037 R-ASA-1127398 AVESA.00001b.r3.1Dg0001037 [plasma membrane] R-ASA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639861 Development of root hair none Avena sativa AVESA.00001b.r3.1Dg0001042 R-ASA-1127989 AVESA.00001b.r3.1Dg0001042 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0001045 R-ASA-1122783-3 AVESA.00001b.r3.1Dg0001045 [chloroplast stroma] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0001054 R-ASA-9638999-3 AVESA.00001b.r3.1Dg0001054 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.1Dg0001113 R-ASA-1127916 AVESA.00001b.r3.1Dg0001113 [plastid stroma] R-ASA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119367 Polyisoprenoid biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0001113 R-ASA-1127916 AVESA.00001b.r3.1Dg0001113 [plastid stroma] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.1Dg0001147 R-ASA-4723654-2 AVESA.00001b.r3.1Dg0001147 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.1Dg0001147 R-ASA-1130030-2 AVESA.00001b.r3.1Dg0001147 [cytosol] R-ASA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119594 Pyridoxal 5'-phosphate biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0001147 R-ASA-1130030-2 AVESA.00001b.r3.1Dg0001147 [cytosol] R-ASA-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119629 Thiamine biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0001151 R-ASA-5679398 AVESA.00001b.r3.1Dg0001151 [cytosol] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.1Dg0001183 R-ASA-1123337 AVESA.00001b.r3.1Dg0001183 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0001216 R-ASA-9918267 ISA2 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0001225 R-ASA-5138489-2 AVESA.00001b.r3.1Dg0001225 [plastid stroma] R-ASA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119263 Arginine biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0001225 R-ASA-1127893-2 AVESA.00001b.r3.1Dg0001225 [cytosol] R-ASA-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119444 Canavanine biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0001225 R-ASA-5138489-2 AVESA.00001b.r3.1Dg0001225 [plastid stroma] R-ASA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119622 Arginine biosynthesis II (acetyl cycle) none Avena sativa AVESA.00001b.r3.1Dg0001225 R-ASA-5138489-2 AVESA.00001b.r3.1Dg0001225 [plastid stroma] R-ASA-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5633340 Citrulline-nitric oxide cycle none Avena sativa AVESA.00001b.r3.1Dg0001232 R-ASA-9640664 AVESA.00001b.r3.1Dg0001232 [nucleoplasm] R-ASA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640760 G1 phase none Avena sativa AVESA.00001b.r3.1Dg0001255 R-ASA-9675464-2 AVESA.00001b.r3.1Dg0001255 [nucleoplasm] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.1Dg0001340 R-ASA-9826699 AVESA.00001b.r3.1Dg0001340 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.1Dg0001343 R-ASA-1128131 AVESA.00001b.r3.1Dg0001343 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0001407 R-ASA-9924543 CYP714D1/EUI1 [endoplasmic reticulum membrane] R-ASA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Avena sativa AVESA.00001b.r3.1Dg0001425 R-ASA-9640767 AVESA.00001b.r3.1Dg0001425 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.1Dg0001425 R-ASA-9640767 AVESA.00001b.r3.1Dg0001425 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.1Dg0001425 R-ASA-9640767 AVESA.00001b.r3.1Dg0001425 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.1Dg0001428 R-ASA-1129539-2 AVESA.00001b.r3.1Dg0001428 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.1Dg0001433 R-ASA-9826697-3 AVESA.00001b.r3.1Dg0001433 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.1Dg0001502 R-ASA-1126172-2 AVESA.00001b.r3.1Dg0001502 [cytosol] R-ASA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119379 Flavin biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0001529 R-ASA-1127913-3 AVESA.00001b.r3.1Dg0001529 [cytosol] R-ASA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119495 Citrulline biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0001529 R-ASA-1127913-3 AVESA.00001b.r3.1Dg0001529 [cytosol] R-ASA-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119631 Proline biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0001549 R-ASA-6787071-3 AVESA.00001b.r3.1Dg0001549 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.1Dg0001571 R-ASA-6788154 AVESA.00001b.r3.1Dg0001571 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.1Dg0001610 R-ASA-5654756-3 AVESA.00001b.r3.1Dg0001610 [cytosol] R-ASA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119281 Aspartate biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0001610 R-ASA-1123648-3 AVESA.00001b.r3.1Dg0001610 [plastid] R-ASA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119506 tyrosine degradation I none Avena sativa AVESA.00001b.r3.1Dg0001610 R-ASA-5631992-3 AVESA.00001b.r3.1Dg0001610 [plastid stroma] R-ASA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119553 Asparagine biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0001633 R-ASA-1126996-3 AVESA.00001b.r3.1Dg0001633 [cytosol] R-ASA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119316 Phenylpropanoid biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0001637 R-ASA-9681928 AVESA.00001b.r3.1Dg0001637 [Golgi membrane] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.1Dg0001645 R-ASA-9930304-3 ACA7 [plasma membrane] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.1Dg0001665 R-ASA-9916179 OsC3H36 [nucleoplasm] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.1Dg0001679 R-ASA-1127414-3 AVESA.00001b.r3.1Dg0001679 [cytosol] R-ASA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119265 Tetrahydrofolate biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0001753 R-ASA-9826682-3 AVESA.00001b.r3.1Dg0001753 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.1Dg0001777 R-ASA-1123733 AVESA.00001b.r3.1Dg0001777 [cytosol] R-ASA-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119484 Folate polyglutamylation II none Avena sativa AVESA.00001b.r3.1Dg0001782 R-ASA-1126560-3 AVESA.00001b.r3.1Dg0001782 [cytosol] R-ASA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119516 Trehalose biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0001804 R-ASA-1125997 AVESA.00001b.r3.1Dg0001804 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.1Dg0001826 R-ASA-9607071-2 AVESA.00001b.r3.1Dg0001826 [mitochondrion] R-ASA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9607185 Generation of superoxide radicals none Avena sativa AVESA.00001b.r3.1Dg0001853 R-ASA-1122560-2 AVESA.00001b.r3.1Dg0001853 [cytosol] R-ASA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119331 Cysteine biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0001854 R-ASA-1129175-2 AVESA.00001b.r3.1Dg0001854 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0001868 R-ASA-8854108-2 AVESA.00001b.r3.1Dg0001868 [cytosol] R-ASA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119556 Choline biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0001877 R-ASA-1124037-2 AVESA.00001b.r3.1Dg0001877 [mitochondrial matrix] R-ASA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119289 Arginine degradation none Avena sativa AVESA.00001b.r3.1Dg0001884 R-ASA-4415101-3 AVESA.00001b.r3.1Dg0001884 [cytosol] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.1Dg0001900 R-ASA-9675857-2 AVESA.00001b.r3.1Dg0001900 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.1Dg0001915 R-ASA-8879034-2 HVA1 homolog [vacuolar lumen] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.1Dg0001949 R-ASA-8854127-2 AVESA.00001b.r3.1Dg0001949 [cytosol] R-ASA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119556 Choline biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0001953 R-ASA-1123935-2 AVESA.00001b.r3.1Dg0001953 [cytosol] R-ASA-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119262 Threonine biosynthesis from homoserine none Avena sativa AVESA.00001b.r3.1Dg0001982 R-ASA-9025372-2 AVESA.00001b.r3.1Dg0001982 [endoplasmic reticulum membrane] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0002013 R-ASA-6786999-3 AVESA.00001b.r3.1Dg0002013 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.1Dg0002015 R-ASA-1128214-3 AVESA.00001b.r3.1Dg0002015 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.1Dg0002016 R-ASA-5654957-3 AVESA.00001b.r3.1Dg0002016 [Golgi lumen] R-ASA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654909 Xylan biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0002026 R-ASA-1129926-2 AVESA.00001b.r3.1Dg0002026 [cytosol] R-ASA-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Avena sativa AVESA.00001b.r3.1Dg0002033 R-ASA-5608184 AVESA.00001b.r3.1Dg0002033 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.1Dg0002102 R-ASA-8933788-3 AVESA.00001b.r3.1Dg0002102 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.1Dg0002116 R-ASA-1126157 AVESA.00001b.r3.1Dg0002116 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.1Dg0002116 R-ASA-1126157 AVESA.00001b.r3.1Dg0002116 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0002120 R-ASA-1128961-3 AVESA.00001b.r3.1Dg0002120 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.1Dg0002130 R-ASA-1127922 AVESA.00001b.r3.1Dg0002130 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0002148 R-ASA-1127562 AVESA.00001b.r3.1Dg0002148 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0002168 R-ASA-1123482-2 AVESA.00001b.r3.1Dg0002168 [plastid stroma] R-ASA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119367 Polyisoprenoid biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0002186 R-ASA-6787184-6 AVESA.00001b.r3.1Dg0002186 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.1Dg0002189 R-ASA-6787184-2 AVESA.00001b.r3.1Dg0002189 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.1Dg0002227 R-ASA-9611477-4 phospho-phosphorylated-RLCK176 [cytosol] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.1Dg0002282 R-ASA-1124742-3 AVESA.00001b.r3.1Dg0002282 [cytosol] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0002282 R-ASA-1124742-3 AVESA.00001b.r3.1Dg0002282 [cytosol] R-ASA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119570 Cytosolic glycolysis none Avena sativa AVESA.00001b.r3.1Dg0002315 R-ASA-9645809-7 AVESA.00001b.r3.1Dg0002315 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.1Dg0002315 R-ASA-9645809-7 AVESA.00001b.r3.1Dg0002315 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.1Dg0002315 R-ASA-9645809-7 AVESA.00001b.r3.1Dg0002315 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.1Dg0002316 R-ASA-9645809-8 AVESA.00001b.r3.1Dg0002316 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.1Dg0002316 R-ASA-9645809-8 AVESA.00001b.r3.1Dg0002316 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.1Dg0002316 R-ASA-9645809-8 AVESA.00001b.r3.1Dg0002316 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.1Dg0002323 R-ASA-9611477 phospho-phosphorylated-RLCK176 [cytosol] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.1Dg0002379 R-ASA-1126625-6 AVESA.00001b.r3.1Dg0002379 [cytosol] R-ASA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119334 Ethylene biosynthesis from methionine none Avena sativa AVESA.00001b.r3.1Dg0002379 R-ASA-1126625-6 AVESA.00001b.r3.1Dg0002379 [cytosol] R-ASA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119501 S-adenosyl-L-methionine cycle none Avena sativa AVESA.00001b.r3.1Dg0002379 R-ASA-1126625-6 AVESA.00001b.r3.1Dg0002379 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.1Dg0002379 R-ASA-9025797-6 AVESA.00001b.r3.1Dg0002379 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0002381 R-ASA-1123745 AVESA.00001b.r3.1Dg0002381 [endoplasmic reticulum membrane] R-ASA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119260 Cardiolipin biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0002381 R-ASA-1123745 AVESA.00001b.r3.1Dg0002381 [endoplasmic reticulum membrane] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0002393 R-ASA-1124935-5 AVESA.00001b.r3.1Dg0002393 [cytosol] R-ASA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119349 S-methylmethionine cycle none Avena sativa AVESA.00001b.r3.1Dg0002481 R-ASA-5654933-3 AVESA.00001b.r3.1Dg0002481 [Golgi lumen] R-ASA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654909 Xylan biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0002506 R-ASA-9611863-2 AVESA.00001b.r3.1Dg0002506 [mitochondrial matrix] R-ASA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119479 Valine degradation none Avena sativa AVESA.00001b.r3.1Dg0002527 R-ASA-1129184-3 AVESA.00001b.r3.1Dg0002527 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0002527 R-ASA-1129184-3 AVESA.00001b.r3.1Dg0002527 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.1Dg0002527 R-ASA-5606505-3 AVESA.00001b.r3.1Dg0002527 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.1Dg0002540 R-ASA-5138505 AVESA.00001b.r3.1Dg0002540 [plastid stroma] R-ASA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119263 Arginine biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0002540 R-ASA-5138505 AVESA.00001b.r3.1Dg0002540 [plastid stroma] R-ASA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119539 Ornithine biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0002540 R-ASA-5138505 AVESA.00001b.r3.1Dg0002540 [plastid stroma] R-ASA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119622 Arginine biosynthesis II (acetyl cycle) none Avena sativa AVESA.00001b.r3.1Dg0002542 R-ASA-9826705-2 OSH71 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.1Dg0002563 R-ASA-1124969-3 AVESA.00001b.r3.1Dg0002563 [cytosol] R-ASA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119265 Tetrahydrofolate biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0002563 R-ASA-1124969-3 AVESA.00001b.r3.1Dg0002563 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.1Dg0002599 R-ASA-9826643 AVESA.00001b.r3.1Dg0002599 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.1Dg0002628 R-ASA-5632341 AVESA.00001b.r3.1Dg0002628 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.1Dg0002628 R-ASA-5632170 phospho-AVESA.00001b.r3.1Dg0002628 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.1Dg0002687 R-ASA-5608164 AVESA.00001b.r3.1Dg0002687 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.1Dg0002687 R-ASA-5608164 AVESA.00001b.r3.1Dg0002687 [nucleoplasm] R-ASA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030557 Lateral root initiation none Avena sativa AVESA.00001b.r3.1Dg0002687 R-ASA-5608164 AVESA.00001b.r3.1Dg0002687 [nucleoplasm] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.1Dg0002687 R-ASA-9658967 AVESA.00001b.r3.1Dg0002687 [cytosol] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.1Dg0002776 R-ASA-4415078-2 AVESA.00001b.r3.1Dg0002776 [cytosol] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.1Dg0002789 R-ASA-1127082 AVESA.00001b.r3.1Dg0002789 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.1Dg0002805 R-ASA-6787198 AVESA.00001b.r3.1Dg0002805 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.1Dg0002815 R-ASA-1123998-3 AVESA.00001b.r3.1Dg0002815 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0002822 R-ASA-9626449 AVESA.00001b.r3.1Dg0002822 [cytosol] R-ASA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9626305 Regulatory network of nutrient accumulation none Avena sativa AVESA.00001b.r3.1Dg0002836 R-ASA-1125584-6 AVESA.00001b.r3.1Dg0002836 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0002856 R-ASA-1130456-2 AVESA.00001b.r3.1Dg0002856 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0002857 R-ASA-5632157-2 AVESA.00001b.r3.1Dg0002857 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.1Dg0002857 R-ASA-5632157-2 AVESA.00001b.r3.1Dg0002857 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.1Dg0002874 R-ASA-1126421 AVESA.00001b.r3.1Dg0002874 [cytosol] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0002874 R-ASA-1126421 AVESA.00001b.r3.1Dg0002874 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.1Dg0002894 R-ASA-1125870-3 AVESA.00001b.r3.1Dg0002894 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0002894 R-ASA-1125870-3 AVESA.00001b.r3.1Dg0002894 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.1Dg0002894 R-ASA-5606480-3 AVESA.00001b.r3.1Dg0002894 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.1Dg0002970 R-ASA-9639049-2 AVESA.00001b.r3.1Dg0002970 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.1Dg0002972 R-ASA-1122974 AVESA.00001b.r3.1Dg0002972 [mitochondrial matrix] R-ASA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119479 Valine degradation none Avena sativa AVESA.00001b.r3.1Dg0003002 R-ASA-1128804 AVESA.00001b.r3.1Dg0003002 [cytosol] R-ASA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119516 Trehalose biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0003009 R-ASA-1127192-3 AVESA.00001b.r3.1Dg0003009 [cytosol] R-ASA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119291 Nitrate assimilation none Avena sativa AVESA.00001b.r3.1Dg0003009 R-ASA-1127192-3 AVESA.00001b.r3.1Dg0003009 [cytosol] R-ASA-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119293 Glutamine biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0003009 R-ASA-1127192-3 AVESA.00001b.r3.1Dg0003009 [cytosol] R-ASA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119443 Ammonia assimilation cycle none Avena sativa AVESA.00001b.r3.1Dg0003021 R-ASA-1129111 AVESA.00001b.r3.1Dg0003021 [cytosol] R-ASA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119349 S-methylmethionine cycle none Avena sativa AVESA.00001b.r3.1Dg0003021 R-ASA-1129111 AVESA.00001b.r3.1Dg0003021 [cytosol] R-ASA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119400 Methionine biosynthesis II none Avena sativa AVESA.00001b.r3.1Dg0003044 R-ASA-9645944 AVESA.00001b.r3.1Dg0003044 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.1Dg0003093 R-ASA-9640716 AVESA.00001b.r3.1Dg0003093 [nucleoplasm] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.1Dg0003093 R-ASA-9640716 AVESA.00001b.r3.1Dg0003093 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.1Dg0003093 R-ASA-9640716 AVESA.00001b.r3.1Dg0003093 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.1Dg0003106 R-ASA-5654859-2 AVESA.00001b.r3.1Dg0003106 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.1Dg0003106 R-ASA-5654859-2 AVESA.00001b.r3.1Dg0003106 [nucleoplasm] R-ASA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Avena sativa AVESA.00001b.r3.1Dg0003129 R-ASA-9826620 HOX12/ OsGT1 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.1Dg0003129 R-ASA-9826620 HOX12/ OsGT1 [nucleoplasm] R-ASA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Avena sativa AVESA.00001b.r3.1Dg0003130 R-ASA-9826620-3 HOX12/ OsGT1 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.1Dg0003130 R-ASA-9826620-3 HOX12/ OsGT1 [nucleoplasm] R-ASA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Avena sativa AVESA.00001b.r3.1Dg0003150 R-ASA-5606521-3 AVESA.00001b.r3.1Dg0003150 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.1Dg0003156 R-ASA-9658681-2 AVESA.00001b.r3.1Dg0003156 [plasma membrane] R-ASA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119567 Beta-alanine biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0003159 R-ASA-1129964-3 AVESA.00001b.r3.1Dg0003159 [cytosol] R-ASA-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119378 Myo-inositol biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0003159 R-ASA-1129964-3 AVESA.00001b.r3.1Dg0003159 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.1Dg0003177 R-ASA-1122295 AVESA.00001b.r3.1Dg0003177 [cytosol] R-ASA-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119353 Linear furanocoumarin biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0003186 R-ASA-5608140-2 AVESA.00001b.r3.1Dg0003186 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.1Dg0003194 R-ASA-4827040 AVESA.00001b.r3.1Dg0003194 [plastid stroma] R-ASA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-4827054 Tetrapyrrole biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0003197 R-ASA-9640701 AVESA.00001b.r3.1Dg0003197 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.1Dg0003197 R-ASA-9640701 AVESA.00001b.r3.1Dg0003197 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.1Dg0003199 R-ASA-5654911 AVESA.00001b.r3.1Dg0003199 [Golgi lumen] R-ASA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654909 Xylan biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0003222 R-ASA-1123433 AVESA.00001b.r3.1Dg0003222 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0003222 R-ASA-1123433 AVESA.00001b.r3.1Dg0003222 [cytosol] R-ASA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119618 13-LOX and 13-HPL pathway none Avena sativa AVESA.00001b.r3.1Dg0003273 R-ASA-1122934-3 AVESA.00001b.r3.1Dg0003273 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.1Dg0003280 R-ASA-5632205-2 AVESA.00001b.r3.1Dg0003280 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.1Dg0003292 R-ASA-1127299-2 AVESA.00001b.r3.1Dg0003292 [cytosol] R-ASA-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119298 Glutathione redox reactions II none Avena sativa AVESA.00001b.r3.1Dg0003292 R-ASA-1127299-2 AVESA.00001b.r3.1Dg0003292 [cytosol] R-ASA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119437 Glutathione redox reactions I none Avena sativa AVESA.00001b.r3.1Dg0003297 R-ASA-9924379 HSFA2D [nucleoplasm] R-ASA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924451 Shoot (tiller) formation and regulation of tiller angle none Avena sativa AVESA.00001b.r3.1Dg0003334 R-ASA-9640756 AVESA.00001b.r3.1Dg0003334 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.1Dg0003354 R-ASA-9645947-2 AVESA.00001b.r3.1Dg0003354 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.1Dg0003354 R-ASA-9645947-2 AVESA.00001b.r3.1Dg0003354 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.1Dg0003354 R-ASA-9645947-2 AVESA.00001b.r3.1Dg0003354 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.1Dg0003354 R-ASA-9645947-2 AVESA.00001b.r3.1Dg0003354 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.1Dg0003354 R-ASA-9645947-2 AVESA.00001b.r3.1Dg0003354 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.1Dg0003370 R-ASA-1123470 AVESA.00001b.r3.1Dg0003370 [cytosol] R-ASA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119292 Cytokinins 7-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0003370 R-ASA-1123470 AVESA.00001b.r3.1Dg0003370 [cytosol] R-ASA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119375 Cytokinins 9-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0003370 R-ASA-1123470 AVESA.00001b.r3.1Dg0003370 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0003371 R-ASA-5655057-2 AVESA.00001b.r3.1Dg0003371 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0003418 R-ASA-1130136 AVESA.00001b.r3.1Dg0003418 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.1Dg0003418 R-ASA-1130136 AVESA.00001b.r3.1Dg0003418 [mitochondrial matrix] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0003424 R-ASA-1127899-2 AVESA.00001b.r3.1Dg0003424 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0003426 R-ASA-1124866-6 AVESA.00001b.r3.1Dg0003426 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0003433 R-ASA-1128263 AVESA.00001b.r3.1Dg0003433 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0003434 R-ASA-1128641 AVESA.00001b.r3.1Dg0003434 [cytosol] R-ASA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119331 Cysteine biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0003435 R-ASA-1250418-3 AVESA.00001b.r3.1Dg0003435 [cytosol] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0003435 R-ASA-1129305-3 AVESA.00001b.r3.1Dg0003435 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0003469 R-ASA-1126728 AVESA.00001b.r3.1Dg0003469 [plastid stroma] R-ASA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119424 Plastid glycolysis none Avena sativa AVESA.00001b.r3.1Dg0003477 R-ASA-9675876-2 AVESA.00001b.r3.1Dg0003477 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.1Dg0003477 R-ASA-9675876-2 AVESA.00001b.r3.1Dg0003477 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.1Dg0003477 R-ASA-9675876-2 AVESA.00001b.r3.1Dg0003477 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.1Dg0003482 R-ASA-1125494 AVESA.00001b.r3.1Dg0003482 [endoplasmic reticulum membrane] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.1Dg0003496 R-ASA-1126238-3 AVESA.00001b.r3.1Dg0003496 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0003520 R-ASA-8934063 AVESA.00001b.r3.1Dg0003520 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.1Dg0003520 R-ASA-8934063 AVESA.00001b.r3.1Dg0003520 [nucleoplasm] R-ASA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934108 Short day regulated expression of florigens none Avena sativa AVESA.00001b.r3.1Dg0003520 R-ASA-8934063 AVESA.00001b.r3.1Dg0003520 [nucleoplasm] R-ASA-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928946 Drought escape (DE) via ABA-independent pathway none Avena sativa AVESA.00001b.r3.1Dg0003549 R-ASA-1128328 AVESA.00001b.r3.1Dg0003549 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.1Dg0003556 R-ASA-1125834-5 AVESA.00001b.r3.1Dg0003556 [cytosol] R-ASA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119379 Flavin biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0003574 R-ASA-1126671-2 AVESA.00001b.r3.1Dg0003574 [cytosol] R-ASA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119534 Pyridoxal 5'-phosphate salvage pathway none Avena sativa AVESA.00001b.r3.1Dg0003574 R-ASA-1126671-2 AVESA.00001b.r3.1Dg0003574 [cytosol] R-ASA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119594 Pyridoxal 5'-phosphate biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0003602 R-ASA-1125194-2 AVESA.00001b.r3.1Dg0003602 [cytosol] R-ASA-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119484 Folate polyglutamylation II none Avena sativa AVESA.00001b.r3.1Dg0003602 R-ASA-1125194-2 AVESA.00001b.r3.1Dg0003602 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.1Dg0003602 R-ASA-1125194-2 AVESA.00001b.r3.1Dg0003602 [cytosol] R-ASA-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119617 Folate polyglutamylation I none Avena sativa AVESA.00001b.r3.1Dg0003681 R-ASA-1127076-7 AVESA.00001b.r3.1Dg0003681 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.1Dg0003681 R-ASA-1127076-7 AVESA.00001b.r3.1Dg0003681 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.2Ag0000001 R-ASA-9645872-2 AVESA.00001b.r3.2Ag0000001 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.2Ag0000002 R-ASA-1125612 AVESA.00001b.r3.2Ag0000002 [cytosol] R-ASA-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119353 Linear furanocoumarin biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0000032 R-ASA-1129816 AVESA.00001b.r3.2Ag0000032 [plastid stroma] R-ASA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119367 Polyisoprenoid biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0000032 R-ASA-1129816 AVESA.00001b.r3.2Ag0000032 [plastid stroma] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.2Ag0000064 R-ASA-1125494-6 AVESA.00001b.r3.2Ag0000064 [endoplasmic reticulum membrane] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.2Ag0000081 R-ASA-9918206-3 AVESA.00001b.r3.2Ag0000081 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0000135 R-ASA-9638996 AVESA.00001b.r3.2Ag0000135 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.2Ag0000162 R-ASA-9675357-3 AVESA.00001b.r3.2Ag0000162 [nucleoplasm] R-ASA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030680 Crown root development none Avena sativa AVESA.00001b.r3.2Ag0000170 R-ASA-9658589 AVESA.00001b.r3.2Ag0000170 [endoplasmic reticulum lumen] R-ASA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119502 Allantoin degradation none Avena sativa AVESA.00001b.r3.2Ag0000210 R-ASA-1123575 AVESA.00001b.r3.2Ag0000210 [cytosol] R-ASA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119297 Beta-alanine biosynthesis III none Avena sativa AVESA.00001b.r3.2Ag0000400 R-ASA-1125038-2 AVESA.00001b.r3.2Ag0000400 [plastid stroma] R-ASA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119449 Carotenoid biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0000439 R-ASA-9675274-2 AVESA.00001b.r3.2Ag0000439 [nucleoplasm] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.2Ag0000495 R-ASA-4723663 AVESA.00001b.r3.2Ag0000495 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.2Ag0000495 R-ASA-1126491 AVESA.00001b.r3.2Ag0000495 [cytosol] R-ASA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119594 Pyridoxal 5'-phosphate biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0000495 R-ASA-1126491 AVESA.00001b.r3.2Ag0000495 [cytosol] R-ASA-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119629 Thiamine biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0000498 R-ASA-1126269 AVESA.00001b.r3.2Ag0000498 [mitochondrial matrix] R-ASA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119479 Valine degradation none Avena sativa AVESA.00001b.r3.2Ag0000505 R-ASA-5655007 AVESA.00001b.r3.2Ag0000505 [Golgi lumen] R-ASA-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655010 Xylogalacturonan biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0000524 R-ASA-3321270 AVESA.00001b.r3.2Ag0000524 [chloroplast inner membrane] R-ASA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119287 Vitamin E biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0000562 R-ASA-1127089-2 AVESA.00001b.r3.2Ag0000562 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0000582 R-ASA-1128354 AVESA.00001b.r3.2Ag0000582 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0000605 R-ASA-1123860-2 AVESA.00001b.r3.2Ag0000605 [cytosol] R-ASA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119292 Cytokinins 7-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0000605 R-ASA-1123860-2 AVESA.00001b.r3.2Ag0000605 [cytosol] R-ASA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119375 Cytokinins 9-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0000605 R-ASA-1123860-2 AVESA.00001b.r3.2Ag0000605 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0000612 R-ASA-9611864-2 AVESA.00001b.r3.2Ag0000612 [mitochondrial matrix] R-ASA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119479 Valine degradation none Avena sativa AVESA.00001b.r3.2Ag0000654 R-ASA-1127467 AVESA.00001b.r3.2Ag0000654 [cytosol] R-ASA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119456 Brassinosteroid biosynthesis II none Avena sativa AVESA.00001b.r3.2Ag0000656 R-ASA-1127467-3 AVESA.00001b.r3.2Ag0000656 [cytosol] R-ASA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119456 Brassinosteroid biosynthesis II none Avena sativa AVESA.00001b.r3.2Ag0000679 R-ASA-5221149 AVESA.00001b.r3.2Ag0000679 [plastid] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0000683 R-ASA-8987473-2 AVESA.00001b.r3.2Ag0000683 [peroxisomal matrix] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.2Ag0000683 R-ASA-1122329-2 AVESA.00001b.r3.2Ag0000683 [cytosol] R-ASA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119596 Glutamate biosynthesis I none Avena sativa AVESA.00001b.r3.2Ag0000716 R-ASA-5632266-2 AVESA.00001b.r3.2Ag0000716 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.2Ag0000716 R-ASA-5632266-2 AVESA.00001b.r3.2Ag0000716 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.2Ag0000723 R-ASA-1125489 AVESA.00001b.r3.2Ag0000723 [Golgi membrane] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0000723 R-ASA-1125489 AVESA.00001b.r3.2Ag0000723 [Golgi membrane] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.2Ag0000723 R-ASA-1125489 AVESA.00001b.r3.2Ag0000723 [Golgi membrane] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.2Ag0000727 R-ASA-1129247 AVESA.00001b.r3.2Ag0000727 [mitochondrial inner membrane] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.2Ag0000789 R-ASA-9675439-5 AVESA.00001b.r3.2Ag0000789 [mitochondrial matrix] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.2Ag0000802 R-ASA-8934299-2 AVESA.00001b.r3.2Ag0000802 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.2Ag0000802 R-ASA-8934299-2 AVESA.00001b.r3.2Ag0000802 [nucleoplasm] R-ASA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934257 Transition from vegetative to reproductive shoot apical meristem none Avena sativa AVESA.00001b.r3.2Ag0000802 R-ASA-8934299-2 AVESA.00001b.r3.2Ag0000802 [nucleoplasm] R-ASA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609102 Flower development none Avena sativa AVESA.00001b.r3.2Ag0000803 R-ASA-8987548 AVESA.00001b.r3.2Ag0000803 [peroxisomal matrix] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.2Ag0000840 R-ASA-9916124 OsPRX95 [extracellular region] R-ASA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119403 Removal of superoxide radicals none Avena sativa AVESA.00001b.r3.2Ag0000840 R-ASA-9916124 OsPRX95 [extracellular region] R-ASA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9607185 Generation of superoxide radicals none Avena sativa AVESA.00001b.r3.2Ag0000868 R-ASA-9826615 RERJ1 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.2Ag0000877 R-ASA-1126320 AVESA.00001b.r3.2Ag0000877 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.2Ag0000892 R-ASA-1122369-2 AVESA.00001b.r3.2Ag0000892 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0000893 R-ASA-1124866 AVESA.00001b.r3.2Ag0000893 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0000945 R-ASA-9025712 AVESA.00001b.r3.2Ag0000945 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0000951 R-ASA-6787185-2 AVESA.00001b.r3.2Ag0000951 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Ag0000954 R-ASA-1128549-3 AVESA.00001b.r3.2Ag0000954 [cytosol] R-ASA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119449 Carotenoid biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0000977 R-ASA-9646043-2 AVESA.00001b.r3.2Ag0000977 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.2Ag0000977 R-ASA-9646043-2 AVESA.00001b.r3.2Ag0000977 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.2Ag0000977 R-ASA-9646043-2 AVESA.00001b.r3.2Ag0000977 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.2Ag0000977 R-ASA-9646043-2 AVESA.00001b.r3.2Ag0000977 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.2Ag0000977 R-ASA-9646043-2 AVESA.00001b.r3.2Ag0000977 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.2Ag0000997 R-ASA-5608203-3 AVESA.00001b.r3.2Ag0000997 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.2Ag0000997 R-ASA-5608203-3 AVESA.00001b.r3.2Ag0000997 [nucleoplasm] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.2Ag0000997 R-ASA-9658968-3 AVESA.00001b.r3.2Ag0000997 [cytosol] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.2Ag0001000 R-ASA-6787123 AVESA.00001b.r3.2Ag0001000 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Ag0001000 R-ASA-6786942 AVESA.00001b.r3.2Ag0001000 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Ag0001013 R-ASA-9930242-2 AVESA.00001b.r3.2Ag0001013 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.2Ag0001047 R-ASA-1122707-2 AVESA.00001b.r3.2Ag0001047 [cytosol] R-ASA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119389 Phenylalanine biosynthesis I none Avena sativa AVESA.00001b.r3.2Ag0001048 R-ASA-1128989 AVESA.00001b.r3.2Ag0001048 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.2Ag0001107 R-ASA-1124866-4 AVESA.00001b.r3.2Ag0001107 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0001201 R-ASA-1124401-2 AVESA.00001b.r3.2Ag0001201 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.2Ag0001243 R-ASA-1124087-3 AVESA.00001b.r3.2Ag0001243 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0001243 R-ASA-1124087-3 AVESA.00001b.r3.2Ag0001243 [cytosol] R-ASA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119618 13-LOX and 13-HPL pathway none Avena sativa AVESA.00001b.r3.2Ag0001247 R-ASA-1127019 AVESA.00001b.r3.2Ag0001247 [cytosol] R-ASA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119458 Glutamate degradation none Avena sativa AVESA.00001b.r3.2Ag0001253 R-ASA-9029354 AVESA.00001b.r3.2Ag0001253 [extracellular region] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.2Ag0001255 R-ASA-4754219-2 AVESA.00001b.r3.2Ag0001255 [plastid stroma] R-ASA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119449 Carotenoid biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0001275 R-ASA-1128835-2 AVESA.00001b.r3.2Ag0001275 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0001302 R-ASA-1127873 AVESA.00001b.r3.2Ag0001302 [plastid stroma] R-ASA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119424 Plastid glycolysis none Avena sativa AVESA.00001b.r3.2Ag0001302 R-ASA-1127873 AVESA.00001b.r3.2Ag0001302 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.2Ag0001321 R-ASA-5632200-2 AVESA.00001b.r3.2Ag0001321 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.2Ag0001329 R-ASA-1128637 AVESA.00001b.r3.2Ag0001329 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0001332 R-ASA-1123551 AVESA.00001b.r3.2Ag0001332 [chloroplast] R-ASA-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119579 Glycine betaine biosynthesis III none Avena sativa AVESA.00001b.r3.2Ag0001344 R-ASA-1125533-3 AVESA.00001b.r3.2Ag0001344 [cytosol] R-ASA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119304 Putrescine biosynthesis II none Avena sativa AVESA.00001b.r3.2Ag0001345 R-ASA-1125533 AVESA.00001b.r3.2Ag0001345 [cytosol] R-ASA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119304 Putrescine biosynthesis II none Avena sativa AVESA.00001b.r3.2Ag0001397 R-ASA-1130141 AVESA.00001b.r3.2Ag0001397 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.2Ag0001397 R-ASA-1130141 AVESA.00001b.r3.2Ag0001397 [mitochondrial matrix] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0001450 R-ASA-9675803-3 AVESA.00001b.r3.2Ag0001450 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.2Ag0001490 R-ASA-9675272-3 AVESA.00001b.r3.2Ag0001490 [plasma membrane] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.2Ag0001492 R-ASA-1123563 AVESA.00001b.r3.2Ag0001492 [cytosol] R-ASA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119379 Flavin biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0001496 R-ASA-1122932 AVESA.00001b.r3.2Ag0001496 [cytosol] R-ASA-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119317 Spermine biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0001496 R-ASA-1122932 AVESA.00001b.r3.2Ag0001496 [cytosol] R-ASA-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119343 Spermidine biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0001496 R-ASA-1122932 AVESA.00001b.r3.2Ag0001496 [cytosol] R-ASA-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119446 Lysine degradation I none Avena sativa AVESA.00001b.r3.2Ag0001504 R-ASA-1125317-3 AVESA.00001b.r3.2Ag0001504 [cytosol] R-ASA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119316 Phenylpropanoid biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0001586 R-ASA-1128298-4 AVESA.00001b.r3.2Ag0001586 [cytosol] R-ASA-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119271 Threonine degradation none Avena sativa AVESA.00001b.r3.2Ag0001586 R-ASA-1128298-4 AVESA.00001b.r3.2Ag0001586 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.2Ag0001599 R-ASA-1127614-11 AVESA.00001b.r3.2Ag0001599 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0001599 R-ASA-1127614-11 AVESA.00001b.r3.2Ag0001599 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0001599 R-ASA-1127614-11 AVESA.00001b.r3.2Ag0001599 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.2Ag0001600 R-ASA-1127614-3 AVESA.00001b.r3.2Ag0001600 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0001600 R-ASA-1127614-3 AVESA.00001b.r3.2Ag0001600 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0001600 R-ASA-1127614-3 AVESA.00001b.r3.2Ag0001600 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.2Ag0001601 R-ASA-1127614 AVESA.00001b.r3.2Ag0001601 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0001601 R-ASA-1127614 AVESA.00001b.r3.2Ag0001601 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0001601 R-ASA-1127614 AVESA.00001b.r3.2Ag0001601 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.2Ag0001602 R-ASA-1127614-2 AVESA.00001b.r3.2Ag0001602 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0001602 R-ASA-1127614-2 AVESA.00001b.r3.2Ag0001602 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0001602 R-ASA-1127614-2 AVESA.00001b.r3.2Ag0001602 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.2Ag0001612 R-ASA-2685732-2 AVESA.00001b.r3.2Ag0001612 [cytosol] R-ASA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119580 IAA biosynthesis II none Avena sativa AVESA.00001b.r3.2Ag0001645 R-ASA-9025541-2 AVESA.00001b.r3.2Ag0001645 [endoplasmic reticulum membrane] R-ASA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119325 Sphingolipid metabolism none Avena sativa AVESA.00001b.r3.2Ag0001659 R-ASA-9826598 AVESA.00001b.r3.2Ag0001659 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.2Ag0001696 R-ASA-9025791-3 AVESA.00001b.r3.2Ag0001696 [plasma membrane] R-ASA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025727 Iron uptake and transport in root vascular system none Avena sativa AVESA.00001b.r3.2Ag0001713 R-ASA-6786973 AVESA.00001b.r3.2Ag0001713 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Ag0001730 R-ASA-1128812-2 AVESA.00001b.r3.2Ag0001730 [cytosol] R-ASA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119393 Asparagine degradation I none Avena sativa AVESA.00001b.r3.2Ag0001734 R-ASA-5138507 AVESA.00001b.r3.2Ag0001734 [plastid stroma] R-ASA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119263 Arginine biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0001734 R-ASA-5138507 AVESA.00001b.r3.2Ag0001734 [plastid stroma] R-ASA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119539 Ornithine biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0001734 R-ASA-5138507 AVESA.00001b.r3.2Ag0001734 [plastid stroma] R-ASA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119622 Arginine biosynthesis II (acetyl cycle) none Avena sativa AVESA.00001b.r3.2Ag0001735 R-ASA-5367777-2 AVESA.00001b.r3.2Ag0001735 [plastid stroma] R-ASA-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5367729 Strigolactone biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0001758 R-ASA-1126615-3 AVESA.00001b.r3.2Ag0001758 [cytosol] R-ASA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119437 Glutathione redox reactions I none Avena sativa AVESA.00001b.r3.2Ag0001779 R-ASA-1129277-3 AVESA.00001b.r3.2Ag0001779 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.2Ag0001779 R-ASA-1129277-3 AVESA.00001b.r3.2Ag0001779 [cytosol] R-ASA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119496 Pantothenate biosynthesis I none Avena sativa AVESA.00001b.r3.2Ag0001779 R-ASA-1129277-3 AVESA.00001b.r3.2Ag0001779 [cytosol] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0001779 R-ASA-1129277-3 AVESA.00001b.r3.2Ag0001779 [cytosol] R-ASA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119544 Pantothenate biosynthesis II none Avena sativa AVESA.00001b.r3.2Ag0001793 R-ASA-1128815 AVESA.00001b.r3.2Ag0001793 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.2Ag0001793 R-ASA-1128815 AVESA.00001b.r3.2Ag0001793 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0001822 R-ASA-9675851-2 AVESA.00001b.r3.2Ag0001822 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.2Ag0001831 R-ASA-8879071 CBF1 homolog [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.2Ag0001841 R-ASA-3899389-3 AVESA.00001b.r3.2Ag0001841 [plasma membrane] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.2Ag0001841 R-ASA-3899371-3 phospho-AVESA.00001b.r3.2Ag0001841 [plasma membrane] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.2Ag0001842 R-ASA-1126602 AVESA.00001b.r3.2Ag0001842 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.2Ag0001842 R-ASA-1126602 AVESA.00001b.r3.2Ag0001842 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.2Ag0001842 R-ASA-5606494 AVESA.00001b.r3.2Ag0001842 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.2Ag0001844 R-ASA-1125093-3 AVESA.00001b.r3.2Ag0001844 [cytosol] R-ASA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119456 Brassinosteroid biosynthesis II none Avena sativa AVESA.00001b.r3.2Ag0001855 R-ASA-1129892-3 AVESA.00001b.r3.2Ag0001855 [cytosol] R-ASA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119334 Ethylene biosynthesis from methionine none Avena sativa AVESA.00001b.r3.2Ag0001855 R-ASA-1129892-3 AVESA.00001b.r3.2Ag0001855 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.2Ag0001882 R-ASA-5221147-2 AVESA.00001b.r3.2Ag0001882 [cytosol] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.2Ag0001910 R-ASA-9675878-3 AVESA.00001b.r3.2Ag0001910 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.2Ag0001911 R-ASA-9640782-2 AVESA.00001b.r3.2Ag0001911 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.2Ag0001918 R-ASA-1125974-3 AVESA.00001b.r3.2Ag0001918 [cytosol] R-ASA-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119262 Threonine biosynthesis from homoserine none Avena sativa AVESA.00001b.r3.2Ag0001918 R-ASA-1125974-3 AVESA.00001b.r3.2Ag0001918 [cytosol] R-ASA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119400 Methionine biosynthesis II none Avena sativa AVESA.00001b.r3.2Ag0002010 R-ASA-1127820 AVESA.00001b.r3.2Ag0002010 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0002014 R-ASA-1129245-6 AVESA.00001b.r3.2Ag0002014 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0002014 R-ASA-1129245-6 AVESA.00001b.r3.2Ag0002014 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0002014 R-ASA-1129245-6 AVESA.00001b.r3.2Ag0002014 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.2Ag0002015 R-ASA-1129245-9 AVESA.00001b.r3.2Ag0002015 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0002015 R-ASA-1129245-9 AVESA.00001b.r3.2Ag0002015 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0002015 R-ASA-1129245-9 AVESA.00001b.r3.2Ag0002015 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.2Ag0002025 R-ASA-2731026-2 AVESA.00001b.r3.2Ag0002025 [endoplasmic reticulum membrane] R-ASA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119557 GA12 biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0002025 R-ASA-1130405-2 AVESA.00001b.r3.2Ag0002025 [endoplasmic reticulum membrane] R-ASA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119557 GA12 biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0002073 R-ASA-9026148-3 AVESA.00001b.r3.2Ag0002073 [mitochondrion] R-ASA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119458 Glutamate degradation none Avena sativa AVESA.00001b.r3.2Ag0002089 R-ASA-1124921-2 AVESA.00001b.r3.2Ag0002089 [cytosol] R-ASA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0002091 R-ASA-1125584-2 AVESA.00001b.r3.2Ag0002091 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.2Ag0002095 R-ASA-1129564-3 AVESA.00001b.r3.2Ag0002095 [cytosol] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0002095 R-ASA-9681913-3 AVESA.00001b.r3.2Ag0002095 [Golgi membrane] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.2Ag0002095 R-ASA-1129564-3 AVESA.00001b.r3.2Ag0002095 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.2Ag0002100 R-ASA-8879040-2 AVESA.00001b.r3.2Ag0002100 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.2Ag0002105 R-ASA-9618186-2 AVESA.00001b.r3.2Ag0002105 [plant-type vacuole membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.2Ag0002114 R-ASA-1127383 AVESA.00001b.r3.2Ag0002114 [cytosol] R-ASA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119596 Glutamate biosynthesis I none Avena sativa AVESA.00001b.r3.2Ag0002115 R-ASA-8987488 AVESA.00001b.r3.2Ag0002115 [mitochondrial matrix] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.2Ag0002120 R-ASA-1127243 AVESA.00001b.r3.2Ag0002120 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0002121 R-ASA-1250419-10 AVESA.00001b.r3.2Ag0002121 [cytosol] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0002121 R-ASA-1129637-10 AVESA.00001b.r3.2Ag0002121 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.2Ag0002190 R-ASA-6786926-2 AVESA.00001b.r3.2Ag0002190 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Ag0002210 R-ASA-1130308 AVESA.00001b.r3.2Ag0002210 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0002238 R-ASA-1126860-2 AVESA.00001b.r3.2Ag0002238 [cytosol] R-ASA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119321 Glycerol degradation I none Avena sativa AVESA.00001b.r3.2Ag0002243 R-ASA-9920344 AVESA.00001b.r3.2Ag0002243 [nucleoplasm] R-ASA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934108 Short day regulated expression of florigens none Avena sativa AVESA.00001b.r3.2Ag0002260 R-ASA-5654750-3 AVESA.00001b.r3.2Ag0002260 [cytosol] R-ASA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119393 Asparagine degradation I none Avena sativa AVESA.00001b.r3.2Ag0002262 R-ASA-5654750-6 AVESA.00001b.r3.2Ag0002262 [cytosol] R-ASA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119393 Asparagine degradation I none Avena sativa AVESA.00001b.r3.2Ag0002274 R-ASA-6787173 AVESA.00001b.r3.2Ag0002274 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Ag0002274 R-ASA-6786972 AVESA.00001b.r3.2Ag0002274 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Ag0002311 R-ASA-9681905-2 AVESA.00001b.r3.2Ag0002311 [Golgi membrane] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.2Ag0002318 R-ASA-2672431 AVESA.00001b.r3.2Ag0002318 [cytosol] R-ASA-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119322 Leucodelphinidin biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0002318 R-ASA-2672431 AVESA.00001b.r3.2Ag0002318 [cytosol] R-ASA-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0002318 R-ASA-1124195 AVESA.00001b.r3.2Ag0002318 [cytosol] R-ASA-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119531 Flavonoid biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0002328 R-ASA-5608137-2 AVESA.00001b.r3.2Ag0002328 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.2Ag0002357 R-ASA-1123465 AVESA.00001b.r3.2Ag0002357 [plastid stroma] R-ASA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119424 Plastid glycolysis none Avena sativa AVESA.00001b.r3.2Ag0002357 R-ASA-5633368 AVESA.00001b.r3.2Ag0002357 [cytosol] R-ASA-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119601 Trehalose degradation II none Avena sativa AVESA.00001b.r3.2Ag0002376 R-ASA-1126636-5 AVESA.00001b.r3.2Ag0002376 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0002417 R-ASA-5632120 AVESA.00001b.r3.2Ag0002417 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.2Ag0002428 R-ASA-6787012 AVESA.00001b.r3.2Ag0002428 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Ag0002432 R-ASA-1126307 AVESA.00001b.r3.2Ag0002432 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0002499 R-ASA-1127170-2 AVESA.00001b.r3.2Ag0002499 [cytosol] R-ASA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119276 Choline biosynthesis III none Avena sativa AVESA.00001b.r3.2Ag0002527 R-ASA-5149694-3 AVESA.00001b.r3.2Ag0002527 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.2Ag0002560 R-ASA-1125277-2 AVESA.00001b.r3.2Ag0002560 [cytosol] R-ASA-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119278 PRPP biosynthesis I none Avena sativa AVESA.00001b.r3.2Ag0002600 R-ASA-1126400 AVESA.00001b.r3.2Ag0002600 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0002680 R-ASA-1128178-3 AVESA.00001b.r3.2Ag0002680 [cytosol] R-ASA-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119322 Leucodelphinidin biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0002680 R-ASA-1128178-3 AVESA.00001b.r3.2Ag0002680 [cytosol] R-ASA-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0002680 R-ASA-9609575-3 AVESA.00001b.r3.2Ag0002680 [endoplasmic reticulum membrane] R-ASA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609573 Tricin biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0002692 R-ASA-4827046 AVESA.00001b.r3.2Ag0002692 [plastid stroma] R-ASA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-4827054 Tetrapyrrole biosynthesis I none Avena sativa AVESA.00001b.r3.2Ag0002714 R-ASA-3240749 AVESA.00001b.r3.2Ag0002714 [cytosol] R-ASA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Avena sativa AVESA.00001b.r3.2Ag0002714 R-ASA-9681918 AVESA.00001b.r3.2Ag0002714 [cytosol] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.2Ag0002729 R-ASA-1129880 AVESA.00001b.r3.2Ag0002729 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.2Ag0002780 R-ASA-8933763-3 AVESA.00001b.r3.2Ag0002780 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.2Ag0002783 R-ASA-2685721-3 AVESA.00001b.r3.2Ag0002783 [cytosol] R-ASA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119580 IAA biosynthesis II none Avena sativa AVESA.00001b.r3.2Ag0002794 R-ASA-9645838 AVESA.00001b.r3.2Ag0002794 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.2Ag0002794 R-ASA-9645838 AVESA.00001b.r3.2Ag0002794 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.2Ag0002794 R-ASA-9645838 AVESA.00001b.r3.2Ag0002794 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.2Cg0000004 R-ASA-9618057 AVESA.00001b.r3.2Cg0000004 [cytosol] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.2Cg0000015 R-ASA-5603891 AVESA.00001b.r3.2Cg0000015 [plastid stroma] R-ASA-1119420 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119420 Glutamate biosynthesis V none Avena sativa AVESA.00001b.r3.2Cg0000015 R-ASA-1125410 AVESA.00001b.r3.2Cg0000015 [chloroplast stroma] R-ASA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119443 Ammonia assimilation cycle none Avena sativa AVESA.00001b.r3.2Cg0000021 R-ASA-9611465-2 AVESA.00001b.r3.2Cg0000021 [nucleoplasm] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.2Cg0000021 R-ASA-9611445-2 AVESA.00001b.r3.2Cg0000021 [nucleoplasm] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.2Cg0000116 R-ASA-2685731-3 AVESA.00001b.r3.2Cg0000116 [cytosol] R-ASA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119580 IAA biosynthesis II none Avena sativa AVESA.00001b.r3.2Cg0000122 R-ASA-1130302-3 AVESA.00001b.r3.2Cg0000122 [cytosol] R-ASA-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119451 Xylose degradation none Avena sativa AVESA.00001b.r3.2Cg0000193 R-ASA-9640752 AVESA.00001b.r3.2Cg0000193 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.2Cg0000193 R-ASA-9640752 AVESA.00001b.r3.2Cg0000193 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.2Cg0000235 R-ASA-1122845-3 AVESA.00001b.r3.2Cg0000235 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0000264 R-ASA-1129585-3 AVESA.00001b.r3.2Cg0000264 [cytosol] R-ASA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119265 Tetrahydrofolate biosynthesis I none Avena sativa AVESA.00001b.r3.2Cg0000264 R-ASA-1129585-3 AVESA.00001b.r3.2Cg0000264 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.2Cg0000276 R-ASA-1129561-2 AVESA.00001b.r3.2Cg0000276 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.2Cg0000276 R-ASA-1129561-2 AVESA.00001b.r3.2Cg0000276 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0000278 R-ASA-1130222-3 AVESA.00001b.r3.2Cg0000278 [cytosol] R-ASA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119596 Glutamate biosynthesis I none Avena sativa AVESA.00001b.r3.2Cg0000288 R-ASA-5679443-2 AVESA.00001b.r3.2Cg0000288 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.2Cg0000288 R-ASA-5679443-2 AVESA.00001b.r3.2Cg0000288 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Cg0000288 R-ASA-6787090-2 AVESA.00001b.r3.2Cg0000288 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Cg0000295 R-ASA-1123534-2 AVESA.00001b.r3.2Cg0000295 [cytosol] R-ASA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119438 Secologanin and strictosidine biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0000325 R-ASA-9681895 AVESA.00001b.r3.2Cg0000325 [Golgi membrane] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.2Cg0000335 R-ASA-1129569 AVESA.00001b.r3.2Cg0000335 [cytosol] R-ASA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119379 Flavin biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0000340 R-ASA-6787141-3 AVESA.00001b.r3.2Cg0000340 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Cg0000370 R-ASA-1123534-3 AVESA.00001b.r3.2Cg0000370 [cytosol] R-ASA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119438 Secologanin and strictosidine biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0000387 R-ASA-1123819-3 AVESA.00001b.r3.2Cg0000387 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.2Cg0000450 R-ASA-5632334 AVESA.00001b.r3.2Cg0000450 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.2Cg0000450 R-ASA-5632197 phospho-AVESA.00001b.r3.2Cg0000450 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.2Cg0000450 R-ASA-5632183 phospho-AVESA.00001b.r3.2Cg0000450 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.2Cg0000450 R-ASA-5632334 AVESA.00001b.r3.2Cg0000450 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.2Cg0000463 R-ASA-1125237 AVESA.00001b.r3.2Cg0000463 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.2Cg0000515 R-ASA-1127614-8 AVESA.00001b.r3.2Cg0000515 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0000515 R-ASA-1127614-8 AVESA.00001b.r3.2Cg0000515 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0000515 R-ASA-1127614-8 AVESA.00001b.r3.2Cg0000515 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.2Cg0000547 R-ASA-1127076-2 AVESA.00001b.r3.2Cg0000547 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0000547 R-ASA-1127076-2 AVESA.00001b.r3.2Cg0000547 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.2Cg0000624 R-ASA-1129816-3 AVESA.00001b.r3.2Cg0000624 [plastid stroma] R-ASA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119367 Polyisoprenoid biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0000624 R-ASA-1129816-3 AVESA.00001b.r3.2Cg0000624 [plastid stroma] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.2Cg0000658 R-ASA-1125494-3 AVESA.00001b.r3.2Cg0000658 [endoplasmic reticulum membrane] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.2Cg0000675 R-ASA-9918206 AVESA.00001b.r3.2Cg0000675 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0000740 R-ASA-9638996-3 AVESA.00001b.r3.2Cg0000740 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.2Cg0000746 R-ASA-9035727 AVESA.00001b.r3.2Cg0000746 [cytosol] R-ASA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9035605 Regulation of seed size none Avena sativa AVESA.00001b.r3.2Cg0000746 R-ASA-9035692 AVESA.00001b.r3.2Cg0000746 [nucleoplasm] R-ASA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9035605 Regulation of seed size none Avena sativa AVESA.00001b.r3.2Cg0000770 R-ASA-9675357 AVESA.00001b.r3.2Cg0000770 [nucleoplasm] R-ASA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030680 Crown root development none Avena sativa AVESA.00001b.r3.2Cg0000778 R-ASA-5146760-2 AVESA.00001b.r3.2Cg0000778 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.2Cg0000788 R-ASA-9658589-2 AVESA.00001b.r3.2Cg0000788 [endoplasmic reticulum lumen] R-ASA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119502 Allantoin degradation none Avena sativa AVESA.00001b.r3.2Cg0000830 R-ASA-1123575-3 AVESA.00001b.r3.2Cg0000830 [cytosol] R-ASA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119297 Beta-alanine biosynthesis III none Avena sativa AVESA.00001b.r3.2Cg0000851 R-ASA-9025329 AVESA.00001b.r3.2Cg0000851 [chloroplast stroma] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.2Cg0000851 R-ASA-1125388 AVESA.00001b.r3.2Cg0000851 [cytosol] R-ASA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119496 Pantothenate biosynthesis I none Avena sativa AVESA.00001b.r3.2Cg0000851 R-ASA-1125388 AVESA.00001b.r3.2Cg0000851 [cytosol] R-ASA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119544 Pantothenate biosynthesis II none Avena sativa AVESA.00001b.r3.2Cg0000905 R-ASA-1127089 AVESA.00001b.r3.2Cg0000905 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0000943 R-ASA-5655007-2 AVESA.00001b.r3.2Cg0000943 [Golgi lumen] R-ASA-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655010 Xylogalacturonan biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0000945 R-ASA-1126269-2 AVESA.00001b.r3.2Cg0000945 [mitochondrial matrix] R-ASA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119479 Valine degradation none Avena sativa AVESA.00001b.r3.2Cg0000957 R-ASA-4723663-2 AVESA.00001b.r3.2Cg0000957 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.2Cg0000957 R-ASA-1126491-2 AVESA.00001b.r3.2Cg0000957 [cytosol] R-ASA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119594 Pyridoxal 5'-phosphate biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0000957 R-ASA-1126491-2 AVESA.00001b.r3.2Cg0000957 [cytosol] R-ASA-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119629 Thiamine biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0001032 R-ASA-1125038-3 AVESA.00001b.r3.2Cg0001032 [plastid stroma] R-ASA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119449 Carotenoid biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0001080 R-ASA-2885386 AVESA.00001b.r3.2Cg0001080 [cytosol] R-ASA-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119417 Stachyose biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0001103 R-ASA-9675274 AVESA.00001b.r3.2Cg0001103 [nucleoplasm] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.2Cg0001265 R-ASA-9025739 AVESA.00001b.r3.2Cg0001265 [plasma membrane] R-ASA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025727 Iron uptake and transport in root vascular system none Avena sativa AVESA.00001b.r3.2Cg0001265 R-ASA-9025739 AVESA.00001b.r3.2Cg0001265 [plasma membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.2Cg0001302 R-ASA-9611864-3 AVESA.00001b.r3.2Cg0001302 [mitochondrial matrix] R-ASA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119479 Valine degradation none Avena sativa AVESA.00001b.r3.2Cg0001345 R-ASA-1127467-6 AVESA.00001b.r3.2Cg0001345 [cytosol] R-ASA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119456 Brassinosteroid biosynthesis II none Avena sativa AVESA.00001b.r3.2Cg0001349 R-ASA-1127467-5 AVESA.00001b.r3.2Cg0001349 [cytosol] R-ASA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119456 Brassinosteroid biosynthesis II none Avena sativa AVESA.00001b.r3.2Cg0001370 R-ASA-5221149-3 AVESA.00001b.r3.2Cg0001370 [plastid] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0001373 R-ASA-8987473 AVESA.00001b.r3.2Cg0001373 [peroxisomal matrix] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.2Cg0001373 R-ASA-1122329 AVESA.00001b.r3.2Cg0001373 [cytosol] R-ASA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119596 Glutamate biosynthesis I none Avena sativa AVESA.00001b.r3.2Cg0001394 R-ASA-5632266-3 AVESA.00001b.r3.2Cg0001394 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.2Cg0001394 R-ASA-5632266-3 AVESA.00001b.r3.2Cg0001394 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.2Cg0001405 R-ASA-1125489-3 AVESA.00001b.r3.2Cg0001405 [Golgi membrane] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0001405 R-ASA-1125489-3 AVESA.00001b.r3.2Cg0001405 [Golgi membrane] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.2Cg0001405 R-ASA-1125489-3 AVESA.00001b.r3.2Cg0001405 [Golgi membrane] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.2Cg0001409 R-ASA-1129247-3 AVESA.00001b.r3.2Cg0001409 [mitochondrial inner membrane] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.2Cg0001495 R-ASA-8987548-2 AVESA.00001b.r3.2Cg0001495 [peroxisomal matrix] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.2Cg0001497 R-ASA-8934299-3 AVESA.00001b.r3.2Cg0001497 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.2Cg0001497 R-ASA-8934299-3 AVESA.00001b.r3.2Cg0001497 [nucleoplasm] R-ASA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934257 Transition from vegetative to reproductive shoot apical meristem none Avena sativa AVESA.00001b.r3.2Cg0001497 R-ASA-8934299-3 AVESA.00001b.r3.2Cg0001497 [nucleoplasm] R-ASA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609102 Flower development none Avena sativa AVESA.00001b.r3.2Cg0001541 R-ASA-9916124-3 OsPRX95 [extracellular region] R-ASA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119403 Removal of superoxide radicals none Avena sativa AVESA.00001b.r3.2Cg0001541 R-ASA-9916124-3 OsPRX95 [extracellular region] R-ASA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9607185 Generation of superoxide radicals none Avena sativa AVESA.00001b.r3.2Cg0001580 R-ASA-9826615-3 RERJ1 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.2Cg0001590 R-ASA-1129879 AVESA.00001b.r3.2Cg0001590 [cytosol] R-ASA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119436 Peptidoglycan biosynthesis I none Avena sativa AVESA.00001b.r3.2Cg0001656 R-ASA-9025712-4 AVESA.00001b.r3.2Cg0001656 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0001662 R-ASA-6787185 AVESA.00001b.r3.2Cg0001662 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Cg0001665 R-ASA-1128549-2 AVESA.00001b.r3.2Cg0001665 [cytosol] R-ASA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119449 Carotenoid biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0001695 R-ASA-9646043-3 AVESA.00001b.r3.2Cg0001695 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.2Cg0001695 R-ASA-9646043-3 AVESA.00001b.r3.2Cg0001695 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.2Cg0001695 R-ASA-9646043-3 AVESA.00001b.r3.2Cg0001695 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.2Cg0001695 R-ASA-9646043-3 AVESA.00001b.r3.2Cg0001695 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.2Cg0001695 R-ASA-9646043-3 AVESA.00001b.r3.2Cg0001695 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.2Cg0001719 R-ASA-5608203-2 AVESA.00001b.r3.2Cg0001719 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.2Cg0001719 R-ASA-5608203-2 AVESA.00001b.r3.2Cg0001719 [nucleoplasm] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.2Cg0001719 R-ASA-9658968-2 AVESA.00001b.r3.2Cg0001719 [cytosol] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.2Cg0001721 R-ASA-6787123-2 AVESA.00001b.r3.2Cg0001721 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Cg0001721 R-ASA-6786942-2 AVESA.00001b.r3.2Cg0001721 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Cg0001732 R-ASA-9930242-3 AVESA.00001b.r3.2Cg0001732 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.2Cg0001775 R-ASA-1122707-3 AVESA.00001b.r3.2Cg0001775 [cytosol] R-ASA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119389 Phenylalanine biosynthesis I none Avena sativa AVESA.00001b.r3.2Cg0001776 R-ASA-1128989-2 AVESA.00001b.r3.2Cg0001776 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.2Cg0001800 R-ASA-1124977 AVESA.00001b.r3.2Cg0001800 [cytosol] R-ASA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119586 Cyanate degradation none Avena sativa AVESA.00001b.r3.2Cg0001837 R-ASA-1124866-5 AVESA.00001b.r3.2Cg0001837 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0001838 R-ASA-1129697 AVESA.00001b.r3.2Cg0001838 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0001937 R-ASA-1124401-3 AVESA.00001b.r3.2Cg0001937 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.2Cg0001981 R-ASA-1124087-2 AVESA.00001b.r3.2Cg0001981 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0001981 R-ASA-1124087-2 AVESA.00001b.r3.2Cg0001981 [cytosol] R-ASA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119618 13-LOX and 13-HPL pathway none Avena sativa AVESA.00001b.r3.2Cg0001990 R-ASA-4754219-3 AVESA.00001b.r3.2Cg0001990 [plastid stroma] R-ASA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119449 Carotenoid biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002007 R-ASA-1128835-3 AVESA.00001b.r3.2Cg0002007 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002008 R-ASA-9682527-2 AVESA.00001b.r3.2Cg0002008 [cytosol] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002033 R-ASA-1127873-3 AVESA.00001b.r3.2Cg0002033 [plastid stroma] R-ASA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119424 Plastid glycolysis none Avena sativa AVESA.00001b.r3.2Cg0002033 R-ASA-1127873-3 AVESA.00001b.r3.2Cg0002033 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.2Cg0002048 R-ASA-5632200-3 AVESA.00001b.r3.2Cg0002048 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.2Cg0002053 R-ASA-1128637-3 AVESA.00001b.r3.2Cg0002053 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002057 R-ASA-1123551-3 AVESA.00001b.r3.2Cg0002057 [chloroplast] R-ASA-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119579 Glycine betaine biosynthesis III none Avena sativa AVESA.00001b.r3.2Cg0002071 R-ASA-1125533-6 AVESA.00001b.r3.2Cg0002071 [cytosol] R-ASA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119304 Putrescine biosynthesis II none Avena sativa AVESA.00001b.r3.2Cg0002072 R-ASA-1125533-4 AVESA.00001b.r3.2Cg0002072 [cytosol] R-ASA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119304 Putrescine biosynthesis II none Avena sativa AVESA.00001b.r3.2Cg0002113 R-ASA-1130141-3 AVESA.00001b.r3.2Cg0002113 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.2Cg0002113 R-ASA-1130141-3 AVESA.00001b.r3.2Cg0002113 [mitochondrial matrix] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002204 R-ASA-9675272 AVESA.00001b.r3.2Cg0002204 [plasma membrane] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.2Cg0002207 R-ASA-1123563-3 AVESA.00001b.r3.2Cg0002207 [cytosol] R-ASA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119379 Flavin biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002211 R-ASA-1122932-3 AVESA.00001b.r3.2Cg0002211 [cytosol] R-ASA-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119317 Spermine biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002211 R-ASA-1122932-3 AVESA.00001b.r3.2Cg0002211 [cytosol] R-ASA-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119343 Spermidine biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002211 R-ASA-1122932-3 AVESA.00001b.r3.2Cg0002211 [cytosol] R-ASA-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119446 Lysine degradation I none Avena sativa AVESA.00001b.r3.2Cg0002219 R-ASA-1125317 AVESA.00001b.r3.2Cg0002219 [cytosol] R-ASA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119316 Phenylpropanoid biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002304 R-ASA-1128298-5 AVESA.00001b.r3.2Cg0002304 [cytosol] R-ASA-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119271 Threonine degradation none Avena sativa AVESA.00001b.r3.2Cg0002304 R-ASA-1128298-5 AVESA.00001b.r3.2Cg0002304 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.2Cg0002316 R-ASA-1127614-17 AVESA.00001b.r3.2Cg0002316 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002316 R-ASA-1127614-17 AVESA.00001b.r3.2Cg0002316 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002316 R-ASA-1127614-17 AVESA.00001b.r3.2Cg0002316 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.2Cg0002317 R-ASA-1127614-4 AVESA.00001b.r3.2Cg0002317 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002317 R-ASA-1127614-4 AVESA.00001b.r3.2Cg0002317 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002317 R-ASA-1127614-4 AVESA.00001b.r3.2Cg0002317 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.2Cg0002318 R-ASA-1127614-9 AVESA.00001b.r3.2Cg0002318 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002318 R-ASA-1127614-9 AVESA.00001b.r3.2Cg0002318 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002318 R-ASA-1127614-9 AVESA.00001b.r3.2Cg0002318 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.2Cg0002329 R-ASA-2685732-3 AVESA.00001b.r3.2Cg0002329 [cytosol] R-ASA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119580 IAA biosynthesis II none Avena sativa AVESA.00001b.r3.2Cg0002363 R-ASA-9025541-3 AVESA.00001b.r3.2Cg0002363 [endoplasmic reticulum membrane] R-ASA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119325 Sphingolipid metabolism none Avena sativa AVESA.00001b.r3.2Cg0002389 R-ASA-1122855 AVESA.00001b.r3.2Cg0002389 [cytosol] R-ASA-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119360 Fructan biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002416 R-ASA-9025791-2 AVESA.00001b.r3.2Cg0002416 [plasma membrane] R-ASA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025727 Iron uptake and transport in root vascular system none Avena sativa AVESA.00001b.r3.2Cg0002440 R-ASA-1128812 AVESA.00001b.r3.2Cg0002440 [cytosol] R-ASA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119393 Asparagine degradation I none Avena sativa AVESA.00001b.r3.2Cg0002444 R-ASA-5138507-2 AVESA.00001b.r3.2Cg0002444 [plastid stroma] R-ASA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119263 Arginine biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002444 R-ASA-5138507-2 AVESA.00001b.r3.2Cg0002444 [plastid stroma] R-ASA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119539 Ornithine biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002444 R-ASA-5138507-2 AVESA.00001b.r3.2Cg0002444 [plastid stroma] R-ASA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119622 Arginine biosynthesis II (acetyl cycle) none Avena sativa AVESA.00001b.r3.2Cg0002465 R-ASA-1126615 AVESA.00001b.r3.2Cg0002465 [cytosol] R-ASA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119437 Glutathione redox reactions I none Avena sativa AVESA.00001b.r3.2Cg0002482 R-ASA-1129277-2 AVESA.00001b.r3.2Cg0002482 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.2Cg0002482 R-ASA-1129277-2 AVESA.00001b.r3.2Cg0002482 [cytosol] R-ASA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119496 Pantothenate biosynthesis I none Avena sativa AVESA.00001b.r3.2Cg0002482 R-ASA-1129277-2 AVESA.00001b.r3.2Cg0002482 [cytosol] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002482 R-ASA-1129277-2 AVESA.00001b.r3.2Cg0002482 [cytosol] R-ASA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119544 Pantothenate biosynthesis II none Avena sativa AVESA.00001b.r3.2Cg0002499 R-ASA-1128815-3 AVESA.00001b.r3.2Cg0002499 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.2Cg0002499 R-ASA-1128815-3 AVESA.00001b.r3.2Cg0002499 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002523 R-ASA-9675851 AVESA.00001b.r3.2Cg0002523 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.2Cg0002532 R-ASA-8879071-2 CBF1 homolog [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.2Cg0002545 R-ASA-3899389 AVESA.00001b.r3.2Cg0002545 [plasma membrane] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.2Cg0002545 R-ASA-3899371 phospho-AVESA.00001b.r3.2Cg0002545 [plasma membrane] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.2Cg0002546 R-ASA-1126602-3 AVESA.00001b.r3.2Cg0002546 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.2Cg0002546 R-ASA-1126602-3 AVESA.00001b.r3.2Cg0002546 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.2Cg0002546 R-ASA-5606494-3 AVESA.00001b.r3.2Cg0002546 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.2Cg0002549 R-ASA-1125093 AVESA.00001b.r3.2Cg0002549 [cytosol] R-ASA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119456 Brassinosteroid biosynthesis II none Avena sativa AVESA.00001b.r3.2Cg0002556 R-ASA-1129892-2 AVESA.00001b.r3.2Cg0002556 [cytosol] R-ASA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119334 Ethylene biosynthesis from methionine none Avena sativa AVESA.00001b.r3.2Cg0002556 R-ASA-1129892-2 AVESA.00001b.r3.2Cg0002556 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.2Cg0002578 R-ASA-5221147 AVESA.00001b.r3.2Cg0002578 [cytosol] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.2Cg0002606 R-ASA-9675878-2 AVESA.00001b.r3.2Cg0002606 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.2Cg0002607 R-ASA-9640782-3 AVESA.00001b.r3.2Cg0002607 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.2Cg0002614 R-ASA-1125974 AVESA.00001b.r3.2Cg0002614 [cytosol] R-ASA-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119262 Threonine biosynthesis from homoserine none Avena sativa AVESA.00001b.r3.2Cg0002614 R-ASA-1125974 AVESA.00001b.r3.2Cg0002614 [cytosol] R-ASA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119400 Methionine biosynthesis II none Avena sativa AVESA.00001b.r3.2Cg0002699 R-ASA-1129245-4 AVESA.00001b.r3.2Cg0002699 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002699 R-ASA-1129245-4 AVESA.00001b.r3.2Cg0002699 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002699 R-ASA-1129245-4 AVESA.00001b.r3.2Cg0002699 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.2Cg0002700 R-ASA-1129245-10 AVESA.00001b.r3.2Cg0002700 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002700 R-ASA-1129245-10 AVESA.00001b.r3.2Cg0002700 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002700 R-ASA-1129245-10 AVESA.00001b.r3.2Cg0002700 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.2Cg0002713 R-ASA-2731026-4 AVESA.00001b.r3.2Cg0002713 [endoplasmic reticulum membrane] R-ASA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119557 GA12 biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002744 R-ASA-9826677 AVESA.00001b.r3.2Cg0002744 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.2Cg0002763 R-ASA-9026148-2 AVESA.00001b.r3.2Cg0002763 [mitochondrion] R-ASA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119458 Glutamate degradation none Avena sativa AVESA.00001b.r3.2Cg0002781 R-ASA-1124921 AVESA.00001b.r3.2Cg0002781 [cytosol] R-ASA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002784 R-ASA-1125584-4 AVESA.00001b.r3.2Cg0002784 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.2Cg0002787 R-ASA-1129564 AVESA.00001b.r3.2Cg0002787 [cytosol] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002787 R-ASA-9681913 AVESA.00001b.r3.2Cg0002787 [Golgi membrane] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.2Cg0002787 R-ASA-1129564 AVESA.00001b.r3.2Cg0002787 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.2Cg0002793 R-ASA-8879040 AVESA.00001b.r3.2Cg0002793 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.2Cg0002799 R-ASA-9618186-3 AVESA.00001b.r3.2Cg0002799 [plant-type vacuole membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.2Cg0002810 R-ASA-1127383-3 AVESA.00001b.r3.2Cg0002810 [cytosol] R-ASA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119596 Glutamate biosynthesis I none Avena sativa AVESA.00001b.r3.2Cg0002815 R-ASA-1127243-3 AVESA.00001b.r3.2Cg0002815 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002816 R-ASA-1250419-3 AVESA.00001b.r3.2Cg0002816 [cytosol] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0002816 R-ASA-1129637-3 AVESA.00001b.r3.2Cg0002816 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.2Cg0002884 R-ASA-6786926-4 AVESA.00001b.r3.2Cg0002884 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Cg0002936 R-ASA-1126860 AVESA.00001b.r3.2Cg0002936 [cytosol] R-ASA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119321 Glycerol degradation I none Avena sativa AVESA.00001b.r3.2Cg0002945 R-ASA-9920344-3 AVESA.00001b.r3.2Cg0002945 [nucleoplasm] R-ASA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934108 Short day regulated expression of florigens none Avena sativa AVESA.00001b.r3.2Cg0002963 R-ASA-5654750-5 AVESA.00001b.r3.2Cg0002963 [cytosol] R-ASA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119393 Asparagine degradation I none Avena sativa AVESA.00001b.r3.2Cg0002964 R-ASA-5654750-2 AVESA.00001b.r3.2Cg0002964 [cytosol] R-ASA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119393 Asparagine degradation I none Avena sativa AVESA.00001b.r3.2Cg0002965 R-ASA-5654750-4 AVESA.00001b.r3.2Cg0002965 [cytosol] R-ASA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119393 Asparagine degradation I none Avena sativa AVESA.00001b.r3.2Cg0002978 R-ASA-6787173-2 AVESA.00001b.r3.2Cg0002978 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Cg0002978 R-ASA-6786972-2 AVESA.00001b.r3.2Cg0002978 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Cg0003010 R-ASA-5632226 AVESA.00001b.r3.2Cg0003010 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.2Cg0003012 R-ASA-9681905-3 AVESA.00001b.r3.2Cg0003012 [Golgi membrane] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.2Cg0003025 R-ASA-2672431-2 AVESA.00001b.r3.2Cg0003025 [cytosol] R-ASA-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119322 Leucodelphinidin biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0003025 R-ASA-2672431-2 AVESA.00001b.r3.2Cg0003025 [cytosol] R-ASA-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0003025 R-ASA-1124195-2 AVESA.00001b.r3.2Cg0003025 [cytosol] R-ASA-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119531 Flavonoid biosynthesis none Avena sativa AVESA.00001b.r3.2Cg0003034 R-ASA-5608137 AVESA.00001b.r3.2Cg0003034 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.2Cg0003067 R-ASA-1123465-2 AVESA.00001b.r3.2Cg0003067 [plastid stroma] R-ASA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119424 Plastid glycolysis none Avena sativa AVESA.00001b.r3.2Cg0003067 R-ASA-5633368-2 AVESA.00001b.r3.2Cg0003067 [cytosol] R-ASA-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119601 Trehalose degradation II none Avena sativa AVESA.00001b.r3.2Cg0003088 R-ASA-1126636-6 AVESA.00001b.r3.2Cg0003088 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0000047 R-ASA-1128974 AVESA.00001b.r3.2Dg0000047 [cytosol] R-ASA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119287 Vitamin E biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0000047 R-ASA-1128974 AVESA.00001b.r3.2Dg0000047 [cytosol] R-ASA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119506 tyrosine degradation I none Avena sativa AVESA.00001b.r3.2Dg0000058 R-ASA-1122651 AVESA.00001b.r3.2Dg0000058 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0000069 R-ASA-9618126 AVESA.00001b.r3.2Dg0000069 [plasma membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.2Dg0000092 R-ASA-1124759-2 AVESA.00001b.r3.2Dg0000092 [endosome] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.2Dg0000092 R-ASA-5679306-2 AVESA.00001b.r3.2Dg0000092 [plasma membrane] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.2Dg0000177 R-ASA-1123867 AVESA.00001b.r3.2Dg0000177 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0000178 R-ASA-5149644-3 AVESA.00001b.r3.2Dg0000178 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.2Dg0000184 R-ASA-9826604-3 AVESA.00001b.r3.2Dg0000184 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.2Dg0000289 R-ASA-1130152 AVESA.00001b.r3.2Dg0000289 [cytosol] R-ASA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119394 Pantothenate and coenzyme A biosynthesis III none Avena sativa AVESA.00001b.r3.2Dg0000408 R-ASA-5633332-2 AVESA.00001b.r3.2Dg0000408 [plastid stroma] R-ASA-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5633340 Citrulline-nitric oxide cycle none Avena sativa AVESA.00001b.r3.2Dg0000437 R-ASA-1126888-3 AVESA.00001b.r3.2Dg0000437 [cytosol] R-ASA-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119360 Fructan biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0000443 R-ASA-1129029-2 AVESA.00001b.r3.2Dg0000443 [cytosol] R-ASA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119501 S-adenosyl-L-methionine cycle none Avena sativa AVESA.00001b.r3.2Dg0000446 R-ASA-1129029 AVESA.00001b.r3.2Dg0000446 [cytosol] R-ASA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119501 S-adenosyl-L-methionine cycle none Avena sativa AVESA.00001b.r3.2Dg0000470 R-ASA-1126373-2 AVESA.00001b.r3.2Dg0000470 [cytosol] R-ASA-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0000501 R-ASA-1128322 AVESA.00001b.r3.2Dg0000501 [cytosol] R-ASA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119384 NAD biosynthesis I (from aspartate) none Avena sativa AVESA.00001b.r3.2Dg0000602 R-ASA-8854445-2 AVESA.00001b.r3.2Dg0000602 [cytosol] R-ASA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119276 Choline biosynthesis III none Avena sativa AVESA.00001b.r3.2Dg0000614 R-ASA-3240748 AVESA.00001b.r3.2Dg0000614 [cytosol] R-ASA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Avena sativa AVESA.00001b.r3.2Dg0000659 R-ASA-9640697-3 phospho-AVESA.00001b.r3.2Dg0000659 [nucleoplasm] R-ASA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640760 G1 phase none Avena sativa AVESA.00001b.r3.2Dg0000659 R-ASA-9640660-3 AVESA.00001b.r3.2Dg0000659 [nucleoplasm] R-ASA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640760 G1 phase none Avena sativa AVESA.00001b.r3.2Dg0000659 R-ASA-9640697-3 phospho-AVESA.00001b.r3.2Dg0000659 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.2Dg0000675 R-ASA-1124939-2 AVESA.00001b.r3.2Dg0000675 [cytosol] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0000692 R-ASA-1124520 AVESA.00001b.r3.2Dg0000692 [cytosol] R-ASA-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119278 PRPP biosynthesis I none Avena sativa AVESA.00001b.r3.2Dg0000719 R-ASA-1130162-2 AVESA.00001b.r3.2Dg0000719 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0000721 R-ASA-9918273-3 AVESA.00001b.r3.2Dg0000721 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0000721 R-ASA-9626376-3 AVESA.00001b.r3.2Dg0000721 [plastid stroma] R-ASA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9626305 Regulatory network of nutrient accumulation none Avena sativa AVESA.00001b.r3.2Dg0000729 R-ASA-9645891 AVESA.00001b.r3.2Dg0000729 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.2Dg0000740 R-ASA-1122347-2 AVESA.00001b.r3.2Dg0000740 [cytosol] R-ASA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119384 NAD biosynthesis I (from aspartate) none Avena sativa AVESA.00001b.r3.2Dg0000823 R-ASA-1130281-2 AVESA.00001b.r3.2Dg0000823 [cytosol] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.2Dg0000829 R-ASA-1122881-2 AVESA.00001b.r3.2Dg0000829 [cytosol] R-ASA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0000829 R-ASA-1122881-2 AVESA.00001b.r3.2Dg0000829 [cytosol] R-ASA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119438 Secologanin and strictosidine biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0000829 R-ASA-1122881-2 AVESA.00001b.r3.2Dg0000829 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.2Dg0000848 R-ASA-6787224-2 AVESA.00001b.r3.2Dg0000848 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Dg0000848 R-ASA-6787146-2 AVESA.00001b.r3.2Dg0000848 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Dg0000871 R-ASA-9920292-2 AVESA.00001b.r3.2Dg0000871 [nucleoplasm] R-ASA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934108 Short day regulated expression of florigens none Avena sativa AVESA.00001b.r3.2Dg0000978 R-ASA-1127597-5 AVESA.00001b.r3.2Dg0000978 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.2Dg0000981 R-ASA-1128626 AVESA.00001b.r3.2Dg0000981 [cytosol] R-ASA-1119581 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119581 Thiosulfate disproportionation III (rhodanese) none Avena sativa AVESA.00001b.r3.2Dg0000992 R-ASA-1128974-3 AVESA.00001b.r3.2Dg0000992 [cytosol] R-ASA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119287 Vitamin E biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0000992 R-ASA-1128974-3 AVESA.00001b.r3.2Dg0000992 [cytosol] R-ASA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119506 tyrosine degradation I none Avena sativa AVESA.00001b.r3.2Dg0000998 R-ASA-4827041-3 AVESA.00001b.r3.2Dg0000998 [plastid stroma] R-ASA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-4827054 Tetrapyrrole biosynthesis I none Avena sativa AVESA.00001b.r3.2Dg0001003 R-ASA-5149657 AVESA.00001b.r3.2Dg0001003 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.2Dg0001003 R-ASA-1129239 AVESA.00001b.r3.2Dg0001003 [cytosol] R-ASA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119570 Cytosolic glycolysis none Avena sativa AVESA.00001b.r3.2Dg0001014 R-ASA-1125241-3 AVESA.00001b.r3.2Dg0001014 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.2Dg0001014 R-ASA-1125241-3 AVESA.00001b.r3.2Dg0001014 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.2Dg0001020 R-ASA-1125187-3 AVESA.00001b.r3.2Dg0001020 [cytosol] R-ASA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119276 Choline biosynthesis III none Avena sativa AVESA.00001b.r3.2Dg0001025 R-ASA-1129846-2 AVESA.00001b.r3.2Dg0001025 [mitochondrion] R-ASA-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119337 Proline degradation none Avena sativa AVESA.00001b.r3.2Dg0001025 R-ASA-1129846-2 AVESA.00001b.r3.2Dg0001025 [mitochondrion] R-ASA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119458 Glutamate degradation none Avena sativa AVESA.00001b.r3.2Dg0001057 R-ASA-1122463-6 AVESA.00001b.r3.2Dg0001057 [cytosol] R-ASA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119321 Glycerol degradation I none Avena sativa AVESA.00001b.r3.2Dg0001059 R-ASA-1122463-3 AVESA.00001b.r3.2Dg0001059 [cytosol] R-ASA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119321 Glycerol degradation I none Avena sativa AVESA.00001b.r3.2Dg0001082 R-ASA-1130344 AVESA.00001b.r3.2Dg0001082 [cytosol] R-ASA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119389 Phenylalanine biosynthesis I none Avena sativa AVESA.00001b.r3.2Dg0001085 R-ASA-6787130-3 AVESA.00001b.r3.2Dg0001085 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Dg0001085 R-ASA-6787130-3 AVESA.00001b.r3.2Dg0001085 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.2Dg0001102 R-ASA-1125090-3 AVESA.00001b.r3.2Dg0001102 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001122 R-ASA-1125967-2 AVESA.00001b.r3.2Dg0001122 [cytosol] R-ASA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119316 Phenylpropanoid biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001134 R-ASA-1122832-3 AVESA.00001b.r3.2Dg0001134 [plastid stroma] R-ASA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119449 Carotenoid biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001149 R-ASA-1129055 AVESA.00001b.r3.2Dg0001149 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.2Dg0001159 R-ASA-1129769-3 AVESA.00001b.r3.2Dg0001159 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001159 R-ASA-1129769-3 AVESA.00001b.r3.2Dg0001159 [cytosol] R-ASA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119618 13-LOX and 13-HPL pathway none Avena sativa AVESA.00001b.r3.2Dg0001160 R-ASA-1129769-5 AVESA.00001b.r3.2Dg0001160 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001160 R-ASA-1129769-5 AVESA.00001b.r3.2Dg0001160 [cytosol] R-ASA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119618 13-LOX and 13-HPL pathway none Avena sativa AVESA.00001b.r3.2Dg0001189 R-ASA-1128835 AVESA.00001b.r3.2Dg0001189 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001215 R-ASA-1127873-2 AVESA.00001b.r3.2Dg0001215 [plastid stroma] R-ASA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119424 Plastid glycolysis none Avena sativa AVESA.00001b.r3.2Dg0001215 R-ASA-1127873-2 AVESA.00001b.r3.2Dg0001215 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.2Dg0001232 R-ASA-5632200 AVESA.00001b.r3.2Dg0001232 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.2Dg0001244 R-ASA-1128637-2 AVESA.00001b.r3.2Dg0001244 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001248 R-ASA-1123551-2 AVESA.00001b.r3.2Dg0001248 [chloroplast] R-ASA-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119579 Glycine betaine biosynthesis III none Avena sativa AVESA.00001b.r3.2Dg0001258 R-ASA-1125533-5 AVESA.00001b.r3.2Dg0001258 [cytosol] R-ASA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119304 Putrescine biosynthesis II none Avena sativa AVESA.00001b.r3.2Dg0001259 R-ASA-1125533-2 AVESA.00001b.r3.2Dg0001259 [cytosol] R-ASA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119304 Putrescine biosynthesis II none Avena sativa AVESA.00001b.r3.2Dg0001307 R-ASA-1130141-2 AVESA.00001b.r3.2Dg0001307 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.2Dg0001307 R-ASA-1130141-2 AVESA.00001b.r3.2Dg0001307 [mitochondrial matrix] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001372 R-ASA-9675803-4 AVESA.00001b.r3.2Dg0001372 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.2Dg0001411 R-ASA-9675272-2 AVESA.00001b.r3.2Dg0001411 [plasma membrane] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.2Dg0001413 R-ASA-1123563-2 AVESA.00001b.r3.2Dg0001413 [cytosol] R-ASA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119379 Flavin biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001417 R-ASA-1122932-2 AVESA.00001b.r3.2Dg0001417 [cytosol] R-ASA-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119317 Spermine biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001417 R-ASA-1122932-2 AVESA.00001b.r3.2Dg0001417 [cytosol] R-ASA-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119343 Spermidine biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001417 R-ASA-1122932-2 AVESA.00001b.r3.2Dg0001417 [cytosol] R-ASA-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119446 Lysine degradation I none Avena sativa AVESA.00001b.r3.2Dg0001427 R-ASA-1125317-2 AVESA.00001b.r3.2Dg0001427 [cytosol] R-ASA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119316 Phenylpropanoid biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001434 R-ASA-5683299 AVESA.00001b.r3.2Dg0001434 [cytosol] R-ASA-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119451 Xylose degradation none Avena sativa AVESA.00001b.r3.2Dg0001509 R-ASA-1128298-3 AVESA.00001b.r3.2Dg0001509 [cytosol] R-ASA-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119271 Threonine degradation none Avena sativa AVESA.00001b.r3.2Dg0001509 R-ASA-1128298-3 AVESA.00001b.r3.2Dg0001509 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.2Dg0001521 R-ASA-1127614-20 AVESA.00001b.r3.2Dg0001521 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001521 R-ASA-1127614-20 AVESA.00001b.r3.2Dg0001521 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001521 R-ASA-1127614-20 AVESA.00001b.r3.2Dg0001521 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.2Dg0001522 R-ASA-1127614-21 AVESA.00001b.r3.2Dg0001522 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001522 R-ASA-1127614-21 AVESA.00001b.r3.2Dg0001522 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001522 R-ASA-1127614-21 AVESA.00001b.r3.2Dg0001522 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.2Dg0001524 R-ASA-1127614-14 AVESA.00001b.r3.2Dg0001524 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001524 R-ASA-1127614-14 AVESA.00001b.r3.2Dg0001524 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001524 R-ASA-1127614-14 AVESA.00001b.r3.2Dg0001524 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.2Dg0001525 R-ASA-1127614-5 AVESA.00001b.r3.2Dg0001525 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001525 R-ASA-1127614-5 AVESA.00001b.r3.2Dg0001525 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001525 R-ASA-1127614-5 AVESA.00001b.r3.2Dg0001525 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.2Dg0001526 R-ASA-1127614-16 AVESA.00001b.r3.2Dg0001526 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001526 R-ASA-1127614-16 AVESA.00001b.r3.2Dg0001526 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001526 R-ASA-1127614-16 AVESA.00001b.r3.2Dg0001526 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.2Dg0001536 R-ASA-2685732-4 AVESA.00001b.r3.2Dg0001536 [cytosol] R-ASA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119580 IAA biosynthesis II none Avena sativa AVESA.00001b.r3.2Dg0001537 R-ASA-2685732 AVESA.00001b.r3.2Dg0001537 [cytosol] R-ASA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119580 IAA biosynthesis II none Avena sativa AVESA.00001b.r3.2Dg0001571 R-ASA-9025541 AVESA.00001b.r3.2Dg0001571 [endoplasmic reticulum membrane] R-ASA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119325 Sphingolipid metabolism none Avena sativa AVESA.00001b.r3.2Dg0001630 R-ASA-9025791 AVESA.00001b.r3.2Dg0001630 [plasma membrane] R-ASA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025727 Iron uptake and transport in root vascular system none Avena sativa AVESA.00001b.r3.2Dg0001664 R-ASA-5138507-3 AVESA.00001b.r3.2Dg0001664 [plastid stroma] R-ASA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119263 Arginine biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001664 R-ASA-5138507-3 AVESA.00001b.r3.2Dg0001664 [plastid stroma] R-ASA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119539 Ornithine biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001664 R-ASA-5138507-3 AVESA.00001b.r3.2Dg0001664 [plastid stroma] R-ASA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119622 Arginine biosynthesis II (acetyl cycle) none Avena sativa AVESA.00001b.r3.2Dg0001665 R-ASA-5367777 AVESA.00001b.r3.2Dg0001665 [plastid stroma] R-ASA-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5367729 Strigolactone biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001680 R-ASA-1126615-2 AVESA.00001b.r3.2Dg0001680 [cytosol] R-ASA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119437 Glutathione redox reactions I none Avena sativa AVESA.00001b.r3.2Dg0001703 R-ASA-1129277 AVESA.00001b.r3.2Dg0001703 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.2Dg0001703 R-ASA-1129277 AVESA.00001b.r3.2Dg0001703 [cytosol] R-ASA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119496 Pantothenate biosynthesis I none Avena sativa AVESA.00001b.r3.2Dg0001703 R-ASA-1129277 AVESA.00001b.r3.2Dg0001703 [cytosol] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001703 R-ASA-1129277 AVESA.00001b.r3.2Dg0001703 [cytosol] R-ASA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119544 Pantothenate biosynthesis II none Avena sativa AVESA.00001b.r3.2Dg0001718 R-ASA-1128815-2 AVESA.00001b.r3.2Dg0001718 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.2Dg0001718 R-ASA-1128815-2 AVESA.00001b.r3.2Dg0001718 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001764 R-ASA-3899389-2 AVESA.00001b.r3.2Dg0001764 [plasma membrane] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.2Dg0001764 R-ASA-3899371-2 phospho-AVESA.00001b.r3.2Dg0001764 [plasma membrane] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.2Dg0001765 R-ASA-1126602-2 AVESA.00001b.r3.2Dg0001765 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.2Dg0001765 R-ASA-1126602-2 AVESA.00001b.r3.2Dg0001765 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.2Dg0001765 R-ASA-5606494-2 AVESA.00001b.r3.2Dg0001765 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.2Dg0001768 R-ASA-1125093-2 AVESA.00001b.r3.2Dg0001768 [cytosol] R-ASA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119456 Brassinosteroid biosynthesis II none Avena sativa AVESA.00001b.r3.2Dg0001782 R-ASA-1129892 AVESA.00001b.r3.2Dg0001782 [cytosol] R-ASA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119334 Ethylene biosynthesis from methionine none Avena sativa AVESA.00001b.r3.2Dg0001782 R-ASA-1129892 AVESA.00001b.r3.2Dg0001782 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.2Dg0001810 R-ASA-5221147-3 AVESA.00001b.r3.2Dg0001810 [cytosol] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.2Dg0001835 R-ASA-9675878 AVESA.00001b.r3.2Dg0001835 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.2Dg0001836 R-ASA-9640782-4 AVESA.00001b.r3.2Dg0001836 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.2Dg0001845 R-ASA-1125974-2 AVESA.00001b.r3.2Dg0001845 [cytosol] R-ASA-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119262 Threonine biosynthesis from homoserine none Avena sativa AVESA.00001b.r3.2Dg0001845 R-ASA-1125974-2 AVESA.00001b.r3.2Dg0001845 [cytosol] R-ASA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119400 Methionine biosynthesis II none Avena sativa AVESA.00001b.r3.2Dg0001938 R-ASA-1129245-2 AVESA.00001b.r3.2Dg0001938 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001938 R-ASA-1129245-2 AVESA.00001b.r3.2Dg0001938 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001938 R-ASA-1129245-2 AVESA.00001b.r3.2Dg0001938 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.2Dg0001939 R-ASA-1129245-5 AVESA.00001b.r3.2Dg0001939 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001939 R-ASA-1129245-5 AVESA.00001b.r3.2Dg0001939 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001939 R-ASA-1129245-5 AVESA.00001b.r3.2Dg0001939 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.2Dg0001951 R-ASA-2731026-3 AVESA.00001b.r3.2Dg0001951 [endoplasmic reticulum membrane] R-ASA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119557 GA12 biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001951 R-ASA-1130405-3 AVESA.00001b.r3.2Dg0001951 [endoplasmic reticulum membrane] R-ASA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119557 GA12 biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001952 R-ASA-2731026 AVESA.00001b.r3.2Dg0001952 [endoplasmic reticulum membrane] R-ASA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119557 GA12 biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001952 R-ASA-1130405 AVESA.00001b.r3.2Dg0001952 [endoplasmic reticulum membrane] R-ASA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119557 GA12 biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0001980 R-ASA-9826677-2 AVESA.00001b.r3.2Dg0001980 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.2Dg0001999 R-ASA-9026148 AVESA.00001b.r3.2Dg0001999 [mitochondrion] R-ASA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119458 Glutamate degradation none Avena sativa AVESA.00001b.r3.2Dg0002015 R-ASA-1125584 AVESA.00001b.r3.2Dg0002015 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.2Dg0002018 R-ASA-1129564-2 AVESA.00001b.r3.2Dg0002018 [cytosol] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0002018 R-ASA-9681913-2 AVESA.00001b.r3.2Dg0002018 [Golgi membrane] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.2Dg0002018 R-ASA-1129564-2 AVESA.00001b.r3.2Dg0002018 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.2Dg0002032 R-ASA-9618186 AVESA.00001b.r3.2Dg0002032 [plant-type vacuole membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.2Dg0002041 R-ASA-1127383-2 AVESA.00001b.r3.2Dg0002041 [cytosol] R-ASA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119596 Glutamate biosynthesis I none Avena sativa AVESA.00001b.r3.2Dg0002044 R-ASA-8987488-2 AVESA.00001b.r3.2Dg0002044 [mitochondrial matrix] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.2Dg0002048 R-ASA-1127243-2 AVESA.00001b.r3.2Dg0002048 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0002050 R-ASA-1250419-4 AVESA.00001b.r3.2Dg0002050 [cytosol] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0002050 R-ASA-1129637-4 AVESA.00001b.r3.2Dg0002050 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.2Dg0002134 R-ASA-1130308-2 AVESA.00001b.r3.2Dg0002134 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0002163 R-ASA-1126860-3 AVESA.00001b.r3.2Dg0002163 [cytosol] R-ASA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119321 Glycerol degradation I none Avena sativa AVESA.00001b.r3.2Dg0002167 R-ASA-9920344-2 AVESA.00001b.r3.2Dg0002167 [nucleoplasm] R-ASA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934108 Short day regulated expression of florigens none Avena sativa AVESA.00001b.r3.2Dg0002186 R-ASA-5654750 AVESA.00001b.r3.2Dg0002186 [cytosol] R-ASA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119393 Asparagine degradation I none Avena sativa AVESA.00001b.r3.2Dg0002200 R-ASA-6787173-3 AVESA.00001b.r3.2Dg0002200 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Dg0002200 R-ASA-6786972-3 AVESA.00001b.r3.2Dg0002200 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Dg0002235 R-ASA-9681905 AVESA.00001b.r3.2Dg0002235 [Golgi membrane] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.2Dg0002240 R-ASA-2672431-3 AVESA.00001b.r3.2Dg0002240 [cytosol] R-ASA-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119322 Leucodelphinidin biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0002240 R-ASA-2672431-3 AVESA.00001b.r3.2Dg0002240 [cytosol] R-ASA-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0002240 R-ASA-1124195-3 AVESA.00001b.r3.2Dg0002240 [cytosol] R-ASA-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119531 Flavonoid biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0002248 R-ASA-5608137-3 AVESA.00001b.r3.2Dg0002248 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.2Dg0002298 R-ASA-1126636-2 AVESA.00001b.r3.2Dg0002298 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0002356 R-ASA-1123534-5 AVESA.00001b.r3.2Dg0002356 [cytosol] R-ASA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119438 Secologanin and strictosidine biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0002374 R-ASA-1123819 AVESA.00001b.r3.2Dg0002374 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.2Dg0002436 R-ASA-1125237-3 AVESA.00001b.r3.2Dg0002436 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.2Dg0002477 R-ASA-9658656-2 AVESA.00001b.r3.2Dg0002477 [cytosol] R-ASA-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119271 Threonine degradation none Avena sativa AVESA.00001b.r3.2Dg0002477 R-ASA-9658656-2 AVESA.00001b.r3.2Dg0002477 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.2Dg0002477 R-ASA-9658656-2 AVESA.00001b.r3.2Dg0002477 [cytosol] R-ASA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119567 Beta-alanine biosynthesis I none Avena sativa AVESA.00001b.r3.2Dg0002520 R-ASA-1127076-8 AVESA.00001b.r3.2Dg0002520 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0002520 R-ASA-1127076-8 AVESA.00001b.r3.2Dg0002520 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.2Dg0002545 R-ASA-9025789 AVESA.00001b.r3.2Dg0002545 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0002596 R-ASA-1129816-2 AVESA.00001b.r3.2Dg0002596 [plastid stroma] R-ASA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119367 Polyisoprenoid biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0002596 R-ASA-1129816-2 AVESA.00001b.r3.2Dg0002596 [plastid stroma] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.2Dg0002629 R-ASA-1125494-4 AVESA.00001b.r3.2Dg0002629 [endoplasmic reticulum membrane] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.2Dg0002648 R-ASA-9918206-2 AVESA.00001b.r3.2Dg0002648 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0002702 R-ASA-9638996-2 AVESA.00001b.r3.2Dg0002702 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.2Dg0002723 R-ASA-9675357-2 AVESA.00001b.r3.2Dg0002723 [nucleoplasm] R-ASA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030680 Crown root development none Avena sativa AVESA.00001b.r3.2Dg0002751 R-ASA-5146760 AVESA.00001b.r3.2Dg0002751 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.2Dg0002788 R-ASA-1123575-2 AVESA.00001b.r3.2Dg0002788 [cytosol] R-ASA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119297 Beta-alanine biosynthesis III none Avena sativa AVESA.00001b.r3.2Dg0002806 R-ASA-1122433 AVESA.00001b.r3.2Dg0002806 [mitochondrial inner membrane] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.2Dg0002959 R-ASA-1125038 AVESA.00001b.r3.2Dg0002959 [plastid stroma] R-ASA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119449 Carotenoid biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0002987 R-ASA-9675274-3 AVESA.00001b.r3.2Dg0002987 [nucleoplasm] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.2Dg0003032 R-ASA-3321270-2 AVESA.00001b.r3.2Dg0003032 [chloroplast inner membrane] R-ASA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119287 Vitamin E biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0003049 R-ASA-1127705 AVESA.00001b.r3.2Dg0003049 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.2Dg0003057 R-ASA-1127089-3 AVESA.00001b.r3.2Dg0003057 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0003099 R-ASA-1126269-3 AVESA.00001b.r3.2Dg0003099 [mitochondrial matrix] R-ASA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119479 Valine degradation none Avena sativa AVESA.00001b.r3.2Dg0003103 R-ASA-4723663-3 AVESA.00001b.r3.2Dg0003103 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.2Dg0003103 R-ASA-1126491-3 AVESA.00001b.r3.2Dg0003103 [cytosol] R-ASA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119594 Pyridoxal 5'-phosphate biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0003103 R-ASA-1126491-3 AVESA.00001b.r3.2Dg0003103 [cytosol] R-ASA-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119629 Thiamine biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0003116 R-ASA-1128354-2 AVESA.00001b.r3.2Dg0003116 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0003142 R-ASA-1123860 AVESA.00001b.r3.2Dg0003142 [cytosol] R-ASA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119292 Cytokinins 7-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0003142 R-ASA-1123860 AVESA.00001b.r3.2Dg0003142 [cytosol] R-ASA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119375 Cytokinins 9-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0003142 R-ASA-1123860 AVESA.00001b.r3.2Dg0003142 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0003148 R-ASA-9611864 AVESA.00001b.r3.2Dg0003148 [mitochondrial matrix] R-ASA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119479 Valine degradation none Avena sativa AVESA.00001b.r3.2Dg0003217 R-ASA-1127467-2 AVESA.00001b.r3.2Dg0003217 [cytosol] R-ASA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119456 Brassinosteroid biosynthesis II none Avena sativa AVESA.00001b.r3.2Dg0003220 R-ASA-1127467-4 AVESA.00001b.r3.2Dg0003220 [cytosol] R-ASA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119456 Brassinosteroid biosynthesis II none Avena sativa AVESA.00001b.r3.2Dg0003240 R-ASA-5221149-2 AVESA.00001b.r3.2Dg0003240 [plastid] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0003241 R-ASA-9924360 AVESA.00001b.r3.2Dg0003241 [nucleoplasm] R-ASA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924451 Shoot (tiller) formation and regulation of tiller angle none Avena sativa AVESA.00001b.r3.2Dg0003244 R-ASA-8987473-3 AVESA.00001b.r3.2Dg0003244 [peroxisomal matrix] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.2Dg0003244 R-ASA-1122329-3 AVESA.00001b.r3.2Dg0003244 [cytosol] R-ASA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119596 Glutamate biosynthesis I none Avena sativa AVESA.00001b.r3.2Dg0003270 R-ASA-5632266 AVESA.00001b.r3.2Dg0003270 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.2Dg0003270 R-ASA-5632266 AVESA.00001b.r3.2Dg0003270 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.2Dg0003277 R-ASA-1125489-2 AVESA.00001b.r3.2Dg0003277 [Golgi membrane] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0003277 R-ASA-1125489-2 AVESA.00001b.r3.2Dg0003277 [Golgi membrane] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.2Dg0003277 R-ASA-1125489-2 AVESA.00001b.r3.2Dg0003277 [Golgi membrane] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.2Dg0003280 R-ASA-1129247-2 AVESA.00001b.r3.2Dg0003280 [mitochondrial inner membrane] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.2Dg0003299 R-ASA-9826652 OSH15 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.2Dg0003348 R-ASA-9675439-4 AVESA.00001b.r3.2Dg0003348 [mitochondrial matrix] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.2Dg0003357 R-ASA-8987548-3 AVESA.00001b.r3.2Dg0003357 [peroxisomal matrix] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.2Dg0003358 R-ASA-8934299 AVESA.00001b.r3.2Dg0003358 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.2Dg0003358 R-ASA-8934299 AVESA.00001b.r3.2Dg0003358 [nucleoplasm] R-ASA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934257 Transition from vegetative to reproductive shoot apical meristem none Avena sativa AVESA.00001b.r3.2Dg0003358 R-ASA-8934299 AVESA.00001b.r3.2Dg0003358 [nucleoplasm] R-ASA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609102 Flower development none Avena sativa AVESA.00001b.r3.2Dg0003395 R-ASA-9916124-2 OsPRX95 [extracellular region] R-ASA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119403 Removal of superoxide radicals none Avena sativa AVESA.00001b.r3.2Dg0003395 R-ASA-9916124-2 OsPRX95 [extracellular region] R-ASA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9607185 Generation of superoxide radicals none Avena sativa AVESA.00001b.r3.2Dg0003434 R-ASA-9826615-2 RERJ1 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.2Dg0003442 R-ASA-1126320-2 AVESA.00001b.r3.2Dg0003442 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.2Dg0003455 R-ASA-1122369 AVESA.00001b.r3.2Dg0003455 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0003457 R-ASA-1124866-2 AVESA.00001b.r3.2Dg0003457 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0003459 R-ASA-1124866-3 AVESA.00001b.r3.2Dg0003459 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0003505 R-ASA-9025712-2 AVESA.00001b.r3.2Dg0003505 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0003510 R-ASA-6787185-3 AVESA.00001b.r3.2Dg0003510 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Dg0003514 R-ASA-1128549 AVESA.00001b.r3.2Dg0003514 [cytosol] R-ASA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119449 Carotenoid biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0003538 R-ASA-9646043 AVESA.00001b.r3.2Dg0003538 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.2Dg0003538 R-ASA-9646043 AVESA.00001b.r3.2Dg0003538 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.2Dg0003538 R-ASA-9646043 AVESA.00001b.r3.2Dg0003538 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.2Dg0003538 R-ASA-9646043 AVESA.00001b.r3.2Dg0003538 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.2Dg0003538 R-ASA-9646043 AVESA.00001b.r3.2Dg0003538 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.2Dg0003564 R-ASA-5608203 AVESA.00001b.r3.2Dg0003564 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.2Dg0003564 R-ASA-5608203 AVESA.00001b.r3.2Dg0003564 [nucleoplasm] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.2Dg0003564 R-ASA-9658968 AVESA.00001b.r3.2Dg0003564 [cytosol] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.2Dg0003567 R-ASA-6787123-3 AVESA.00001b.r3.2Dg0003567 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Dg0003567 R-ASA-6786942-3 AVESA.00001b.r3.2Dg0003567 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.2Dg0003577 R-ASA-9930242 AVESA.00001b.r3.2Dg0003577 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.2Dg0003613 R-ASA-1122707 AVESA.00001b.r3.2Dg0003613 [cytosol] R-ASA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119389 Phenylalanine biosynthesis I none Avena sativa AVESA.00001b.r3.2Dg0003614 R-ASA-1128989-3 AVESA.00001b.r3.2Dg0003614 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.2Dg0003637 R-ASA-1124977-2 AVESA.00001b.r3.2Dg0003637 [cytosol] R-ASA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119586 Cyanate degradation none Avena sativa AVESA.00001b.r3.2Dg0003776 R-ASA-1124401 AVESA.00001b.r3.2Dg0003776 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.2Dg0003805 R-ASA-1124087 AVESA.00001b.r3.2Dg0003805 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.2Dg0003805 R-ASA-1124087 AVESA.00001b.r3.2Dg0003805 [cytosol] R-ASA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119618 13-LOX and 13-HPL pathway none Avena sativa AVESA.00001b.r3.2Dg0003811 R-ASA-4754219 AVESA.00001b.r3.2Dg0003811 [plastid stroma] R-ASA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119449 Carotenoid biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0000012 R-ASA-1127382-3 AVESA.00001b.r3.3Ag0000012 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.3Ag0000012 R-ASA-1127382-3 AVESA.00001b.r3.3Ag0000012 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0000055 R-ASA-1125877-3 AVESA.00001b.r3.3Ag0000055 [cytosol] R-ASA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119456 Brassinosteroid biosynthesis II none Avena sativa AVESA.00001b.r3.3Ag0000100 R-ASA-9916305 AVESA.00001b.r3.3Ag0000100 [nucleoplasm] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.3Ag0000113 R-ASA-9826681-2 EREBP129 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.3Ag0000129 R-ASA-1127076-4 AVESA.00001b.r3.3Ag0000129 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0000129 R-ASA-1127076-4 AVESA.00001b.r3.3Ag0000129 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.3Ag0000182 R-ASA-9609569-5 AVESA.00001b.r3.3Ag0000182 [cytosol] R-ASA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609573 Tricin biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0000217 R-ASA-9916160 AVESA.00001b.r3.3Ag0000217 [nucleoplasm] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.3Ag0000228 R-ASA-1124598 AVESA.00001b.r3.3Ag0000228 [cytosol] R-ASA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119300 Glycolipid desaturation none Avena sativa AVESA.00001b.r3.3Ag0000245 R-ASA-5149676 AVESA.00001b.r3.3Ag0000245 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.3Ag0000333 R-ASA-1125612-2 AVESA.00001b.r3.3Ag0000333 [cytosol] R-ASA-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119353 Linear furanocoumarin biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0000353 R-ASA-1124270-4 AVESA.00001b.r3.3Ag0000353 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.3Ag0000354 R-ASA-1124270-3 AVESA.00001b.r3.3Ag0000354 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.3Ag0000366 R-ASA-1123561-4 AVESA.00001b.r3.3Ag0000366 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.3Ag0000389 R-ASA-1122545 AVESA.00001b.r3.3Ag0000389 [cytosol] R-ASA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119331 Cysteine biosynthesis I none Avena sativa AVESA.00001b.r3.3Ag0000390 R-ASA-1125340-2 AVESA.00001b.r3.3Ag0000390 [plastid stroma] R-ASA-1119274 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119274 Monoterpene biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0000390 R-ASA-1125340-2 AVESA.00001b.r3.3Ag0000390 [plastid stroma] R-ASA-1119593 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119593 Oleoresin monoterpene volatiles biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0000399 R-ASA-1126916 AVESA.00001b.r3.3Ag0000399 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.3Ag0000461 R-ASA-9826661 AVESA.00001b.r3.3Ag0000461 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.3Ag0000466 R-ASA-1124944 AVESA.00001b.r3.3Ag0000466 [plastid stroma] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.3Ag0000466 R-ASA-1124944 AVESA.00001b.r3.3Ag0000466 [plastid stroma] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.3Ag0000466 R-ASA-1124944 AVESA.00001b.r3.3Ag0000466 [plastid stroma] R-ASA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119502 Allantoin degradation none Avena sativa AVESA.00001b.r3.3Ag0000466 R-ASA-1124944 AVESA.00001b.r3.3Ag0000466 [plastid stroma] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0000481 R-ASA-6788042-2 AVESA.00001b.r3.3Ag0000481 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.3Ag0000482 R-ASA-9930201 DREB2A [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.3Ag0000523 R-ASA-1125521-2 AVESA.00001b.r3.3Ag0000523 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.3Ag0000525 R-ASA-1127752-5 AVESA.00001b.r3.3Ag0000525 [cytosol] R-ASA-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119417 Stachyose biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0000568 R-ASA-1128678 AVESA.00001b.r3.3Ag0000568 [cytosol] R-ASA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119292 Cytokinins 7-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0000568 R-ASA-1128678 AVESA.00001b.r3.3Ag0000568 [cytosol] R-ASA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119375 Cytokinins 9-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0000568 R-ASA-1128678 AVESA.00001b.r3.3Ag0000568 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0000569 R-ASA-1128678-8 AVESA.00001b.r3.3Ag0000569 [cytosol] R-ASA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119292 Cytokinins 7-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0000569 R-ASA-1128678-8 AVESA.00001b.r3.3Ag0000569 [cytosol] R-ASA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119375 Cytokinins 9-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0000569 R-ASA-1128678-8 AVESA.00001b.r3.3Ag0000569 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0000618 R-ASA-8933813 AVESA.00001b.r3.3Ag0000618 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.3Ag0000618 R-ASA-8933813 AVESA.00001b.r3.3Ag0000618 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.3Ag0000618 R-ASA-8933813 AVESA.00001b.r3.3Ag0000618 [nucleoplasm] R-ASA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924451 Shoot (tiller) formation and regulation of tiller angle none Avena sativa AVESA.00001b.r3.3Ag0000618 R-ASA-8933813 AVESA.00001b.r3.3Ag0000618 [nucleoplasm] R-ASA-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928946 Drought escape (DE) via ABA-independent pathway none Avena sativa AVESA.00001b.r3.3Ag0000670 R-ASA-1124096-3 AVESA.00001b.r3.3Ag0000670 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.3Ag0000671 R-ASA-1126395-2 AVESA.00001b.r3.3Ag0000671 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.3Ag0000681 R-ASA-1129411 AVESA.00001b.r3.3Ag0000681 [cytosol] R-ASA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119496 Pantothenate biosynthesis I none Avena sativa AVESA.00001b.r3.3Ag0000681 R-ASA-1129411 AVESA.00001b.r3.3Ag0000681 [cytosol] R-ASA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119544 Pantothenate biosynthesis II none Avena sativa AVESA.00001b.r3.3Ag0000709 R-ASA-6787202 AVESA.00001b.r3.3Ag0000709 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.3Ag0000779 R-ASA-5632139-2 AVESA.00001b.r3.3Ag0000779 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.3Ag0000788 R-ASA-5632315-2 AVESA.00001b.r3.3Ag0000788 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.3Ag0000788 R-ASA-5632284-2 phospho-AVESA.00001b.r3.3Ag0000788 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.3Ag0000788 R-ASA-5632277-2 phospho-AVESA.00001b.r3.3Ag0000788 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.3Ag0000788 R-ASA-5632315-2 AVESA.00001b.r3.3Ag0000788 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.3Ag0000805 R-ASA-1125698-2 AVESA.00001b.r3.3Ag0000805 [cytosol] R-ASA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119436 Peptidoglycan biosynthesis I none Avena sativa AVESA.00001b.r3.3Ag0000836 R-ASA-5679376 AVESA.00001b.r3.3Ag0000836 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.3Ag0000838 R-ASA-6788127 AVESA.00001b.r3.3Ag0000838 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.3Ag0000838 R-ASA-6788179 AVESA.00001b.r3.3Ag0000838 [cytosol] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.3Ag0000848 R-ASA-1125060 AVESA.00001b.r3.3Ag0000848 [cytosol] R-ASA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119334 Ethylene biosynthesis from methionine none Avena sativa AVESA.00001b.r3.3Ag0000848 R-ASA-1125060 AVESA.00001b.r3.3Ag0000848 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.3Ag0000851 R-ASA-9916314-3 OsDOS [nucleoplasm] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.3Ag0000861 R-ASA-1125058 AVESA.00001b.r3.3Ag0000861 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.3Ag0000867 R-ASA-1122541-2 AVESA.00001b.r3.3Ag0000867 [cytosol] R-ASA-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Avena sativa AVESA.00001b.r3.3Ag0000867 R-ASA-1122541-2 AVESA.00001b.r3.3Ag0000867 [cytosol] R-ASA-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Avena sativa AVESA.00001b.r3.3Ag0000881 R-ASA-1126435-3 AVESA.00001b.r3.3Ag0000881 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.3Ag0000908 R-ASA-6787066-3 AVESA.00001b.r3.3Ag0000908 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.3Ag0000911 R-ASA-9675365-3 AVESA.00001b.r3.3Ag0000911 [nucleoplasm] R-ASA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675508 Root elongation none Avena sativa AVESA.00001b.r3.3Ag0000933 R-ASA-5679436 AVESA.00001b.r3.3Ag0000933 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.3Ag0000958 R-ASA-6787229 AVESA.00001b.r3.3Ag0000958 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.3Ag0000958 R-ASA-9826659 AVESA.00001b.r3.3Ag0000958 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.3Ag0000983 R-ASA-9675273 AVESA.00001b.r3.3Ag0000983 [nucleoplasm] R-ASA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030557 Lateral root initiation none Avena sativa AVESA.00001b.r3.3Ag0000987 R-ASA-9025329-2 AVESA.00001b.r3.3Ag0000987 [chloroplast stroma] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.3Ag0000987 R-ASA-1125388-2 AVESA.00001b.r3.3Ag0000987 [cytosol] R-ASA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119496 Pantothenate biosynthesis I none Avena sativa AVESA.00001b.r3.3Ag0000987 R-ASA-1125388-2 AVESA.00001b.r3.3Ag0000987 [cytosol] R-ASA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119544 Pantothenate biosynthesis II none Avena sativa AVESA.00001b.r3.3Ag0000991 R-ASA-5632301-3 AVESA.00001b.r3.3Ag0000991 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.3Ag0000991 R-ASA-5632301-3 AVESA.00001b.r3.3Ag0000991 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.3Ag0000991 R-ASA-5632301-3 AVESA.00001b.r3.3Ag0000991 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.3Ag0001048 R-ASA-4788601-3 AVESA.00001b.r3.3Ag0001048 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.3Ag0001111 R-ASA-1123596-2 AVESA.00001b.r3.3Ag0001111 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.3Ag0001166 R-ASA-9612380 AVESA.00001b.r3.3Ag0001166 [cytosol] R-ASA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119612 Cysteine degradation none Avena sativa AVESA.00001b.r3.3Ag0001169 R-ASA-8933777-3 AVESA.00001b.r3.3Ag0001169 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.3Ag0001169 R-ASA-9924457-3 PIL15 [nucleoplasm] R-ASA-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924494 Gravity sensing and statolith sedimentation none Avena sativa AVESA.00001b.r3.3Ag0001196 R-ASA-1125615-3 AVESA.00001b.r3.3Ag0001196 [cytosol] R-ASA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119334 Ethylene biosynthesis from methionine none Avena sativa AVESA.00001b.r3.3Ag0001196 R-ASA-1125615-3 AVESA.00001b.r3.3Ag0001196 [cytosol] R-ASA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119501 S-adenosyl-L-methionine cycle none Avena sativa AVESA.00001b.r3.3Ag0001196 R-ASA-1125615-3 AVESA.00001b.r3.3Ag0001196 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.3Ag0001222 R-ASA-1127695-2 AVESA.00001b.r3.3Ag0001222 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0001224 R-ASA-2685730-8 AVESA.00001b.r3.3Ag0001224 [cytosol] R-ASA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119580 IAA biosynthesis II none Avena sativa AVESA.00001b.r3.3Ag0001245 R-ASA-1126625 AVESA.00001b.r3.3Ag0001245 [cytosol] R-ASA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119334 Ethylene biosynthesis from methionine none Avena sativa AVESA.00001b.r3.3Ag0001245 R-ASA-1126625 AVESA.00001b.r3.3Ag0001245 [cytosol] R-ASA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119501 S-adenosyl-L-methionine cycle none Avena sativa AVESA.00001b.r3.3Ag0001245 R-ASA-1126625 AVESA.00001b.r3.3Ag0001245 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.3Ag0001245 R-ASA-9025797 AVESA.00001b.r3.3Ag0001245 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0001274 R-ASA-9607132-4 RBOHB [plasma membrane] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.3Ag0001274 R-ASA-9611529-4 phospho-phosphorylated-RBOHB [plasma membrane] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.3Ag0001279 R-ASA-8986605 AVESA.00001b.r3.3Ag0001279 [mitochondrial matrix] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.3Ag0001279 R-ASA-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-ASA-1119351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119351 Mitochondrial pyruvate metabolism none Avena sativa AVESA.00001b.r3.3Ag0001279 R-ASA-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.3Ag0001349 R-ASA-9640761-3 AVESA.00001b.r3.3Ag0001349 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.3Ag0001349 R-ASA-9640761-3 AVESA.00001b.r3.3Ag0001349 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.3Ag0001349 R-ASA-9640761-3 AVESA.00001b.r3.3Ag0001349 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.3Ag0001459 R-ASA-9608693-2 AVESA.00001b.r3.3Ag0001459 [cytosol] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.3Ag0001588 R-ASA-9684771-6 AVESA.00001b.r3.3Ag0001588 [cytosol] R-ASA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609102 Flower development none Avena sativa AVESA.00001b.r3.3Ag0001618 R-ASA-9684771-2 AVESA.00001b.r3.3Ag0001618 [cytosol] R-ASA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609102 Flower development none Avena sativa AVESA.00001b.r3.3Ag0001671 R-ASA-1125570 AVESA.00001b.r3.3Ag0001671 [cytosol] R-ASA-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119450 Homocysteine biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0001684 R-ASA-1130327 AVESA.00001b.r3.3Ag0001684 [cytosol] R-ASA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119586 Cyanate degradation none Avena sativa AVESA.00001b.r3.3Ag0001720 R-ASA-1128071-2 AVESA.00001b.r3.3Ag0001720 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.3Ag0001736 R-ASA-1122727 AVESA.00001b.r3.3Ag0001736 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.3Ag0001736 R-ASA-1122727 AVESA.00001b.r3.3Ag0001736 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0001780 R-ASA-4752547-2 AVESA.00001b.r3.3Ag0001780 [plastid stroma] R-ASA-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119498 Phylloquinone biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0001803 R-ASA-9612372-2 AVESA.00001b.r3.3Ag0001803 [mitochondrial matrix] R-ASA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119612 Cysteine degradation none Avena sativa AVESA.00001b.r3.3Ag0001816 R-ASA-5608132-3 AVESA.00001b.r3.3Ag0001816 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.3Ag0001846 R-ASA-1124692-2 AVESA.00001b.r3.3Ag0001846 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.3Ag0001870 R-ASA-1129859-2 AVESA.00001b.r3.3Ag0001870 [chloroplast stroma] R-ASA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119443 Ammonia assimilation cycle none Avena sativa AVESA.00001b.r3.3Ag0001870 R-ASA-5606382-2 AVESA.00001b.r3.3Ag0001870 [plastid stroma] R-ASA-1119535 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119535 Glutamate biosynthesis IV none Avena sativa AVESA.00001b.r3.3Ag0001873 R-ASA-8987467 AVESA.00001b.r3.3Ag0001873 [chloroplast] R-ASA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119502 Allantoin degradation none Avena sativa AVESA.00001b.r3.3Ag0001878 R-ASA-9640785-3 AVESA.00001b.r3.3Ag0001878 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.3Ag0001878 R-ASA-9640785-3 AVESA.00001b.r3.3Ag0001878 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.3Ag0001903 R-ASA-5632121 AVESA.00001b.r3.3Ag0001903 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.3Ag0001916 R-ASA-1130059 AVESA.00001b.r3.3Ag0001916 [cytosol] R-ASA-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119262 Threonine biosynthesis from homoserine none Avena sativa AVESA.00001b.r3.3Ag0001959 R-ASA-1130006-3 AVESA.00001b.r3.3Ag0001959 [plastid stroma] R-ASA-1119569 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119569 Kievitone biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0001967 R-ASA-6787238-2 AVESA.00001b.r3.3Ag0001967 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.3Ag0001987 R-ASA-9658664 AVESA.00001b.r3.3Ag0001987 [plasma membrane] R-ASA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119567 Beta-alanine biosynthesis I none Avena sativa AVESA.00001b.r3.3Ag0001991 R-ASA-8987557 AVESA.00001b.r3.3Ag0001991 [mitochondrial matrix] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.3Ag0002010 R-ASA-1129466-2 AVESA.00001b.r3.3Ag0002010 [cytosol] R-ASA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119449 Carotenoid biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0002039 R-ASA-1127753-2 AVESA.00001b.r3.3Ag0002039 [cytosol] R-ASA-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119278 PRPP biosynthesis I none Avena sativa AVESA.00001b.r3.3Ag0002071 R-ASA-1126095-3 AVESA.00001b.r3.3Ag0002071 [cytosol] R-ASA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119389 Phenylalanine biosynthesis I none Avena sativa AVESA.00001b.r3.3Ag0002094 R-ASA-1125734-2 AVESA.00001b.r3.3Ag0002094 [cytosol] R-ASA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119281 Aspartate biosynthesis I none Avena sativa AVESA.00001b.r3.3Ag0002094 R-ASA-5632000-2 AVESA.00001b.r3.3Ag0002094 [plastid stroma] R-ASA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119553 Asparagine biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0002101 R-ASA-1123745-4 AVESA.00001b.r3.3Ag0002101 [endoplasmic reticulum membrane] R-ASA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119260 Cardiolipin biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0002101 R-ASA-1123745-4 AVESA.00001b.r3.3Ag0002101 [endoplasmic reticulum membrane] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.3Ag0002126 R-ASA-5608212-2 AVESA.00001b.r3.3Ag0002126 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.3Ag0002126 R-ASA-5608212-2 AVESA.00001b.r3.3Ag0002126 [nucleoplasm] R-ASA-9675304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675304 Lateral root emergence none Avena sativa AVESA.00001b.r3.3Ag0002131 R-ASA-1124083 AVESA.00001b.r3.3Ag0002131 [cytosol] R-ASA-1119323 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119323 Lipid-A-precursor biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0002149 R-ASA-1124491-2 AVESA.00001b.r3.3Ag0002149 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0002151 R-ASA-6788120-3 AVESA.00001b.r3.3Ag0002151 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.3Ag0002151 R-ASA-6788120-3 AVESA.00001b.r3.3Ag0002151 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.3Ag0002171 R-ASA-5367761-2 AVESA.00001b.r3.3Ag0002171 [plastid stroma] R-ASA-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5367729 Strigolactone biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0002190 R-ASA-1126981-3 AVESA.00001b.r3.3Ag0002190 [nucleoplasm] R-ASA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030680 Crown root development none Avena sativa AVESA.00001b.r3.3Ag0002206 R-ASA-1127614-19 AVESA.00001b.r3.3Ag0002206 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0002206 R-ASA-1127614-19 AVESA.00001b.r3.3Ag0002206 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0002206 R-ASA-1127614-19 AVESA.00001b.r3.3Ag0002206 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.3Ag0002208 R-ASA-1127614-12 AVESA.00001b.r3.3Ag0002208 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0002208 R-ASA-1127614-12 AVESA.00001b.r3.3Ag0002208 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.3Ag0002208 R-ASA-1127614-12 AVESA.00001b.r3.3Ag0002208 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.3Ag0002212 R-ASA-1127292-3 AVESA.00001b.r3.3Ag0002212 [plastid stroma] R-ASA-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Avena sativa AVESA.00001b.r3.3Ag0002223 R-ASA-9607105 AVESA.00001b.r3.3Ag0002223 [mitochondrion] R-ASA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9607185 Generation of superoxide radicals none Avena sativa AVESA.00001b.r3.3Ag0002239 R-ASA-6788026 AVESA.00001b.r3.3Ag0002239 [cytosol] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.3Ag0002262 R-ASA-9639874-2 AVESA.00001b.r3.3Ag0002262 [plasma membrane] R-ASA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639861 Development of root hair none Avena sativa AVESA.00001b.r3.3Ag0002279 R-ASA-9916309-3 CPK3 [plasma membrane] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.3Cg0000012 R-ASA-1125877 AVESA.00001b.r3.3Cg0000012 [cytosol] R-ASA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119456 Brassinosteroid biosynthesis II none Avena sativa AVESA.00001b.r3.3Cg0000067 R-ASA-9826681 EREBP129 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.3Cg0000083 R-ASA-1127076-5 AVESA.00001b.r3.3Cg0000083 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0000083 R-ASA-1127076-5 AVESA.00001b.r3.3Cg0000083 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.3Cg0000150 R-ASA-1126531 AVESA.00001b.r3.3Cg0000150 [cytosol] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0000150 R-ASA-1126531 AVESA.00001b.r3.3Cg0000150 [cytosol] R-ASA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119628 GDP-mannose metabolism none Avena sativa AVESA.00001b.r3.3Cg0000167 R-ASA-9916160-2 AVESA.00001b.r3.3Cg0000167 [nucleoplasm] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.3Cg0000169 R-ASA-9916305-2 AVESA.00001b.r3.3Cg0000169 [nucleoplasm] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.3Cg0000222 R-ASA-5149676-2 AVESA.00001b.r3.3Cg0000222 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.3Cg0000268 R-ASA-1125612-5 AVESA.00001b.r3.3Cg0000268 [cytosol] R-ASA-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119353 Linear furanocoumarin biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0000289 R-ASA-1124270 AVESA.00001b.r3.3Cg0000289 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.3Cg0000310 R-ASA-1123561-3 AVESA.00001b.r3.3Cg0000310 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.3Cg0000332 R-ASA-1122545-2 AVESA.00001b.r3.3Cg0000332 [cytosol] R-ASA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119331 Cysteine biosynthesis I none Avena sativa AVESA.00001b.r3.3Cg0000333 R-ASA-1125340 AVESA.00001b.r3.3Cg0000333 [plastid stroma] R-ASA-1119274 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119274 Monoterpene biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0000333 R-ASA-1125340 AVESA.00001b.r3.3Cg0000333 [plastid stroma] R-ASA-1119593 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119593 Oleoresin monoterpene volatiles biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0000338 R-ASA-1126916-2 AVESA.00001b.r3.3Cg0000338 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.3Cg0000402 R-ASA-9826661-2 AVESA.00001b.r3.3Cg0000402 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.3Cg0000413 R-ASA-6788042 AVESA.00001b.r3.3Cg0000413 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.3Cg0000414 R-ASA-9930201-2 DREB2A [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.3Cg0000462 R-ASA-1125521-3 AVESA.00001b.r3.3Cg0000462 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.3Cg0000464 R-ASA-1127752-4 AVESA.00001b.r3.3Cg0000464 [cytosol] R-ASA-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119417 Stachyose biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0000517 R-ASA-1128678-6 AVESA.00001b.r3.3Cg0000517 [cytosol] R-ASA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119292 Cytokinins 7-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0000517 R-ASA-1128678-6 AVESA.00001b.r3.3Cg0000517 [cytosol] R-ASA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119375 Cytokinins 9-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0000517 R-ASA-1128678-6 AVESA.00001b.r3.3Cg0000517 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0000519 R-ASA-1128678-5 AVESA.00001b.r3.3Cg0000519 [cytosol] R-ASA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119292 Cytokinins 7-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0000519 R-ASA-1128678-5 AVESA.00001b.r3.3Cg0000519 [cytosol] R-ASA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119375 Cytokinins 9-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0000519 R-ASA-1128678-5 AVESA.00001b.r3.3Cg0000519 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0000573 R-ASA-8933813-2 AVESA.00001b.r3.3Cg0000573 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.3Cg0000573 R-ASA-8933813-2 AVESA.00001b.r3.3Cg0000573 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.3Cg0000573 R-ASA-8933813-2 AVESA.00001b.r3.3Cg0000573 [nucleoplasm] R-ASA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924451 Shoot (tiller) formation and regulation of tiller angle none Avena sativa AVESA.00001b.r3.3Cg0000573 R-ASA-8933813-2 AVESA.00001b.r3.3Cg0000573 [nucleoplasm] R-ASA-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928946 Drought escape (DE) via ABA-independent pathway none Avena sativa AVESA.00001b.r3.3Cg0000626 R-ASA-1124096-2 AVESA.00001b.r3.3Cg0000626 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.3Cg0000628 R-ASA-1126395-3 AVESA.00001b.r3.3Cg0000628 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.3Cg0000640 R-ASA-1129411-2 AVESA.00001b.r3.3Cg0000640 [cytosol] R-ASA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119496 Pantothenate biosynthesis I none Avena sativa AVESA.00001b.r3.3Cg0000640 R-ASA-1129411-2 AVESA.00001b.r3.3Cg0000640 [cytosol] R-ASA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119544 Pantothenate biosynthesis II none Avena sativa AVESA.00001b.r3.3Cg0000670 R-ASA-6787202-3 AVESA.00001b.r3.3Cg0000670 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.3Cg0000752 R-ASA-5632139-3 AVESA.00001b.r3.3Cg0000752 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.3Cg0000764 R-ASA-5632315 AVESA.00001b.r3.3Cg0000764 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.3Cg0000764 R-ASA-5632284 phospho-AVESA.00001b.r3.3Cg0000764 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.3Cg0000764 R-ASA-5632277 phospho-AVESA.00001b.r3.3Cg0000764 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.3Cg0000764 R-ASA-5632315 AVESA.00001b.r3.3Cg0000764 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.3Cg0000782 R-ASA-1125698 AVESA.00001b.r3.3Cg0000782 [cytosol] R-ASA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119436 Peptidoglycan biosynthesis I none Avena sativa AVESA.00001b.r3.3Cg0000789 R-ASA-1122727-2 AVESA.00001b.r3.3Cg0000789 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.3Cg0000789 R-ASA-1122727-2 AVESA.00001b.r3.3Cg0000789 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0000801 R-ASA-1128071-3 AVESA.00001b.r3.3Cg0000801 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.3Cg0000843 R-ASA-1125570-3 AVESA.00001b.r3.3Cg0000843 [cytosol] R-ASA-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119450 Homocysteine biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0000877 R-ASA-5632188 AVESA.00001b.r3.3Cg0000877 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.3Cg0000924 R-ASA-9684771 AVESA.00001b.r3.3Cg0000924 [cytosol] R-ASA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609102 Flower development none Avena sativa AVESA.00001b.r3.3Cg0001101 R-ASA-9608693 AVESA.00001b.r3.3Cg0001101 [cytosol] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.3Cg0001182 R-ASA-9640761 AVESA.00001b.r3.3Cg0001182 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.3Cg0001182 R-ASA-9640761 AVESA.00001b.r3.3Cg0001182 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.3Cg0001182 R-ASA-9640761 AVESA.00001b.r3.3Cg0001182 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.3Cg0001318 R-ASA-9607132 RBOHB [plasma membrane] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.3Cg0001318 R-ASA-9611529 phospho-phosphorylated-RBOHB [plasma membrane] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.3Cg0001463 R-ASA-1127695-3 AVESA.00001b.r3.3Cg0001463 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0001493 R-ASA-5679401 AVESA.00001b.r3.3Cg0001493 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.3Cg0001524 R-ASA-8933777 AVESA.00001b.r3.3Cg0001524 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.3Cg0001524 R-ASA-9924457 PIL15 [nucleoplasm] R-ASA-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924494 Gravity sensing and statolith sedimentation none Avena sativa AVESA.00001b.r3.3Cg0001528 R-ASA-1126625-2 AVESA.00001b.r3.3Cg0001528 [cytosol] R-ASA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119334 Ethylene biosynthesis from methionine none Avena sativa AVESA.00001b.r3.3Cg0001528 R-ASA-1126625-2 AVESA.00001b.r3.3Cg0001528 [cytosol] R-ASA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119501 S-adenosyl-L-methionine cycle none Avena sativa AVESA.00001b.r3.3Cg0001528 R-ASA-1126625-2 AVESA.00001b.r3.3Cg0001528 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.3Cg0001528 R-ASA-9025797-2 AVESA.00001b.r3.3Cg0001528 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0001585 R-ASA-1125615 AVESA.00001b.r3.3Cg0001585 [cytosol] R-ASA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119334 Ethylene biosynthesis from methionine none Avena sativa AVESA.00001b.r3.3Cg0001585 R-ASA-1125615 AVESA.00001b.r3.3Cg0001585 [cytosol] R-ASA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119501 S-adenosyl-L-methionine cycle none Avena sativa AVESA.00001b.r3.3Cg0001585 R-ASA-1125615 AVESA.00001b.r3.3Cg0001585 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.3Cg0001620 R-ASA-9612380-3 AVESA.00001b.r3.3Cg0001620 [cytosol] R-ASA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119612 Cysteine degradation none Avena sativa AVESA.00001b.r3.3Cg0001670 R-ASA-1123596 AVESA.00001b.r3.3Cg0001670 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.3Cg0001733 R-ASA-4788601-2 AVESA.00001b.r3.3Cg0001733 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.3Cg0001779 R-ASA-5632301-2 AVESA.00001b.r3.3Cg0001779 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.3Cg0001779 R-ASA-5632301-2 AVESA.00001b.r3.3Cg0001779 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.3Cg0001779 R-ASA-5632301-2 AVESA.00001b.r3.3Cg0001779 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.3Cg0001789 R-ASA-9675273-3 AVESA.00001b.r3.3Cg0001789 [nucleoplasm] R-ASA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030557 Lateral root initiation none Avena sativa AVESA.00001b.r3.3Cg0001811 R-ASA-6787229-2 AVESA.00001b.r3.3Cg0001811 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.3Cg0001811 R-ASA-9826659-2 AVESA.00001b.r3.3Cg0001811 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.3Cg0001836 R-ASA-5679436-2 AVESA.00001b.r3.3Cg0001836 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.3Cg0001862 R-ASA-9675365 AVESA.00001b.r3.3Cg0001862 [nucleoplasm] R-ASA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675508 Root elongation none Avena sativa AVESA.00001b.r3.3Cg0001867 R-ASA-6787066-2 AVESA.00001b.r3.3Cg0001867 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.3Cg0001898 R-ASA-1126435 AVESA.00001b.r3.3Cg0001898 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.3Cg0001911 R-ASA-1122541-3 AVESA.00001b.r3.3Cg0001911 [cytosol] R-ASA-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Avena sativa AVESA.00001b.r3.3Cg0001911 R-ASA-1122541-3 AVESA.00001b.r3.3Cg0001911 [cytosol] R-ASA-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Avena sativa AVESA.00001b.r3.3Cg0001917 R-ASA-1125058-3 AVESA.00001b.r3.3Cg0001917 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.3Cg0001930 R-ASA-9916314-2 OsDOS [nucleoplasm] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.3Cg0001933 R-ASA-1125060-2 AVESA.00001b.r3.3Cg0001933 [cytosol] R-ASA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119334 Ethylene biosynthesis from methionine none Avena sativa AVESA.00001b.r3.3Cg0001933 R-ASA-1125060-2 AVESA.00001b.r3.3Cg0001933 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.3Cg0001942 R-ASA-6788127-2 AVESA.00001b.r3.3Cg0001942 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.3Cg0001942 R-ASA-6788179-2 AVESA.00001b.r3.3Cg0001942 [cytosol] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.3Cg0001944 R-ASA-5679376-3 AVESA.00001b.r3.3Cg0001944 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.3Cg0001983 R-ASA-5654816-2 AVESA.00001b.r3.3Cg0001983 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.3Cg0002009 R-ASA-4752547-3 AVESA.00001b.r3.3Cg0002009 [plastid stroma] R-ASA-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119498 Phylloquinone biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002036 R-ASA-9612372 AVESA.00001b.r3.3Cg0002036 [mitochondrial matrix] R-ASA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119612 Cysteine degradation none Avena sativa AVESA.00001b.r3.3Cg0002057 R-ASA-5608132-2 AVESA.00001b.r3.3Cg0002057 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.3Cg0002085 R-ASA-1124692 AVESA.00001b.r3.3Cg0002085 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.3Cg0002109 R-ASA-1129859-3 AVESA.00001b.r3.3Cg0002109 [chloroplast stroma] R-ASA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119443 Ammonia assimilation cycle none Avena sativa AVESA.00001b.r3.3Cg0002109 R-ASA-5606382-3 AVESA.00001b.r3.3Cg0002109 [plastid stroma] R-ASA-1119535 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119535 Glutamate biosynthesis IV none Avena sativa AVESA.00001b.r3.3Cg0002114 R-ASA-9640785 AVESA.00001b.r3.3Cg0002114 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.3Cg0002114 R-ASA-9640785 AVESA.00001b.r3.3Cg0002114 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.3Cg0002141 R-ASA-5632121-2 AVESA.00001b.r3.3Cg0002141 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.3Cg0002151 R-ASA-1130059-2 AVESA.00001b.r3.3Cg0002151 [cytosol] R-ASA-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119262 Threonine biosynthesis from homoserine none Avena sativa AVESA.00001b.r3.3Cg0002194 R-ASA-1130006-2 AVESA.00001b.r3.3Cg0002194 [plastid stroma] R-ASA-1119569 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119569 Kievitone biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002200 R-ASA-6787238-3 AVESA.00001b.r3.3Cg0002200 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.3Cg0002231 R-ASA-8987557-3 AVESA.00001b.r3.3Cg0002231 [mitochondrial matrix] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.3Cg0002252 R-ASA-1129466 AVESA.00001b.r3.3Cg0002252 [cytosol] R-ASA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119449 Carotenoid biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002275 R-ASA-1128798-2 AVESA.00001b.r3.3Cg0002275 [cytosol] R-ASA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119331 Cysteine biosynthesis I none Avena sativa AVESA.00001b.r3.3Cg0002281 R-ASA-1127753-3 AVESA.00001b.r3.3Cg0002281 [cytosol] R-ASA-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119278 PRPP biosynthesis I none Avena sativa AVESA.00001b.r3.3Cg0002312 R-ASA-1126095 AVESA.00001b.r3.3Cg0002312 [cytosol] R-ASA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119389 Phenylalanine biosynthesis I none Avena sativa AVESA.00001b.r3.3Cg0002341 R-ASA-1125734 AVESA.00001b.r3.3Cg0002341 [cytosol] R-ASA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119281 Aspartate biosynthesis I none Avena sativa AVESA.00001b.r3.3Cg0002341 R-ASA-5632000 AVESA.00001b.r3.3Cg0002341 [plastid stroma] R-ASA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119553 Asparagine biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002349 R-ASA-1123745-2 AVESA.00001b.r3.3Cg0002349 [endoplasmic reticulum membrane] R-ASA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119260 Cardiolipin biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002349 R-ASA-1123745-2 AVESA.00001b.r3.3Cg0002349 [endoplasmic reticulum membrane] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.3Cg0002375 R-ASA-5608212 AVESA.00001b.r3.3Cg0002375 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.3Cg0002375 R-ASA-5608212 AVESA.00001b.r3.3Cg0002375 [nucleoplasm] R-ASA-9675304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675304 Lateral root emergence none Avena sativa AVESA.00001b.r3.3Cg0002381 R-ASA-1124083-3 AVESA.00001b.r3.3Cg0002381 [cytosol] R-ASA-1119323 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119323 Lipid-A-precursor biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002393 R-ASA-1124491-3 AVESA.00001b.r3.3Cg0002393 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002394 R-ASA-6788120-2 AVESA.00001b.r3.3Cg0002394 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.3Cg0002394 R-ASA-6788120-2 AVESA.00001b.r3.3Cg0002394 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.3Cg0002418 R-ASA-5367761 AVESA.00001b.r3.3Cg0002418 [plastid stroma] R-ASA-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5367729 Strigolactone biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002440 R-ASA-1126981-2 AVESA.00001b.r3.3Cg0002440 [nucleoplasm] R-ASA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030680 Crown root development none Avena sativa AVESA.00001b.r3.3Cg0002456 R-ASA-1127614-10 AVESA.00001b.r3.3Cg0002456 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002456 R-ASA-1127614-10 AVESA.00001b.r3.3Cg0002456 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002456 R-ASA-1127614-10 AVESA.00001b.r3.3Cg0002456 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.3Cg0002457 R-ASA-1127614-6 AVESA.00001b.r3.3Cg0002457 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002457 R-ASA-1127614-6 AVESA.00001b.r3.3Cg0002457 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002457 R-ASA-1127614-6 AVESA.00001b.r3.3Cg0002457 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.3Cg0002458 R-ASA-1127614-13 AVESA.00001b.r3.3Cg0002458 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002458 R-ASA-1127614-13 AVESA.00001b.r3.3Cg0002458 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002458 R-ASA-1127614-13 AVESA.00001b.r3.3Cg0002458 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.3Cg0002459 R-ASA-1127614-18 AVESA.00001b.r3.3Cg0002459 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002459 R-ASA-1127614-18 AVESA.00001b.r3.3Cg0002459 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002459 R-ASA-1127614-18 AVESA.00001b.r3.3Cg0002459 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.3Cg0002471 R-ASA-6788026-2 AVESA.00001b.r3.3Cg0002471 [cytosol] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.3Cg0002483 R-ASA-1124809 AVESA.00001b.r3.3Cg0002483 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.3Cg0002487 R-ASA-9607105-2 AVESA.00001b.r3.3Cg0002487 [mitochondrion] R-ASA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9607185 Generation of superoxide radicals none Avena sativa AVESA.00001b.r3.3Cg0002500 R-ASA-1127292-2 AVESA.00001b.r3.3Cg0002500 [plastid stroma] R-ASA-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Avena sativa AVESA.00001b.r3.3Cg0002518 R-ASA-9639874 AVESA.00001b.r3.3Cg0002518 [plasma membrane] R-ASA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639861 Development of root hair none Avena sativa AVESA.00001b.r3.3Cg0002542 R-ASA-9916309-2 CPK3 [plasma membrane] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.3Cg0002567 R-ASA-6786908-2 AVESA.00001b.r3.3Cg0002567 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.3Cg0002567 R-ASA-6786908-2 AVESA.00001b.r3.3Cg0002567 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.3Cg0002590 R-ASA-1123787 AVESA.00001b.r3.3Cg0002590 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002590 R-ASA-1123787 AVESA.00001b.r3.3Cg0002590 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.3Cg0002601 R-ASA-8868904-3 AVESA.00001b.r3.3Cg0002601 [endoplasmic reticulum membrane] R-ASA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8868949 Intracellular auxin transport none Avena sativa AVESA.00001b.r3.3Cg0002610 R-ASA-6788072-2 AVESA.00001b.r3.3Cg0002610 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.3Cg0002637 R-ASA-9608678-2 AVESA.00001b.r3.3Cg0002637 [cytosol] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.3Cg0002637 R-ASA-8986843-2 AVESA.00001b.r3.3Cg0002637 [nucleoplasm] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.3Cg0002656 R-ASA-6788041 AVESA.00001b.r3.3Cg0002656 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.3Cg0002657 R-ASA-1127373-3 AVESA.00001b.r3.3Cg0002657 [cytosol] R-ASA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119297 Beta-alanine biosynthesis III none Avena sativa AVESA.00001b.r3.3Cg0002691 R-ASA-1130025 AVESA.00001b.r3.3Cg0002691 [endosome] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.3Cg0002691 R-ASA-5679302 AVESA.00001b.r3.3Cg0002691 [plasma membrane] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.3Cg0002692 R-ASA-1250419-11 AVESA.00001b.r3.3Cg0002692 [cytosol] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002692 R-ASA-1129637-11 AVESA.00001b.r3.3Cg0002692 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.3Cg0002693 R-ASA-1250419-7 AVESA.00001b.r3.3Cg0002693 [cytosol] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002693 R-ASA-1129637-7 AVESA.00001b.r3.3Cg0002693 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.3Cg0002694 R-ASA-4723690-2 AVESA.00001b.r3.3Cg0002694 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.3Cg0002698 R-ASA-9025331-2 AVESA.00001b.r3.3Cg0002698 [cytosol] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.3Cg0002707 R-ASA-5654913-2 AVESA.00001b.r3.3Cg0002707 [Golgi lumen] R-ASA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654909 Xylan biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002725 R-ASA-8853988-3 Phosphatidylglycerophosphatase [mitochondrial matrix] R-ASA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119260 Cardiolipin biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002821 R-ASA-1127318 AVESA.00001b.r3.3Cg0002821 [cytosol] R-ASA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002821 R-ASA-1127318 AVESA.00001b.r3.3Cg0002821 [cytosol] R-ASA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119438 Secologanin and strictosidine biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002821 R-ASA-1127318 AVESA.00001b.r3.3Cg0002821 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.3Cg0002833 R-ASA-9916108 AVESA.00001b.r3.3Cg0002833 [extracellular region] R-ASA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119403 Removal of superoxide radicals none Avena sativa AVESA.00001b.r3.3Cg0002833 R-ASA-9916108 AVESA.00001b.r3.3Cg0002833 [extracellular region] R-ASA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9607185 Generation of superoxide radicals none Avena sativa AVESA.00001b.r3.3Cg0002843 R-ASA-5149632-2 AVESA.00001b.r3.3Cg0002843 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.3Cg0002870 R-ASA-1130202-3 AVESA.00001b.r3.3Cg0002870 [cytosol] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002888 R-ASA-1124269 AVESA.00001b.r3.3Cg0002888 [cytosol] R-ASA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119456 Brassinosteroid biosynthesis II none Avena sativa AVESA.00001b.r3.3Cg0002893 R-ASA-5149683 AVESA.00001b.r3.3Cg0002893 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.3Cg0002898 R-ASA-6787181 AVESA.00001b.r3.3Cg0002898 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.3Cg0002910 R-ASA-8858070-2 AVESA.00001b.r3.3Cg0002910 [plasma membrane] R-ASA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639861 Development of root hair none Avena sativa AVESA.00001b.r3.3Cg0002911 R-ASA-9640886-4 AVESA.00001b.r3.3Cg0002911 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.3Cg0002911 R-ASA-9640886-4 AVESA.00001b.r3.3Cg0002911 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.3Cg0002931 R-ASA-6787863 AVESA.00001b.r3.3Cg0002931 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.3Cg0002952 R-ASA-1124453 AVESA.00001b.r3.3Cg0002952 [peroxisomal matrix] R-ASA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119407 Ureide biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0002973 R-ASA-9928771 AVESA.00001b.r3.3Cg0002973 [nucleoplasm] R-ASA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928831 Severe drought none Avena sativa AVESA.00001b.r3.3Cg0002977 R-ASA-9645950-3 AVESA.00001b.r3.3Cg0002977 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.3Cg0002977 R-ASA-9645950-3 AVESA.00001b.r3.3Cg0002977 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.3Cg0002977 R-ASA-9645950-3 AVESA.00001b.r3.3Cg0002977 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.3Cg0002977 R-ASA-9645950-3 AVESA.00001b.r3.3Cg0002977 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.3Cg0002977 R-ASA-9645950-3 AVESA.00001b.r3.3Cg0002977 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.3Cg0003040 R-ASA-1125834-2 AVESA.00001b.r3.3Cg0003040 [cytosol] R-ASA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119379 Flavin biosynthesis none Avena sativa AVESA.00001b.r3.3Cg0003067 R-ASA-9930308-2 SNAC2 (OsNAC6) [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.3Cg0003070 R-ASA-9675790 AVESA.00001b.r3.3Cg0003070 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.3Cg0003084 R-ASA-1124242-2 AVESA.00001b.r3.3Cg0003084 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.3Cg0003118 R-ASA-9639789-2 AVESA.00001b.r3.3Cg0003118 [plasma membrane] R-ASA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639861 Development of root hair none Avena sativa AVESA.00001b.r3.3Dg0000045 R-ASA-1128678-3 AVESA.00001b.r3.3Dg0000045 [cytosol] R-ASA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119292 Cytokinins 7-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0000045 R-ASA-1128678-3 AVESA.00001b.r3.3Dg0000045 [cytosol] R-ASA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119375 Cytokinins 9-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0000045 R-ASA-1128678-3 AVESA.00001b.r3.3Dg0000045 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0000046 R-ASA-1128678-7 AVESA.00001b.r3.3Dg0000046 [cytosol] R-ASA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119292 Cytokinins 7-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0000046 R-ASA-1128678-7 AVESA.00001b.r3.3Dg0000046 [cytosol] R-ASA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119375 Cytokinins 9-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0000046 R-ASA-1128678-7 AVESA.00001b.r3.3Dg0000046 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0000084 R-ASA-8933813-3 AVESA.00001b.r3.3Dg0000084 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.3Dg0000084 R-ASA-8933813-3 AVESA.00001b.r3.3Dg0000084 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.3Dg0000084 R-ASA-8933813-3 AVESA.00001b.r3.3Dg0000084 [nucleoplasm] R-ASA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924451 Shoot (tiller) formation and regulation of tiller angle none Avena sativa AVESA.00001b.r3.3Dg0000084 R-ASA-8933813-3 AVESA.00001b.r3.3Dg0000084 [nucleoplasm] R-ASA-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928946 Drought escape (DE) via ABA-independent pathway none Avena sativa AVESA.00001b.r3.3Dg0000132 R-ASA-1124096 AVESA.00001b.r3.3Dg0000132 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.3Dg0000133 R-ASA-1126395 AVESA.00001b.r3.3Dg0000133 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.3Dg0000168 R-ASA-6787202-2 AVESA.00001b.r3.3Dg0000168 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.3Dg0000232 R-ASA-5632139 AVESA.00001b.r3.3Dg0000232 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.3Dg0000242 R-ASA-9675827 AVESA.00001b.r3.3Dg0000242 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.3Dg0000242 R-ASA-9675827 AVESA.00001b.r3.3Dg0000242 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.3Dg0000242 R-ASA-9675827 AVESA.00001b.r3.3Dg0000242 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.3Dg0000262 R-ASA-1125698-3 AVESA.00001b.r3.3Dg0000262 [cytosol] R-ASA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119436 Peptidoglycan biosynthesis I none Avena sativa AVESA.00001b.r3.3Dg0000293 R-ASA-5679376-2 AVESA.00001b.r3.3Dg0000293 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.3Dg0000295 R-ASA-6788127-3 AVESA.00001b.r3.3Dg0000295 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.3Dg0000295 R-ASA-6788179-3 AVESA.00001b.r3.3Dg0000295 [cytosol] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.3Dg0000311 R-ASA-9916314 OsDOS [nucleoplasm] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.3Dg0000317 R-ASA-1125058-2 AVESA.00001b.r3.3Dg0000317 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.3Dg0000321 R-ASA-1122541 AVESA.00001b.r3.3Dg0000321 [cytosol] R-ASA-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Avena sativa AVESA.00001b.r3.3Dg0000321 R-ASA-1122541 AVESA.00001b.r3.3Dg0000321 [cytosol] R-ASA-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Avena sativa AVESA.00001b.r3.3Dg0000331 R-ASA-1126435-2 AVESA.00001b.r3.3Dg0000331 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.3Dg0000356 R-ASA-6787066 AVESA.00001b.r3.3Dg0000356 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.3Dg0000360 R-ASA-9675365-2 AVESA.00001b.r3.3Dg0000360 [nucleoplasm] R-ASA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675508 Root elongation none Avena sativa AVESA.00001b.r3.3Dg0000485 R-ASA-1129082 AVESA.00001b.r3.3Dg0000485 [mitochondrial matrix] R-ASA-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119445 Beta-alanine biosynthesis II none Avena sativa AVESA.00001b.r3.3Dg0000547 R-ASA-9675273-2 AVESA.00001b.r3.3Dg0000547 [nucleoplasm] R-ASA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030557 Lateral root initiation none Avena sativa AVESA.00001b.r3.3Dg0000555 R-ASA-5632301 AVESA.00001b.r3.3Dg0000555 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.3Dg0000555 R-ASA-5632301 AVESA.00001b.r3.3Dg0000555 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.3Dg0000555 R-ASA-5632301 AVESA.00001b.r3.3Dg0000555 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.3Dg0000604 R-ASA-4788601 AVESA.00001b.r3.3Dg0000604 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.3Dg0000683 R-ASA-1123596-3 AVESA.00001b.r3.3Dg0000683 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.3Dg0000738 R-ASA-9612380-2 AVESA.00001b.r3.3Dg0000738 [cytosol] R-ASA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119612 Cysteine degradation none Avena sativa AVESA.00001b.r3.3Dg0000740 R-ASA-8933777-2 AVESA.00001b.r3.3Dg0000740 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.3Dg0000740 R-ASA-9924457-2 PIL15 [nucleoplasm] R-ASA-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924494 Gravity sensing and statolith sedimentation none Avena sativa AVESA.00001b.r3.3Dg0000744 R-ASA-1125615-2 AVESA.00001b.r3.3Dg0000744 [cytosol] R-ASA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119334 Ethylene biosynthesis from methionine none Avena sativa AVESA.00001b.r3.3Dg0000744 R-ASA-1125615-2 AVESA.00001b.r3.3Dg0000744 [cytosol] R-ASA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119501 S-adenosyl-L-methionine cycle none Avena sativa AVESA.00001b.r3.3Dg0000744 R-ASA-1125615-2 AVESA.00001b.r3.3Dg0000744 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.3Dg0000801 R-ASA-1127695 AVESA.00001b.r3.3Dg0000801 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0000802 R-ASA-2685730-5 AVESA.00001b.r3.3Dg0000802 [cytosol] R-ASA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119580 IAA biosynthesis II none Avena sativa AVESA.00001b.r3.3Dg0000827 R-ASA-1126625-3 AVESA.00001b.r3.3Dg0000827 [cytosol] R-ASA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119334 Ethylene biosynthesis from methionine none Avena sativa AVESA.00001b.r3.3Dg0000827 R-ASA-1126625-3 AVESA.00001b.r3.3Dg0000827 [cytosol] R-ASA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119501 S-adenosyl-L-methionine cycle none Avena sativa AVESA.00001b.r3.3Dg0000827 R-ASA-1126625-3 AVESA.00001b.r3.3Dg0000827 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.3Dg0000827 R-ASA-9025797-3 AVESA.00001b.r3.3Dg0000827 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0000851 R-ASA-9607132-5 RBOHB [plasma membrane] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.3Dg0000851 R-ASA-9611529-5 phospho-phosphorylated-RBOHB [plasma membrane] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.3Dg0000856 R-ASA-8986605-2 AVESA.00001b.r3.3Dg0000856 [mitochondrial matrix] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.3Dg0000856 R-ASA-1124620-2 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-ASA-1119351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119351 Mitochondrial pyruvate metabolism none Avena sativa AVESA.00001b.r3.3Dg0000856 R-ASA-1124620-2 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.3Dg0000926 R-ASA-9640761-2 AVESA.00001b.r3.3Dg0000926 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.3Dg0000926 R-ASA-9640761-2 AVESA.00001b.r3.3Dg0000926 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.3Dg0000926 R-ASA-9640761-2 AVESA.00001b.r3.3Dg0000926 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.3Dg0001149 R-ASA-9684771-3 AVESA.00001b.r3.3Dg0001149 [cytosol] R-ASA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609102 Flower development none Avena sativa AVESA.00001b.r3.3Dg0001179 R-ASA-9684771-4 AVESA.00001b.r3.3Dg0001179 [cytosol] R-ASA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609102 Flower development none Avena sativa AVESA.00001b.r3.3Dg0001224 R-ASA-1125570-2 AVESA.00001b.r3.3Dg0001224 [cytosol] R-ASA-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119450 Homocysteine biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0001236 R-ASA-1130327-2 AVESA.00001b.r3.3Dg0001236 [cytosol] R-ASA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119586 Cyanate degradation none Avena sativa AVESA.00001b.r3.3Dg0001247 R-ASA-1128126 AVESA.00001b.r3.3Dg0001247 [endosome] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.3Dg0001247 R-ASA-5679348 AVESA.00001b.r3.3Dg0001247 [plasma membrane] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.3Dg0001276 R-ASA-1128071 AVESA.00001b.r3.3Dg0001276 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.3Dg0001288 R-ASA-1122727-3 AVESA.00001b.r3.3Dg0001288 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.3Dg0001288 R-ASA-1122727-3 AVESA.00001b.r3.3Dg0001288 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0001305 R-ASA-5654816 AVESA.00001b.r3.3Dg0001305 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.3Dg0001319 R-ASA-4752547 AVESA.00001b.r3.3Dg0001319 [plastid stroma] R-ASA-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119498 Phylloquinone biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0001358 R-ASA-9612372-3 AVESA.00001b.r3.3Dg0001358 [mitochondrial matrix] R-ASA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119612 Cysteine degradation none Avena sativa AVESA.00001b.r3.3Dg0001369 R-ASA-5608132 AVESA.00001b.r3.3Dg0001369 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.3Dg0001395 R-ASA-1124692-3 AVESA.00001b.r3.3Dg0001395 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.3Dg0001416 R-ASA-1129859 AVESA.00001b.r3.3Dg0001416 [chloroplast stroma] R-ASA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119443 Ammonia assimilation cycle none Avena sativa AVESA.00001b.r3.3Dg0001416 R-ASA-5606382 AVESA.00001b.r3.3Dg0001416 [plastid stroma] R-ASA-1119535 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119535 Glutamate biosynthesis IV none Avena sativa AVESA.00001b.r3.3Dg0001425 R-ASA-8987467-2 AVESA.00001b.r3.3Dg0001425 [chloroplast] R-ASA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119502 Allantoin degradation none Avena sativa AVESA.00001b.r3.3Dg0001430 R-ASA-9640785-2 AVESA.00001b.r3.3Dg0001430 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.3Dg0001430 R-ASA-9640785-2 AVESA.00001b.r3.3Dg0001430 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.3Dg0001459 R-ASA-5632121-3 AVESA.00001b.r3.3Dg0001459 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.3Dg0001508 R-ASA-1130006 AVESA.00001b.r3.3Dg0001508 [plastid stroma] R-ASA-1119569 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119569 Kievitone biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0001515 R-ASA-6787238 AVESA.00001b.r3.3Dg0001515 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.3Dg0001530 R-ASA-9658664-2 AVESA.00001b.r3.3Dg0001530 [plasma membrane] R-ASA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119567 Beta-alanine biosynthesis I none Avena sativa AVESA.00001b.r3.3Dg0001534 R-ASA-8987557-2 AVESA.00001b.r3.3Dg0001534 [mitochondrial matrix] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.3Dg0001547 R-ASA-8934263 AVESA.00001b.r3.3Dg0001547 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.3Dg0001580 R-ASA-1128798 AVESA.00001b.r3.3Dg0001580 [cytosol] R-ASA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119331 Cysteine biosynthesis I none Avena sativa AVESA.00001b.r3.3Dg0001592 R-ASA-1127753 AVESA.00001b.r3.3Dg0001592 [cytosol] R-ASA-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119278 PRPP biosynthesis I none Avena sativa AVESA.00001b.r3.3Dg0001619 R-ASA-1126095-2 AVESA.00001b.r3.3Dg0001619 [cytosol] R-ASA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119389 Phenylalanine biosynthesis I none Avena sativa AVESA.00001b.r3.3Dg0001649 R-ASA-1125734-3 AVESA.00001b.r3.3Dg0001649 [cytosol] R-ASA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119281 Aspartate biosynthesis I none Avena sativa AVESA.00001b.r3.3Dg0001649 R-ASA-5632000-3 AVESA.00001b.r3.3Dg0001649 [plastid stroma] R-ASA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119553 Asparagine biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0001656 R-ASA-1123745-3 AVESA.00001b.r3.3Dg0001656 [endoplasmic reticulum membrane] R-ASA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119260 Cardiolipin biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0001656 R-ASA-1123745-3 AVESA.00001b.r3.3Dg0001656 [endoplasmic reticulum membrane] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.3Dg0001682 R-ASA-1124083-2 AVESA.00001b.r3.3Dg0001682 [cytosol] R-ASA-1119323 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119323 Lipid-A-precursor biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0001694 R-ASA-1124491 AVESA.00001b.r3.3Dg0001694 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0001695 R-ASA-6788120 AVESA.00001b.r3.3Dg0001695 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.3Dg0001695 R-ASA-6788120 AVESA.00001b.r3.3Dg0001695 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.3Dg0001743 R-ASA-1126981 AVESA.00001b.r3.3Dg0001743 [nucleoplasm] R-ASA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030680 Crown root development none Avena sativa AVESA.00001b.r3.3Dg0001760 R-ASA-1127614-15 AVESA.00001b.r3.3Dg0001760 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0001760 R-ASA-1127614-15 AVESA.00001b.r3.3Dg0001760 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0001760 R-ASA-1127614-15 AVESA.00001b.r3.3Dg0001760 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.3Dg0001761 R-ASA-1127614-7 AVESA.00001b.r3.3Dg0001761 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0001761 R-ASA-1127614-7 AVESA.00001b.r3.3Dg0001761 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0001761 R-ASA-1127614-7 AVESA.00001b.r3.3Dg0001761 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.3Dg0001764 R-ASA-1127292 AVESA.00001b.r3.3Dg0001764 [plastid stroma] R-ASA-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Avena sativa AVESA.00001b.r3.3Dg0001775 R-ASA-9607105-3 AVESA.00001b.r3.3Dg0001775 [mitochondrion] R-ASA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9607185 Generation of superoxide radicals none Avena sativa AVESA.00001b.r3.3Dg0001794 R-ASA-6788026-3 AVESA.00001b.r3.3Dg0001794 [cytosol] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.3Dg0001820 R-ASA-9639874-3 AVESA.00001b.r3.3Dg0001820 [plasma membrane] R-ASA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639861 Development of root hair none Avena sativa AVESA.00001b.r3.3Dg0001836 R-ASA-9916309 CPK3 [plasma membrane] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.3Dg0001857 R-ASA-6786908-3 AVESA.00001b.r3.3Dg0001857 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.3Dg0001857 R-ASA-6786908-3 AVESA.00001b.r3.3Dg0001857 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.3Dg0001879 R-ASA-9766833 AVESA.00001b.r3.3Dg0001879 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.3Dg0001887 R-ASA-1123787-3 AVESA.00001b.r3.3Dg0001887 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0001887 R-ASA-1123787-3 AVESA.00001b.r3.3Dg0001887 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.3Dg0001897 R-ASA-8868904 AVESA.00001b.r3.3Dg0001897 [endoplasmic reticulum membrane] R-ASA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8868949 Intracellular auxin transport none Avena sativa AVESA.00001b.r3.3Dg0001904 R-ASA-6788072-3 AVESA.00001b.r3.3Dg0001904 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.3Dg0001929 R-ASA-9608678 AVESA.00001b.r3.3Dg0001929 [cytosol] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.3Dg0001929 R-ASA-8986843 AVESA.00001b.r3.3Dg0001929 [nucleoplasm] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.3Dg0001945 R-ASA-6788041-2 AVESA.00001b.r3.3Dg0001945 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.3Dg0001946 R-ASA-1127373-2 AVESA.00001b.r3.3Dg0001946 [cytosol] R-ASA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119297 Beta-alanine biosynthesis III none Avena sativa AVESA.00001b.r3.3Dg0001949 R-ASA-1129600-3 AVESA.00001b.r3.3Dg0001949 [cytosol] R-ASA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119407 Ureide biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0001970 R-ASA-1130025-2 AVESA.00001b.r3.3Dg0001970 [endosome] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.3Dg0001970 R-ASA-5679302-2 AVESA.00001b.r3.3Dg0001970 [plasma membrane] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.3Dg0001971 R-ASA-1250419 AVESA.00001b.r3.3Dg0001971 [cytosol] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0001971 R-ASA-1129637 AVESA.00001b.r3.3Dg0001971 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.3Dg0001972 R-ASA-1250419-6 AVESA.00001b.r3.3Dg0001972 [cytosol] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0001972 R-ASA-1129637-6 AVESA.00001b.r3.3Dg0001972 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.3Dg0001973 R-ASA-1250419-9 AVESA.00001b.r3.3Dg0001973 [cytosol] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0001973 R-ASA-1129637-9 AVESA.00001b.r3.3Dg0001973 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.3Dg0001974 R-ASA-4723690-3 AVESA.00001b.r3.3Dg0001974 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.3Dg0001976 R-ASA-9025331 AVESA.00001b.r3.3Dg0001976 [cytosol] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.3Dg0001985 R-ASA-5654913-3 AVESA.00001b.r3.3Dg0001985 [Golgi lumen] R-ASA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654909 Xylan biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0001999 R-ASA-8853988 Phosphatidylglycerophosphatase [mitochondrial matrix] R-ASA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119260 Cardiolipin biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0002011 R-ASA-1127999-2 AVESA.00001b.r3.3Dg0002011 [mitochondrial inner membrane] R-ASA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119260 Cardiolipin biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0002040 R-ASA-9025487 AVESA.00001b.r3.3Dg0002040 [cytosol] R-ASA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119325 Sphingolipid metabolism none Avena sativa AVESA.00001b.r3.3Dg0002114 R-ASA-1127752-3 AVESA.00001b.r3.3Dg0002114 [cytosol] R-ASA-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119417 Stachyose biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0002117 R-ASA-1125521 AVESA.00001b.r3.3Dg0002117 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.3Dg0002163 R-ASA-5149632 AVESA.00001b.r3.3Dg0002163 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.3Dg0002179 R-ASA-1130088 AVESA.00001b.r3.3Dg0002179 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0002323 R-ASA-5608164-3 AVESA.00001b.r3.3Dg0002323 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.3Dg0002323 R-ASA-5608164-3 AVESA.00001b.r3.3Dg0002323 [nucleoplasm] R-ASA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030557 Lateral root initiation none Avena sativa AVESA.00001b.r3.3Dg0002323 R-ASA-5608164-3 AVESA.00001b.r3.3Dg0002323 [nucleoplasm] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.3Dg0002323 R-ASA-9658967-3 AVESA.00001b.r3.3Dg0002323 [cytosol] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.3Dg0002347 R-ASA-9645809-3 AVESA.00001b.r3.3Dg0002347 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.3Dg0002347 R-ASA-9645809-3 AVESA.00001b.r3.3Dg0002347 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.3Dg0002347 R-ASA-9645809-3 AVESA.00001b.r3.3Dg0002347 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.3Dg0002404 R-ASA-5632341-3 AVESA.00001b.r3.3Dg0002404 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.3Dg0002404 R-ASA-5632170-3 phospho-AVESA.00001b.r3.3Dg0002404 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.3Dg0002444 R-ASA-9826643-3 AVESA.00001b.r3.3Dg0002444 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.3Dg0002491 R-ASA-1124969-2 AVESA.00001b.r3.3Dg0002491 [cytosol] R-ASA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119265 Tetrahydrofolate biosynthesis I none Avena sativa AVESA.00001b.r3.3Dg0002491 R-ASA-1124969-2 AVESA.00001b.r3.3Dg0002491 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.3Dg0002501 R-ASA-9645809-5 AVESA.00001b.r3.3Dg0002501 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.3Dg0002501 R-ASA-9645809-5 AVESA.00001b.r3.3Dg0002501 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.3Dg0002501 R-ASA-9645809-5 AVESA.00001b.r3.3Dg0002501 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.3Dg0002507 R-ASA-9826705 OSH71 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.3Dg0002519 R-ASA-1129184-2 AVESA.00001b.r3.3Dg0002519 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.3Dg0002519 R-ASA-1129184-2 AVESA.00001b.r3.3Dg0002519 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.3Dg0002519 R-ASA-5606505-2 AVESA.00001b.r3.3Dg0002519 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.3Dg0002538 R-ASA-9611863-3 AVESA.00001b.r3.3Dg0002538 [mitochondrial matrix] R-ASA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119479 Valine degradation none Avena sativa AVESA.00001b.r3.3Dg0002561 R-ASA-5654933-2 AVESA.00001b.r3.3Dg0002561 [Golgi lumen] R-ASA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654909 Xylan biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0002639 R-ASA-1124742-2 AVESA.00001b.r3.3Dg0002639 [cytosol] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0002639 R-ASA-1124742-2 AVESA.00001b.r3.3Dg0002639 [cytosol] R-ASA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119570 Cytosolic glycolysis none Avena sativa AVESA.00001b.r3.3Dg0002677 R-ASA-9645809 AVESA.00001b.r3.3Dg0002677 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.3Dg0002677 R-ASA-9645809 AVESA.00001b.r3.3Dg0002677 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.3Dg0002677 R-ASA-9645809 AVESA.00001b.r3.3Dg0002677 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.3Dg0002678 R-ASA-9645809-4 AVESA.00001b.r3.3Dg0002678 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.3Dg0002678 R-ASA-9645809-4 AVESA.00001b.r3.3Dg0002678 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.3Dg0002678 R-ASA-9645809-4 AVESA.00001b.r3.3Dg0002678 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.3Dg0002680 R-ASA-9611477-2 phospho-phosphorylated-RLCK176 [cytosol] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.3Dg0002730 R-ASA-1126625-5 AVESA.00001b.r3.3Dg0002730 [cytosol] R-ASA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119334 Ethylene biosynthesis from methionine none Avena sativa AVESA.00001b.r3.3Dg0002730 R-ASA-1126625-5 AVESA.00001b.r3.3Dg0002730 [cytosol] R-ASA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119501 S-adenosyl-L-methionine cycle none Avena sativa AVESA.00001b.r3.3Dg0002730 R-ASA-1126625-5 AVESA.00001b.r3.3Dg0002730 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.3Dg0002730 R-ASA-9025797-5 AVESA.00001b.r3.3Dg0002730 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0002731 R-ASA-1126625-4 AVESA.00001b.r3.3Dg0002731 [cytosol] R-ASA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119334 Ethylene biosynthesis from methionine none Avena sativa AVESA.00001b.r3.3Dg0002731 R-ASA-1126625-4 AVESA.00001b.r3.3Dg0002731 [cytosol] R-ASA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119501 S-adenosyl-L-methionine cycle none Avena sativa AVESA.00001b.r3.3Dg0002731 R-ASA-1126625-4 AVESA.00001b.r3.3Dg0002731 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.3Dg0002731 R-ASA-9025797-4 AVESA.00001b.r3.3Dg0002731 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0002737 R-ASA-1123745-6 AVESA.00001b.r3.3Dg0002737 [endoplasmic reticulum membrane] R-ASA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119260 Cardiolipin biosynthesis none Avena sativa AVESA.00001b.r3.3Dg0002737 R-ASA-1123745-6 AVESA.00001b.r3.3Dg0002737 [endoplasmic reticulum membrane] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.3Dg0002749 R-ASA-1124935 AVESA.00001b.r3.3Dg0002749 [cytosol] R-ASA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119349 S-methylmethionine cycle none Avena sativa AVESA.00001b.r3.4Ag0000012 R-ASA-9682481-3 AVESA.00001b.r3.4Ag0000012 [cytosol] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0000012 R-ASA-9682481-3 AVESA.00001b.r3.4Ag0000012 [cytosol] R-ASA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119628 GDP-mannose metabolism none Avena sativa AVESA.00001b.r3.4Ag0000059 R-ASA-1127526 AVESA.00001b.r3.4Ag0000059 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0000067 R-ASA-5608102 AVESA.00001b.r3.4Ag0000067 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.4Ag0000080 R-ASA-9658611 AVESA.00001b.r3.4Ag0000080 [plastid stroma] R-ASA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119263 Arginine biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0000080 R-ASA-9658611 AVESA.00001b.r3.4Ag0000080 [plastid stroma] R-ASA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119539 Ornithine biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0000080 R-ASA-9658611 AVESA.00001b.r3.4Ag0000080 [plastid stroma] R-ASA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119622 Arginine biosynthesis II (acetyl cycle) none Avena sativa AVESA.00001b.r3.4Ag0000090 R-ASA-9640753 AVESA.00001b.r3.4Ag0000090 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.4Ag0000090 R-ASA-9640753 AVESA.00001b.r3.4Ag0000090 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.4Ag0000090 R-ASA-9640753 AVESA.00001b.r3.4Ag0000090 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.4Ag0000111 R-ASA-9675803 AVESA.00001b.r3.4Ag0000111 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.4Ag0000139 R-ASA-9681910 AVESA.00001b.r3.4Ag0000139 [Golgi membrane] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.4Ag0000156 R-ASA-5632114-2 AVESA.00001b.r3.4Ag0000156 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.4Ag0000257 R-ASA-9640734-3 AVESA.00001b.r3.4Ag0000257 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.4Ag0000257 R-ASA-9640881-3 phospho-AVESA.00001b.r3.4Ag0000257 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.4Ag0000336 R-ASA-8933824-2 AVESA.00001b.r3.4Ag0000336 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.4Ag0000343 R-ASA-6787262-2 AVESA.00001b.r3.4Ag0000343 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Ag0000348 R-ASA-5632111-3 AVESA.00001b.r3.4Ag0000348 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.4Ag0000348 R-ASA-5632216-3 phospho-AVESA.00001b.r3.4Ag0000348 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.4Ag0000365 R-ASA-9826669 OsYABBY6 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.4Ag0000373 R-ASA-1125151-3 AVESA.00001b.r3.4Ag0000373 [cytosol] R-ASA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119400 Methionine biosynthesis II none Avena sativa AVESA.00001b.r3.4Ag0000373 R-ASA-1125151-3 AVESA.00001b.r3.4Ag0000373 [cytosol] R-ASA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119501 S-adenosyl-L-methionine cycle none Avena sativa AVESA.00001b.r3.4Ag0000387 R-ASA-1122632-2 AVESA.00001b.r3.4Ag0000387 [cytosol] R-ASA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119331 Cysteine biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0000389 R-ASA-1124765 AVESA.00001b.r3.4Ag0000389 [cytosol] R-ASA-1119499 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119499 Capsidiol biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0000408 R-ASA-9626337-2 AVESA.00001b.r3.4Ag0000408 [Golgi-associated vesicle] R-ASA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9626305 Regulatory network of nutrient accumulation none Avena sativa AVESA.00001b.r3.4Ag0000445 R-ASA-1124969-6 AVESA.00001b.r3.4Ag0000445 [cytosol] R-ASA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119265 Tetrahydrofolate biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0000445 R-ASA-1124969-6 AVESA.00001b.r3.4Ag0000445 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.4Ag0000453 R-ASA-1124490-3 AVESA.00001b.r3.4Ag0000453 [cytosol] R-ASA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119534 Pyridoxal 5'-phosphate salvage pathway none Avena sativa AVESA.00001b.r3.4Ag0000453 R-ASA-1124490-3 AVESA.00001b.r3.4Ag0000453 [cytosol] R-ASA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119594 Pyridoxal 5'-phosphate biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0000509 R-ASA-9609343-4 AVESA.00001b.r3.4Ag0000509 [cytosol] R-ASA-9609352 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609352 Lycopene catabolism none Avena sativa AVESA.00001b.r3.4Ag0000541 R-ASA-1125839 AVESA.00001b.r3.4Ag0000541 [cytosol] R-ASA-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119386 UDP-N-acetylgalactosamine biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0000547 R-ASA-9025698 AVESA.00001b.r3.4Ag0000547 [plasma membrane] R-ASA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025727 Iron uptake and transport in root vascular system none Avena sativa AVESA.00001b.r3.4Ag0000550 R-ASA-1126593 AVESA.00001b.r3.4Ag0000550 [endosome] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.4Ag0000550 R-ASA-5679293 AVESA.00001b.r3.4Ag0000550 [plasma membrane] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.4Ag0000550 R-ASA-8858098 AVESA.00001b.r3.4Ag0000550 [plasma membrane] R-ASA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8858053 Polar auxin transport none Avena sativa AVESA.00001b.r3.4Ag0000560 R-ASA-9645907-4 AVESA.00001b.r3.4Ag0000560 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.4Ag0000560 R-ASA-9645907-4 AVESA.00001b.r3.4Ag0000560 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.4Ag0000632 R-ASA-9681886-3 AVESA.00001b.r3.4Ag0000632 [cytosol] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.4Ag0000730 R-ASA-9675807-3 AVESA.00001b.r3.4Ag0000730 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.4Ag0000730 R-ASA-9675807-3 AVESA.00001b.r3.4Ag0000730 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.4Ag0000730 R-ASA-9675807-3 AVESA.00001b.r3.4Ag0000730 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.4Ag0000738 R-ASA-6788234 AVESA.00001b.r3.4Ag0000738 [cytosol] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.4Ag0000738 R-ASA-1124041 AVESA.00001b.r3.4Ag0000738 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.4Ag0000790 R-ASA-1122242-5 AVESA.00001b.r3.4Ag0000790 [cytosol] R-ASA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119267 Phenylalanine degradation III none Avena sativa AVESA.00001b.r3.4Ag0000791 R-ASA-1122242-3 AVESA.00001b.r3.4Ag0000791 [cytosol] R-ASA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119267 Phenylalanine degradation III none Avena sativa AVESA.00001b.r3.4Ag0000803 R-ASA-5084918-2 AVESA.00001b.r3.4Ag0000803 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.4Ag0000809 R-ASA-1125307-2 AVESA.00001b.r3.4Ag0000809 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.4Ag0000868 R-ASA-1127455-3 AVESA.00001b.r3.4Ag0000868 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.4Ag0000868 R-ASA-1127455-3 AVESA.00001b.r3.4Ag0000868 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0000944 R-ASA-1129390 AVESA.00001b.r3.4Ag0000944 [mitochondrion] R-ASA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119506 tyrosine degradation I none Avena sativa AVESA.00001b.r3.4Ag0000956 R-ASA-4415055 AVESA.00001b.r3.4Ag0000956 [cytosol] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.4Ag0000956 R-ASA-4415073 phospho-AVESA.00001b.r3.4Ag0000956 [cytosol] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.4Ag0000956 R-ASA-4415055 AVESA.00001b.r3.4Ag0000956 [cytosol] R-ASA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639861 Development of root hair none Avena sativa AVESA.00001b.r3.4Ag0000961 R-ASA-1126436-4 AVESA.00001b.r3.4Ag0000961 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.4Ag0000964 R-ASA-5138500-3 AVESA.00001b.r3.4Ag0000964 [plastid stroma] R-ASA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119263 Arginine biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0000964 R-ASA-1129397-3 AVESA.00001b.r3.4Ag0000964 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0000964 R-ASA-1129397-3 AVESA.00001b.r3.4Ag0000964 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.4Ag0000964 R-ASA-1129397-3 AVESA.00001b.r3.4Ag0000964 [cytosol] R-ASA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119295 Homoserine biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0000964 R-ASA-5138500-3 AVESA.00001b.r3.4Ag0000964 [plastid stroma] R-ASA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119539 Ornithine biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0000964 R-ASA-5138500-3 AVESA.00001b.r3.4Ag0000964 [plastid stroma] R-ASA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119622 Arginine biosynthesis II (acetyl cycle) none Avena sativa AVESA.00001b.r3.4Ag0001029 R-ASA-5631953-3 AVESA.00001b.r3.4Ag0001029 [mitochondrial matrix] R-ASA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119289 Arginine degradation none Avena sativa AVESA.00001b.r3.4Ag0001029 R-ASA-1124214-3 AVESA.00001b.r3.4Ag0001029 [cytosol] R-ASA-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119318 Proline biosynthesis V (from arginine) none Avena sativa AVESA.00001b.r3.4Ag0001029 R-ASA-1124214-3 AVESA.00001b.r3.4Ag0001029 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.4Ag0001069 R-ASA-1127908 AVESA.00001b.r3.4Ag0001069 [cytosol] R-ASA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119349 S-methylmethionine cycle none Avena sativa AVESA.00001b.r3.4Ag0001069 R-ASA-1127908 AVESA.00001b.r3.4Ag0001069 [cytosol] R-ASA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119400 Methionine biosynthesis II none Avena sativa AVESA.00001b.r3.4Ag0001120 R-ASA-6788149-3 AVESA.00001b.r3.4Ag0001120 [cytosol] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.4Ag0001159 R-ASA-6787127-3 AVESA.00001b.r3.4Ag0001159 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Ag0001159 R-ASA-6787052-3 AVESA.00001b.r3.4Ag0001159 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Ag0001250 R-ASA-1124285-8 AVESA.00001b.r3.4Ag0001250 [cytosol] R-ASA-1119284 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119284 Coumarin biosynthesis (via 2-coumarate) none Avena sativa AVESA.00001b.r3.4Ag0001251 R-ASA-1124285-5 AVESA.00001b.r3.4Ag0001251 [cytosol] R-ASA-1119284 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119284 Coumarin biosynthesis (via 2-coumarate) none Avena sativa AVESA.00001b.r3.4Ag0001267 R-ASA-5679455-3 AVESA.00001b.r3.4Ag0001267 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.4Ag0001267 R-ASA-6787020-3 AVESA.00001b.r3.4Ag0001267 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Ag0001271 R-ASA-1126513 AVESA.00001b.r3.4Ag0001271 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0001288 R-ASA-5632316-3 AVESA.00001b.r3.4Ag0001288 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.4Ag0001301 R-ASA-1128632-3 AVESA.00001b.r3.4Ag0001301 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0001301 R-ASA-1128632-3 AVESA.00001b.r3.4Ag0001301 [cytosol] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0001304 R-ASA-1126971 AVESA.00001b.r3.4Ag0001304 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0001304 R-ASA-1126971 AVESA.00001b.r3.4Ag0001304 [cytosol] R-ASA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119618 13-LOX and 13-HPL pathway none Avena sativa AVESA.00001b.r3.4Ag0001306 R-ASA-1127031-2 AVESA.00001b.r3.4Ag0001306 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.4Ag0001321 R-ASA-1125460-2 AVESA.00001b.r3.4Ag0001321 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.4Ag0001321 R-ASA-1125460-2 AVESA.00001b.r3.4Ag0001321 [cytosol] R-ASA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119563 UDP-D-xylose biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0001321 R-ASA-1125460-2 AVESA.00001b.r3.4Ag0001321 [cytosol] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.4Ag0001335 R-ASA-8933842 AVESA.00001b.r3.4Ag0001335 [cytosol] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.4Ag0001335 R-ASA-8933843 AVESA.00001b.r3.4Ag0001335 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.4Ag0001357 R-ASA-9640886-3 AVESA.00001b.r3.4Ag0001357 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.4Ag0001357 R-ASA-9640886-3 AVESA.00001b.r3.4Ag0001357 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.4Ag0001359 R-ASA-9927759-2 AVESA.00001b.r3.4Ag0001359 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.4Ag0001362 R-ASA-9639012-3 AVESA.00001b.r3.4Ag0001362 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.4Ag0001367 R-ASA-9631619 AVESA.00001b.r3.4Ag0001367 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.4Ag0001368 R-ASA-1123895-3 AVESA.00001b.r3.4Ag0001368 [cytosol] R-ASA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119334 Ethylene biosynthesis from methionine none Avena sativa AVESA.00001b.r3.4Ag0001368 R-ASA-1123895-3 AVESA.00001b.r3.4Ag0001368 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.4Ag0001381 R-ASA-9035593 AVESA.00001b.r3.4Ag0001381 [cytosol] R-ASA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9035605 Regulation of seed size none Avena sativa AVESA.00001b.r3.4Ag0001381 R-ASA-9035634 AVESA.00001b.r3.4Ag0001381 [nucleoplasm] R-ASA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9035605 Regulation of seed size none Avena sativa AVESA.00001b.r3.4Ag0001381 R-ASA-9035593 AVESA.00001b.r3.4Ag0001381 [cytosol] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.4Ag0001381 R-ASA-9035634 AVESA.00001b.r3.4Ag0001381 [nucleoplasm] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.4Ag0001399 R-ASA-1128745-2 AVESA.00001b.r3.4Ag0001399 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.4Ag0001409 R-ASA-9035785 AVESA.00001b.r3.4Ag0001409 [nucleoplasm] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.4Ag0001416 R-ASA-1122398-2 AVESA.00001b.r3.4Ag0001416 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0001441 R-ASA-1125341 AVESA.00001b.r3.4Ag0001441 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.4Ag0001441 R-ASA-1125341 AVESA.00001b.r3.4Ag0001441 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0001443 R-ASA-9640783-3 AVESA.00001b.r3.4Ag0001443 [nucleoplasm] R-ASA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640760 G1 phase none Avena sativa AVESA.00001b.r3.4Ag0001453 R-ASA-8987575-3 AVESA.00001b.r3.4Ag0001453 [mitochondrial matrix] R-ASA-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119311 Glycine biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0001484 R-ASA-1128092-2 AVESA.00001b.r3.4Ag0001484 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.4Ag0001484 R-ASA-1128092-2 AVESA.00001b.r3.4Ag0001484 [nucleoplasm] R-ASA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030557 Lateral root initiation none Avena sativa AVESA.00001b.r3.4Ag0001484 R-ASA-1128092-2 AVESA.00001b.r3.4Ag0001484 [nucleoplasm] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.4Ag0001489 R-ASA-1128257-2 AVESA.00001b.r3.4Ag0001489 [plastid stroma] R-ASA-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119529 Sulfate activation for sulfonation none Avena sativa AVESA.00001b.r3.4Ag0001535 R-ASA-1126604-3 AVESA.00001b.r3.4Ag0001535 [cytosol] R-ASA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119438 Secologanin and strictosidine biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0001546 R-ASA-8934009 AVESA.00001b.r3.4Ag0001546 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.4Ag0001546 R-ASA-8934009 AVESA.00001b.r3.4Ag0001546 [nucleoplasm] R-ASA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934257 Transition from vegetative to reproductive shoot apical meristem none Avena sativa AVESA.00001b.r3.4Ag0001546 R-ASA-8934009 AVESA.00001b.r3.4Ag0001546 [nucleoplasm] R-ASA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609102 Flower development none Avena sativa AVESA.00001b.r3.4Ag0001552 R-ASA-9639171 AVESA.00001b.r3.4Ag0001552 [plant-type vacuole membrane] R-ASA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639136 Response to Aluminum stress none Avena sativa AVESA.00001b.r3.4Ag0001566 R-ASA-1125460-4 AVESA.00001b.r3.4Ag0001566 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.4Ag0001566 R-ASA-1125460-4 AVESA.00001b.r3.4Ag0001566 [cytosol] R-ASA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119563 UDP-D-xylose biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0001566 R-ASA-1125460-4 AVESA.00001b.r3.4Ag0001566 [cytosol] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.4Ag0001579 R-ASA-9640694-2 AVESA.00001b.r3.4Ag0001579 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.4Ag0001579 R-ASA-9640694-2 AVESA.00001b.r3.4Ag0001579 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.4Ag0001583 R-ASA-1125504-2 AVESA.00001b.r3.4Ag0001583 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0001583 R-ASA-1125504-2 AVESA.00001b.r3.4Ag0001583 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.4Ag0001583 R-ASA-1125504-2 AVESA.00001b.r3.4Ag0001583 [cytosol] R-ASA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119295 Homoserine biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0001583 R-ASA-5606489-2 AVESA.00001b.r3.4Ag0001583 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.4Ag0001601 R-ASA-8933816-3 AVESA.00001b.r3.4Ag0001601 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.4Ag0001688 R-ASA-1123404-2 AVESA.00001b.r3.4Ag0001688 [peroxisomal matrix] R-ASA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119407 Ureide biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0001692 R-ASA-1124484-2 AVESA.00001b.r3.4Ag0001692 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.4Ag0001697 R-ASA-5632110 AVESA.00001b.r3.4Ag0001697 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.4Ag0001697 R-ASA-5632110 AVESA.00001b.r3.4Ag0001697 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.4Ag0001721 R-ASA-1124984 AVESA.00001b.r3.4Ag0001721 [cytosol] R-ASA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119596 Glutamate biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0001741 R-ASA-1250418 AVESA.00001b.r3.4Ag0001741 [cytosol] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0001741 R-ASA-1129305 AVESA.00001b.r3.4Ag0001741 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0001746 R-ASA-9675838-2 AVESA.00001b.r3.4Ag0001746 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.4Ag0001778 R-ASA-2685738-3 AVESA.00001b.r3.4Ag0001778 [cytosol] R-ASA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119580 IAA biosynthesis II none Avena sativa AVESA.00001b.r3.4Ag0001784 R-ASA-1128191 AVESA.00001b.r3.4Ag0001784 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0001833 R-ASA-1128553-2 AVESA.00001b.r3.4Ag0001833 [cytosol] R-ASA-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Avena sativa AVESA.00001b.r3.4Ag0001833 R-ASA-1128553-2 AVESA.00001b.r3.4Ag0001833 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0001833 R-ASA-1128553-2 AVESA.00001b.r3.4Ag0001833 [cytosol] R-ASA-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119439 Cholesterol biosynthesis III (via desmosterol) none Avena sativa AVESA.00001b.r3.4Ag0001833 R-ASA-1128553-2 AVESA.00001b.r3.4Ag0001833 [cytosol] R-ASA-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119559 Cholesterol biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0001836 R-ASA-5632241-3 AVESA.00001b.r3.4Ag0001836 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.4Ag0001857 R-ASA-1130084-2 AVESA.00001b.r3.4Ag0001857 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0001867 R-ASA-1122861 AVESA.00001b.r3.4Ag0001867 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0001884 R-ASA-1250417 AVESA.00001b.r3.4Ag0001884 [cytosol] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0001924 R-ASA-9608682-3 AVESA.00001b.r3.4Ag0001924 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.4Ag0001924 R-ASA-9608682-3 AVESA.00001b.r3.4Ag0001924 [nucleoplasm] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.4Ag0001924 R-ASA-9608606-3 AVESA.00001b.r3.4Ag0001924 [cytosol] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.4Ag0001928 R-ASA-1124274-2 AVESA.00001b.r3.4Ag0001928 [cytosol] R-ASA-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119513 Pinobanksin biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0001928 R-ASA-1124274-2 AVESA.00001b.r3.4Ag0001928 [cytosol] R-ASA-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119531 Flavonoid biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0001976 R-ASA-1123751-3 AVESA.00001b.r3.4Ag0001976 [cytosol] R-ASA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119292 Cytokinins 7-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0001976 R-ASA-1123751-3 AVESA.00001b.r3.4Ag0001976 [cytosol] R-ASA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119375 Cytokinins 9-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0001976 R-ASA-1123751-3 AVESA.00001b.r3.4Ag0001976 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0001982 R-ASA-8986695 AVESA.00001b.r3.4Ag0001982 [endoplasmic reticulum membrane] R-ASA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8986768 Anther and pollen development none Avena sativa AVESA.00001b.r3.4Ag0001990 R-ASA-1128656-3 AVESA.00001b.r3.4Ag0001990 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002000 R-ASA-9639016-3 AVESA.00001b.r3.4Ag0002000 [cytosol] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002000 R-ASA-9639016-3 AVESA.00001b.r3.4Ag0002000 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.4Ag0002034 R-ASA-1129507-3 AVESA.00001b.r3.4Ag0002034 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.4Ag0002054 R-ASA-9626474 AVESA.00001b.r3.4Ag0002054 [trans-Golgi network membrane] R-ASA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9626305 Regulatory network of nutrient accumulation none Avena sativa AVESA.00001b.r3.4Ag0002119 R-ASA-5632129-2 AVESA.00001b.r3.4Ag0002119 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.4Ag0002136 R-ASA-1126714-2 AVESA.00001b.r3.4Ag0002136 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0002136 R-ASA-1126714-2 AVESA.00001b.r3.4Ag0002136 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.4Ag0002136 R-ASA-1126714-2 AVESA.00001b.r3.4Ag0002136 [cytosol] R-ASA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119295 Homoserine biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002136 R-ASA-5606484-2 AVESA.00001b.r3.4Ag0002136 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.4Ag0002147 R-ASA-1123662 AVESA.00001b.r3.4Ag0002147 [plastid stroma] R-ASA-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119308 Momilactone biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002172 R-ASA-1126091-2 AVESA.00001b.r3.4Ag0002172 [cytosol] R-ASA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119394 Pantothenate and coenzyme A biosynthesis III none Avena sativa AVESA.00001b.r3.4Ag0002172 R-ASA-1126091-2 AVESA.00001b.r3.4Ag0002172 [cytosol] R-ASA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119496 Pantothenate biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0002172 R-ASA-1126091-2 AVESA.00001b.r3.4Ag0002172 [cytosol] R-ASA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119544 Pantothenate biosynthesis II none Avena sativa AVESA.00001b.r3.4Ag0002172 R-ASA-1126091-2 AVESA.00001b.r3.4Ag0002172 [cytosol] R-ASA-1119568 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119568 Pantothenate biosynthesis III none Avena sativa AVESA.00001b.r3.4Ag0002233 R-ASA-6787180 AVESA.00001b.r3.4Ag0002233 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Ag0002233 R-ASA-6787152 AVESA.00001b.r3.4Ag0002233 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Ag0002237 R-ASA-1123433-3 AVESA.00001b.r3.4Ag0002237 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002237 R-ASA-1123433-3 AVESA.00001b.r3.4Ag0002237 [cytosol] R-ASA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119618 13-LOX and 13-HPL pathway none Avena sativa AVESA.00001b.r3.4Ag0002261 R-ASA-9826642 LAZY1 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.4Ag0002261 R-ASA-9826622 LAZY1 [plasma membrane] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.4Ag0002261 R-ASA-9826642 LAZY1 [nucleoplasm] R-ASA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924451 Shoot (tiller) formation and regulation of tiller angle none Avena sativa AVESA.00001b.r3.4Ag0002261 R-ASA-9826622 LAZY1 [plasma membrane] R-ASA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924451 Shoot (tiller) formation and regulation of tiller angle none Avena sativa AVESA.00001b.r3.4Ag0002284 R-ASA-1122934 AVESA.00001b.r3.4Ag0002284 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.4Ag0002292 R-ASA-5632205-3 AVESA.00001b.r3.4Ag0002292 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.4Ag0002304 R-ASA-1127299-4 AVESA.00001b.r3.4Ag0002304 [cytosol] R-ASA-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119298 Glutathione redox reactions II none Avena sativa AVESA.00001b.r3.4Ag0002304 R-ASA-1127299-4 AVESA.00001b.r3.4Ag0002304 [cytosol] R-ASA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119437 Glutathione redox reactions I none Avena sativa AVESA.00001b.r3.4Ag0002312 R-ASA-9924379-2 HSFA2D [nucleoplasm] R-ASA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924451 Shoot (tiller) formation and regulation of tiller angle none Avena sativa AVESA.00001b.r3.4Ag0002368 R-ASA-9645947 AVESA.00001b.r3.4Ag0002368 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.4Ag0002368 R-ASA-9645947 AVESA.00001b.r3.4Ag0002368 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.4Ag0002368 R-ASA-9645947 AVESA.00001b.r3.4Ag0002368 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.4Ag0002368 R-ASA-9645947 AVESA.00001b.r3.4Ag0002368 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.4Ag0002368 R-ASA-9645947 AVESA.00001b.r3.4Ag0002368 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.4Ag0002391 R-ASA-1123470-2 AVESA.00001b.r3.4Ag0002391 [cytosol] R-ASA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119292 Cytokinins 7-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002391 R-ASA-1123470-2 AVESA.00001b.r3.4Ag0002391 [cytosol] R-ASA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119375 Cytokinins 9-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002391 R-ASA-1123470-2 AVESA.00001b.r3.4Ag0002391 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002392 R-ASA-5655057 AVESA.00001b.r3.4Ag0002392 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002437 R-ASA-1130136-3 AVESA.00001b.r3.4Ag0002437 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.4Ag0002437 R-ASA-1130136-3 AVESA.00001b.r3.4Ag0002437 [mitochondrial matrix] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002444 R-ASA-1127899 AVESA.00001b.r3.4Ag0002444 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002452 R-ASA-1128263-2 AVESA.00001b.r3.4Ag0002452 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0002453 R-ASA-1128641-2 AVESA.00001b.r3.4Ag0002453 [cytosol] R-ASA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119331 Cysteine biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0002454 R-ASA-1250418-2 AVESA.00001b.r3.4Ag0002454 [cytosol] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002454 R-ASA-1129305-2 AVESA.00001b.r3.4Ag0002454 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0002458 R-ASA-9025492 AVESA.00001b.r3.4Ag0002458 [endoplasmic reticulum membrane] R-ASA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119325 Sphingolipid metabolism none Avena sativa AVESA.00001b.r3.4Ag0002458 R-ASA-1126933 AVESA.00001b.r3.4Ag0002458 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.4Ag0002462 R-ASA-9611526 CEBiP [plasma membrane] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.4Ag0002501 R-ASA-1126728-3 AVESA.00001b.r3.4Ag0002501 [plastid stroma] R-ASA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119424 Plastid glycolysis none Avena sativa AVESA.00001b.r3.4Ag0002511 R-ASA-9675876-3 AVESA.00001b.r3.4Ag0002511 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.4Ag0002511 R-ASA-9675876-3 AVESA.00001b.r3.4Ag0002511 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.4Ag0002511 R-ASA-9675876-3 AVESA.00001b.r3.4Ag0002511 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.4Ag0002517 R-ASA-1125494-2 AVESA.00001b.r3.4Ag0002517 [endoplasmic reticulum membrane] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0002530 R-ASA-1126238 AVESA.00001b.r3.4Ag0002530 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002585 R-ASA-1128328-3 AVESA.00001b.r3.4Ag0002585 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.4Ag0002595 R-ASA-1125834-3 AVESA.00001b.r3.4Ag0002595 [cytosol] R-ASA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119379 Flavin biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002597 R-ASA-1129478 AVESA.00001b.r3.4Ag0002597 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0002597 R-ASA-1129478 AVESA.00001b.r3.4Ag0002597 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.4Ag0002597 R-ASA-5606483 AVESA.00001b.r3.4Ag0002597 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.4Ag0002614 R-ASA-1126671 AVESA.00001b.r3.4Ag0002614 [cytosol] R-ASA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119534 Pyridoxal 5'-phosphate salvage pathway none Avena sativa AVESA.00001b.r3.4Ag0002614 R-ASA-1126671 AVESA.00001b.r3.4Ag0002614 [cytosol] R-ASA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119594 Pyridoxal 5'-phosphate biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002643 R-ASA-1125194 AVESA.00001b.r3.4Ag0002643 [cytosol] R-ASA-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119484 Folate polyglutamylation II none Avena sativa AVESA.00001b.r3.4Ag0002643 R-ASA-1125194 AVESA.00001b.r3.4Ag0002643 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.4Ag0002643 R-ASA-1125194 AVESA.00001b.r3.4Ag0002643 [cytosol] R-ASA-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119617 Folate polyglutamylation I none Avena sativa AVESA.00001b.r3.4Ag0002677 R-ASA-9618139-2 AVESA.00001b.r3.4Ag0002677 [plasma membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.4Ag0002729 R-ASA-1127338-2 AVESA.00001b.r3.4Ag0002729 [mitochondrial inner membrane] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0002737 R-ASA-6786908 AVESA.00001b.r3.4Ag0002737 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Ag0002737 R-ASA-6786908 AVESA.00001b.r3.4Ag0002737 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.4Ag0002758 R-ASA-9766833-2 AVESA.00001b.r3.4Ag0002758 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.4Ag0002760 R-ASA-1123787-2 AVESA.00001b.r3.4Ag0002760 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002760 R-ASA-1123787-2 AVESA.00001b.r3.4Ag0002760 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.4Ag0002770 R-ASA-8868904-2 AVESA.00001b.r3.4Ag0002770 [endoplasmic reticulum membrane] R-ASA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8868949 Intracellular auxin transport none Avena sativa AVESA.00001b.r3.4Ag0002778 R-ASA-6788072 AVESA.00001b.r3.4Ag0002778 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.4Ag0002802 R-ASA-9608678-3 AVESA.00001b.r3.4Ag0002802 [cytosol] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.4Ag0002802 R-ASA-8986843-3 AVESA.00001b.r3.4Ag0002802 [nucleoplasm] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.4Ag0002821 R-ASA-6788041-3 AVESA.00001b.r3.4Ag0002821 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.4Ag0002822 R-ASA-1127373 AVESA.00001b.r3.4Ag0002822 [cytosol] R-ASA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119297 Beta-alanine biosynthesis III none Avena sativa AVESA.00001b.r3.4Ag0002825 R-ASA-1129600-2 AVESA.00001b.r3.4Ag0002825 [cytosol] R-ASA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119407 Ureide biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002845 R-ASA-9681915 AVESA.00001b.r3.4Ag0002845 [Golgi membrane] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.4Ag0002846 R-ASA-1250419-5 AVESA.00001b.r3.4Ag0002846 [cytosol] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002846 R-ASA-1129637-5 AVESA.00001b.r3.4Ag0002846 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0002847 R-ASA-1250419-2 AVESA.00001b.r3.4Ag0002847 [cytosol] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002847 R-ASA-1129637-2 AVESA.00001b.r3.4Ag0002847 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0002848 R-ASA-1250419-8 AVESA.00001b.r3.4Ag0002848 [cytosol] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002848 R-ASA-1129637-8 AVESA.00001b.r3.4Ag0002848 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0002849 R-ASA-4723690 AVESA.00001b.r3.4Ag0002849 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.4Ag0002860 R-ASA-5654913 AVESA.00001b.r3.4Ag0002860 [Golgi lumen] R-ASA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654909 Xylan biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002873 R-ASA-8853988-2 Phosphatidylglycerophosphatase [mitochondrial matrix] R-ASA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119260 Cardiolipin biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002886 R-ASA-1127999 AVESA.00001b.r3.4Ag0002886 [mitochondrial inner membrane] R-ASA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119260 Cardiolipin biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002927 R-ASA-1127318-2 AVESA.00001b.r3.4Ag0002927 [cytosol] R-ASA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002927 R-ASA-1127318-2 AVESA.00001b.r3.4Ag0002927 [cytosol] R-ASA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119438 Secologanin and strictosidine biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0002927 R-ASA-1127318-2 AVESA.00001b.r3.4Ag0002927 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0003028 R-ASA-1130202-2 AVESA.00001b.r3.4Ag0003028 [cytosol] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0003057 R-ASA-5149683-2 AVESA.00001b.r3.4Ag0003057 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.4Ag0003065 R-ASA-6787181-2 AVESA.00001b.r3.4Ag0003065 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Ag0003073 R-ASA-8858070 AVESA.00001b.r3.4Ag0003073 [plasma membrane] R-ASA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639861 Development of root hair none Avena sativa AVESA.00001b.r3.4Ag0003089 R-ASA-6787863-2 AVESA.00001b.r3.4Ag0003089 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.4Ag0003107 R-ASA-1124453-2 AVESA.00001b.r3.4Ag0003107 [peroxisomal matrix] R-ASA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119407 Ureide biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0003128 R-ASA-9645950-2 AVESA.00001b.r3.4Ag0003128 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.4Ag0003128 R-ASA-9645950-2 AVESA.00001b.r3.4Ag0003128 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.4Ag0003128 R-ASA-9645950-2 AVESA.00001b.r3.4Ag0003128 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.4Ag0003128 R-ASA-9645950-2 AVESA.00001b.r3.4Ag0003128 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.4Ag0003128 R-ASA-9645950-2 AVESA.00001b.r3.4Ag0003128 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.4Ag0003189 R-ASA-1125834-6 AVESA.00001b.r3.4Ag0003189 [cytosol] R-ASA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119379 Flavin biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0003217 R-ASA-9930308-3 SNAC2 (OsNAC6) [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.4Ag0003219 R-ASA-9675790-3 AVESA.00001b.r3.4Ag0003219 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.4Ag0003231 R-ASA-1124242 AVESA.00001b.r3.4Ag0003231 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.4Ag0003275 R-ASA-9639789 AVESA.00001b.r3.4Ag0003275 [plasma membrane] R-ASA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639861 Development of root hair none Avena sativa AVESA.00001b.r3.4Ag0003282 R-ASA-9675297-3 AVESA.00001b.r3.4Ag0003282 [mitochondrion] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.4Ag0003319 R-ASA-5149646-3 AVESA.00001b.r3.4Ag0003319 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.4Ag0003319 R-ASA-1126652-3 AVESA.00001b.r3.4Ag0003319 [cytosol] R-ASA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119570 Cytosolic glycolysis none Avena sativa AVESA.00001b.r3.4Ag0003375 R-ASA-9025712-3 AVESA.00001b.r3.4Ag0003375 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0003416 R-ASA-9675500-2 AVESA.00001b.r3.4Ag0003416 [endoplasmic reticulum membrane] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.4Ag0003419 R-ASA-1128463-2 AVESA.00001b.r3.4Ag0003419 [cytosol] R-ASA-1119550 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119550 Gentiodelphin biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0003421 R-ASA-1128463-5 AVESA.00001b.r3.4Ag0003421 [cytosol] R-ASA-1119550 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119550 Gentiodelphin biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0003459 R-ASA-1123690-3 AVESA.00001b.r3.4Ag0003459 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.4Ag0003460 R-ASA-1125452 AVESA.00001b.r3.4Ag0003460 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0003460 R-ASA-1125452 AVESA.00001b.r3.4Ag0003460 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.4Ag0003460 R-ASA-1125452 AVESA.00001b.r3.4Ag0003460 [cytosol] R-ASA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119295 Homoserine biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0003460 R-ASA-5606511 AVESA.00001b.r3.4Ag0003460 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.4Ag0003461 R-ASA-8879006-3 AVESA.00001b.r3.4Ag0003461 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.4Ag0003464 R-ASA-9025492-5 AVESA.00001b.r3.4Ag0003464 [endoplasmic reticulum membrane] R-ASA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119325 Sphingolipid metabolism none Avena sativa AVESA.00001b.r3.4Ag0003464 R-ASA-1126933-5 AVESA.00001b.r3.4Ag0003464 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.4Ag0003491 R-ASA-1127527 AVESA.00001b.r3.4Ag0003491 [cytosol] R-ASA-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Avena sativa AVESA.00001b.r3.4Ag0003516 R-ASA-1173282 AVESA.00001b.r3.4Ag0003516 [mitochondrial inner membrane] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.4Ag0003604 R-ASA-5631958-2 AVESA.00001b.r3.4Ag0003604 [cytosol] R-ASA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119289 Arginine degradation none Avena sativa AVESA.00001b.r3.4Ag0003604 R-ASA-1122345-2 AVESA.00001b.r3.4Ag0003604 [cytosol] R-ASA-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119318 Proline biosynthesis V (from arginine) none Avena sativa AVESA.00001b.r3.4Ag0003604 R-ASA-1122345-2 AVESA.00001b.r3.4Ag0003604 [cytosol] R-ASA-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119631 Proline biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0003676 R-ASA-1127597-3 AVESA.00001b.r3.4Ag0003676 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.4Ag0003699 R-ASA-1126488-3 AVESA.00001b.r3.4Ag0003699 [mitochondrial inner membrane] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0003722 R-ASA-1126955 AVESA.00001b.r3.4Ag0003722 [plastid] R-ASA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119407 Ureide biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0003738 R-ASA-2685730-6 AVESA.00001b.r3.4Ag0003738 [cytosol] R-ASA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119580 IAA biosynthesis II none Avena sativa AVESA.00001b.r3.4Ag0003739 R-ASA-2685730 AVESA.00001b.r3.4Ag0003739 [cytosol] R-ASA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119580 IAA biosynthesis II none Avena sativa AVESA.00001b.r3.4Ag0003740 R-ASA-2685730-2 AVESA.00001b.r3.4Ag0003740 [cytosol] R-ASA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119580 IAA biosynthesis II none Avena sativa AVESA.00001b.r3.4Ag0003747 R-ASA-8858194-4 AVESA.00001b.r3.4Ag0003747 [cytosol] R-ASA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119556 Choline biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0003780 R-ASA-1126436-5 AVESA.00001b.r3.4Ag0003780 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.4Ag0003795 R-ASA-1124560-2 AVESA.00001b.r3.4Ag0003795 [cytosol] R-ASA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119563 UDP-D-xylose biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0003795 R-ASA-9681903-2 AVESA.00001b.r3.4Ag0003795 [Golgi lumen] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.4Ag0003795 R-ASA-1124560-2 AVESA.00001b.r3.4Ag0003795 [cytosol] R-ASA-5654894 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654894 UDP-D-apiose biosynthesis none Avena sativa AVESA.00001b.r3.4Ag0003882 R-ASA-9766887 AVESA.00001b.r3.4Ag0003882 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.4Ag0003895 R-ASA-9025351 AVESA.00001b.r3.4Ag0003895 [cytosol] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.4Ag0003901 R-ASA-8868990 AVESA.00001b.r3.4Ag0003901 [endoplasmic reticulum membrane] R-ASA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8868949 Intracellular auxin transport none Avena sativa AVESA.00001b.r3.4Cg0000013 R-ASA-1127324-3 AVESA.00001b.r3.4Cg0000013 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.4Cg0000030 R-ASA-1127752-2 AVESA.00001b.r3.4Cg0000030 [cytosol] R-ASA-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119417 Stachyose biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0000031 R-ASA-1127599 AVESA.00001b.r3.4Cg0000031 [cytosol] R-ASA-1119388 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119388 IAA biosynthesis VI (via indole-3-acetamide) none Avena sativa AVESA.00001b.r3.4Cg0000045 R-ASA-9640718-3 AVESA.00001b.r3.4Cg0000045 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.4Cg0000059 R-ASA-1126344 AVESA.00001b.r3.4Cg0000059 [plastid stroma] R-ASA-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119529 Sulfate activation for sulfonation none Avena sativa AVESA.00001b.r3.4Cg0000075 R-ASA-5631969 AVESA.00001b.r3.4Cg0000075 [mitochondrial matrix] R-ASA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119289 Arginine degradation none Avena sativa AVESA.00001b.r3.4Cg0000075 R-ASA-5633275 AVESA.00001b.r3.4Cg0000075 [cytosol] R-ASA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119495 Citrulline biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0000076 R-ASA-1126998 AVESA.00001b.r3.4Cg0000076 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.4Cg0000092 R-ASA-5654942-3 AVESA.00001b.r3.4Cg0000092 [Golgi lumen] R-ASA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654909 Xylan biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0000095 R-ASA-1128606-3 AVESA.00001b.r3.4Cg0000095 [mitochondrial matrix] R-ASA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119365 Lysine degradation II none Avena sativa AVESA.00001b.r3.4Cg0000095 R-ASA-1173244-3 AVESA.00001b.r3.4Cg0000095 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.4Cg0000118 R-ASA-9609569 AVESA.00001b.r3.4Cg0000118 [cytosol] R-ASA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609573 Tricin biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0000181 R-ASA-1122373-6 AVESA.00001b.r3.4Cg0000181 [cytosol] R-ASA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119304 Putrescine biosynthesis II none Avena sativa AVESA.00001b.r3.4Cg0000181 R-ASA-1122373-6 AVESA.00001b.r3.4Cg0000181 [cytosol] R-ASA-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119447 Putrescine biosynthesis I none Avena sativa AVESA.00001b.r3.4Cg0000184 R-ASA-8987531-3 AVESA.00001b.r3.4Cg0000184 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.4Cg0000184 R-ASA-1125951-3 AVESA.00001b.r3.4Cg0000184 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.4Cg0000185 R-ASA-8987531-13 AVESA.00001b.r3.4Cg0000185 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.4Cg0000185 R-ASA-1125951-13 AVESA.00001b.r3.4Cg0000185 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.4Cg0000186 R-ASA-8987531-12 AVESA.00001b.r3.4Cg0000186 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.4Cg0000186 R-ASA-1125951-12 AVESA.00001b.r3.4Cg0000186 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.4Cg0000187 R-ASA-8987531-4 AVESA.00001b.r3.4Cg0000187 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.4Cg0000187 R-ASA-1125951-4 AVESA.00001b.r3.4Cg0000187 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.4Cg0000188 R-ASA-8987531-6 AVESA.00001b.r3.4Cg0000188 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.4Cg0000188 R-ASA-1125951-6 AVESA.00001b.r3.4Cg0000188 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.4Cg0000189 R-ASA-8987531-24 AVESA.00001b.r3.4Cg0000189 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.4Cg0000189 R-ASA-1125951-24 AVESA.00001b.r3.4Cg0000189 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.4Cg0000190 R-ASA-8987531-17 AVESA.00001b.r3.4Cg0000190 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.4Cg0000190 R-ASA-1125951-17 AVESA.00001b.r3.4Cg0000190 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.4Cg0000206 R-ASA-9618112-2 AVESA.00001b.r3.4Cg0000206 [plasma membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.4Cg0000236 R-ASA-1127509-3 AVESA.00001b.r3.4Cg0000236 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.4Cg0000293 R-ASA-1123087 AVESA.00001b.r3.4Cg0000293 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0000310 R-ASA-6787018-2 AVESA.00001b.r3.4Cg0000310 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Cg0000319 R-ASA-9927865 AVESA.00001b.r3.4Cg0000319 [nucleoplasm] R-ASA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934257 Transition from vegetative to reproductive shoot apical meristem none Avena sativa AVESA.00001b.r3.4Cg0000322 R-ASA-6788050-3 AVESA.00001b.r3.4Cg0000322 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.4Cg0000330 R-ASA-9025758 AVESA.00001b.r3.4Cg0000330 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0000344 R-ASA-1124234 AVESA.00001b.r3.4Cg0000344 [cytosol] R-ASA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119436 Peptidoglycan biosynthesis I none Avena sativa AVESA.00001b.r3.4Cg0000352 R-ASA-1125275-2 AVESA.00001b.r3.4Cg0000352 [cytosol] R-ASA-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119629 Thiamine biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0000370 R-ASA-1129616-2 AVESA.00001b.r3.4Cg0000370 [cytosol] R-ASA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119300 Glycolipid desaturation none Avena sativa AVESA.00001b.r3.4Cg0000381 R-ASA-1126883-2 AVESA.00001b.r3.4Cg0000381 [cytosol] R-ASA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119389 Phenylalanine biosynthesis I none Avena sativa AVESA.00001b.r3.4Cg0000383 R-ASA-8933718-2 AVESA.00001b.r3.4Cg0000383 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.4Cg0000383 R-ASA-8933718-2 AVESA.00001b.r3.4Cg0000383 [nucleoplasm] R-ASA-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928946 Drought escape (DE) via ABA-independent pathway none Avena sativa AVESA.00001b.r3.4Cg0000389 R-ASA-1129818 AVESA.00001b.r3.4Cg0000389 [mitochondrial matrix] R-ASA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119365 Lysine degradation II none Avena sativa AVESA.00001b.r3.4Cg0000389 R-ASA-1173242 AVESA.00001b.r3.4Cg0000389 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.4Cg0000422 R-ASA-1124206-3 AVESA.00001b.r3.4Cg0000422 [cytosol] R-ASA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119403 Removal of superoxide radicals none Avena sativa AVESA.00001b.r3.4Cg0000422 R-ASA-1124206-3 AVESA.00001b.r3.4Cg0000422 [cytosol] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.4Cg0000438 R-ASA-1123477-2 AVESA.00001b.r3.4Cg0000438 [cytosol] R-ASA-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119451 Xylose degradation none Avena sativa AVESA.00001b.r3.4Cg0000449 R-ASA-1129311-3 AVESA.00001b.r3.4Cg0000449 [cytosol] R-ASA-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0000461 R-ASA-9618057-2 AVESA.00001b.r3.4Cg0000461 [cytosol] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.4Cg0000468 R-ASA-5603891-3 AVESA.00001b.r3.4Cg0000468 [plastid stroma] R-ASA-1119420 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119420 Glutamate biosynthesis V none Avena sativa AVESA.00001b.r3.4Cg0000468 R-ASA-1125410-3 AVESA.00001b.r3.4Cg0000468 [chloroplast stroma] R-ASA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119443 Ammonia assimilation cycle none Avena sativa AVESA.00001b.r3.4Cg0000472 R-ASA-9611465 AVESA.00001b.r3.4Cg0000472 [nucleoplasm] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.4Cg0000472 R-ASA-9611445 AVESA.00001b.r3.4Cg0000472 [nucleoplasm] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.4Cg0000564 R-ASA-1130302 AVESA.00001b.r3.4Cg0000564 [cytosol] R-ASA-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119451 Xylose degradation none Avena sativa AVESA.00001b.r3.4Cg0000664 R-ASA-8987535 AVESA.00001b.r3.4Cg0000664 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.4Cg0000695 R-ASA-1122845 AVESA.00001b.r3.4Cg0000695 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0000727 R-ASA-1130222-2 AVESA.00001b.r3.4Cg0000727 [cytosol] R-ASA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119596 Glutamate biosynthesis I none Avena sativa AVESA.00001b.r3.4Cg0000736 R-ASA-5679443-3 AVESA.00001b.r3.4Cg0000736 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.4Cg0000736 R-ASA-5679443-3 AVESA.00001b.r3.4Cg0000736 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Cg0000736 R-ASA-6787090-3 AVESA.00001b.r3.4Cg0000736 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Cg0000746 R-ASA-1123534 AVESA.00001b.r3.4Cg0000746 [cytosol] R-ASA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119438 Secologanin and strictosidine biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0000778 R-ASA-9681895-2 AVESA.00001b.r3.4Cg0000778 [Golgi membrane] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.4Cg0000791 R-ASA-6787141-2 AVESA.00001b.r3.4Cg0000791 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Cg0000805 R-ASA-1128974-4 AVESA.00001b.r3.4Cg0000805 [cytosol] R-ASA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119287 Vitamin E biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0000805 R-ASA-1128974-4 AVESA.00001b.r3.4Cg0000805 [cytosol] R-ASA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119506 tyrosine degradation I none Avena sativa AVESA.00001b.r3.4Cg0000807 R-ASA-1127076-3 AVESA.00001b.r3.4Cg0000807 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0000807 R-ASA-1127076-3 AVESA.00001b.r3.4Cg0000807 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.4Cg0000808 R-ASA-1127338 AVESA.00001b.r3.4Cg0000808 [mitochondrial inner membrane] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.4Cg0000844 R-ASA-1126113 AVESA.00001b.r3.4Cg0000844 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.4Cg0000844 R-ASA-1126113 AVESA.00001b.r3.4Cg0000844 [cytosol] R-ASA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119496 Pantothenate biosynthesis I none Avena sativa AVESA.00001b.r3.4Cg0000844 R-ASA-1126113 AVESA.00001b.r3.4Cg0000844 [cytosol] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0000844 R-ASA-1126113 AVESA.00001b.r3.4Cg0000844 [cytosol] R-ASA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119544 Pantothenate biosynthesis II none Avena sativa AVESA.00001b.r3.4Cg0000851 R-ASA-9618139 AVESA.00001b.r3.4Cg0000851 [plasma membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.4Cg0000885 R-ASA-1125194-3 AVESA.00001b.r3.4Cg0000885 [cytosol] R-ASA-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119484 Folate polyglutamylation II none Avena sativa AVESA.00001b.r3.4Cg0000885 R-ASA-1125194-3 AVESA.00001b.r3.4Cg0000885 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.4Cg0000885 R-ASA-1125194-3 AVESA.00001b.r3.4Cg0000885 [cytosol] R-ASA-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119617 Folate polyglutamylation I none Avena sativa AVESA.00001b.r3.4Cg0000914 R-ASA-1126671-3 AVESA.00001b.r3.4Cg0000914 [cytosol] R-ASA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119534 Pyridoxal 5'-phosphate salvage pathway none Avena sativa AVESA.00001b.r3.4Cg0000914 R-ASA-1126671-3 AVESA.00001b.r3.4Cg0000914 [cytosol] R-ASA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119594 Pyridoxal 5'-phosphate biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0000933 R-ASA-1125834 AVESA.00001b.r3.4Cg0000933 [cytosol] R-ASA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119379 Flavin biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0000943 R-ASA-1128328-2 AVESA.00001b.r3.4Cg0000943 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.4Cg0000972 R-ASA-8934063-2 AVESA.00001b.r3.4Cg0000972 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.4Cg0000972 R-ASA-8934063-2 AVESA.00001b.r3.4Cg0000972 [nucleoplasm] R-ASA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934108 Short day regulated expression of florigens none Avena sativa AVESA.00001b.r3.4Cg0000972 R-ASA-8934063-2 AVESA.00001b.r3.4Cg0000972 [nucleoplasm] R-ASA-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928946 Drought escape (DE) via ABA-independent pathway none Avena sativa AVESA.00001b.r3.4Cg0000994 R-ASA-1126238-2 AVESA.00001b.r3.4Cg0000994 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0001004 R-ASA-1125494-5 AVESA.00001b.r3.4Cg0001004 [endoplasmic reticulum membrane] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.4Cg0001010 R-ASA-9675876 AVESA.00001b.r3.4Cg0001010 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.4Cg0001010 R-ASA-9675876 AVESA.00001b.r3.4Cg0001010 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.4Cg0001010 R-ASA-9675876 AVESA.00001b.r3.4Cg0001010 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.4Cg0001022 R-ASA-1126728-2 AVESA.00001b.r3.4Cg0001022 [plastid stroma] R-ASA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119424 Plastid glycolysis none Avena sativa AVESA.00001b.r3.4Cg0001057 R-ASA-9611526-2 CEBiP [plasma membrane] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.4Cg0001062 R-ASA-1250418-6 AVESA.00001b.r3.4Cg0001062 [cytosol] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0001062 R-ASA-1129305-6 AVESA.00001b.r3.4Cg0001062 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.4Cg0001063 R-ASA-1128641-3 AVESA.00001b.r3.4Cg0001063 [cytosol] R-ASA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119331 Cysteine biosynthesis I none Avena sativa AVESA.00001b.r3.4Cg0001064 R-ASA-1128263-3 AVESA.00001b.r3.4Cg0001064 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.4Cg0001071 R-ASA-1127899-4 AVESA.00001b.r3.4Cg0001071 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0001075 R-ASA-1130136-2 AVESA.00001b.r3.4Cg0001075 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.4Cg0001075 R-ASA-1130136-2 AVESA.00001b.r3.4Cg0001075 [mitochondrial matrix] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0001128 R-ASA-5655057-3 AVESA.00001b.r3.4Cg0001128 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0001129 R-ASA-1123470-3 AVESA.00001b.r3.4Cg0001129 [cytosol] R-ASA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119292 Cytokinins 7-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0001129 R-ASA-1123470-3 AVESA.00001b.r3.4Cg0001129 [cytosol] R-ASA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119375 Cytokinins 9-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0001129 R-ASA-1123470-3 AVESA.00001b.r3.4Cg0001129 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0001150 R-ASA-9645947-3 AVESA.00001b.r3.4Cg0001150 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.4Cg0001150 R-ASA-9645947-3 AVESA.00001b.r3.4Cg0001150 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.4Cg0001150 R-ASA-9645947-3 AVESA.00001b.r3.4Cg0001150 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.4Cg0001150 R-ASA-9645947-3 AVESA.00001b.r3.4Cg0001150 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.4Cg0001150 R-ASA-9645947-3 AVESA.00001b.r3.4Cg0001150 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.4Cg0001212 R-ASA-9924379-3 HSFA2D [nucleoplasm] R-ASA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924451 Shoot (tiller) formation and regulation of tiller angle none Avena sativa AVESA.00001b.r3.4Cg0001221 R-ASA-1127299 AVESA.00001b.r3.4Cg0001221 [cytosol] R-ASA-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119298 Glutathione redox reactions II none Avena sativa AVESA.00001b.r3.4Cg0001221 R-ASA-1127299 AVESA.00001b.r3.4Cg0001221 [cytosol] R-ASA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119437 Glutathione redox reactions I none Avena sativa AVESA.00001b.r3.4Cg0001232 R-ASA-1127299-3 AVESA.00001b.r3.4Cg0001232 [cytosol] R-ASA-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119298 Glutathione redox reactions II none Avena sativa AVESA.00001b.r3.4Cg0001232 R-ASA-1127299-3 AVESA.00001b.r3.4Cg0001232 [cytosol] R-ASA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119437 Glutathione redox reactions I none Avena sativa AVESA.00001b.r3.4Cg0001246 R-ASA-5632205 AVESA.00001b.r3.4Cg0001246 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.4Cg0001255 R-ASA-1122934-2 AVESA.00001b.r3.4Cg0001255 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.4Cg0001280 R-ASA-9826642-2 LAZY1 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.4Cg0001280 R-ASA-9826622-2 LAZY1 [plasma membrane] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.4Cg0001280 R-ASA-9826642-2 LAZY1 [nucleoplasm] R-ASA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924451 Shoot (tiller) formation and regulation of tiller angle none Avena sativa AVESA.00001b.r3.4Cg0001280 R-ASA-9826622-2 LAZY1 [plasma membrane] R-ASA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924451 Shoot (tiller) formation and regulation of tiller angle none Avena sativa AVESA.00001b.r3.4Cg0001301 R-ASA-1123433-2 AVESA.00001b.r3.4Cg0001301 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0001301 R-ASA-1123433-2 AVESA.00001b.r3.4Cg0001301 [cytosol] R-ASA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119618 13-LOX and 13-HPL pathway none Avena sativa AVESA.00001b.r3.4Cg0001315 R-ASA-9826637 AVESA.00001b.r3.4Cg0001315 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.4Cg0001328 R-ASA-5654911-2 AVESA.00001b.r3.4Cg0001328 [Golgi lumen] R-ASA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654909 Xylan biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0001341 R-ASA-5608140 AVESA.00001b.r3.4Cg0001341 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.4Cg0001356 R-ASA-1122295-2 AVESA.00001b.r3.4Cg0001356 [cytosol] R-ASA-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119353 Linear furanocoumarin biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0001374 R-ASA-1129964-2 AVESA.00001b.r3.4Cg0001374 [cytosol] R-ASA-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119378 Myo-inositol biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0001374 R-ASA-1129964-2 AVESA.00001b.r3.4Cg0001374 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.4Cg0001378 R-ASA-9658681 AVESA.00001b.r3.4Cg0001378 [plasma membrane] R-ASA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119567 Beta-alanine biosynthesis I none Avena sativa AVESA.00001b.r3.4Cg0001385 R-ASA-5606521-2 AVESA.00001b.r3.4Cg0001385 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.4Cg0001397 R-ASA-8987448-3 AVESA.00001b.r3.4Cg0001397 [peroxisomal matrix] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.4Cg0001450 R-ASA-1125277 AVESA.00001b.r3.4Cg0001450 [cytosol] R-ASA-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119278 PRPP biosynthesis I none Avena sativa AVESA.00001b.r3.4Cg0001474 R-ASA-5149694-2 AVESA.00001b.r3.4Cg0001474 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.4Cg0001502 R-ASA-1127170 AVESA.00001b.r3.4Cg0001502 [cytosol] R-ASA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119276 Choline biosynthesis III none Avena sativa AVESA.00001b.r3.4Cg0001572 R-ASA-6787012-3 AVESA.00001b.r3.4Cg0001572 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Cg0001594 R-ASA-5632120-3 AVESA.00001b.r3.4Cg0001594 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.4Cg0001637 R-ASA-1127523-3 AVESA.00001b.r3.4Cg0001637 [cytosol] R-ASA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Avena sativa AVESA.00001b.r3.4Cg0001672 R-ASA-1128914-4 AVESA.00001b.r3.4Cg0001672 [cytosol] R-ASA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119281 Aspartate biosynthesis I none Avena sativa AVESA.00001b.r3.4Cg0001675 R-ASA-1128914-2 AVESA.00001b.r3.4Cg0001675 [cytosol] R-ASA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119281 Aspartate biosynthesis I none Avena sativa AVESA.00001b.r3.4Cg0001696 R-ASA-1123059-2 AVESA.00001b.r3.4Cg0001696 [cytosol] R-ASA-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119317 Spermine biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0001696 R-ASA-1123059-2 AVESA.00001b.r3.4Cg0001696 [cytosol] R-ASA-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119343 Spermidine biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0001737 R-ASA-5654827-5 AVESA.00001b.r3.4Cg0001737 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.4Cg0001754 R-ASA-1127382-4 AVESA.00001b.r3.4Cg0001754 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.4Cg0001754 R-ASA-1127382-4 AVESA.00001b.r3.4Cg0001754 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0001765 R-ASA-5608120-2 AVESA.00001b.r3.4Cg0001765 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.4Cg0001802 R-ASA-1122403 AVESA.00001b.r3.4Cg0001802 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0001805 R-ASA-9918159-2 AVESA.00001b.r3.4Cg0001805 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0001865 R-ASA-8934208 AVESA.00001b.r3.4Cg0001865 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.4Cg0001963 R-ASA-1122785-3 AVESA.00001b.r3.4Cg0001963 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.4Cg0001963 R-ASA-1122785-3 AVESA.00001b.r3.4Cg0001963 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.4Cg0001963 R-ASA-1122785-3 AVESA.00001b.r3.4Cg0001963 [cytosol] R-ASA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119570 Cytosolic glycolysis none Avena sativa AVESA.00001b.r3.4Cg0001968 R-ASA-1129811-2 AVESA.00001b.r3.4Cg0001968 [mitochondrion] R-ASA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119403 Removal of superoxide radicals none Avena sativa AVESA.00001b.r3.4Cg0001991 R-ASA-1127743-2 AVESA.00001b.r3.4Cg0001991 [cytosol] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0001991 R-ASA-9681930-2 AVESA.00001b.r3.4Cg0001991 [Golgi membrane] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.4Cg0001991 R-ASA-1127743-2 AVESA.00001b.r3.4Cg0001991 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.4Cg0002003 R-ASA-1122605-2 AVESA.00001b.r3.4Cg0002003 [cytosol] R-ASA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119341 Galactosylcyclitol biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0002011 R-ASA-1129867-2 AVESA.00001b.r3.4Cg0002011 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0002107 R-ASA-1127799 AVESA.00001b.r3.4Cg0002107 [cytosol] R-ASA-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119342 Gamma-glutamyl cycle none Avena sativa AVESA.00001b.r3.4Cg0002107 R-ASA-1127799 AVESA.00001b.r3.4Cg0002107 [cytosol] R-ASA-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119483 Glutathione biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0002209 R-ASA-9682481-2 AVESA.00001b.r3.4Cg0002209 [cytosol] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0002209 R-ASA-9682481-2 AVESA.00001b.r3.4Cg0002209 [cytosol] R-ASA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119628 GDP-mannose metabolism none Avena sativa AVESA.00001b.r3.4Cg0002294 R-ASA-9675803-5 AVESA.00001b.r3.4Cg0002294 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.4Cg0002347 R-ASA-5608102-2 AVESA.00001b.r3.4Cg0002347 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.4Cg0002361 R-ASA-8933824-3 AVESA.00001b.r3.4Cg0002361 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.4Cg0002416 R-ASA-1126354 AVESA.00001b.r3.4Cg0002416 [cytosol] R-ASA-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119531 Flavonoid biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0002472 R-ASA-9640753-3 AVESA.00001b.r3.4Cg0002472 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.4Cg0002472 R-ASA-9640753-3 AVESA.00001b.r3.4Cg0002472 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.4Cg0002472 R-ASA-9640753-3 AVESA.00001b.r3.4Cg0002472 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.4Cg0002481 R-ASA-9681910-3 AVESA.00001b.r3.4Cg0002481 [Golgi membrane] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.4Cg0002483 R-ASA-9640734-2 AVESA.00001b.r3.4Cg0002483 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.4Cg0002483 R-ASA-9640881-2 phospho-AVESA.00001b.r3.4Cg0002483 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.4Cg0002695 R-ASA-6787262-4 AVESA.00001b.r3.4Cg0002695 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Cg0002698 R-ASA-1127804 AVESA.00001b.r3.4Cg0002698 [cytosol] R-ASA-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119513 Pinobanksin biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0002735 R-ASA-1129934-3 AVESA.00001b.r3.4Cg0002735 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0002739 R-ASA-9766892-2 SAPK1 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.4Cg0002805 R-ASA-1124695-2 AVESA.00001b.r3.4Cg0002805 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.4Cg0002805 R-ASA-1124695-2 AVESA.00001b.r3.4Cg0002805 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0002867 R-ASA-5225766 AVESA.00001b.r3.4Cg0002867 [nucleoplasm] R-ASA-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5225756 Ethylene mediated signaling none Avena sativa AVESA.00001b.r3.4Cg0002927 R-ASA-1128534-2 AVESA.00001b.r3.4Cg0002927 [cytosol] R-ASA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119437 Glutathione redox reactions I none Avena sativa AVESA.00001b.r3.4Cg0002946 R-ASA-6787262-3 AVESA.00001b.r3.4Cg0002946 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Cg0003010 R-ASA-1126830 AVESA.00001b.r3.4Cg0003010 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.4Cg0003014 R-ASA-1126115 AVESA.00001b.r3.4Cg0003014 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.4Cg0003014 R-ASA-1126115 AVESA.00001b.r3.4Cg0003014 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0003094 R-ASA-9930276 AVESA.00001b.r3.4Cg0003094 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.4Cg0003104 R-ASA-6787084-3 AVESA.00001b.r3.4Cg0003104 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Cg0003114 R-ASA-9826700 AVESA.00001b.r3.4Cg0003114 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.4Cg0003133 R-ASA-6788172-2 AVESA.00001b.r3.4Cg0003133 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.4Cg0003139 R-ASA-9031290-2 AVESA.00001b.r3.4Cg0003139 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.4Cg0003140 R-ASA-9031290-4 AVESA.00001b.r3.4Cg0003140 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.4Cg0003166 R-ASA-8933856 AVESA.00001b.r3.4Cg0003166 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.4Cg0003166 R-ASA-8933748 AVESA.00001b.r3.4Cg0003166 [cytosol] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.4Cg0003166 R-ASA-8933856 AVESA.00001b.r3.4Cg0003166 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.4Cg0003166 R-ASA-8933856 AVESA.00001b.r3.4Cg0003166 [nucleoplasm] R-ASA-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924494 Gravity sensing and statolith sedimentation none Avena sativa AVESA.00001b.r3.4Cg0003166 R-ASA-8933856 AVESA.00001b.r3.4Cg0003166 [nucleoplasm] R-ASA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928995 Drought escape (DE) via ABA-dependent pathway none Avena sativa AVESA.00001b.r3.4Cg0003179 R-ASA-9025712-8 AVESA.00001b.r3.4Cg0003179 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0003185 R-ASA-5655071 AVESA.00001b.r3.4Cg0003185 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0003216 R-ASA-1122726-3 AVESA.00001b.r3.4Cg0003216 [cytosol] R-ASA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119265 Tetrahydrofolate biosynthesis I none Avena sativa AVESA.00001b.r3.4Cg0003216 R-ASA-1122726-3 AVESA.00001b.r3.4Cg0003216 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.4Cg0003227 R-ASA-9639810-2 AVESA.00001b.r3.4Cg0003227 [cell wall] R-ASA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639861 Development of root hair none Avena sativa AVESA.00001b.r3.4Cg0003228 R-ASA-5606478-3 AVESA.00001b.r3.4Cg0003228 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.4Cg0003266 R-ASA-9025294 AVESA.00001b.r3.4Cg0003266 [cytosol] R-ASA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119267 Phenylalanine degradation III none Avena sativa AVESA.00001b.r3.4Cg0003266 R-ASA-1123342 AVESA.00001b.r3.4Cg0003266 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.4Cg0003266 R-ASA-1123342 AVESA.00001b.r3.4Cg0003266 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.4Cg0003266 R-ASA-1123342 AVESA.00001b.r3.4Cg0003266 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0003284 R-ASA-1129351-2 AVESA.00001b.r3.4Cg0003284 [cytosol] R-ASA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119300 Glycolipid desaturation none Avena sativa AVESA.00001b.r3.4Cg0003305 R-ASA-1126138-3 AVESA.00001b.r3.4Cg0003305 [cytosol] R-ASA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119389 Phenylalanine biosynthesis I none Avena sativa AVESA.00001b.r3.4Cg0003306 R-ASA-9675423-3 AVESA.00001b.r3.4Cg0003306 [nucleoplasm] R-ASA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675508 Root elongation none Avena sativa AVESA.00001b.r3.4Cg0003306 R-ASA-9930290-3 MPK5 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.4Cg0003307 R-ASA-1127140-3 AVESA.00001b.r3.4Cg0003307 [cytosol] R-ASA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119403 Removal of superoxide radicals none Avena sativa AVESA.00001b.r3.4Cg0003317 R-ASA-8933708-3 AVESA.00001b.r3.4Cg0003317 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.4Cg0003320 R-ASA-1130032 AVESA.00001b.r3.4Cg0003320 [mitochondrial inner membrane] R-ASA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119260 Cardiolipin biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0003347 R-ASA-5654756-2 AVESA.00001b.r3.4Cg0003347 [cytosol] R-ASA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119281 Aspartate biosynthesis I none Avena sativa AVESA.00001b.r3.4Cg0003347 R-ASA-1123648-2 AVESA.00001b.r3.4Cg0003347 [plastid] R-ASA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119506 tyrosine degradation I none Avena sativa AVESA.00001b.r3.4Cg0003347 R-ASA-5631992-2 AVESA.00001b.r3.4Cg0003347 [plastid stroma] R-ASA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119553 Asparagine biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0003360 R-ASA-9658613 AVESA.00001b.r3.4Cg0003360 [plastid stroma] R-ASA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119263 Arginine biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0003360 R-ASA-9658613 AVESA.00001b.r3.4Cg0003360 [plastid stroma] R-ASA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119622 Arginine biosynthesis II (acetyl cycle) none Avena sativa AVESA.00001b.r3.4Cg0003375 R-ASA-1126799-3 AVESA.00001b.r3.4Cg0003375 [cytosol] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0003375 R-ASA-1126799-3 AVESA.00001b.r3.4Cg0003375 [cytosol] R-ASA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119563 UDP-D-xylose biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0003375 R-ASA-1126799-3 AVESA.00001b.r3.4Cg0003375 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.4Cg0003422 R-ASA-4415078 AVESA.00001b.r3.4Cg0003422 [cytosol] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.4Cg0003436 R-ASA-1127082-2 AVESA.00001b.r3.4Cg0003436 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.4Cg0003451 R-ASA-6787198-2 AVESA.00001b.r3.4Cg0003451 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Cg0003460 R-ASA-1123998 AVESA.00001b.r3.4Cg0003460 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0003462 R-ASA-9025430-2 AVESA.00001b.r3.4Cg0003462 [endoplasmic reticulum membrane] R-ASA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119325 Sphingolipid metabolism none Avena sativa AVESA.00001b.r3.4Cg0003470 R-ASA-9626449-2 AVESA.00001b.r3.4Cg0003470 [cytosol] R-ASA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9626305 Regulatory network of nutrient accumulation none Avena sativa AVESA.00001b.r3.4Cg0003489 R-ASA-1125584-5 AVESA.00001b.r3.4Cg0003489 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.4Cg0003506 R-ASA-1130456 AVESA.00001b.r3.4Cg0003506 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0003507 R-ASA-5632157 AVESA.00001b.r3.4Cg0003507 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.4Cg0003507 R-ASA-5632157 AVESA.00001b.r3.4Cg0003507 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.4Cg0003526 R-ASA-1126421-3 AVESA.00001b.r3.4Cg0003526 [cytosol] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0003526 R-ASA-1126421-3 AVESA.00001b.r3.4Cg0003526 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.4Cg0003542 R-ASA-1125870-2 AVESA.00001b.r3.4Cg0003542 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.4Cg0003542 R-ASA-1125870-2 AVESA.00001b.r3.4Cg0003542 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.4Cg0003542 R-ASA-5606480-2 AVESA.00001b.r3.4Cg0003542 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.4Cg0003567 R-ASA-1125834-4 AVESA.00001b.r3.4Cg0003567 [cytosol] R-ASA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119379 Flavin biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0003586 R-ASA-9025809-2 AVESA.00001b.r3.4Cg0003586 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.4Cg0003622 R-ASA-9639049 AVESA.00001b.r3.4Cg0003622 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.4Cg0003626 R-ASA-1122974-3 AVESA.00001b.r3.4Cg0003626 [mitochondrial matrix] R-ASA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119479 Valine degradation none Avena sativa AVESA.00001b.r3.4Cg0003645 R-ASA-1128804-3 AVESA.00001b.r3.4Cg0003645 [cytosol] R-ASA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119516 Trehalose biosynthesis I none Avena sativa AVESA.00001b.r3.4Cg0003652 R-ASA-1127192 AVESA.00001b.r3.4Cg0003652 [cytosol] R-ASA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119291 Nitrate assimilation none Avena sativa AVESA.00001b.r3.4Cg0003652 R-ASA-1127192 AVESA.00001b.r3.4Cg0003652 [cytosol] R-ASA-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119293 Glutamine biosynthesis I none Avena sativa AVESA.00001b.r3.4Cg0003652 R-ASA-1127192 AVESA.00001b.r3.4Cg0003652 [cytosol] R-ASA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119443 Ammonia assimilation cycle none Avena sativa AVESA.00001b.r3.4Cg0003667 R-ASA-1129111-2 AVESA.00001b.r3.4Cg0003667 [cytosol] R-ASA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119349 S-methylmethionine cycle none Avena sativa AVESA.00001b.r3.4Cg0003667 R-ASA-1129111-2 AVESA.00001b.r3.4Cg0003667 [cytosol] R-ASA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119400 Methionine biosynthesis II none Avena sativa AVESA.00001b.r3.4Cg0003694 R-ASA-9645944-3 AVESA.00001b.r3.4Cg0003694 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.4Cg0003747 R-ASA-9640716-2 AVESA.00001b.r3.4Cg0003747 [nucleoplasm] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.4Cg0003747 R-ASA-9640716-2 AVESA.00001b.r3.4Cg0003747 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.4Cg0003747 R-ASA-9640716-2 AVESA.00001b.r3.4Cg0003747 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.4Cg0003760 R-ASA-5654859 AVESA.00001b.r3.4Cg0003760 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.4Cg0003760 R-ASA-5654859 AVESA.00001b.r3.4Cg0003760 [nucleoplasm] R-ASA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Avena sativa AVESA.00001b.r3.4Cg0003783 R-ASA-9826620-4 HOX12/ OsGT1 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.4Cg0003783 R-ASA-9826620-4 HOX12/ OsGT1 [nucleoplasm] R-ASA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Avena sativa AVESA.00001b.r3.4Dg0000022 R-ASA-6788085-2 AVESA.00001b.r3.4Dg0000022 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.4Dg0000026 R-ASA-5654797-3 AVESA.00001b.r3.4Dg0000026 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.4Dg0000027 R-ASA-1125804 AVESA.00001b.r3.4Dg0000027 [cytosol] R-ASA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119300 Glycolipid desaturation none Avena sativa AVESA.00001b.r3.4Dg0000037 R-ASA-1126354-2 AVESA.00001b.r3.4Dg0000037 [cytosol] R-ASA-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119531 Flavonoid biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0000065 R-ASA-1127539 AVESA.00001b.r3.4Dg0000065 [cytosol] R-ASA-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Avena sativa AVESA.00001b.r3.4Dg0000065 R-ASA-1127539 AVESA.00001b.r3.4Dg0000065 [cytosol] R-ASA-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119439 Cholesterol biosynthesis III (via desmosterol) none Avena sativa AVESA.00001b.r3.4Dg0000065 R-ASA-1127539 AVESA.00001b.r3.4Dg0000065 [cytosol] R-ASA-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119559 Cholesterol biosynthesis I none Avena sativa AVESA.00001b.r3.4Dg0000134 R-ASA-8987531-5 AVESA.00001b.r3.4Dg0000134 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.4Dg0000134 R-ASA-1125951-5 AVESA.00001b.r3.4Dg0000134 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.4Dg0000135 R-ASA-8987531-18 AVESA.00001b.r3.4Dg0000135 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.4Dg0000135 R-ASA-1125951-18 AVESA.00001b.r3.4Dg0000135 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.4Dg0000136 R-ASA-8987531-10 AVESA.00001b.r3.4Dg0000136 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.4Dg0000136 R-ASA-1125951-10 AVESA.00001b.r3.4Dg0000136 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.4Dg0000269 R-ASA-1127799-2 AVESA.00001b.r3.4Dg0000269 [cytosol] R-ASA-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119342 Gamma-glutamyl cycle none Avena sativa AVESA.00001b.r3.4Dg0000269 R-ASA-1127799-2 AVESA.00001b.r3.4Dg0000269 [cytosol] R-ASA-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119483 Glutathione biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0000332 R-ASA-5632134 AVESA.00001b.r3.4Dg0000332 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.4Dg0000337 R-ASA-1129082-2 AVESA.00001b.r3.4Dg0000337 [mitochondrial matrix] R-ASA-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119445 Beta-alanine biosynthesis II none Avena sativa AVESA.00001b.r3.4Dg0000354 R-ASA-9682481 AVESA.00001b.r3.4Dg0000354 [cytosol] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0000354 R-ASA-9682481 AVESA.00001b.r3.4Dg0000354 [cytosol] R-ASA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119628 GDP-mannose metabolism none Avena sativa AVESA.00001b.r3.4Dg0000383 R-ASA-5679502 AVESA.00001b.r3.4Dg0000383 [plastid stroma] R-ASA-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5367729 Strigolactone biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0000401 R-ASA-1127526-2 AVESA.00001b.r3.4Dg0000401 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0000407 R-ASA-5608102-3 AVESA.00001b.r3.4Dg0000407 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.4Dg0000430 R-ASA-9675803-2 AVESA.00001b.r3.4Dg0000430 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.4Dg0000447 R-ASA-9640753-2 AVESA.00001b.r3.4Dg0000447 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.4Dg0000447 R-ASA-9640753-2 AVESA.00001b.r3.4Dg0000447 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.4Dg0000447 R-ASA-9640753-2 AVESA.00001b.r3.4Dg0000447 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.4Dg0000461 R-ASA-9658611-2 AVESA.00001b.r3.4Dg0000461 [plastid stroma] R-ASA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119263 Arginine biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0000461 R-ASA-9658611-2 AVESA.00001b.r3.4Dg0000461 [plastid stroma] R-ASA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119539 Ornithine biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0000461 R-ASA-9658611-2 AVESA.00001b.r3.4Dg0000461 [plastid stroma] R-ASA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119622 Arginine biosynthesis II (acetyl cycle) none Avena sativa AVESA.00001b.r3.4Dg0000498 R-ASA-9681910-2 AVESA.00001b.r3.4Dg0000498 [Golgi membrane] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.4Dg0000505 R-ASA-5632114 AVESA.00001b.r3.4Dg0000505 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.4Dg0000590 R-ASA-9640734 AVESA.00001b.r3.4Dg0000590 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.4Dg0000590 R-ASA-9640881 phospho-AVESA.00001b.r3.4Dg0000590 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.4Dg0000605 R-ASA-6787262 AVESA.00001b.r3.4Dg0000605 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Dg0000644 R-ASA-8933824 AVESA.00001b.r3.4Dg0000644 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.4Dg0000680 R-ASA-5632111 AVESA.00001b.r3.4Dg0000680 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.4Dg0000680 R-ASA-5632216 phospho-AVESA.00001b.r3.4Dg0000680 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.4Dg0000701 R-ASA-9826669-2 OsYABBY6 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.4Dg0000710 R-ASA-1125151 AVESA.00001b.r3.4Dg0000710 [cytosol] R-ASA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119400 Methionine biosynthesis II none Avena sativa AVESA.00001b.r3.4Dg0000710 R-ASA-1125151 AVESA.00001b.r3.4Dg0000710 [cytosol] R-ASA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119501 S-adenosyl-L-methionine cycle none Avena sativa AVESA.00001b.r3.4Dg0000734 R-ASA-1122632 AVESA.00001b.r3.4Dg0000734 [cytosol] R-ASA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119331 Cysteine biosynthesis I none Avena sativa AVESA.00001b.r3.4Dg0000761 R-ASA-9626337 AVESA.00001b.r3.4Dg0000761 [Golgi-associated vesicle] R-ASA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9626305 Regulatory network of nutrient accumulation none Avena sativa AVESA.00001b.r3.4Dg0000792 R-ASA-1124969-5 AVESA.00001b.r3.4Dg0000792 [cytosol] R-ASA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119265 Tetrahydrofolate biosynthesis I none Avena sativa AVESA.00001b.r3.4Dg0000792 R-ASA-1124969-5 AVESA.00001b.r3.4Dg0000792 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.4Dg0000797 R-ASA-1124490-2 AVESA.00001b.r3.4Dg0000797 [cytosol] R-ASA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119534 Pyridoxal 5'-phosphate salvage pathway none Avena sativa AVESA.00001b.r3.4Dg0000797 R-ASA-1124490-2 AVESA.00001b.r3.4Dg0000797 [cytosol] R-ASA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119594 Pyridoxal 5'-phosphate biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0000858 R-ASA-9609343-3 AVESA.00001b.r3.4Dg0000858 [cytosol] R-ASA-9609352 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609352 Lycopene catabolism none Avena sativa AVESA.00001b.r3.4Dg0000890 R-ASA-1125839-2 AVESA.00001b.r3.4Dg0000890 [cytosol] R-ASA-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119386 UDP-N-acetylgalactosamine biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0000899 R-ASA-9025698-3 AVESA.00001b.r3.4Dg0000899 [plasma membrane] R-ASA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025727 Iron uptake and transport in root vascular system none Avena sativa AVESA.00001b.r3.4Dg0000905 R-ASA-1126593-2 AVESA.00001b.r3.4Dg0000905 [endosome] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.4Dg0000905 R-ASA-5679293-2 AVESA.00001b.r3.4Dg0000905 [plasma membrane] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.4Dg0000905 R-ASA-8858098-2 AVESA.00001b.r3.4Dg0000905 [plasma membrane] R-ASA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8858053 Polar auxin transport none Avena sativa AVESA.00001b.r3.4Dg0000918 R-ASA-9645907-2 AVESA.00001b.r3.4Dg0000918 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.4Dg0000918 R-ASA-9645907-2 AVESA.00001b.r3.4Dg0000918 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.4Dg0000990 R-ASA-9681886-2 AVESA.00001b.r3.4Dg0000990 [cytosol] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.4Dg0001075 R-ASA-9675807-2 AVESA.00001b.r3.4Dg0001075 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.4Dg0001075 R-ASA-9675807-2 AVESA.00001b.r3.4Dg0001075 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.4Dg0001075 R-ASA-9675807-2 AVESA.00001b.r3.4Dg0001075 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.4Dg0001100 R-ASA-6788234-2 AVESA.00001b.r3.4Dg0001100 [cytosol] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.4Dg0001100 R-ASA-1124041-2 AVESA.00001b.r3.4Dg0001100 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.4Dg0001140 R-ASA-1122242-2 AVESA.00001b.r3.4Dg0001140 [cytosol] R-ASA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119267 Phenylalanine degradation III none Avena sativa AVESA.00001b.r3.4Dg0001144 R-ASA-1122242 AVESA.00001b.r3.4Dg0001144 [cytosol] R-ASA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119267 Phenylalanine degradation III none Avena sativa AVESA.00001b.r3.4Dg0001145 R-ASA-1122242-4 AVESA.00001b.r3.4Dg0001145 [cytosol] R-ASA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119267 Phenylalanine degradation III none Avena sativa AVESA.00001b.r3.4Dg0001158 R-ASA-5084918 AVESA.00001b.r3.4Dg0001158 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.4Dg0001219 R-ASA-1125182-2 AVESA.00001b.r3.4Dg0001219 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0001225 R-ASA-1127455-2 AVESA.00001b.r3.4Dg0001225 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.4Dg0001225 R-ASA-1127455-2 AVESA.00001b.r3.4Dg0001225 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0001299 R-ASA-1129390-2 AVESA.00001b.r3.4Dg0001299 [mitochondrion] R-ASA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119506 tyrosine degradation I none Avena sativa AVESA.00001b.r3.4Dg0001312 R-ASA-4415055-3 AVESA.00001b.r3.4Dg0001312 [cytosol] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.4Dg0001312 R-ASA-4415073-3 phospho-AVESA.00001b.r3.4Dg0001312 [cytosol] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.4Dg0001312 R-ASA-4415055-3 AVESA.00001b.r3.4Dg0001312 [cytosol] R-ASA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639861 Development of root hair none Avena sativa AVESA.00001b.r3.4Dg0001319 R-ASA-1126436-6 AVESA.00001b.r3.4Dg0001319 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.4Dg0001322 R-ASA-5138500-2 AVESA.00001b.r3.4Dg0001322 [plastid stroma] R-ASA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119263 Arginine biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0001322 R-ASA-1129397-2 AVESA.00001b.r3.4Dg0001322 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.4Dg0001322 R-ASA-1129397-2 AVESA.00001b.r3.4Dg0001322 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.4Dg0001322 R-ASA-1129397-2 AVESA.00001b.r3.4Dg0001322 [cytosol] R-ASA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119295 Homoserine biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0001322 R-ASA-5138500-2 AVESA.00001b.r3.4Dg0001322 [plastid stroma] R-ASA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119539 Ornithine biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0001322 R-ASA-5138500-2 AVESA.00001b.r3.4Dg0001322 [plastid stroma] R-ASA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119622 Arginine biosynthesis II (acetyl cycle) none Avena sativa AVESA.00001b.r3.4Dg0001392 R-ASA-5631953-2 AVESA.00001b.r3.4Dg0001392 [mitochondrial matrix] R-ASA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119289 Arginine degradation none Avena sativa AVESA.00001b.r3.4Dg0001392 R-ASA-1124214-2 AVESA.00001b.r3.4Dg0001392 [cytosol] R-ASA-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119318 Proline biosynthesis V (from arginine) none Avena sativa AVESA.00001b.r3.4Dg0001392 R-ASA-1124214-2 AVESA.00001b.r3.4Dg0001392 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.4Dg0001396 R-ASA-5221144-2 AVESA.00001b.r3.4Dg0001396 [plastid] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0001474 R-ASA-6788149 AVESA.00001b.r3.4Dg0001474 [cytosol] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.4Dg0001475 R-ASA-9025728 AVESA.00001b.r3.4Dg0001475 [plasma membrane] R-ASA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025727 Iron uptake and transport in root vascular system none Avena sativa AVESA.00001b.r3.4Dg0001524 R-ASA-6787127-2 AVESA.00001b.r3.4Dg0001524 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Dg0001524 R-ASA-6787052-2 AVESA.00001b.r3.4Dg0001524 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Dg0001596 R-ASA-1124285-4 AVESA.00001b.r3.4Dg0001596 [cytosol] R-ASA-1119284 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119284 Coumarin biosynthesis (via 2-coumarate) none Avena sativa AVESA.00001b.r3.4Dg0001598 R-ASA-1124285-3 AVESA.00001b.r3.4Dg0001598 [cytosol] R-ASA-1119284 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119284 Coumarin biosynthesis (via 2-coumarate) none Avena sativa AVESA.00001b.r3.4Dg0001599 R-ASA-1124285-6 AVESA.00001b.r3.4Dg0001599 [cytosol] R-ASA-1119284 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119284 Coumarin biosynthesis (via 2-coumarate) none Avena sativa AVESA.00001b.r3.4Dg0001615 R-ASA-5679455 AVESA.00001b.r3.4Dg0001615 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.4Dg0001615 R-ASA-6787020 AVESA.00001b.r3.4Dg0001615 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Dg0001631 R-ASA-5632316 AVESA.00001b.r3.4Dg0001631 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.4Dg0001644 R-ASA-1128632 AVESA.00001b.r3.4Dg0001644 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0001644 R-ASA-1128632 AVESA.00001b.r3.4Dg0001644 [cytosol] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0001649 R-ASA-1126971-2 AVESA.00001b.r3.4Dg0001649 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0001649 R-ASA-1126971-2 AVESA.00001b.r3.4Dg0001649 [cytosol] R-ASA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119618 13-LOX and 13-HPL pathway none Avena sativa AVESA.00001b.r3.4Dg0001651 R-ASA-1127031 AVESA.00001b.r3.4Dg0001651 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.4Dg0001664 R-ASA-1125460-3 AVESA.00001b.r3.4Dg0001664 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.4Dg0001664 R-ASA-1125460-3 AVESA.00001b.r3.4Dg0001664 [cytosol] R-ASA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119563 UDP-D-xylose biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0001664 R-ASA-1125460-3 AVESA.00001b.r3.4Dg0001664 [cytosol] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.4Dg0001680 R-ASA-8933842-3 AVESA.00001b.r3.4Dg0001680 [cytosol] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.4Dg0001680 R-ASA-8933843-3 AVESA.00001b.r3.4Dg0001680 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.4Dg0001704 R-ASA-9927759 AVESA.00001b.r3.4Dg0001704 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.4Dg0001707 R-ASA-9639012-2 AVESA.00001b.r3.4Dg0001707 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.4Dg0001714 R-ASA-1123895 AVESA.00001b.r3.4Dg0001714 [cytosol] R-ASA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119334 Ethylene biosynthesis from methionine none Avena sativa AVESA.00001b.r3.4Dg0001714 R-ASA-1123895 AVESA.00001b.r3.4Dg0001714 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.4Dg0001724 R-ASA-9035593-3 AVESA.00001b.r3.4Dg0001724 [cytosol] R-ASA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9035605 Regulation of seed size none Avena sativa AVESA.00001b.r3.4Dg0001724 R-ASA-9035634-3 AVESA.00001b.r3.4Dg0001724 [nucleoplasm] R-ASA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9035605 Regulation of seed size none Avena sativa AVESA.00001b.r3.4Dg0001724 R-ASA-9035593-3 AVESA.00001b.r3.4Dg0001724 [cytosol] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.4Dg0001724 R-ASA-9035634-3 AVESA.00001b.r3.4Dg0001724 [nucleoplasm] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.4Dg0001741 R-ASA-1128745-3 AVESA.00001b.r3.4Dg0001741 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.4Dg0001748 R-ASA-9035785-3 AVESA.00001b.r3.4Dg0001748 [nucleoplasm] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.4Dg0001754 R-ASA-6786984-2 AVESA.00001b.r3.4Dg0001754 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Dg0001754 R-ASA-6787051-2 AVESA.00001b.r3.4Dg0001754 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Dg0001755 R-ASA-1122398 AVESA.00001b.r3.4Dg0001755 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0001777 R-ASA-1125341-3 AVESA.00001b.r3.4Dg0001777 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.4Dg0001777 R-ASA-1125341-3 AVESA.00001b.r3.4Dg0001777 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0001780 R-ASA-9640783 AVESA.00001b.r3.4Dg0001780 [nucleoplasm] R-ASA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640760 G1 phase none Avena sativa AVESA.00001b.r3.4Dg0001789 R-ASA-8987575-2 AVESA.00001b.r3.4Dg0001789 [mitochondrial matrix] R-ASA-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119311 Glycine biosynthesis I none Avena sativa AVESA.00001b.r3.4Dg0001821 R-ASA-1128092 AVESA.00001b.r3.4Dg0001821 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.4Dg0001821 R-ASA-1128092 AVESA.00001b.r3.4Dg0001821 [nucleoplasm] R-ASA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030557 Lateral root initiation none Avena sativa AVESA.00001b.r3.4Dg0001821 R-ASA-1128092 AVESA.00001b.r3.4Dg0001821 [nucleoplasm] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.4Dg0001826 R-ASA-1128257 AVESA.00001b.r3.4Dg0001826 [plastid stroma] R-ASA-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119529 Sulfate activation for sulfonation none Avena sativa AVESA.00001b.r3.4Dg0001870 R-ASA-1126604 AVESA.00001b.r3.4Dg0001870 [cytosol] R-ASA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119438 Secologanin and strictosidine biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0001885 R-ASA-8934009-2 AVESA.00001b.r3.4Dg0001885 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.4Dg0001885 R-ASA-8934009-2 AVESA.00001b.r3.4Dg0001885 [nucleoplasm] R-ASA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934257 Transition from vegetative to reproductive shoot apical meristem none Avena sativa AVESA.00001b.r3.4Dg0001885 R-ASA-8934009-2 AVESA.00001b.r3.4Dg0001885 [nucleoplasm] R-ASA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609102 Flower development none Avena sativa AVESA.00001b.r3.4Dg0001891 R-ASA-9639171-3 AVESA.00001b.r3.4Dg0001891 [plant-type vacuole membrane] R-ASA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639136 Response to Aluminum stress none Avena sativa AVESA.00001b.r3.4Dg0001905 R-ASA-1125460 AVESA.00001b.r3.4Dg0001905 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.4Dg0001905 R-ASA-1125460 AVESA.00001b.r3.4Dg0001905 [cytosol] R-ASA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119563 UDP-D-xylose biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0001905 R-ASA-1125460 AVESA.00001b.r3.4Dg0001905 [cytosol] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.4Dg0001924 R-ASA-1125504 AVESA.00001b.r3.4Dg0001924 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.4Dg0001924 R-ASA-1125504 AVESA.00001b.r3.4Dg0001924 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.4Dg0001924 R-ASA-1125504 AVESA.00001b.r3.4Dg0001924 [cytosol] R-ASA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119295 Homoserine biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0001924 R-ASA-5606489 AVESA.00001b.r3.4Dg0001924 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.4Dg0001945 R-ASA-8933816 AVESA.00001b.r3.4Dg0001945 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.4Dg0002037 R-ASA-1123404-3 AVESA.00001b.r3.4Dg0002037 [peroxisomal matrix] R-ASA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119407 Ureide biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0002043 R-ASA-1124484-3 AVESA.00001b.r3.4Dg0002043 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.4Dg0002054 R-ASA-5632110-3 AVESA.00001b.r3.4Dg0002054 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.4Dg0002054 R-ASA-5632110-3 AVESA.00001b.r3.4Dg0002054 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.4Dg0002079 R-ASA-1124984-3 AVESA.00001b.r3.4Dg0002079 [cytosol] R-ASA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119596 Glutamate biosynthesis I none Avena sativa AVESA.00001b.r3.4Dg0002099 R-ASA-1250418-4 AVESA.00001b.r3.4Dg0002099 [cytosol] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0002099 R-ASA-1129305-4 AVESA.00001b.r3.4Dg0002099 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.4Dg0002103 R-ASA-9675838 AVESA.00001b.r3.4Dg0002103 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.4Dg0002125 R-ASA-1124935-2 AVESA.00001b.r3.4Dg0002125 [cytosol] R-ASA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119349 S-methylmethionine cycle none Avena sativa AVESA.00001b.r3.4Dg0002131 R-ASA-2685738-2 AVESA.00001b.r3.4Dg0002131 [cytosol] R-ASA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119580 IAA biosynthesis II none Avena sativa AVESA.00001b.r3.4Dg0002139 R-ASA-1129781-3 AVESA.00001b.r3.4Dg0002139 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0002186 R-ASA-1128553-3 AVESA.00001b.r3.4Dg0002186 [cytosol] R-ASA-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Avena sativa AVESA.00001b.r3.4Dg0002186 R-ASA-1128553-3 AVESA.00001b.r3.4Dg0002186 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0002186 R-ASA-1128553-3 AVESA.00001b.r3.4Dg0002186 [cytosol] R-ASA-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119439 Cholesterol biosynthesis III (via desmosterol) none Avena sativa AVESA.00001b.r3.4Dg0002186 R-ASA-1128553-3 AVESA.00001b.r3.4Dg0002186 [cytosol] R-ASA-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119559 Cholesterol biosynthesis I none Avena sativa AVESA.00001b.r3.4Dg0002187 R-ASA-6787093 AVESA.00001b.r3.4Dg0002187 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Dg0002189 R-ASA-5632241-2 AVESA.00001b.r3.4Dg0002189 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.4Dg0002208 R-ASA-1130084 AVESA.00001b.r3.4Dg0002208 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.4Dg0002221 R-ASA-1122861-3 AVESA.00001b.r3.4Dg0002221 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0002242 R-ASA-1250417-2 AVESA.00001b.r3.4Dg0002242 [cytosol] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0002287 R-ASA-9608682-2 AVESA.00001b.r3.4Dg0002287 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.4Dg0002287 R-ASA-9608682-2 AVESA.00001b.r3.4Dg0002287 [nucleoplasm] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.4Dg0002287 R-ASA-9608606-2 AVESA.00001b.r3.4Dg0002287 [cytosol] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.4Dg0002293 R-ASA-1124274 AVESA.00001b.r3.4Dg0002293 [cytosol] R-ASA-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119513 Pinobanksin biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0002293 R-ASA-1124274 AVESA.00001b.r3.4Dg0002293 [cytosol] R-ASA-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119531 Flavonoid biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0002332 R-ASA-1123751-2 AVESA.00001b.r3.4Dg0002332 [cytosol] R-ASA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119292 Cytokinins 7-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0002332 R-ASA-1123751-2 AVESA.00001b.r3.4Dg0002332 [cytosol] R-ASA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119375 Cytokinins 9-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0002332 R-ASA-1123751-2 AVESA.00001b.r3.4Dg0002332 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0002336 R-ASA-8986695-2 AVESA.00001b.r3.4Dg0002336 [endoplasmic reticulum membrane] R-ASA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8986768 Anther and pollen development none Avena sativa AVESA.00001b.r3.4Dg0002343 R-ASA-1128656-2 AVESA.00001b.r3.4Dg0002343 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0002353 R-ASA-9639016-2 AVESA.00001b.r3.4Dg0002353 [cytosol] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0002353 R-ASA-9639016-2 AVESA.00001b.r3.4Dg0002353 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.4Dg0002387 R-ASA-1129507 AVESA.00001b.r3.4Dg0002387 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.4Dg0002412 R-ASA-9626474-3 AVESA.00001b.r3.4Dg0002412 [trans-Golgi network membrane] R-ASA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9626305 Regulatory network of nutrient accumulation none Avena sativa AVESA.00001b.r3.4Dg0002417 R-ASA-2685731-2 AVESA.00001b.r3.4Dg0002417 [cytosol] R-ASA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119580 IAA biosynthesis II none Avena sativa AVESA.00001b.r3.4Dg0002481 R-ASA-5632129-3 AVESA.00001b.r3.4Dg0002481 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.4Dg0002493 R-ASA-1126714-3 AVESA.00001b.r3.4Dg0002493 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.4Dg0002493 R-ASA-1126714-3 AVESA.00001b.r3.4Dg0002493 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.4Dg0002493 R-ASA-1126714-3 AVESA.00001b.r3.4Dg0002493 [cytosol] R-ASA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119295 Homoserine biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0002493 R-ASA-5606484-3 AVESA.00001b.r3.4Dg0002493 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.4Dg0002531 R-ASA-1126091 AVESA.00001b.r3.4Dg0002531 [cytosol] R-ASA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119394 Pantothenate and coenzyme A biosynthesis III none Avena sativa AVESA.00001b.r3.4Dg0002531 R-ASA-1126091 AVESA.00001b.r3.4Dg0002531 [cytosol] R-ASA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119496 Pantothenate biosynthesis I none Avena sativa AVESA.00001b.r3.4Dg0002531 R-ASA-1126091 AVESA.00001b.r3.4Dg0002531 [cytosol] R-ASA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119544 Pantothenate biosynthesis II none Avena sativa AVESA.00001b.r3.4Dg0002531 R-ASA-1126091 AVESA.00001b.r3.4Dg0002531 [cytosol] R-ASA-1119568 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119568 Pantothenate biosynthesis III none Avena sativa AVESA.00001b.r3.4Dg0002588 R-ASA-1130202 AVESA.00001b.r3.4Dg0002588 [cytosol] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0002612 R-ASA-5149683-3 AVESA.00001b.r3.4Dg0002612 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.4Dg0002617 R-ASA-6787181-3 AVESA.00001b.r3.4Dg0002617 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.4Dg0002629 R-ASA-9640886 AVESA.00001b.r3.4Dg0002629 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.4Dg0002629 R-ASA-9640886 AVESA.00001b.r3.4Dg0002629 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.4Dg0002645 R-ASA-9930216 ABI5 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.4Dg0002647 R-ASA-6787863-3 AVESA.00001b.r3.4Dg0002647 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.4Dg0002669 R-ASA-1124453-3 AVESA.00001b.r3.4Dg0002669 [peroxisomal matrix] R-ASA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119407 Ureide biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0002685 R-ASA-9645950 AVESA.00001b.r3.4Dg0002685 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.4Dg0002685 R-ASA-9645950 AVESA.00001b.r3.4Dg0002685 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.4Dg0002685 R-ASA-9645950 AVESA.00001b.r3.4Dg0002685 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.4Dg0002685 R-ASA-9645950 AVESA.00001b.r3.4Dg0002685 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.4Dg0002685 R-ASA-9645950 AVESA.00001b.r3.4Dg0002685 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.4Dg0002769 R-ASA-9930308 SNAC2 (OsNAC6) [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.4Dg0002771 R-ASA-9675790-2 AVESA.00001b.r3.4Dg0002771 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.4Dg0002824 R-ASA-9639789-3 AVESA.00001b.r3.4Dg0002824 [plasma membrane] R-ASA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639861 Development of root hair none Avena sativa AVESA.00001b.r3.4Dg0002830 R-ASA-9675297-2 AVESA.00001b.r3.4Dg0002830 [mitochondrion] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.4Dg0002856 R-ASA-1129585 AVESA.00001b.r3.4Dg0002856 [cytosol] R-ASA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119265 Tetrahydrofolate biosynthesis I none Avena sativa AVESA.00001b.r3.4Dg0002856 R-ASA-1129585 AVESA.00001b.r3.4Dg0002856 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.4Dg0002876 R-ASA-5149646 AVESA.00001b.r3.4Dg0002876 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.4Dg0002876 R-ASA-1126652 AVESA.00001b.r3.4Dg0002876 [cytosol] R-ASA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119570 Cytosolic glycolysis none Avena sativa AVESA.00001b.r3.4Dg0002932 R-ASA-9025712-5 AVESA.00001b.r3.4Dg0002932 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0002945 R-ASA-1124348-2 AVESA.00001b.r3.4Dg0002945 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0002968 R-ASA-9675500-3 AVESA.00001b.r3.4Dg0002968 [endoplasmic reticulum membrane] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.4Dg0002970 R-ASA-1128463-4 AVESA.00001b.r3.4Dg0002970 [cytosol] R-ASA-1119550 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119550 Gentiodelphin biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0002971 R-ASA-1128463 AVESA.00001b.r3.4Dg0002971 [cytosol] R-ASA-1119550 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119550 Gentiodelphin biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0003002 R-ASA-1123690-2 AVESA.00001b.r3.4Dg0003002 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.4Dg0003003 R-ASA-1125452-3 AVESA.00001b.r3.4Dg0003003 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.4Dg0003003 R-ASA-1125452-3 AVESA.00001b.r3.4Dg0003003 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.4Dg0003003 R-ASA-1125452-3 AVESA.00001b.r3.4Dg0003003 [cytosol] R-ASA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119295 Homoserine biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0003003 R-ASA-5606511-3 AVESA.00001b.r3.4Dg0003003 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.4Dg0003004 R-ASA-8879006-2 AVESA.00001b.r3.4Dg0003004 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.4Dg0003007 R-ASA-9025492-4 AVESA.00001b.r3.4Dg0003007 [endoplasmic reticulum membrane] R-ASA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119325 Sphingolipid metabolism none Avena sativa AVESA.00001b.r3.4Dg0003007 R-ASA-1126933-4 AVESA.00001b.r3.4Dg0003007 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.4Dg0003051 R-ASA-1173282-2 AVESA.00001b.r3.4Dg0003051 [mitochondrial inner membrane] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.4Dg0003134 R-ASA-5631958-4 AVESA.00001b.r3.4Dg0003134 [cytosol] R-ASA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119289 Arginine degradation none Avena sativa AVESA.00001b.r3.4Dg0003134 R-ASA-1122345-4 AVESA.00001b.r3.4Dg0003134 [cytosol] R-ASA-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119318 Proline biosynthesis V (from arginine) none Avena sativa AVESA.00001b.r3.4Dg0003134 R-ASA-1122345-4 AVESA.00001b.r3.4Dg0003134 [cytosol] R-ASA-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119631 Proline biosynthesis I none Avena sativa AVESA.00001b.r3.4Dg0003206 R-ASA-1127597-4 AVESA.00001b.r3.4Dg0003206 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.4Dg0003225 R-ASA-1126488-2 AVESA.00001b.r3.4Dg0003225 [mitochondrial inner membrane] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.4Dg0003241 R-ASA-1126955-2 AVESA.00001b.r3.4Dg0003241 [plastid] R-ASA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119407 Ureide biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0003261 R-ASA-2685730-9 AVESA.00001b.r3.4Dg0003261 [cytosol] R-ASA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119580 IAA biosynthesis II none Avena sativa AVESA.00001b.r3.4Dg0003262 R-ASA-2685730-10 AVESA.00001b.r3.4Dg0003262 [cytosol] R-ASA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119580 IAA biosynthesis II none Avena sativa AVESA.00001b.r3.4Dg0003299 R-ASA-1126436 AVESA.00001b.r3.4Dg0003299 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.4Dg0003310 R-ASA-1124560-3 AVESA.00001b.r3.4Dg0003310 [cytosol] R-ASA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119563 UDP-D-xylose biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0003310 R-ASA-9681903-3 AVESA.00001b.r3.4Dg0003310 [Golgi lumen] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.4Dg0003310 R-ASA-1124560-3 AVESA.00001b.r3.4Dg0003310 [cytosol] R-ASA-5654894 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654894 UDP-D-apiose biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0003350 R-ASA-9826691-2 AVESA.00001b.r3.4Dg0003350 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.4Dg0003351 R-ASA-9826691-3 AVESA.00001b.r3.4Dg0003351 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.4Dg0003406 R-ASA-9675297 AVESA.00001b.r3.4Dg0003406 [mitochondrion] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.4Dg0003446 R-ASA-5149646-2 AVESA.00001b.r3.4Dg0003446 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.4Dg0003446 R-ASA-1126652-2 AVESA.00001b.r3.4Dg0003446 [cytosol] R-ASA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119570 Cytosolic glycolysis none Avena sativa AVESA.00001b.r3.4Dg0003498 R-ASA-9025712-9 AVESA.00001b.r3.4Dg0003498 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0003516 R-ASA-1124348 AVESA.00001b.r3.4Dg0003516 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0003545 R-ASA-9675500 AVESA.00001b.r3.4Dg0003545 [endoplasmic reticulum membrane] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.4Dg0003548 R-ASA-1128463-3 AVESA.00001b.r3.4Dg0003548 [cytosol] R-ASA-1119550 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119550 Gentiodelphin biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0003585 R-ASA-1123690 AVESA.00001b.r3.4Dg0003585 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.4Dg0003586 R-ASA-1125452-2 AVESA.00001b.r3.4Dg0003586 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.4Dg0003586 R-ASA-1125452-2 AVESA.00001b.r3.4Dg0003586 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.4Dg0003586 R-ASA-1125452-2 AVESA.00001b.r3.4Dg0003586 [cytosol] R-ASA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119295 Homoserine biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0003586 R-ASA-5606511-2 AVESA.00001b.r3.4Dg0003586 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.4Dg0003587 R-ASA-8879006 AVESA.00001b.r3.4Dg0003587 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.4Dg0003591 R-ASA-9025492-3 AVESA.00001b.r3.4Dg0003591 [endoplasmic reticulum membrane] R-ASA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119325 Sphingolipid metabolism none Avena sativa AVESA.00001b.r3.4Dg0003591 R-ASA-1126933-3 AVESA.00001b.r3.4Dg0003591 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.4Dg0003617 R-ASA-1127527-2 AVESA.00001b.r3.4Dg0003617 [cytosol] R-ASA-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Avena sativa AVESA.00001b.r3.4Dg0003639 R-ASA-1173282-3 AVESA.00001b.r3.4Dg0003639 [mitochondrial inner membrane] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.4Dg0003723 R-ASA-5631958-3 AVESA.00001b.r3.4Dg0003723 [cytosol] R-ASA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119289 Arginine degradation none Avena sativa AVESA.00001b.r3.4Dg0003723 R-ASA-1122345-3 AVESA.00001b.r3.4Dg0003723 [cytosol] R-ASA-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119318 Proline biosynthesis V (from arginine) none Avena sativa AVESA.00001b.r3.4Dg0003723 R-ASA-1122345-3 AVESA.00001b.r3.4Dg0003723 [cytosol] R-ASA-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119631 Proline biosynthesis I none Avena sativa AVESA.00001b.r3.4Dg0003773 R-ASA-1127597-2 AVESA.00001b.r3.4Dg0003773 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.4Dg0003796 R-ASA-1126488 AVESA.00001b.r3.4Dg0003796 [mitochondrial inner membrane] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.4Dg0003819 R-ASA-1126955-3 AVESA.00001b.r3.4Dg0003819 [plastid] R-ASA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119407 Ureide biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0003831 R-ASA-2685730-3 AVESA.00001b.r3.4Dg0003831 [cytosol] R-ASA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119580 IAA biosynthesis II none Avena sativa AVESA.00001b.r3.4Dg0003832 R-ASA-2685730-7 AVESA.00001b.r3.4Dg0003832 [cytosol] R-ASA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119580 IAA biosynthesis II none Avena sativa AVESA.00001b.r3.4Dg0003833 R-ASA-2685730-4 AVESA.00001b.r3.4Dg0003833 [cytosol] R-ASA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119580 IAA biosynthesis II none Avena sativa AVESA.00001b.r3.4Dg0003842 R-ASA-8858194 AVESA.00001b.r3.4Dg0003842 [cytosol] R-ASA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119556 Choline biosynthesis I none Avena sativa AVESA.00001b.r3.4Dg0003866 R-ASA-1126436-3 AVESA.00001b.r3.4Dg0003866 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.4Dg0003877 R-ASA-1124560 AVESA.00001b.r3.4Dg0003877 [cytosol] R-ASA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119563 UDP-D-xylose biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0003877 R-ASA-9681903 AVESA.00001b.r3.4Dg0003877 [Golgi lumen] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.4Dg0003877 R-ASA-1124560 AVESA.00001b.r3.4Dg0003877 [cytosol] R-ASA-5654894 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654894 UDP-D-apiose biosynthesis none Avena sativa AVESA.00001b.r3.4Dg0003913 R-ASA-9826691 AVESA.00001b.r3.4Dg0003913 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.5Ag0000013 R-ASA-9658681-3 AVESA.00001b.r3.5Ag0000013 [plasma membrane] R-ASA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119567 Beta-alanine biosynthesis I none Avena sativa AVESA.00001b.r3.5Ag0000021 R-ASA-5606521 AVESA.00001b.r3.5Ag0000021 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.5Ag0000029 R-ASA-1127723 AVESA.00001b.r3.5Ag0000029 [cytosol] R-ASA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119331 Cysteine biosynthesis I none Avena sativa AVESA.00001b.r3.5Ag0000041 R-ASA-9826620-2 HOX12/ OsGT1 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.5Ag0000041 R-ASA-9826620-2 HOX12/ OsGT1 [nucleoplasm] R-ASA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Avena sativa AVESA.00001b.r3.5Ag0000062 R-ASA-5654859-3 AVESA.00001b.r3.5Ag0000062 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.5Ag0000062 R-ASA-5654859-3 AVESA.00001b.r3.5Ag0000062 [nucleoplasm] R-ASA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Avena sativa AVESA.00001b.r3.5Ag0000075 R-ASA-9640716-3 AVESA.00001b.r3.5Ag0000075 [nucleoplasm] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.5Ag0000075 R-ASA-9640716-3 AVESA.00001b.r3.5Ag0000075 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.5Ag0000075 R-ASA-9640716-3 AVESA.00001b.r3.5Ag0000075 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.5Ag0000118 R-ASA-9645944-2 AVESA.00001b.r3.5Ag0000118 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.5Ag0000145 R-ASA-1129111-3 AVESA.00001b.r3.5Ag0000145 [cytosol] R-ASA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119349 S-methylmethionine cycle none Avena sativa AVESA.00001b.r3.5Ag0000145 R-ASA-1129111-3 AVESA.00001b.r3.5Ag0000145 [cytosol] R-ASA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119400 Methionine biosynthesis II none Avena sativa AVESA.00001b.r3.5Ag0000156 R-ASA-1127192-2 AVESA.00001b.r3.5Ag0000156 [cytosol] R-ASA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119291 Nitrate assimilation none Avena sativa AVESA.00001b.r3.5Ag0000156 R-ASA-1127192-2 AVESA.00001b.r3.5Ag0000156 [cytosol] R-ASA-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119293 Glutamine biosynthesis I none Avena sativa AVESA.00001b.r3.5Ag0000156 R-ASA-1127192-2 AVESA.00001b.r3.5Ag0000156 [cytosol] R-ASA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119443 Ammonia assimilation cycle none Avena sativa AVESA.00001b.r3.5Ag0000163 R-ASA-1128804-2 AVESA.00001b.r3.5Ag0000163 [cytosol] R-ASA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119516 Trehalose biosynthesis I none Avena sativa AVESA.00001b.r3.5Ag0000188 R-ASA-1122974-2 AVESA.00001b.r3.5Ag0000188 [mitochondrial matrix] R-ASA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119479 Valine degradation none Avena sativa AVESA.00001b.r3.5Ag0000192 R-ASA-9639049-3 AVESA.00001b.r3.5Ag0000192 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.5Ag0000227 R-ASA-9025809 AVESA.00001b.r3.5Ag0000227 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0000270 R-ASA-1125870 AVESA.00001b.r3.5Ag0000270 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.5Ag0000270 R-ASA-1125870 AVESA.00001b.r3.5Ag0000270 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.5Ag0000270 R-ASA-5606480 AVESA.00001b.r3.5Ag0000270 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.5Ag0000288 R-ASA-1126421-2 AVESA.00001b.r3.5Ag0000288 [cytosol] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0000288 R-ASA-1126421-2 AVESA.00001b.r3.5Ag0000288 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.5Ag0000307 R-ASA-5632157-3 AVESA.00001b.r3.5Ag0000307 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.5Ag0000307 R-ASA-5632157-3 AVESA.00001b.r3.5Ag0000307 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.5Ag0000308 R-ASA-1130456-4 AVESA.00001b.r3.5Ag0000308 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0000322 R-ASA-1125584-3 AVESA.00001b.r3.5Ag0000322 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.5Ag0000339 R-ASA-9626449-3 AVESA.00001b.r3.5Ag0000339 [cytosol] R-ASA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9626305 Regulatory network of nutrient accumulation none Avena sativa AVESA.00001b.r3.5Ag0000347 R-ASA-9025430 AVESA.00001b.r3.5Ag0000347 [endoplasmic reticulum membrane] R-ASA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119325 Sphingolipid metabolism none Avena sativa AVESA.00001b.r3.5Ag0000349 R-ASA-1123998-2 AVESA.00001b.r3.5Ag0000349 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0000357 R-ASA-6787198-3 AVESA.00001b.r3.5Ag0000357 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Ag0000371 R-ASA-1127082-3 AVESA.00001b.r3.5Ag0000371 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.5Ag0000383 R-ASA-4415078-3 AVESA.00001b.r3.5Ag0000383 [cytosol] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.5Ag0000416 R-ASA-1126799 AVESA.00001b.r3.5Ag0000416 [cytosol] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0000416 R-ASA-1126799 AVESA.00001b.r3.5Ag0000416 [cytosol] R-ASA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119563 UDP-D-xylose biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0000416 R-ASA-1126799 AVESA.00001b.r3.5Ag0000416 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.5Ag0000426 R-ASA-9658613-3 AVESA.00001b.r3.5Ag0000426 [plastid stroma] R-ASA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119263 Arginine biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0000426 R-ASA-9658613-3 AVESA.00001b.r3.5Ag0000426 [plastid stroma] R-ASA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119622 Arginine biosynthesis II (acetyl cycle) none Avena sativa AVESA.00001b.r3.5Ag0000460 R-ASA-1130032-3 AVESA.00001b.r3.5Ag0000460 [mitochondrial inner membrane] R-ASA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119260 Cardiolipin biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0000462 R-ASA-8933708-2 AVESA.00001b.r3.5Ag0000462 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.5Ag0000469 R-ASA-1127140 AVESA.00001b.r3.5Ag0000469 [cytosol] R-ASA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119403 Removal of superoxide radicals none Avena sativa AVESA.00001b.r3.5Ag0000470 R-ASA-9675423-2 AVESA.00001b.r3.5Ag0000470 [nucleoplasm] R-ASA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675508 Root elongation none Avena sativa AVESA.00001b.r3.5Ag0000470 R-ASA-9930290-2 MPK5 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.5Ag0000471 R-ASA-1126138 AVESA.00001b.r3.5Ag0000471 [cytosol] R-ASA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119389 Phenylalanine biosynthesis I none Avena sativa AVESA.00001b.r3.5Ag0000505 R-ASA-9025294-2 AVESA.00001b.r3.5Ag0000505 [cytosol] R-ASA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119267 Phenylalanine degradation III none Avena sativa AVESA.00001b.r3.5Ag0000505 R-ASA-1123342-2 AVESA.00001b.r3.5Ag0000505 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.5Ag0000505 R-ASA-1123342-2 AVESA.00001b.r3.5Ag0000505 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.5Ag0000505 R-ASA-1123342-2 AVESA.00001b.r3.5Ag0000505 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0000506 R-ASA-9025294-3 AVESA.00001b.r3.5Ag0000506 [cytosol] R-ASA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119267 Phenylalanine degradation III none Avena sativa AVESA.00001b.r3.5Ag0000506 R-ASA-1123342-3 AVESA.00001b.r3.5Ag0000506 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.5Ag0000506 R-ASA-1123342-3 AVESA.00001b.r3.5Ag0000506 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.5Ag0000506 R-ASA-1123342-3 AVESA.00001b.r3.5Ag0000506 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0000539 R-ASA-5606478-2 AVESA.00001b.r3.5Ag0000539 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.5Ag0000540 R-ASA-9639810 AVESA.00001b.r3.5Ag0000540 [cell wall] R-ASA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639861 Development of root hair none Avena sativa AVESA.00001b.r3.5Ag0000549 R-ASA-1122726 AVESA.00001b.r3.5Ag0000549 [cytosol] R-ASA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119265 Tetrahydrofolate biosynthesis I none Avena sativa AVESA.00001b.r3.5Ag0000549 R-ASA-1122726 AVESA.00001b.r3.5Ag0000549 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.5Ag0000572 R-ASA-5655071-3 AVESA.00001b.r3.5Ag0000572 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0000573 R-ASA-5655092 AVESA.00001b.r3.5Ag0000573 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0000581 R-ASA-9025712-10 AVESA.00001b.r3.5Ag0000581 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0000582 R-ASA-9025712-7 AVESA.00001b.r3.5Ag0000582 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0000592 R-ASA-8933856-2 AVESA.00001b.r3.5Ag0000592 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.5Ag0000592 R-ASA-8933748-2 AVESA.00001b.r3.5Ag0000592 [cytosol] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.5Ag0000592 R-ASA-8933856-2 AVESA.00001b.r3.5Ag0000592 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.5Ag0000592 R-ASA-8933856-2 AVESA.00001b.r3.5Ag0000592 [nucleoplasm] R-ASA-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924494 Gravity sensing and statolith sedimentation none Avena sativa AVESA.00001b.r3.5Ag0000592 R-ASA-8933856-2 AVESA.00001b.r3.5Ag0000592 [nucleoplasm] R-ASA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928995 Drought escape (DE) via ABA-dependent pathway none Avena sativa AVESA.00001b.r3.5Ag0000615 R-ASA-9031290 AVESA.00001b.r3.5Ag0000615 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.5Ag0000616 R-ASA-9031290-5 AVESA.00001b.r3.5Ag0000616 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.5Ag0000622 R-ASA-6788172 AVESA.00001b.r3.5Ag0000622 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Ag0000651 R-ASA-6787084 AVESA.00001b.r3.5Ag0000651 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Ag0000659 R-ASA-9930276-3 AVESA.00001b.r3.5Ag0000659 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.5Ag0000694 R-ASA-6787213 AVESA.00001b.r3.5Ag0000694 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Ag0000715 R-ASA-1126444-2 AVESA.00001b.r3.5Ag0000715 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.5Ag0000716 R-ASA-1126830-2 AVESA.00001b.r3.5Ag0000716 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.5Ag0000720 R-ASA-1126115-3 AVESA.00001b.r3.5Ag0000720 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.5Ag0000720 R-ASA-1126115-3 AVESA.00001b.r3.5Ag0000720 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0000811 R-ASA-1128534-3 AVESA.00001b.r3.5Ag0000811 [cytosol] R-ASA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119437 Glutathione redox reactions I none Avena sativa AVESA.00001b.r3.5Ag0000870 R-ASA-5225766-2 AVESA.00001b.r3.5Ag0000870 [nucleoplasm] R-ASA-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5225756 Ethylene mediated signaling none Avena sativa AVESA.00001b.r3.5Ag0000896 R-ASA-6787004 AVESA.00001b.r3.5Ag0000896 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Ag0000896 R-ASA-6786938 AVESA.00001b.r3.5Ag0000896 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Ag0000911 R-ASA-1129934 AVESA.00001b.r3.5Ag0000911 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0000914 R-ASA-9766892 SAPK1 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.5Ag0000916 R-ASA-9025230-2 AVESA.00001b.r3.5Ag0000916 [peroxisomal matrix] R-ASA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119407 Ureide biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0000923 R-ASA-1127804-2 AVESA.00001b.r3.5Ag0000923 [cytosol] R-ASA-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119513 Pinobanksin biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0000947 R-ASA-1124695 AVESA.00001b.r3.5Ag0000947 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.5Ag0000947 R-ASA-1124695 AVESA.00001b.r3.5Ag0000947 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0000973 R-ASA-9826635 PCF8 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.5Ag0000988 R-ASA-1124232-2 AVESA.00001b.r3.5Ag0000988 [cytosol] R-ASA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119341 Galactosylcyclitol biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0001041 R-ASA-1127274-3 AVESA.00001b.r3.5Ag0001041 [cytosol] R-ASA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119612 Cysteine degradation none Avena sativa AVESA.00001b.r3.5Ag0001047 R-ASA-1128594 AVESA.00001b.r3.5Ag0001047 [cytosol] R-ASA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119349 S-methylmethionine cycle none Avena sativa AVESA.00001b.r3.5Ag0001047 R-ASA-1128594 AVESA.00001b.r3.5Ag0001047 [cytosol] R-ASA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119400 Methionine biosynthesis II none Avena sativa AVESA.00001b.r3.5Ag0001079 R-ASA-9658563-3 AVESA.00001b.r3.5Ag0001079 [endoplasmic reticulum lumen] R-ASA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119502 Allantoin degradation none Avena sativa AVESA.00001b.r3.5Ag0001092 R-ASA-1125540-3 AVESA.00001b.r3.5Ag0001092 [cytosol] R-ASA-1119303 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119303 Pyridoxamine anabolism none Avena sativa AVESA.00001b.r3.5Ag0001092 R-ASA-1125540-3 AVESA.00001b.r3.5Ag0001092 [cytosol] R-ASA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119534 Pyridoxal 5'-phosphate salvage pathway none Avena sativa AVESA.00001b.r3.5Ag0001101 R-ASA-1129784-2 AVESA.00001b.r3.5Ag0001101 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.5Ag0001174 R-ASA-8879027-2 AVESA.00001b.r3.5Ag0001174 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.5Ag0001251 R-ASA-9611544-2 SPL11 [nucleoplasm] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.5Ag0001251 R-ASA-9611440-2 phospho-phosphorylated-SPL11 [nucleoplasm] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.5Ag0001312 R-ASA-9640745-2 AVESA.00001b.r3.5Ag0001312 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.5Ag0001312 R-ASA-9640745-2 AVESA.00001b.r3.5Ag0001312 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.5Ag0001312 R-ASA-9640745-2 AVESA.00001b.r3.5Ag0001312 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.5Ag0001324 R-ASA-1123894-2 AVESA.00001b.r3.5Ag0001324 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0001343 R-ASA-1128815-5 AVESA.00001b.r3.5Ag0001343 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.5Ag0001343 R-ASA-1128815-5 AVESA.00001b.r3.5Ag0001343 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0001355 R-ASA-9607149-2 AVESA.00001b.r3.5Ag0001355 [plasma membrane] R-ASA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9607185 Generation of superoxide radicals none Avena sativa AVESA.00001b.r3.5Ag0001355 R-ASA-9607094-2 phospho-AVESA.00001b.r3.5Ag0001355 [plasma membrane] R-ASA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9607185 Generation of superoxide radicals none Avena sativa AVESA.00001b.r3.5Ag0001396 R-ASA-9920304-3 AVESA.00001b.r3.5Ag0001396 [nucleoplasm] R-ASA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934108 Short day regulated expression of florigens none Avena sativa AVESA.00001b.r3.5Ag0001407 R-ASA-1129924 AVESA.00001b.r3.5Ag0001407 [cytosol] R-ASA-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119342 Gamma-glutamyl cycle none Avena sativa AVESA.00001b.r3.5Ag0001407 R-ASA-1129924 AVESA.00001b.r3.5Ag0001407 [cytosol] R-ASA-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119483 Glutathione biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0001429 R-ASA-1130036-3 AVESA.00001b.r3.5Ag0001429 [endoplasmic reticulum membrane] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.5Ag0001511 R-ASA-1127151 AVESA.00001b.r3.5Ag0001511 [cytosol] R-ASA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119384 NAD biosynthesis I (from aspartate) none Avena sativa AVESA.00001b.r3.5Ag0001575 R-ASA-9682527-3 AVESA.00001b.r3.5Ag0001575 [cytosol] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0001592 R-ASA-1122351-3 AVESA.00001b.r3.5Ag0001592 [cytosol] R-ASA-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119354 Asparagine biosynthesis III none Avena sativa AVESA.00001b.r3.5Ag0001592 R-ASA-5633281-3 AVESA.00001b.r3.5Ag0001592 [cytosol] R-ASA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119495 Citrulline biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0001592 R-ASA-1122351-3 AVESA.00001b.r3.5Ag0001592 [cytosol] R-ASA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119553 Asparagine biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0001646 R-ASA-9611889 AVESA.00001b.r3.5Ag0001646 [mitochondrial matrix] R-ASA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119479 Valine degradation none Avena sativa AVESA.00001b.r3.5Ag0001682 R-ASA-9675877 AVESA.00001b.r3.5Ag0001682 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.5Ag0001703 R-ASA-1125550 AVESA.00001b.r3.5Ag0001703 [cytosol] R-ASA-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119623 Acyl-CoA synthetase pathway none Avena sativa AVESA.00001b.r3.5Ag0001746 R-ASA-9640722 AVESA.00001b.r3.5Ag0001746 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.5Ag0001773 R-ASA-9608694 AVESA.00001b.r3.5Ag0001773 [cytosol] R-ASA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928831 Severe drought none Avena sativa AVESA.00001b.r3.5Ag0001773 R-ASA-9928774 AVESA.00001b.r3.5Ag0001773 [nucleoplasm] R-ASA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928831 Severe drought none Avena sativa AVESA.00001b.r3.5Ag0001781 R-ASA-5655070 AVESA.00001b.r3.5Ag0001781 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0001809 R-ASA-1129809-2 AVESA.00001b.r3.5Ag0001809 [mitochondrial inner membrane] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0001815 R-ASA-1127173-3 AVESA.00001b.r3.5Ag0001815 [cytosol] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0001825 R-ASA-1123943-3 AVESA.00001b.r3.5Ag0001825 [plastid] R-ASA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119365 Lysine degradation II none Avena sativa AVESA.00001b.r3.5Ag0001850 R-ASA-9025819-3 AVESA.00001b.r3.5Ag0001850 [plasma membrane] R-ASA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025727 Iron uptake and transport in root vascular system none Avena sativa AVESA.00001b.r3.5Ag0001858 R-ASA-1125839-3 AVESA.00001b.r3.5Ag0001858 [cytosol] R-ASA-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119386 UDP-N-acetylgalactosamine biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0001880 R-ASA-1126387-2 AVESA.00001b.r3.5Ag0001880 [cytosol] R-ASA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119295 Homoserine biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0001882 R-ASA-9645907-6 AVESA.00001b.r3.5Ag0001882 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.5Ag0001882 R-ASA-9645907-6 AVESA.00001b.r3.5Ag0001882 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.5Ag0001887 R-ASA-9826671-3 NAC77 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.5Ag0001975 R-ASA-1125804-4 AVESA.00001b.r3.5Ag0001975 [cytosol] R-ASA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119300 Glycolipid desaturation none Avena sativa AVESA.00001b.r3.5Ag0001977 R-ASA-5654797-4 AVESA.00001b.r3.5Ag0001977 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.5Ag0001992 R-ASA-5633270-2 AVESA.00001b.r3.5Ag0001992 [cytosol] R-ASA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119495 Citrulline biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0002036 R-ASA-9640671 AVESA.00001b.r3.5Ag0002036 [nucleoplasm] R-ASA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640760 G1 phase none Avena sativa AVESA.00001b.r3.5Ag0002036 R-ASA-9640671 AVESA.00001b.r3.5Ag0002036 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.5Ag0002072 R-ASA-9927723 AVESA.00001b.r3.5Ag0002072 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.5Ag0002110 R-ASA-1126998-4 AVESA.00001b.r3.5Ag0002110 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.5Ag0002111 R-ASA-1123161-4 AVESA.00001b.r3.5Ag0002111 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0002112 R-ASA-1123161-2 AVESA.00001b.r3.5Ag0002112 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0002113 R-ASA-1124959 AVESA.00001b.r3.5Ag0002113 [cytosol] R-ASA-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119623 Acyl-CoA synthetase pathway none Avena sativa AVESA.00001b.r3.5Ag0002127 R-ASA-1127491-2 AVESA.00001b.r3.5Ag0002127 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.5Ag0002159 R-ASA-5632251-3 AVESA.00001b.r3.5Ag0002159 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.5Ag0002172 R-ASA-1123557-3 AVESA.00001b.r3.5Ag0002172 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.5Ag0002172 R-ASA-1123557-3 AVESA.00001b.r3.5Ag0002172 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.5Ag0002172 R-ASA-1123557-3 AVESA.00001b.r3.5Ag0002172 [cytosol] R-ASA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119295 Homoserine biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0002172 R-ASA-5606479-3 AVESA.00001b.r3.5Ag0002172 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.5Ag0002180 R-ASA-1127443-3 AVESA.00001b.r3.5Ag0002180 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0002218 R-ASA-1122936-2 AVESA.00001b.r3.5Ag0002218 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.5Ag0002223 R-ASA-4415015 AVESA.00001b.r3.5Ag0002223 [cytosol] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.5Ag0002238 R-ASA-9826647-3 AVESA.00001b.r3.5Ag0002238 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.5Ag0002242 R-ASA-9826647 AVESA.00001b.r3.5Ag0002242 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.5Ag0002245 R-ASA-5083827 AVESA.00001b.r3.5Ag0002245 [mitochondrial matrix] R-ASA-1119319 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119319 Alanine biosynthesis III none Avena sativa AVESA.00001b.r3.5Ag0002245 R-ASA-5083827 AVESA.00001b.r3.5Ag0002245 [mitochondrial matrix] R-ASA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119612 Cysteine degradation none Avena sativa AVESA.00001b.r3.5Ag0002258 R-ASA-9639003-4 AVESA.00001b.r3.5Ag0002258 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.5Ag0002281 R-ASA-4752546 AVESA.00001b.r3.5Ag0002281 [plastid stroma] R-ASA-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119498 Phylloquinone biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0002282 R-ASA-6787276-2 AVESA.00001b.r3.5Ag0002282 [plastid stroma] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0002282 R-ASA-6787950-2 AVESA.00001b.r3.5Ag0002282 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Ag0002319 R-ASA-1125587-3 AVESA.00001b.r3.5Ag0002319 [cytosol] R-ASA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119379 Flavin biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0002321 R-ASA-9645938-4 AVESA.00001b.r3.5Ag0002321 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.5Ag0002321 R-ASA-9645938-4 AVESA.00001b.r3.5Ag0002321 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.5Ag0002322 R-ASA-9645938 AVESA.00001b.r3.5Ag0002322 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.5Ag0002322 R-ASA-9645938 AVESA.00001b.r3.5Ag0002322 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.5Ag0002335 R-ASA-1124905-4 AVESA.00001b.r3.5Ag0002335 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.5Ag0002367 R-ASA-9640729 AVESA.00001b.r3.5Ag0002367 [nucleoplasm] R-ASA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640760 G1 phase none Avena sativa AVESA.00001b.r3.5Ag0002367 R-ASA-9640729 AVESA.00001b.r3.5Ag0002367 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.5Ag0002380 R-ASA-6788036 AVESA.00001b.r3.5Ag0002380 [cytosol] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Ag0002380 R-ASA-1126611 AVESA.00001b.r3.5Ag0002380 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Ag0002391 R-ASA-1128160-2 AVESA.00001b.r3.5Ag0002391 [cytosol] R-ASA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119516 Trehalose biosynthesis I none Avena sativa AVESA.00001b.r3.5Ag0002403 R-ASA-6786969-2 AVESA.00001b.r3.5Ag0002403 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Ag0002403 R-ASA-6787121-2 AVESA.00001b.r3.5Ag0002403 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Ag0002403 R-ASA-6786969-2 AVESA.00001b.r3.5Ag0002403 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Ag0002408 R-ASA-1127738-3 AVESA.00001b.r3.5Ag0002408 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.5Ag0002408 R-ASA-1127738-3 AVESA.00001b.r3.5Ag0002408 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.5Ag0002408 R-ASA-5606514-3 AVESA.00001b.r3.5Ag0002408 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.5Ag0002410 R-ASA-2730728-2 AVESA.00001b.r3.5Ag0002410 [cytosol] R-ASA-1119413 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119413 Trans-zeatin biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0002465 R-ASA-6787876-3 AVESA.00001b.r3.5Ag0002465 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Ag0002466 R-ASA-6787876-4 AVESA.00001b.r3.5Ag0002466 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Ag0002467 R-ASA-6787948 AVESA.00001b.r3.5Ag0002467 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Ag0002473 R-ASA-1125953-3 AVESA.00001b.r3.5Ag0002473 [cytosol] R-ASA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119316 Phenylpropanoid biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0002496 R-ASA-1124334-3 AVESA.00001b.r3.5Ag0002496 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0002540 R-ASA-9607102-2 AVESA.00001b.r3.5Ag0002540 [mitochondrion] R-ASA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9607185 Generation of superoxide radicals none Avena sativa AVESA.00001b.r3.5Ag0002549 R-ASA-5679378-3 AVESA.00001b.r3.5Ag0002549 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.5Ag0002549 R-ASA-5679378-3 AVESA.00001b.r3.5Ag0002549 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Ag0002549 R-ASA-6787094-3 AVESA.00001b.r3.5Ag0002549 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Ag0002549 R-ASA-5679378-3 AVESA.00001b.r3.5Ag0002549 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Ag0002556 R-ASA-1124813 AVESA.00001b.r3.5Ag0002556 [mitochondrial matrix] R-ASA-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119337 Proline degradation none Avena sativa AVESA.00001b.r3.5Ag0002556 R-ASA-8986570 AVESA.00001b.r3.5Ag0002556 [mitochondrial matrix] R-ASA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119365 Lysine degradation II none Avena sativa AVESA.00001b.r3.5Ag0002556 R-ASA-9658682 AVESA.00001b.r3.5Ag0002556 [cytosol] R-ASA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119567 Beta-alanine biosynthesis I none Avena sativa AVESA.00001b.r3.5Ag0002594 R-ASA-1126542 AVESA.00001b.r3.5Ag0002594 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.5Ag0002594 R-ASA-1126542 AVESA.00001b.r3.5Ag0002594 [cytosol] R-ASA-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119617 Folate polyglutamylation I none Avena sativa AVESA.00001b.r3.5Ag0002600 R-ASA-5679470 AVESA.00001b.r3.5Ag0002600 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.5Ag0002613 R-ASA-1126380-3 AVESA.00001b.r3.5Ag0002613 [cytosol] R-ASA-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119609 Phaseic acid biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0002637 R-ASA-1123097-2 AVESA.00001b.r3.5Ag0002637 [cytosol] R-ASA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119341 Galactosylcyclitol biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0002639 R-ASA-9611489 LYP4 [plasma membrane] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.5Ag0002645 R-ASA-1122827-3 AVESA.00001b.r3.5Ag0002645 [cytosol] R-ASA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119334 Ethylene biosynthesis from methionine none Avena sativa AVESA.00001b.r3.5Ag0002668 R-ASA-1128980 AVESA.00001b.r3.5Ag0002668 [cytosol] R-ASA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119586 Cyanate degradation none Avena sativa AVESA.00001b.r3.5Ag0002676 R-ASA-2960195-3 AVESA.00001b.r3.5Ag0002676 [cytosol] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0002676 R-ASA-2960195-3 AVESA.00001b.r3.5Ag0002676 [cytosol] R-ASA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119570 Cytosolic glycolysis none Avena sativa AVESA.00001b.r3.5Ag0002677 R-ASA-9640777-2 AVESA.00001b.r3.5Ag0002677 [nucleoplasm] R-ASA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640760 G1 phase none Avena sativa AVESA.00001b.r3.5Ag0002677 R-ASA-9640777-2 AVESA.00001b.r3.5Ag0002677 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.5Ag0002692 R-ASA-9918264 ISA3 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0002705 R-ASA-1129078-3 AVESA.00001b.r3.5Ag0002705 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0002713 R-ASA-5632199 AVESA.00001b.r3.5Ag0002713 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.5Ag0002728 R-ASA-8987531 AVESA.00001b.r3.5Ag0002728 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.5Ag0002728 R-ASA-1125951 AVESA.00001b.r3.5Ag0002728 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.5Ag0002734 R-ASA-9607132-2 RBOHB [plasma membrane] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.5Ag0002734 R-ASA-9611529-2 phospho-phosphorylated-RBOHB [plasma membrane] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.5Ag0002790 R-ASA-6786917-2 AVESA.00001b.r3.5Ag0002790 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Ag0002791 R-ASA-9608743-2 AVESA.00001b.r3.5Ag0002791 [cytosol] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.5Ag0002791 R-ASA-9608705-2 AVESA.00001b.r3.5Ag0002791 [nucleoplasm] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.5Ag0002798 R-ASA-8868866-3 AVESA.00001b.r3.5Ag0002798 [endoplasmic reticulum membrane] R-ASA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8868949 Intracellular auxin transport none Avena sativa AVESA.00001b.r3.5Ag0002807 R-ASA-1125142-2 AVESA.00001b.r3.5Ag0002807 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.5Ag0002865 R-ASA-1129921 AVESA.00001b.r3.5Ag0002865 [cytosol] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0002865 R-ASA-1129921 AVESA.00001b.r3.5Ag0002865 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.5Ag0002873 R-ASA-8858081 AVESA.00001b.r3.5Ag0002873 [plasma membrane] R-ASA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8858053 Polar auxin transport none Avena sativa AVESA.00001b.r3.5Ag0002875 R-ASA-1124138-2 AVESA.00001b.r3.5Ag0002875 [cytosol] R-ASA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119394 Pantothenate and coenzyme A biosynthesis III none Avena sativa AVESA.00001b.r3.5Ag0002876 R-ASA-1124905-2 AVESA.00001b.r3.5Ag0002876 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.5Ag0002951 R-ASA-1129136-2 AVESA.00001b.r3.5Ag0002951 [plastid stroma] R-ASA-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Avena sativa AVESA.00001b.r3.5Ag0002977 R-ASA-9639010-2 AVESA.00001b.r3.5Ag0002977 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.5Ag0002979 R-ASA-6786926 AVESA.00001b.r3.5Ag0002979 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Ag0002981 R-ASA-9675866 AVESA.00001b.r3.5Ag0002981 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.5Ag0002981 R-ASA-9675866 AVESA.00001b.r3.5Ag0002981 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.5Ag0002981 R-ASA-9675866 AVESA.00001b.r3.5Ag0002981 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.5Ag0002996 R-ASA-9766868-10 DREB1A [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.5Ag0002997 R-ASA-9766868-5 DREB1A [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.5Ag0002998 R-ASA-9766868 DREB1A [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.5Ag0003015 R-ASA-1130394 AVESA.00001b.r3.5Ag0003015 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.5Ag0003034 R-ASA-1128678-4 AVESA.00001b.r3.5Ag0003034 [cytosol] R-ASA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119292 Cytokinins 7-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0003034 R-ASA-1128678-4 AVESA.00001b.r3.5Ag0003034 [cytosol] R-ASA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119375 Cytokinins 9-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0003034 R-ASA-1128678-4 AVESA.00001b.r3.5Ag0003034 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0003043 R-ASA-8933784 AVESA.00001b.r3.5Ag0003043 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.5Ag0003048 R-ASA-1127502 AVESA.00001b.r3.5Ag0003048 [cytosol] R-ASA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119394 Pantothenate and coenzyme A biosynthesis III none Avena sativa AVESA.00001b.r3.5Ag0003062 R-ASA-1128877 AVESA.00001b.r3.5Ag0003062 [plastid stroma] R-ASA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119424 Plastid glycolysis none Avena sativa AVESA.00001b.r3.5Ag0003062 R-ASA-1128877 AVESA.00001b.r3.5Ag0003062 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.5Ag0003083 R-ASA-1126440-3 AVESA.00001b.r3.5Ag0003083 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.5Ag0003085 R-ASA-9645954 AVESA.00001b.r3.5Ag0003085 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.5Ag0003089 R-ASA-9618156-2 AVESA.00001b.r3.5Ag0003089 [plasma membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.5Ag0003116 R-ASA-1129187-3 AVESA.00001b.r3.5Ag0003116 [cytosol] R-ASA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119276 Choline biosynthesis III none Avena sativa AVESA.00001b.r3.5Ag0003182 R-ASA-1124095-5 AVESA.00001b.r3.5Ag0003182 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.5Ag0003183 R-ASA-1124095-4 AVESA.00001b.r3.5Ag0003183 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.5Ag0003188 R-ASA-1123525 AVESA.00001b.r3.5Ag0003188 [cytosol] R-ASA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119384 NAD biosynthesis I (from aspartate) none Avena sativa AVESA.00001b.r3.5Ag0003194 R-ASA-8868994 AVESA.00001b.r3.5Ag0003194 [endoplasmic reticulum membrane] R-ASA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8868949 Intracellular auxin transport none Avena sativa AVESA.00001b.r3.5Ag0003205 R-ASA-5679404 AVESA.00001b.r3.5Ag0003205 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.5Ag0003291 R-ASA-1129481 AVESA.00001b.r3.5Ag0003291 [cytosol] R-ASA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119389 Phenylalanine biosynthesis I none Avena sativa AVESA.00001b.r3.5Cg0000026 R-ASA-8987571 AVESA.00001b.r3.5Cg0000026 [peroxisomal matrix] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.5Cg0000044 R-ASA-6786987-3 AVESA.00001b.r3.5Cg0000044 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Cg0000046 R-ASA-1126107 AVESA.00001b.r3.5Cg0000046 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0000046 R-ASA-1126107 AVESA.00001b.r3.5Cg0000046 [cytosol] R-ASA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119618 13-LOX and 13-HPL pathway none Avena sativa AVESA.00001b.r3.5Cg0000067 R-ASA-1124496-2 AVESA.00001b.r3.5Cg0000067 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.5Cg0000070 R-ASA-1128511 AVESA.00001b.r3.5Cg0000070 [cytosol] R-ASA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119506 tyrosine degradation I none Avena sativa AVESA.00001b.r3.5Cg0000142 R-ASA-1124056 AVESA.00001b.r3.5Cg0000142 [cytosol] R-ASA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119394 Pantothenate and coenzyme A biosynthesis III none Avena sativa AVESA.00001b.r3.5Cg0000151 R-ASA-4827081-2 AVESA.00001b.r3.5Cg0000151 [plastid stroma] R-ASA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-4827054 Tetrapyrrole biosynthesis I none Avena sativa AVESA.00001b.r3.5Cg0000177 R-ASA-9611549 phospho-phosphorylated-CERK1 [plasma membrane] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.5Cg0000177 R-ASA-9611466 CERK1 [plasma membrane] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.5Cg0000179 R-ASA-9640763-2 AVESA.00001b.r3.5Cg0000179 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.5Cg0000179 R-ASA-9640885-2 phospho-AVESA.00001b.r3.5Cg0000179 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.5Cg0000196 R-ASA-1124791-2 AVESA.00001b.r3.5Cg0000196 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.5Cg0000229 R-ASA-1130277-2 AVESA.00001b.r3.5Cg0000229 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.5Cg0000255 R-ASA-1123786 AVESA.00001b.r3.5Cg0000255 R-ASA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119403 Removal of superoxide radicals none Avena sativa AVESA.00001b.r3.5Cg0000283 R-ASA-1127357-2 AVESA.00001b.r3.5Cg0000283 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.5Cg0000283 R-ASA-1127357-2 AVESA.00001b.r3.5Cg0000283 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.5Cg0000316 R-ASA-1127414 AVESA.00001b.r3.5Cg0000316 [cytosol] R-ASA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119265 Tetrahydrofolate biosynthesis I none Avena sativa AVESA.00001b.r3.5Cg0000320 R-ASA-1127733-3 AVESA.00001b.r3.5Cg0000320 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.5Cg0000320 R-ASA-1127733-3 AVESA.00001b.r3.5Cg0000320 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0000329 R-ASA-8868961 AVESA.00001b.r3.5Cg0000329 [plant-type vacuole membrane] R-ASA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8868949 Intracellular auxin transport none Avena sativa AVESA.00001b.r3.5Cg0000335 R-ASA-1126828-2 AVESA.00001b.r3.5Cg0000335 [plastid] R-ASA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119403 Removal of superoxide radicals none Avena sativa AVESA.00001b.r3.5Cg0000414 R-ASA-1125832 AVESA.00001b.r3.5Cg0000414 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0000416 R-ASA-5632192-3 AVESA.00001b.r3.5Cg0000416 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.5Cg0000466 R-ASA-1122843-3 AVESA.00001b.r3.5Cg0000466 [cytosol] R-ASA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119458 Glutamate degradation none Avena sativa AVESA.00001b.r3.5Cg0000467 R-ASA-9645866 AVESA.00001b.r3.5Cg0000467 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.5Cg0000467 R-ASA-9645866 AVESA.00001b.r3.5Cg0000467 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.5Cg0000471 R-ASA-1127880 AVESA.00001b.r3.5Cg0000471 [cytosol] R-ASA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119291 Nitrate assimilation none Avena sativa AVESA.00001b.r3.5Cg0000473 R-ASA-1122836 AVESA.00001b.r3.5Cg0000473 [cytosol] R-ASA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119586 Cyanate degradation none Avena sativa AVESA.00001b.r3.5Cg0000484 R-ASA-1130153-2 AVESA.00001b.r3.5Cg0000484 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0000484 R-ASA-6787115-2 AVESA.00001b.r3.5Cg0000484 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Cg0000487 R-ASA-5631958 AVESA.00001b.r3.5Cg0000487 [cytosol] R-ASA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119289 Arginine degradation none Avena sativa AVESA.00001b.r3.5Cg0000487 R-ASA-1122345 AVESA.00001b.r3.5Cg0000487 [cytosol] R-ASA-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119318 Proline biosynthesis V (from arginine) none Avena sativa AVESA.00001b.r3.5Cg0000487 R-ASA-1122345 AVESA.00001b.r3.5Cg0000487 [cytosol] R-ASA-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119631 Proline biosynthesis I none Avena sativa AVESA.00001b.r3.5Cg0000535 R-ASA-1128200 AVESA.00001b.r3.5Cg0000535 [cytosol] R-ASA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119316 Phenylpropanoid biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0000538 R-ASA-1123148 AVESA.00001b.r3.5Cg0000538 [cytosol] R-ASA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119300 Glycolipid desaturation none Avena sativa AVESA.00001b.r3.5Cg0000635 R-ASA-5655107-3 AVESA.00001b.r3.5Cg0000635 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0000638 R-ASA-5655107 AVESA.00001b.r3.5Cg0000638 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0000661 R-ASA-9611544-3 SPL11 [nucleoplasm] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.5Cg0000661 R-ASA-9611440-3 phospho-phosphorylated-SPL11 [nucleoplasm] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.5Cg0000723 R-ASA-9640745 AVESA.00001b.r3.5Cg0000723 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.5Cg0000723 R-ASA-9640745 AVESA.00001b.r3.5Cg0000723 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.5Cg0000723 R-ASA-9640745 AVESA.00001b.r3.5Cg0000723 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.5Cg0000741 R-ASA-1123894-3 AVESA.00001b.r3.5Cg0000741 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0000799 R-ASA-9607149-3 AVESA.00001b.r3.5Cg0000799 [plasma membrane] R-ASA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9607185 Generation of superoxide radicals none Avena sativa AVESA.00001b.r3.5Cg0000799 R-ASA-9607094-3 phospho-AVESA.00001b.r3.5Cg0000799 [plasma membrane] R-ASA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9607185 Generation of superoxide radicals none Avena sativa AVESA.00001b.r3.5Cg0000838 R-ASA-9920304 AVESA.00001b.r3.5Cg0000838 [nucleoplasm] R-ASA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934108 Short day regulated expression of florigens none Avena sativa AVESA.00001b.r3.5Cg0000857 R-ASA-1129924-3 AVESA.00001b.r3.5Cg0000857 [cytosol] R-ASA-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119342 Gamma-glutamyl cycle none Avena sativa AVESA.00001b.r3.5Cg0000857 R-ASA-1129924-3 AVESA.00001b.r3.5Cg0000857 [cytosol] R-ASA-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119483 Glutathione biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0000898 R-ASA-1130036 AVESA.00001b.r3.5Cg0000898 [endoplasmic reticulum membrane] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.5Cg0000900 R-ASA-9916125 AVESA.00001b.r3.5Cg0000900 [nucleoplasm] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.5Cg0000900 R-ASA-9916231 AVESA.00001b.r3.5Cg0000900 [cytosol] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.5Cg0000900 R-ASA-9916199 phospho-AVESA.00001b.r3.5Cg0000900 [cytosol] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.5Cg0001005 R-ASA-1122351-2 AVESA.00001b.r3.5Cg0001005 [cytosol] R-ASA-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119354 Asparagine biosynthesis III none Avena sativa AVESA.00001b.r3.5Cg0001005 R-ASA-5633281-2 AVESA.00001b.r3.5Cg0001005 [cytosol] R-ASA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119495 Citrulline biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0001005 R-ASA-1122351-2 AVESA.00001b.r3.5Cg0001005 [cytosol] R-ASA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119553 Asparagine biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0001093 R-ASA-1127151-3 AVESA.00001b.r3.5Cg0001093 [cytosol] R-ASA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119384 NAD biosynthesis I (from aspartate) none Avena sativa AVESA.00001b.r3.5Cg0001162 R-ASA-9611889-3 AVESA.00001b.r3.5Cg0001162 [mitochondrial matrix] R-ASA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119479 Valine degradation none Avena sativa AVESA.00001b.r3.5Cg0001163 R-ASA-9611889-2 AVESA.00001b.r3.5Cg0001163 [mitochondrial matrix] R-ASA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119479 Valine degradation none Avena sativa AVESA.00001b.r3.5Cg0001211 R-ASA-1125550-3 AVESA.00001b.r3.5Cg0001211 [cytosol] R-ASA-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119623 Acyl-CoA synthetase pathway none Avena sativa AVESA.00001b.r3.5Cg0001263 R-ASA-9640722-2 AVESA.00001b.r3.5Cg0001263 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.5Cg0001301 R-ASA-5655070-3 AVESA.00001b.r3.5Cg0001301 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0001338 R-ASA-1129809 AVESA.00001b.r3.5Cg0001338 [mitochondrial inner membrane] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0001348 R-ASA-1127173 AVESA.00001b.r3.5Cg0001348 [cytosol] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0001357 R-ASA-1123943-2 AVESA.00001b.r3.5Cg0001357 [plastid] R-ASA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119365 Lysine degradation II none Avena sativa AVESA.00001b.r3.5Cg0001376 R-ASA-9025819-2 AVESA.00001b.r3.5Cg0001376 [plasma membrane] R-ASA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025727 Iron uptake and transport in root vascular system none Avena sativa AVESA.00001b.r3.5Cg0001386 R-ASA-1125839-4 AVESA.00001b.r3.5Cg0001386 [cytosol] R-ASA-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119386 UDP-N-acetylgalactosamine biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0001412 R-ASA-1126387-3 AVESA.00001b.r3.5Cg0001412 [cytosol] R-ASA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119295 Homoserine biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0001414 R-ASA-9645907-3 AVESA.00001b.r3.5Cg0001414 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.5Cg0001414 R-ASA-9645907-3 AVESA.00001b.r3.5Cg0001414 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.5Cg0001420 R-ASA-9826671 NAC77 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.5Cg0001422 R-ASA-9636827 AVESA.00001b.r3.5Cg0001422 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.5Cg0001531 R-ASA-1125804-2 AVESA.00001b.r3.5Cg0001531 [cytosol] R-ASA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119300 Glycolipid desaturation none Avena sativa AVESA.00001b.r3.5Cg0001547 R-ASA-5633270 AVESA.00001b.r3.5Cg0001547 [cytosol] R-ASA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119495 Citrulline biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0001586 R-ASA-1125701-4 AVESA.00001b.r3.5Cg0001586 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0001586 R-ASA-1125701-4 AVESA.00001b.r3.5Cg0001586 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0001586 R-ASA-1125701-4 AVESA.00001b.r3.5Cg0001586 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.5Cg0001647 R-ASA-9927723-2 AVESA.00001b.r3.5Cg0001647 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.5Cg0001678 R-ASA-1126998-3 AVESA.00001b.r3.5Cg0001678 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.5Cg0001693 R-ASA-1123161-3 AVESA.00001b.r3.5Cg0001693 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0001695 R-ASA-1123161 AVESA.00001b.r3.5Cg0001695 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0001696 R-ASA-1124959-3 AVESA.00001b.r3.5Cg0001696 [cytosol] R-ASA-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119623 Acyl-CoA synthetase pathway none Avena sativa AVESA.00001b.r3.5Cg0001708 R-ASA-1127491 AVESA.00001b.r3.5Cg0001708 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.5Cg0001724 R-ASA-1126307-4 AVESA.00001b.r3.5Cg0001724 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0001746 R-ASA-5632251-2 AVESA.00001b.r3.5Cg0001746 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.5Cg0001761 R-ASA-1123557-2 AVESA.00001b.r3.5Cg0001761 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.5Cg0001761 R-ASA-1123557-2 AVESA.00001b.r3.5Cg0001761 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.5Cg0001761 R-ASA-1123557-2 AVESA.00001b.r3.5Cg0001761 [cytosol] R-ASA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119295 Homoserine biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0001761 R-ASA-5606479-2 AVESA.00001b.r3.5Cg0001761 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.5Cg0001771 R-ASA-1127443 AVESA.00001b.r3.5Cg0001771 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0001810 R-ASA-1122936 AVESA.00001b.r3.5Cg0001810 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.5Cg0001834 R-ASA-9826647-5 AVESA.00001b.r3.5Cg0001834 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.5Cg0001843 R-ASA-5083827-3 AVESA.00001b.r3.5Cg0001843 [mitochondrial matrix] R-ASA-1119319 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119319 Alanine biosynthesis III none Avena sativa AVESA.00001b.r3.5Cg0001843 R-ASA-5083827-3 AVESA.00001b.r3.5Cg0001843 [mitochondrial matrix] R-ASA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119612 Cysteine degradation none Avena sativa AVESA.00001b.r3.5Cg0001860 R-ASA-9639003-2 AVESA.00001b.r3.5Cg0001860 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.5Cg0001878 R-ASA-6787276 AVESA.00001b.r3.5Cg0001878 [plastid stroma] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0001878 R-ASA-6787950 AVESA.00001b.r3.5Cg0001878 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Cg0001903 R-ASA-9684723-5 AVESA.00001b.r3.5Cg0001903 [cytosol] R-ASA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609102 Flower development none Avena sativa AVESA.00001b.r3.5Cg0001911 R-ASA-1125587-2 AVESA.00001b.r3.5Cg0001911 [cytosol] R-ASA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119379 Flavin biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0001976 R-ASA-6788036-2 AVESA.00001b.r3.5Cg0001976 [cytosol] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Cg0001976 R-ASA-1126611-2 AVESA.00001b.r3.5Cg0001976 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Cg0001993 R-ASA-1128160-3 AVESA.00001b.r3.5Cg0001993 [cytosol] R-ASA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119516 Trehalose biosynthesis I none Avena sativa AVESA.00001b.r3.5Cg0002006 R-ASA-6786969 AVESA.00001b.r3.5Cg0002006 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Cg0002006 R-ASA-6787121 AVESA.00001b.r3.5Cg0002006 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Cg0002006 R-ASA-6786969 AVESA.00001b.r3.5Cg0002006 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Cg0002014 R-ASA-1127738 AVESA.00001b.r3.5Cg0002014 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.5Cg0002014 R-ASA-1127738 AVESA.00001b.r3.5Cg0002014 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.5Cg0002014 R-ASA-5606514 AVESA.00001b.r3.5Cg0002014 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.5Cg0002021 R-ASA-6787876-5 AVESA.00001b.r3.5Cg0002021 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Cg0002022 R-ASA-6787876-2 AVESA.00001b.r3.5Cg0002022 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Cg0002083 R-ASA-2730728-3 AVESA.00001b.r3.5Cg0002083 [cytosol] R-ASA-1119413 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119413 Trans-zeatin biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0002086 R-ASA-1125953-2 AVESA.00001b.r3.5Cg0002086 [cytosol] R-ASA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119316 Phenylpropanoid biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0002104 R-ASA-1124334-2 AVESA.00001b.r3.5Cg0002104 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0002149 R-ASA-1123046 AVESA.00001b.r3.5Cg0002149 [cytosol] R-ASA-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119386 UDP-N-acetylgalactosamine biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0002152 R-ASA-9607102 AVESA.00001b.r3.5Cg0002152 [mitochondrion] R-ASA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9607185 Generation of superoxide radicals none Avena sativa AVESA.00001b.r3.5Cg0002163 R-ASA-5679378-2 AVESA.00001b.r3.5Cg0002163 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.5Cg0002163 R-ASA-5679378-2 AVESA.00001b.r3.5Cg0002163 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Cg0002163 R-ASA-6787094-2 AVESA.00001b.r3.5Cg0002163 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Cg0002163 R-ASA-5679378-2 AVESA.00001b.r3.5Cg0002163 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Cg0002172 R-ASA-1124813-2 AVESA.00001b.r3.5Cg0002172 [mitochondrial matrix] R-ASA-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119337 Proline degradation none Avena sativa AVESA.00001b.r3.5Cg0002172 R-ASA-8986570-2 AVESA.00001b.r3.5Cg0002172 [mitochondrial matrix] R-ASA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119365 Lysine degradation II none Avena sativa AVESA.00001b.r3.5Cg0002172 R-ASA-9658682-2 AVESA.00001b.r3.5Cg0002172 [cytosol] R-ASA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119567 Beta-alanine biosynthesis I none Avena sativa AVESA.00001b.r3.5Cg0002218 R-ASA-1126542-2 AVESA.00001b.r3.5Cg0002218 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.5Cg0002218 R-ASA-1126542-2 AVESA.00001b.r3.5Cg0002218 [cytosol] R-ASA-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119617 Folate polyglutamylation I none Avena sativa AVESA.00001b.r3.5Cg0002225 R-ASA-1122827-2 AVESA.00001b.r3.5Cg0002225 [cytosol] R-ASA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119334 Ethylene biosynthesis from methionine none Avena sativa AVESA.00001b.r3.5Cg0002230 R-ASA-1123097 AVESA.00001b.r3.5Cg0002230 [cytosol] R-ASA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119341 Galactosylcyclitol biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0002254 R-ASA-1126380-2 AVESA.00001b.r3.5Cg0002254 [cytosol] R-ASA-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119609 Phaseic acid biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0002286 R-ASA-1128980-3 AVESA.00001b.r3.5Cg0002286 [cytosol] R-ASA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119586 Cyanate degradation none Avena sativa AVESA.00001b.r3.5Cg0002289 R-ASA-2960195-2 AVESA.00001b.r3.5Cg0002289 [cytosol] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0002289 R-ASA-2960195-2 AVESA.00001b.r3.5Cg0002289 [cytosol] R-ASA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119570 Cytosolic glycolysis none Avena sativa AVESA.00001b.r3.5Cg0002290 R-ASA-9640777-4 AVESA.00001b.r3.5Cg0002290 [nucleoplasm] R-ASA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640760 G1 phase none Avena sativa AVESA.00001b.r3.5Cg0002290 R-ASA-9640777-4 AVESA.00001b.r3.5Cg0002290 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.5Cg0002291 R-ASA-9640777 AVESA.00001b.r3.5Cg0002291 [nucleoplasm] R-ASA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640760 G1 phase none Avena sativa AVESA.00001b.r3.5Cg0002291 R-ASA-9640777 AVESA.00001b.r3.5Cg0002291 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.5Cg0002303 R-ASA-9918264-2 ISA3 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0002329 R-ASA-1129600 AVESA.00001b.r3.5Cg0002329 [cytosol] R-ASA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119407 Ureide biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0002380 R-ASA-9640689 AVESA.00001b.r3.5Cg0002380 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.5Cg0002380 R-ASA-9640689 AVESA.00001b.r3.5Cg0002380 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.5Cg0002380 R-ASA-9640689 AVESA.00001b.r3.5Cg0002380 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.5Cg0002401 R-ASA-6786917-3 AVESA.00001b.r3.5Cg0002401 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Cg0002411 R-ASA-8868866 AVESA.00001b.r3.5Cg0002411 [endoplasmic reticulum membrane] R-ASA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8868949 Intracellular auxin transport none Avena sativa AVESA.00001b.r3.5Cg0002412 R-ASA-8868866-2 AVESA.00001b.r3.5Cg0002412 [endoplasmic reticulum membrane] R-ASA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8868949 Intracellular auxin transport none Avena sativa AVESA.00001b.r3.5Cg0002419 R-ASA-1125142-3 AVESA.00001b.r3.5Cg0002419 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.5Cg0002481 R-ASA-1129921-3 AVESA.00001b.r3.5Cg0002481 [cytosol] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0002481 R-ASA-1129921-3 AVESA.00001b.r3.5Cg0002481 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.5Cg0002494 R-ASA-8858081-2 AVESA.00001b.r3.5Cg0002494 [plasma membrane] R-ASA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8858053 Polar auxin transport none Avena sativa AVESA.00001b.r3.5Cg0002496 R-ASA-1124138 AVESA.00001b.r3.5Cg0002496 [cytosol] R-ASA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119394 Pantothenate and coenzyme A biosynthesis III none Avena sativa AVESA.00001b.r3.5Cg0002497 R-ASA-1124905 AVESA.00001b.r3.5Cg0002497 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.5Cg0002570 R-ASA-9639010 AVESA.00001b.r3.5Cg0002570 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.5Cg0002574 R-ASA-6786926-3 AVESA.00001b.r3.5Cg0002574 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Cg0002576 R-ASA-9675866-2 AVESA.00001b.r3.5Cg0002576 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.5Cg0002576 R-ASA-9675866-2 AVESA.00001b.r3.5Cg0002576 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.5Cg0002576 R-ASA-9675866-2 AVESA.00001b.r3.5Cg0002576 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.5Cg0002587 R-ASA-9766868-4 DREB1A [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.5Cg0002588 R-ASA-9766868-11 DREB1A [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.5Cg0002591 R-ASA-9766868-7 DREB1A [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.5Cg0002630 R-ASA-8933784-2 AVESA.00001b.r3.5Cg0002630 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.5Cg0002633 R-ASA-1127502-3 AVESA.00001b.r3.5Cg0002633 [cytosol] R-ASA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119394 Pantothenate and coenzyme A biosynthesis III none Avena sativa AVESA.00001b.r3.5Cg0002643 R-ASA-1128877-3 AVESA.00001b.r3.5Cg0002643 [plastid stroma] R-ASA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119424 Plastid glycolysis none Avena sativa AVESA.00001b.r3.5Cg0002643 R-ASA-1128877-3 AVESA.00001b.r3.5Cg0002643 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.5Cg0002666 R-ASA-1126440-2 AVESA.00001b.r3.5Cg0002666 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0002669 R-ASA-9645954-2 AVESA.00001b.r3.5Cg0002669 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.5Cg0002672 R-ASA-9618156 AVESA.00001b.r3.5Cg0002672 [plasma membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.5Cg0002697 R-ASA-1129187-2 AVESA.00001b.r3.5Cg0002697 [cytosol] R-ASA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119276 Choline biosynthesis III none Avena sativa AVESA.00001b.r3.5Cg0002753 R-ASA-1124095-2 AVESA.00001b.r3.5Cg0002753 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.5Cg0002756 R-ASA-1123525-3 AVESA.00001b.r3.5Cg0002756 [cytosol] R-ASA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119384 NAD biosynthesis I (from aspartate) none Avena sativa AVESA.00001b.r3.5Cg0002760 R-ASA-8868994-3 AVESA.00001b.r3.5Cg0002760 [endoplasmic reticulum membrane] R-ASA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8868949 Intracellular auxin transport none Avena sativa AVESA.00001b.r3.5Cg0002773 R-ASA-5679404-2 AVESA.00001b.r3.5Cg0002773 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.5Cg0002845 R-ASA-1129481-2 AVESA.00001b.r3.5Cg0002845 [cytosol] R-ASA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119389 Phenylalanine biosynthesis I none Avena sativa AVESA.00001b.r3.5Cg0002902 R-ASA-5655090-4 AVESA.00001b.r3.5Cg0002902 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0002903 R-ASA-5655095-4 AVESA.00001b.r3.5Cg0002903 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0002904 R-ASA-5655095-2 AVESA.00001b.r3.5Cg0002904 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0002905 R-ASA-5655100-2 AVESA.00001b.r3.5Cg0002905 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0002923 R-ASA-9611524 LYP6 [plasma membrane] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.5Cg0002956 R-ASA-5608125-3 AVESA.00001b.r3.5Cg0002956 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.5Cg0002964 R-ASA-1124377-2 AVESA.00001b.r3.5Cg0002964 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.5Cg0002964 R-ASA-1124377-2 AVESA.00001b.r3.5Cg0002964 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0002966 R-ASA-9639003-5 AVESA.00001b.r3.5Cg0002966 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.5Cg0002991 R-ASA-9640675-2 AVESA.00001b.r3.5Cg0002991 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.5Cg0002991 R-ASA-9640675-2 AVESA.00001b.r3.5Cg0002991 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.5Cg0002997 R-ASA-1128173 AVESA.00001b.r3.5Cg0002997 [cytosol] R-ASA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119437 Glutathione redox reactions I none Avena sativa AVESA.00001b.r3.5Cg0003045 R-ASA-1129485-3 AVESA.00001b.r3.5Cg0003045 [cytosol] R-ASA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119341 Galactosylcyclitol biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0003048 R-ASA-1123042-2 AVESA.00001b.r3.5Cg0003048 R-ASA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119400 Methionine biosynthesis II none Avena sativa AVESA.00001b.r3.5Cg0003078 R-ASA-1125910-2 AVESA.00001b.r3.5Cg0003078 [plastid stroma] R-ASA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119367 Polyisoprenoid biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0003119 R-ASA-1128586-3 AVESA.00001b.r3.5Cg0003119 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0003143 R-ASA-5654840 AVESA.00001b.r3.5Cg0003143 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.5Cg0003143 R-ASA-5654840 AVESA.00001b.r3.5Cg0003143 [nucleoplasm] R-ASA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Avena sativa AVESA.00001b.r3.5Cg0003145 R-ASA-9675391 AVESA.00001b.r3.5Cg0003145 [nucleoplasm] R-ASA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675508 Root elongation none Avena sativa AVESA.00001b.r3.5Cg0003185 R-ASA-1129355-3 AVESA.00001b.r3.5Cg0003185 [plastid] R-ASA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119403 Removal of superoxide radicals none Avena sativa AVESA.00001b.r3.5Cg0003219 R-ASA-1129282-4 AVESA.00001b.r3.5Cg0003219 [cytosol] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0003219 R-ASA-1129282-4 AVESA.00001b.r3.5Cg0003219 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.5Cg0003226 R-ASA-8878987-3 AVESA.00001b.r3.5Cg0003226 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.5Cg0003241 R-ASA-1123211-3 AVESA.00001b.r3.5Cg0003241 [cytosol] R-ASA-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Avena sativa AVESA.00001b.r3.5Cg0003241 R-ASA-1123211-3 AVESA.00001b.r3.5Cg0003241 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0003241 R-ASA-1123211-3 AVESA.00001b.r3.5Cg0003241 [cytosol] R-ASA-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119439 Cholesterol biosynthesis III (via desmosterol) none Avena sativa AVESA.00001b.r3.5Cg0003241 R-ASA-1123211-3 AVESA.00001b.r3.5Cg0003241 [cytosol] R-ASA-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119559 Cholesterol biosynthesis I none Avena sativa AVESA.00001b.r3.5Cg0003245 R-ASA-1130247-2 AVESA.00001b.r3.5Cg0003245 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.5Cg0003290 R-ASA-1128298 AVESA.00001b.r3.5Cg0003290 [cytosol] R-ASA-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119271 Threonine degradation none Avena sativa AVESA.00001b.r3.5Cg0003290 R-ASA-1128298 AVESA.00001b.r3.5Cg0003290 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.5Cg0003304 R-ASA-9684771-5 AVESA.00001b.r3.5Cg0003304 [cytosol] R-ASA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609102 Flower development none Avena sativa AVESA.00001b.r3.5Cg0003312 R-ASA-5632261 AVESA.00001b.r3.5Cg0003312 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.5Cg0003329 R-ASA-9918210-3 granule-bound starch synthase 1 (GBSSI, or Waxy) [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0003329 R-ASA-9626344-3 AVESA.00001b.r3.5Cg0003329 [plastid stroma] R-ASA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9626305 Regulatory network of nutrient accumulation none Avena sativa AVESA.00001b.r3.5Cg0003332 R-ASA-1123832-2 AVESA.00001b.r3.5Cg0003332 [cytosol] R-ASA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119304 Putrescine biosynthesis II none Avena sativa AVESA.00001b.r3.5Cg0003332 R-ASA-1123832-2 AVESA.00001b.r3.5Cg0003332 [cytosol] R-ASA-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119447 Putrescine biosynthesis I none Avena sativa AVESA.00001b.r3.5Cg0003344 R-ASA-1123609-3 AVESA.00001b.r3.5Cg0003344 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0003354 R-ASA-9609343 AVESA.00001b.r3.5Cg0003354 [cytosol] R-ASA-9609352 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609352 Lycopene catabolism none Avena sativa AVESA.00001b.r3.5Cg0003356 R-ASA-1125766-3 AVESA.00001b.r3.5Cg0003356 [cytosol] R-ASA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119557 GA12 biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0003404 R-ASA-1127734-2 AVESA.00001b.r3.5Cg0003404 [cytosol] R-ASA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119506 tyrosine degradation I none Avena sativa AVESA.00001b.r3.5Cg0003415 R-ASA-6787880 AVESA.00001b.r3.5Cg0003415 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Cg0003427 R-ASA-1126636 AVESA.00001b.r3.5Cg0003427 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.5Cg0003428 R-ASA-8986767 AVESA.00001b.r3.5Cg0003428 [plastid] R-ASA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8986768 Anther and pollen development none Avena sativa AVESA.00001b.r3.5Dg0000031 R-ASA-1126799-2 AVESA.00001b.r3.5Dg0000031 [cytosol] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0000031 R-ASA-1126799-2 AVESA.00001b.r3.5Dg0000031 [cytosol] R-ASA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119563 UDP-D-xylose biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0000031 R-ASA-1126799-2 AVESA.00001b.r3.5Dg0000031 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.5Dg0000035 R-ASA-9658613-2 AVESA.00001b.r3.5Dg0000035 [plastid stroma] R-ASA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119263 Arginine biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0000035 R-ASA-9658613-2 AVESA.00001b.r3.5Dg0000035 [plastid stroma] R-ASA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119622 Arginine biosynthesis II (acetyl cycle) none Avena sativa AVESA.00001b.r3.5Dg0000063 R-ASA-1130032-2 AVESA.00001b.r3.5Dg0000063 [mitochondrial inner membrane] R-ASA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119260 Cardiolipin biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0000065 R-ASA-8933708 AVESA.00001b.r3.5Dg0000065 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.5Dg0000071 R-ASA-1127140-2 AVESA.00001b.r3.5Dg0000071 [cytosol] R-ASA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119403 Removal of superoxide radicals none Avena sativa AVESA.00001b.r3.5Dg0000072 R-ASA-9675423 AVESA.00001b.r3.5Dg0000072 [nucleoplasm] R-ASA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675508 Root elongation none Avena sativa AVESA.00001b.r3.5Dg0000072 R-ASA-9930290 MPK5 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.5Dg0000073 R-ASA-1126138-2 AVESA.00001b.r3.5Dg0000073 [cytosol] R-ASA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119389 Phenylalanine biosynthesis I none Avena sativa AVESA.00001b.r3.5Dg0000092 R-ASA-1129351 AVESA.00001b.r3.5Dg0000092 [cytosol] R-ASA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119300 Glycolipid desaturation none Avena sativa AVESA.00001b.r3.5Dg0000110 R-ASA-9025294-4 AVESA.00001b.r3.5Dg0000110 [cytosol] R-ASA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119267 Phenylalanine degradation III none Avena sativa AVESA.00001b.r3.5Dg0000110 R-ASA-1123342-4 AVESA.00001b.r3.5Dg0000110 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.5Dg0000110 R-ASA-1123342-4 AVESA.00001b.r3.5Dg0000110 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.5Dg0000110 R-ASA-1123342-4 AVESA.00001b.r3.5Dg0000110 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0000145 R-ASA-5606478 AVESA.00001b.r3.5Dg0000145 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.5Dg0000146 R-ASA-9639810-3 AVESA.00001b.r3.5Dg0000146 [cell wall] R-ASA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639861 Development of root hair none Avena sativa AVESA.00001b.r3.5Dg0000155 R-ASA-1122726-2 AVESA.00001b.r3.5Dg0000155 [cytosol] R-ASA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119265 Tetrahydrofolate biosynthesis I none Avena sativa AVESA.00001b.r3.5Dg0000155 R-ASA-1122726-2 AVESA.00001b.r3.5Dg0000155 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.5Dg0000178 R-ASA-5655071-2 AVESA.00001b.r3.5Dg0000178 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0000197 R-ASA-8933856-3 AVESA.00001b.r3.5Dg0000197 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.5Dg0000197 R-ASA-8933748-3 AVESA.00001b.r3.5Dg0000197 [cytosol] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.5Dg0000197 R-ASA-8933856-3 AVESA.00001b.r3.5Dg0000197 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.5Dg0000197 R-ASA-8933856-3 AVESA.00001b.r3.5Dg0000197 [nucleoplasm] R-ASA-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924494 Gravity sensing and statolith sedimentation none Avena sativa AVESA.00001b.r3.5Dg0000197 R-ASA-8933856-3 AVESA.00001b.r3.5Dg0000197 [nucleoplasm] R-ASA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928995 Drought escape (DE) via ABA-dependent pathway none Avena sativa AVESA.00001b.r3.5Dg0000217 R-ASA-9031290-3 AVESA.00001b.r3.5Dg0000217 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.5Dg0000218 R-ASA-9031290-6 AVESA.00001b.r3.5Dg0000218 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.5Dg0000225 R-ASA-6788172-3 AVESA.00001b.r3.5Dg0000225 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Dg0000239 R-ASA-9826700-2 AVESA.00001b.r3.5Dg0000239 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.5Dg0000251 R-ASA-6787084-2 AVESA.00001b.r3.5Dg0000251 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Dg0000267 R-ASA-9930276-2 AVESA.00001b.r3.5Dg0000267 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.5Dg0000295 R-ASA-6787213-2 AVESA.00001b.r3.5Dg0000295 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Dg0000305 R-ASA-8868888 AVESA.00001b.r3.5Dg0000305 [endoplasmic reticulum membrane] R-ASA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8868949 Intracellular auxin transport none Avena sativa AVESA.00001b.r3.5Dg0000324 R-ASA-1126444 AVESA.00001b.r3.5Dg0000324 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.5Dg0000325 R-ASA-1126830-3 AVESA.00001b.r3.5Dg0000325 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.5Dg0000327 R-ASA-1126115-2 AVESA.00001b.r3.5Dg0000327 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.5Dg0000327 R-ASA-1126115-2 AVESA.00001b.r3.5Dg0000327 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0000337 R-ASA-9918222 AVESA.00001b.r3.5Dg0000337 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0000401 R-ASA-1128534 AVESA.00001b.r3.5Dg0000401 [cytosol] R-ASA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119437 Glutathione redox reactions I none Avena sativa AVESA.00001b.r3.5Dg0000462 R-ASA-5225766-3 AVESA.00001b.r3.5Dg0000462 [nucleoplasm] R-ASA-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5225756 Ethylene mediated signaling none Avena sativa AVESA.00001b.r3.5Dg0000494 R-ASA-1129934-2 AVESA.00001b.r3.5Dg0000494 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0000497 R-ASA-9766892-3 SAPK1 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.5Dg0000499 R-ASA-9025230 AVESA.00001b.r3.5Dg0000499 [peroxisomal matrix] R-ASA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119407 Ureide biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0000508 R-ASA-1127804-3 AVESA.00001b.r3.5Dg0000508 [cytosol] R-ASA-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119513 Pinobanksin biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0000534 R-ASA-1124695-3 AVESA.00001b.r3.5Dg0000534 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.5Dg0000534 R-ASA-1124695-3 AVESA.00001b.r3.5Dg0000534 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0000545 R-ASA-1124797-5 AVESA.00001b.r3.5Dg0000545 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0000558 R-ASA-9826635-2 PCF8 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.5Dg0000577 R-ASA-1124232 AVESA.00001b.r3.5Dg0000577 [cytosol] R-ASA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119341 Galactosylcyclitol biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0000619 R-ASA-1127274-2 AVESA.00001b.r3.5Dg0000619 [cytosol] R-ASA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119612 Cysteine degradation none Avena sativa AVESA.00001b.r3.5Dg0000660 R-ASA-1129784-3 AVESA.00001b.r3.5Dg0000660 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.5Dg0000665 R-ASA-1125540-2 AVESA.00001b.r3.5Dg0000665 [cytosol] R-ASA-1119303 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119303 Pyridoxamine anabolism none Avena sativa AVESA.00001b.r3.5Dg0000665 R-ASA-1125540-2 AVESA.00001b.r3.5Dg0000665 [cytosol] R-ASA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119534 Pyridoxal 5'-phosphate salvage pathway none Avena sativa AVESA.00001b.r3.5Dg0000674 R-ASA-9658563-4 AVESA.00001b.r3.5Dg0000674 [endoplasmic reticulum lumen] R-ASA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119502 Allantoin degradation none Avena sativa AVESA.00001b.r3.5Dg0000746 R-ASA-8879027 AVESA.00001b.r3.5Dg0000746 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.5Dg0000827 R-ASA-9611544 SPL11 [nucleoplasm] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.5Dg0000827 R-ASA-9611440 phospho-phosphorylated-SPL11 [nucleoplasm] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.5Dg0000888 R-ASA-9640745-3 AVESA.00001b.r3.5Dg0000888 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.5Dg0000888 R-ASA-9640745-3 AVESA.00001b.r3.5Dg0000888 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.5Dg0000888 R-ASA-9640745-3 AVESA.00001b.r3.5Dg0000888 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.5Dg0000901 R-ASA-1123894 AVESA.00001b.r3.5Dg0000901 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0000927 R-ASA-1128815-4 AVESA.00001b.r3.5Dg0000927 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.5Dg0000927 R-ASA-1128815-4 AVESA.00001b.r3.5Dg0000927 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0000951 R-ASA-9607149 AVESA.00001b.r3.5Dg0000951 [plasma membrane] R-ASA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9607185 Generation of superoxide radicals none Avena sativa AVESA.00001b.r3.5Dg0000951 R-ASA-9607094 phospho-AVESA.00001b.r3.5Dg0000951 [plasma membrane] R-ASA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9607185 Generation of superoxide radicals none Avena sativa AVESA.00001b.r3.5Dg0000988 R-ASA-9920304-2 AVESA.00001b.r3.5Dg0000988 [nucleoplasm] R-ASA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934108 Short day regulated expression of florigens none Avena sativa AVESA.00001b.r3.5Dg0001006 R-ASA-1129924-2 AVESA.00001b.r3.5Dg0001006 [cytosol] R-ASA-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119342 Gamma-glutamyl cycle none Avena sativa AVESA.00001b.r3.5Dg0001006 R-ASA-1129924-2 AVESA.00001b.r3.5Dg0001006 [cytosol] R-ASA-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119483 Glutathione biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0001060 R-ASA-9916125-2 AVESA.00001b.r3.5Dg0001060 [nucleoplasm] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.5Dg0001060 R-ASA-9916231-2 AVESA.00001b.r3.5Dg0001060 [cytosol] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.5Dg0001060 R-ASA-9916199-2 phospho-AVESA.00001b.r3.5Dg0001060 [cytosol] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.5Dg0001062 R-ASA-1130036-2 AVESA.00001b.r3.5Dg0001062 [endoplasmic reticulum membrane] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.5Dg0001084 R-ASA-1127151-2 AVESA.00001b.r3.5Dg0001084 [cytosol] R-ASA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119384 NAD biosynthesis I (from aspartate) none Avena sativa AVESA.00001b.r3.5Dg0001163 R-ASA-9682527 AVESA.00001b.r3.5Dg0001163 [cytosol] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0001180 R-ASA-9611889-4 AVESA.00001b.r3.5Dg0001180 [mitochondrial matrix] R-ASA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119479 Valine degradation none Avena sativa AVESA.00001b.r3.5Dg0001186 R-ASA-9916305-4 AVESA.00001b.r3.5Dg0001186 [nucleoplasm] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.5Dg0001225 R-ASA-1122351 AVESA.00001b.r3.5Dg0001225 [cytosol] R-ASA-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119354 Asparagine biosynthesis III none Avena sativa AVESA.00001b.r3.5Dg0001225 R-ASA-5633281 AVESA.00001b.r3.5Dg0001225 [cytosol] R-ASA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119495 Citrulline biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0001225 R-ASA-1122351 AVESA.00001b.r3.5Dg0001225 [cytosol] R-ASA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119553 Asparagine biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0001257 R-ASA-9675877-2 AVESA.00001b.r3.5Dg0001257 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.5Dg0001281 R-ASA-1125550-2 AVESA.00001b.r3.5Dg0001281 [cytosol] R-ASA-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119623 Acyl-CoA synthetase pathway none Avena sativa AVESA.00001b.r3.5Dg0001321 R-ASA-9640722-3 AVESA.00001b.r3.5Dg0001321 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.5Dg0001365 R-ASA-5655070-2 AVESA.00001b.r3.5Dg0001365 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0001395 R-ASA-1129809-3 AVESA.00001b.r3.5Dg0001395 [mitochondrial inner membrane] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0001400 R-ASA-1127173-2 AVESA.00001b.r3.5Dg0001400 [cytosol] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0001409 R-ASA-1123943 AVESA.00001b.r3.5Dg0001409 [plastid] R-ASA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119365 Lysine degradation II none Avena sativa AVESA.00001b.r3.5Dg0001431 R-ASA-9025819 AVESA.00001b.r3.5Dg0001431 [plasma membrane] R-ASA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025727 Iron uptake and transport in root vascular system none Avena sativa AVESA.00001b.r3.5Dg0001436 R-ASA-1125839-5 AVESA.00001b.r3.5Dg0001436 [cytosol] R-ASA-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119386 UDP-N-acetylgalactosamine biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0001462 R-ASA-1126387 AVESA.00001b.r3.5Dg0001462 [cytosol] R-ASA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119295 Homoserine biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0001464 R-ASA-9645907-5 AVESA.00001b.r3.5Dg0001464 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.5Dg0001464 R-ASA-9645907-5 AVESA.00001b.r3.5Dg0001464 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.5Dg0001468 R-ASA-9826671-2 NAC77 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.5Dg0001469 R-ASA-9636827-2 AVESA.00001b.r3.5Dg0001469 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.5Dg0001545 R-ASA-1125804-3 AVESA.00001b.r3.5Dg0001545 [cytosol] R-ASA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119300 Glycolipid desaturation none Avena sativa AVESA.00001b.r3.5Dg0001547 R-ASA-5654797 AVESA.00001b.r3.5Dg0001547 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.5Dg0001562 R-ASA-5633270-3 AVESA.00001b.r3.5Dg0001562 [cytosol] R-ASA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119495 Citrulline biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0001599 R-ASA-9640671-2 AVESA.00001b.r3.5Dg0001599 [nucleoplasm] R-ASA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640760 G1 phase none Avena sativa AVESA.00001b.r3.5Dg0001599 R-ASA-9640671-2 AVESA.00001b.r3.5Dg0001599 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.5Dg0001636 R-ASA-9927723-3 AVESA.00001b.r3.5Dg0001636 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.5Dg0001670 R-ASA-1126998-5 AVESA.00001b.r3.5Dg0001670 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.5Dg0001671 R-ASA-1123161-6 AVESA.00001b.r3.5Dg0001671 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0001672 R-ASA-1123161-5 AVESA.00001b.r3.5Dg0001672 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0001673 R-ASA-1124959-2 AVESA.00001b.r3.5Dg0001673 [cytosol] R-ASA-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119623 Acyl-CoA synthetase pathway none Avena sativa AVESA.00001b.r3.5Dg0001681 R-ASA-1127491-3 AVESA.00001b.r3.5Dg0001681 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.5Dg0001714 R-ASA-5632251 AVESA.00001b.r3.5Dg0001714 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.5Dg0001726 R-ASA-1123557 AVESA.00001b.r3.5Dg0001726 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.5Dg0001726 R-ASA-1123557 AVESA.00001b.r3.5Dg0001726 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.5Dg0001726 R-ASA-1123557 AVESA.00001b.r3.5Dg0001726 [cytosol] R-ASA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119295 Homoserine biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0001726 R-ASA-5606479 AVESA.00001b.r3.5Dg0001726 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.5Dg0001733 R-ASA-1127443-2 AVESA.00001b.r3.5Dg0001733 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0001768 R-ASA-1122936-3 AVESA.00001b.r3.5Dg0001768 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.5Dg0001795 R-ASA-9826647-4 AVESA.00001b.r3.5Dg0001795 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.5Dg0001796 R-ASA-9826647-2 AVESA.00001b.r3.5Dg0001796 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.5Dg0001800 R-ASA-5083827-2 AVESA.00001b.r3.5Dg0001800 [mitochondrial matrix] R-ASA-1119319 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119319 Alanine biosynthesis III none Avena sativa AVESA.00001b.r3.5Dg0001800 R-ASA-5083827-2 AVESA.00001b.r3.5Dg0001800 [mitochondrial matrix] R-ASA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119612 Cysteine degradation none Avena sativa AVESA.00001b.r3.5Dg0001813 R-ASA-9639003-3 AVESA.00001b.r3.5Dg0001813 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.5Dg0001833 R-ASA-6787276-3 AVESA.00001b.r3.5Dg0001833 [plastid stroma] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0001833 R-ASA-6787950-3 AVESA.00001b.r3.5Dg0001833 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Dg0001866 R-ASA-1125587 AVESA.00001b.r3.5Dg0001866 [cytosol] R-ASA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119379 Flavin biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0001867 R-ASA-9645938-2 AVESA.00001b.r3.5Dg0001867 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.5Dg0001867 R-ASA-9645938-2 AVESA.00001b.r3.5Dg0001867 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.5Dg0001880 R-ASA-1124905-3 AVESA.00001b.r3.5Dg0001880 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.5Dg0001913 R-ASA-9640729-2 AVESA.00001b.r3.5Dg0001913 [nucleoplasm] R-ASA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640760 G1 phase none Avena sativa AVESA.00001b.r3.5Dg0001913 R-ASA-9640729-2 AVESA.00001b.r3.5Dg0001913 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.5Dg0001930 R-ASA-1128160 AVESA.00001b.r3.5Dg0001930 [cytosol] R-ASA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119516 Trehalose biosynthesis I none Avena sativa AVESA.00001b.r3.5Dg0001940 R-ASA-6786969-3 AVESA.00001b.r3.5Dg0001940 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Dg0001940 R-ASA-6787121-3 AVESA.00001b.r3.5Dg0001940 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Dg0001940 R-ASA-6786969-3 AVESA.00001b.r3.5Dg0001940 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Dg0001945 R-ASA-1127738-2 AVESA.00001b.r3.5Dg0001945 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.5Dg0001945 R-ASA-1127738-2 AVESA.00001b.r3.5Dg0001945 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.5Dg0001945 R-ASA-5606514-2 AVESA.00001b.r3.5Dg0001945 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.5Dg0001946 R-ASA-2730728 AVESA.00001b.r3.5Dg0001946 [cytosol] R-ASA-1119413 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119413 Trans-zeatin biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0001996 R-ASA-6787876 AVESA.00001b.r3.5Dg0001996 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Dg0001997 R-ASA-6787876-6 AVESA.00001b.r3.5Dg0001997 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Dg0002003 R-ASA-1125953 AVESA.00001b.r3.5Dg0002003 [cytosol] R-ASA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119316 Phenylpropanoid biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0002023 R-ASA-1124334 AVESA.00001b.r3.5Dg0002023 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0002069 R-ASA-9607102-3 AVESA.00001b.r3.5Dg0002069 [mitochondrion] R-ASA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9607185 Generation of superoxide radicals none Avena sativa AVESA.00001b.r3.5Dg0002079 R-ASA-5679378 AVESA.00001b.r3.5Dg0002079 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.5Dg0002079 R-ASA-5679378 AVESA.00001b.r3.5Dg0002079 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Dg0002079 R-ASA-6787094 AVESA.00001b.r3.5Dg0002079 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Dg0002079 R-ASA-5679378 AVESA.00001b.r3.5Dg0002079 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Dg0002086 R-ASA-1124813-3 AVESA.00001b.r3.5Dg0002086 [mitochondrial matrix] R-ASA-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119337 Proline degradation none Avena sativa AVESA.00001b.r3.5Dg0002086 R-ASA-8986570-3 AVESA.00001b.r3.5Dg0002086 [mitochondrial matrix] R-ASA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119365 Lysine degradation II none Avena sativa AVESA.00001b.r3.5Dg0002086 R-ASA-9658682-3 AVESA.00001b.r3.5Dg0002086 [cytosol] R-ASA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119567 Beta-alanine biosynthesis I none Avena sativa AVESA.00001b.r3.5Dg0002119 R-ASA-1126542-3 AVESA.00001b.r3.5Dg0002119 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.5Dg0002119 R-ASA-1126542-3 AVESA.00001b.r3.5Dg0002119 [cytosol] R-ASA-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119617 Folate polyglutamylation I none Avena sativa AVESA.00001b.r3.5Dg0002127 R-ASA-1122827 AVESA.00001b.r3.5Dg0002127 [cytosol] R-ASA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119334 Ethylene biosynthesis from methionine none Avena sativa AVESA.00001b.r3.5Dg0002133 R-ASA-1123097-3 AVESA.00001b.r3.5Dg0002133 [cytosol] R-ASA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119341 Galactosylcyclitol biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0002155 R-ASA-1126380 AVESA.00001b.r3.5Dg0002155 [cytosol] R-ASA-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119609 Phaseic acid biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0002186 R-ASA-1128980-2 AVESA.00001b.r3.5Dg0002186 [cytosol] R-ASA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119586 Cyanate degradation none Avena sativa AVESA.00001b.r3.5Dg0002192 R-ASA-2960195 AVESA.00001b.r3.5Dg0002192 [cytosol] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0002192 R-ASA-2960195 AVESA.00001b.r3.5Dg0002192 [cytosol] R-ASA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119570 Cytosolic glycolysis none Avena sativa AVESA.00001b.r3.5Dg0002198 R-ASA-9640777-3 AVESA.00001b.r3.5Dg0002198 [nucleoplasm] R-ASA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640760 G1 phase none Avena sativa AVESA.00001b.r3.5Dg0002198 R-ASA-9640777-3 AVESA.00001b.r3.5Dg0002198 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.5Dg0002213 R-ASA-9918264-3 ISA3 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0002229 R-ASA-1129078-2 AVESA.00001b.r3.5Dg0002229 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0002260 R-ASA-9607132-3 RBOHB [plasma membrane] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.5Dg0002260 R-ASA-9611529-3 phospho-phosphorylated-RBOHB [plasma membrane] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.5Dg0002295 R-ASA-2960790 AVESA.00001b.r3.5Dg0002295 [cytosol] R-ASA-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119386 UDP-N-acetylgalactosamine biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0002295 R-ASA-2960790 AVESA.00001b.r3.5Dg0002295 [cytosol] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.5Dg0002301 R-ASA-6786917 AVESA.00001b.r3.5Dg0002301 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Dg0002304 R-ASA-9608743 AVESA.00001b.r3.5Dg0002304 [cytosol] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.5Dg0002304 R-ASA-9608705 AVESA.00001b.r3.5Dg0002304 [nucleoplasm] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.5Dg0002310 R-ASA-8868866-5 AVESA.00001b.r3.5Dg0002310 [endoplasmic reticulum membrane] R-ASA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8868949 Intracellular auxin transport none Avena sativa AVESA.00001b.r3.5Dg0002311 R-ASA-8868866-4 AVESA.00001b.r3.5Dg0002311 [endoplasmic reticulum membrane] R-ASA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8868949 Intracellular auxin transport none Avena sativa AVESA.00001b.r3.5Dg0002321 R-ASA-1125142 AVESA.00001b.r3.5Dg0002321 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.5Dg0002379 R-ASA-1129921-2 AVESA.00001b.r3.5Dg0002379 [cytosol] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0002379 R-ASA-1129921-2 AVESA.00001b.r3.5Dg0002379 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.5Dg0002386 R-ASA-8858081-3 AVESA.00001b.r3.5Dg0002386 [plasma membrane] R-ASA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8858053 Polar auxin transport none Avena sativa AVESA.00001b.r3.5Dg0002388 R-ASA-1124138-3 AVESA.00001b.r3.5Dg0002388 [cytosol] R-ASA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119394 Pantothenate and coenzyme A biosynthesis III none Avena sativa AVESA.00001b.r3.5Dg0002451 R-ASA-1129136 AVESA.00001b.r3.5Dg0002451 [plastid stroma] R-ASA-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Avena sativa AVESA.00001b.r3.5Dg0002479 R-ASA-9639010-3 AVESA.00001b.r3.5Dg0002479 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.5Dg0002496 R-ASA-8879050 CBF1 homolog [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.5Dg0002499 R-ASA-9766868-8 DREB1A [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.5Dg0002500 R-ASA-9766868-3 DREB1A [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.5Dg0002501 R-ASA-9766868-6 DREB1A [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.5Dg0002502 R-ASA-9766868-9 DREB1A [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.5Dg0002503 R-ASA-9766868-2 DREB1A [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.5Dg0002535 R-ASA-1128678-2 AVESA.00001b.r3.5Dg0002535 [cytosol] R-ASA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119292 Cytokinins 7-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0002535 R-ASA-1128678-2 AVESA.00001b.r3.5Dg0002535 [cytosol] R-ASA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119375 Cytokinins 9-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0002535 R-ASA-1128678-2 AVESA.00001b.r3.5Dg0002535 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0002546 R-ASA-8933784-3 AVESA.00001b.r3.5Dg0002546 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.5Dg0002550 R-ASA-1127502-2 AVESA.00001b.r3.5Dg0002550 [cytosol] R-ASA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119394 Pantothenate and coenzyme A biosynthesis III none Avena sativa AVESA.00001b.r3.5Dg0002563 R-ASA-1128877-2 AVESA.00001b.r3.5Dg0002563 [plastid stroma] R-ASA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119424 Plastid glycolysis none Avena sativa AVESA.00001b.r3.5Dg0002563 R-ASA-1128877-2 AVESA.00001b.r3.5Dg0002563 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.5Dg0002588 R-ASA-1126440 AVESA.00001b.r3.5Dg0002588 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0002589 R-ASA-9645954-3 AVESA.00001b.r3.5Dg0002589 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.5Dg0002619 R-ASA-1129187 AVESA.00001b.r3.5Dg0002619 [cytosol] R-ASA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119276 Choline biosynthesis III none Avena sativa AVESA.00001b.r3.5Dg0002677 R-ASA-1124095 AVESA.00001b.r3.5Dg0002677 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.5Dg0002678 R-ASA-1124095-3 AVESA.00001b.r3.5Dg0002678 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.5Dg0002681 R-ASA-1123525-2 AVESA.00001b.r3.5Dg0002681 [cytosol] R-ASA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119384 NAD biosynthesis I (from aspartate) none Avena sativa AVESA.00001b.r3.5Dg0002688 R-ASA-8868994-2 AVESA.00001b.r3.5Dg0002688 [endoplasmic reticulum membrane] R-ASA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8868949 Intracellular auxin transport none Avena sativa AVESA.00001b.r3.5Dg0002698 R-ASA-5679404-3 AVESA.00001b.r3.5Dg0002698 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.5Dg0002784 R-ASA-1129481-3 AVESA.00001b.r3.5Dg0002784 [cytosol] R-ASA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119389 Phenylalanine biosynthesis I none Avena sativa AVESA.00001b.r3.5Dg0002832 R-ASA-1129311 AVESA.00001b.r3.5Dg0002832 [cytosol] R-ASA-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0002833 R-ASA-1129311-2 AVESA.00001b.r3.5Dg0002833 [cytosol] R-ASA-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0002862 R-ASA-1124206-2 AVESA.00001b.r3.5Dg0002862 [cytosol] R-ASA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119403 Removal of superoxide radicals none Avena sativa AVESA.00001b.r3.5Dg0002862 R-ASA-1124206-2 AVESA.00001b.r3.5Dg0002862 [cytosol] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.5Dg0002883 R-ASA-1123477-3 AVESA.00001b.r3.5Dg0002883 [cytosol] R-ASA-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119451 Xylose degradation none Avena sativa AVESA.00001b.r3.5Dg0002911 R-ASA-1129818-2 AVESA.00001b.r3.5Dg0002911 [mitochondrial matrix] R-ASA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119365 Lysine degradation II none Avena sativa AVESA.00001b.r3.5Dg0002911 R-ASA-1173242-2 AVESA.00001b.r3.5Dg0002911 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.5Dg0002916 R-ASA-8933718 AVESA.00001b.r3.5Dg0002916 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.5Dg0002916 R-ASA-8933718 AVESA.00001b.r3.5Dg0002916 [nucleoplasm] R-ASA-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928946 Drought escape (DE) via ABA-independent pathway none Avena sativa AVESA.00001b.r3.5Dg0002918 R-ASA-1126883 AVESA.00001b.r3.5Dg0002918 [cytosol] R-ASA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119389 Phenylalanine biosynthesis I none Avena sativa AVESA.00001b.r3.5Dg0002933 R-ASA-1129616 AVESA.00001b.r3.5Dg0002933 [cytosol] R-ASA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119300 Glycolipid desaturation none Avena sativa AVESA.00001b.r3.5Dg0002954 R-ASA-1125275 AVESA.00001b.r3.5Dg0002954 [cytosol] R-ASA-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119629 Thiamine biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0002964 R-ASA-1124234-2 AVESA.00001b.r3.5Dg0002964 [cytosol] R-ASA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119436 Peptidoglycan biosynthesis I none Avena sativa AVESA.00001b.r3.5Dg0002983 R-ASA-9025758-2 AVESA.00001b.r3.5Dg0002983 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0002995 R-ASA-6788050-2 AVESA.00001b.r3.5Dg0002995 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.5Dg0003006 R-ASA-6787018 AVESA.00001b.r3.5Dg0003006 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.5Dg0003028 R-ASA-1123087-2 AVESA.00001b.r3.5Dg0003028 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0003067 R-ASA-9826657 AVESA.00001b.r3.5Dg0003067 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.5Dg0003088 R-ASA-1127509-2 AVESA.00001b.r3.5Dg0003088 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.5Dg0003115 R-ASA-9618112 AVESA.00001b.r3.5Dg0003115 [plasma membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.5Dg0003118 R-ASA-1125631 AVESA.00001b.r3.5Dg0003118 [cytosol] R-ASA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119321 Glycerol degradation I none Avena sativa AVESA.00001b.r3.5Dg0003120 R-ASA-8987531-11 AVESA.00001b.r3.5Dg0003120 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.5Dg0003120 R-ASA-1125951-11 AVESA.00001b.r3.5Dg0003120 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.5Dg0003121 R-ASA-8987531-16 AVESA.00001b.r3.5Dg0003121 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.5Dg0003121 R-ASA-1125951-16 AVESA.00001b.r3.5Dg0003121 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.5Dg0003122 R-ASA-8987531-20 AVESA.00001b.r3.5Dg0003122 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.5Dg0003122 R-ASA-1125951-20 AVESA.00001b.r3.5Dg0003122 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.5Dg0003123 R-ASA-8987531-21 AVESA.00001b.r3.5Dg0003123 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.5Dg0003123 R-ASA-1125951-21 AVESA.00001b.r3.5Dg0003123 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.5Dg0003125 R-ASA-8987531-26 AVESA.00001b.r3.5Dg0003125 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.5Dg0003125 R-ASA-1125951-26 AVESA.00001b.r3.5Dg0003125 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.5Dg0003126 R-ASA-8987531-23 AVESA.00001b.r3.5Dg0003126 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.5Dg0003126 R-ASA-1125951-23 AVESA.00001b.r3.5Dg0003126 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.5Dg0003140 R-ASA-8987531-15 AVESA.00001b.r3.5Dg0003140 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.5Dg0003140 R-ASA-1125951-15 AVESA.00001b.r3.5Dg0003140 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.5Dg0003141 R-ASA-8987531-8 AVESA.00001b.r3.5Dg0003141 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.5Dg0003141 R-ASA-1125951-8 AVESA.00001b.r3.5Dg0003141 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.5Dg0003142 R-ASA-8987531-25 AVESA.00001b.r3.5Dg0003142 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.5Dg0003142 R-ASA-1125951-25 AVESA.00001b.r3.5Dg0003142 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.5Dg0003145 R-ASA-1122373-2 AVESA.00001b.r3.5Dg0003145 [cytosol] R-ASA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119304 Putrescine biosynthesis II none Avena sativa AVESA.00001b.r3.5Dg0003145 R-ASA-1122373-2 AVESA.00001b.r3.5Dg0003145 [cytosol] R-ASA-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119447 Putrescine biosynthesis I none Avena sativa AVESA.00001b.r3.5Dg0003146 R-ASA-1122373-11 AVESA.00001b.r3.5Dg0003146 [cytosol] R-ASA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119304 Putrescine biosynthesis II none Avena sativa AVESA.00001b.r3.5Dg0003146 R-ASA-1122373-11 AVESA.00001b.r3.5Dg0003146 [cytosol] R-ASA-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119447 Putrescine biosynthesis I none Avena sativa AVESA.00001b.r3.5Dg0003147 R-ASA-1122373-4 AVESA.00001b.r3.5Dg0003147 [cytosol] R-ASA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119304 Putrescine biosynthesis II none Avena sativa AVESA.00001b.r3.5Dg0003147 R-ASA-1122373-4 AVESA.00001b.r3.5Dg0003147 [cytosol] R-ASA-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119447 Putrescine biosynthesis I none Avena sativa AVESA.00001b.r3.5Dg0003148 R-ASA-1122373-7 AVESA.00001b.r3.5Dg0003148 [cytosol] R-ASA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119304 Putrescine biosynthesis II none Avena sativa AVESA.00001b.r3.5Dg0003148 R-ASA-1122373-7 AVESA.00001b.r3.5Dg0003148 [cytosol] R-ASA-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119447 Putrescine biosynthesis I none Avena sativa AVESA.00001b.r3.5Dg0003149 R-ASA-1122373 AVESA.00001b.r3.5Dg0003149 [cytosol] R-ASA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119304 Putrescine biosynthesis II none Avena sativa AVESA.00001b.r3.5Dg0003149 R-ASA-1122373 AVESA.00001b.r3.5Dg0003149 [cytosol] R-ASA-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119447 Putrescine biosynthesis I none Avena sativa AVESA.00001b.r3.5Dg0003150 R-ASA-1122373-8 AVESA.00001b.r3.5Dg0003150 [cytosol] R-ASA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119304 Putrescine biosynthesis II none Avena sativa AVESA.00001b.r3.5Dg0003150 R-ASA-1122373-8 AVESA.00001b.r3.5Dg0003150 [cytosol] R-ASA-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119447 Putrescine biosynthesis I none Avena sativa AVESA.00001b.r3.5Dg0003151 R-ASA-1122373-3 AVESA.00001b.r3.5Dg0003151 [cytosol] R-ASA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119304 Putrescine biosynthesis II none Avena sativa AVESA.00001b.r3.5Dg0003151 R-ASA-1122373-3 AVESA.00001b.r3.5Dg0003151 [cytosol] R-ASA-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119447 Putrescine biosynthesis I none Avena sativa AVESA.00001b.r3.5Dg0003203 R-ASA-9609569-4 AVESA.00001b.r3.5Dg0003203 [cytosol] R-ASA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609573 Tricin biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0003219 R-ASA-1128606-2 AVESA.00001b.r3.5Dg0003219 [mitochondrial matrix] R-ASA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119365 Lysine degradation II none Avena sativa AVESA.00001b.r3.5Dg0003219 R-ASA-1173244-2 AVESA.00001b.r3.5Dg0003219 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.5Dg0003220 R-ASA-5654942 AVESA.00001b.r3.5Dg0003220 [Golgi lumen] R-ASA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654909 Xylan biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0003234 R-ASA-1126998-2 AVESA.00001b.r3.5Dg0003234 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.5Dg0003235 R-ASA-5631969-2 AVESA.00001b.r3.5Dg0003235 [mitochondrial matrix] R-ASA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119289 Arginine degradation none Avena sativa AVESA.00001b.r3.5Dg0003235 R-ASA-5633275-2 AVESA.00001b.r3.5Dg0003235 [cytosol] R-ASA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119495 Citrulline biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0003245 R-ASA-1126344-2 AVESA.00001b.r3.5Dg0003245 [plastid stroma] R-ASA-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119529 Sulfate activation for sulfonation none Avena sativa AVESA.00001b.r3.5Dg0003261 R-ASA-9640718 AVESA.00001b.r3.5Dg0003261 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.5Dg0003292 R-ASA-1127324-2 AVESA.00001b.r3.5Dg0003292 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.5Dg0003315 R-ASA-5608169-2 AVESA.00001b.r3.5Dg0003315 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.5Dg0003396 R-ASA-1125556 AVESA.00001b.r3.5Dg0003396 [cytosol] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.5Dg0003396 R-ASA-1125556 AVESA.00001b.r3.5Dg0003396 [cytosol] R-ASA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119628 GDP-mannose metabolism none Avena sativa AVESA.00001b.r3.5Dg0003475 R-ASA-9640782 AVESA.00001b.r3.5Dg0003475 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.6Ag0000069 R-ASA-1127597 AVESA.00001b.r3.6Ag0000069 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.6Ag0000071 R-ASA-1128626-2 AVESA.00001b.r3.6Ag0000071 [cytosol] R-ASA-1119581 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119581 Thiosulfate disproportionation III (rhodanese) none Avena sativa AVESA.00001b.r3.6Ag0000085 R-ASA-1128974-5 AVESA.00001b.r3.6Ag0000085 [cytosol] R-ASA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119287 Vitamin E biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0000085 R-ASA-1128974-5 AVESA.00001b.r3.6Ag0000085 [cytosol] R-ASA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119506 tyrosine degradation I none Avena sativa AVESA.00001b.r3.6Ag0000090 R-ASA-4827041-2 AVESA.00001b.r3.6Ag0000090 [plastid stroma] R-ASA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-4827054 Tetrapyrrole biosynthesis I none Avena sativa AVESA.00001b.r3.6Ag0000095 R-ASA-5149657-2 AVESA.00001b.r3.6Ag0000095 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.6Ag0000095 R-ASA-1129239-2 AVESA.00001b.r3.6Ag0000095 [cytosol] R-ASA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119570 Cytosolic glycolysis none Avena sativa AVESA.00001b.r3.6Ag0000100 R-ASA-8987483 AVESA.00001b.r3.6Ag0000100 [mitochondrial matrix] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.6Ag0000104 R-ASA-1125241-2 AVESA.00001b.r3.6Ag0000104 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.6Ag0000104 R-ASA-1125241-2 AVESA.00001b.r3.6Ag0000104 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.6Ag0000110 R-ASA-1125187 AVESA.00001b.r3.6Ag0000110 [cytosol] R-ASA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119276 Choline biosynthesis III none Avena sativa AVESA.00001b.r3.6Ag0000114 R-ASA-1129846 AVESA.00001b.r3.6Ag0000114 [mitochondrion] R-ASA-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119337 Proline degradation none Avena sativa AVESA.00001b.r3.6Ag0000114 R-ASA-1129846 AVESA.00001b.r3.6Ag0000114 [mitochondrion] R-ASA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119458 Glutamate degradation none Avena sativa AVESA.00001b.r3.6Ag0000153 R-ASA-1122463-4 AVESA.00001b.r3.6Ag0000153 [cytosol] R-ASA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119321 Glycerol degradation I none Avena sativa AVESA.00001b.r3.6Ag0000155 R-ASA-1122463-5 AVESA.00001b.r3.6Ag0000155 [cytosol] R-ASA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119321 Glycerol degradation I none Avena sativa AVESA.00001b.r3.6Ag0000178 R-ASA-1130344-2 AVESA.00001b.r3.6Ag0000178 [cytosol] R-ASA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119389 Phenylalanine biosynthesis I none Avena sativa AVESA.00001b.r3.6Ag0000181 R-ASA-6787130 AVESA.00001b.r3.6Ag0000181 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.6Ag0000181 R-ASA-6787130 AVESA.00001b.r3.6Ag0000181 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.6Ag0000206 R-ASA-1125090-2 AVESA.00001b.r3.6Ag0000206 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0000226 R-ASA-1125967-3 AVESA.00001b.r3.6Ag0000226 [cytosol] R-ASA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119316 Phenylpropanoid biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0000243 R-ASA-1122832 AVESA.00001b.r3.6Ag0000243 [plastid stroma] R-ASA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119449 Carotenoid biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0000245 R-ASA-1129769-2 AVESA.00001b.r3.6Ag0000245 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0000245 R-ASA-1129769-2 AVESA.00001b.r3.6Ag0000245 [cytosol] R-ASA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119618 13-LOX and 13-HPL pathway none Avena sativa AVESA.00001b.r3.6Ag0000266 R-ASA-1129055-3 AVESA.00001b.r3.6Ag0000266 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.6Ag0000268 R-ASA-1129769 AVESA.00001b.r3.6Ag0000268 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0000268 R-ASA-1129769 AVESA.00001b.r3.6Ag0000268 [cytosol] R-ASA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119618 13-LOX and 13-HPL pathway none Avena sativa AVESA.00001b.r3.6Ag0000269 R-ASA-1129769-10 AVESA.00001b.r3.6Ag0000269 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0000269 R-ASA-1129769-10 AVESA.00001b.r3.6Ag0000269 [cytosol] R-ASA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119618 13-LOX and 13-HPL pathway none Avena sativa AVESA.00001b.r3.6Ag0000328 R-ASA-9918179 AVESA.00001b.r3.6Ag0000328 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0000347 R-ASA-1129078-5 AVESA.00001b.r3.6Ag0000347 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0000379 R-ASA-6787113 AVESA.00001b.r3.6Ag0000379 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.6Ag0000417 R-ASA-5632264-3 AVESA.00001b.r3.6Ag0000417 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.6Ag0000458 R-ASA-1127442-3 AVESA.00001b.r3.6Ag0000458 [cytosol] R-ASA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119281 Aspartate biosynthesis I none Avena sativa AVESA.00001b.r3.6Ag0000458 R-ASA-5632001-3 AVESA.00001b.r3.6Ag0000458 [plastid stroma] R-ASA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119553 Asparagine biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0000478 R-ASA-4415060-3 AVESA.00001b.r3.6Ag0000478 [plasma membrane] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.6Ag0000478 R-ASA-4415065-3 phospho-AVESA.00001b.r3.6Ag0000478 [plasma membrane] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.6Ag0000520 R-ASA-5654827-6 AVESA.00001b.r3.6Ag0000520 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.6Ag0000549 R-ASA-5633387 AVESA.00001b.r3.6Ag0000549 [mitochondrial matrix] R-ASA-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119445 Beta-alanine biosynthesis II none Avena sativa AVESA.00001b.r3.6Ag0000563 R-ASA-9639957-2 AVESA.00001b.r3.6Ag0000563 [plasma membrane] R-ASA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639861 Development of root hair none Avena sativa AVESA.00001b.r3.6Ag0000624 R-ASA-1124067-2 AVESA.00001b.r3.6Ag0000624 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0000624 R-ASA-9626520-2 AVESA.00001b.r3.6Ag0000624 [plastid stroma] R-ASA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9626305 Regulatory network of nutrient accumulation none Avena sativa AVESA.00001b.r3.6Ag0000661 R-ASA-1129851-2 AVESA.00001b.r3.6Ag0000661 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.6Ag0000661 R-ASA-1129851-2 AVESA.00001b.r3.6Ag0000661 [mitochondrial matrix] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0000694 R-ASA-9928961 AVESA.00001b.r3.6Ag0000694 [nucleoplasm] R-ASA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928995 Drought escape (DE) via ABA-dependent pathway none Avena sativa AVESA.00001b.r3.6Ag0000711 R-ASA-9826606-2 AVESA.00001b.r3.6Ag0000711 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.6Ag0000713 R-ASA-5655076-2 AVESA.00001b.r3.6Ag0000713 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0000726 R-ASA-9630306 AVESA.00001b.r3.6Ag0000726 [nucleoplasm] R-ASA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640760 G1 phase none Avena sativa AVESA.00001b.r3.6Ag0000750 R-ASA-5679294-2 AVESA.00001b.r3.6Ag0000750 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.6Ag0000764 R-ASA-1124797 AVESA.00001b.r3.6Ag0000764 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0000814 R-ASA-1127429-3 AVESA.00001b.r3.6Ag0000814 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0000834 R-ASA-9025498 AVESA.00001b.r3.6Ag0000834 [endoplasmic reticulum membrane] R-ASA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119325 Sphingolipid metabolism none Avena sativa AVESA.00001b.r3.6Ag0000836 R-ASA-9618131-3 AVESA.00001b.r3.6Ag0000836 [plasma membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.6Ag0000839 R-ASA-1122261 AVESA.00001b.r3.6Ag0000839 [plastid stroma] R-ASA-1119602 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119602 Phytyl-PP biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0000839 R-ASA-1122261 AVESA.00001b.r3.6Ag0000839 [plastid stroma] R-ASA-1119605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119605 Chlorophyll a biosynthesis II none Avena sativa AVESA.00001b.r3.6Ag0000840 R-ASA-9918275-2 soluble Starch Synthase (SSII-2/SSIIb) [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0000845 R-ASA-1122656 AVESA.00001b.r3.6Ag0000845 [endosome] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.6Ag0000845 R-ASA-5679312 AVESA.00001b.r3.6Ag0000845 [plasma membrane] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.6Ag0000896 R-ASA-9658702-2 AVESA.00001b.r3.6Ag0000896 [plastid stroma] R-ASA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119297 Beta-alanine biosynthesis III none Avena sativa AVESA.00001b.r3.6Ag0000970 R-ASA-5632087-2 AVESA.00001b.r3.6Ag0000970 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.6Ag0001010 R-ASA-1127574 AVESA.00001b.r3.6Ag0001010 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001018 R-ASA-2960780 AVESA.00001b.r3.6Ag0001018 [cytosol] R-ASA-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119386 UDP-N-acetylgalactosamine biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001025 R-ASA-1123913-3 AVESA.00001b.r3.6Ag0001025 [cytosol] R-ASA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119300 Glycolipid desaturation none Avena sativa AVESA.00001b.r3.6Ag0001032 R-ASA-1123092-2 AVESA.00001b.r3.6Ag0001032 [cytosol] R-ASA-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119278 PRPP biosynthesis I none Avena sativa AVESA.00001b.r3.6Ag0001040 R-ASA-1125802 AVESA.00001b.r3.6Ag0001040 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.6Ag0001041 R-ASA-9826666 AVESA.00001b.r3.6Ag0001041 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.6Ag0001043 R-ASA-9638997-3 AVESA.00001b.r3.6Ag0001043 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.6Ag0001047 R-ASA-9916108-2 AVESA.00001b.r3.6Ag0001047 [extracellular region] R-ASA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119403 Removal of superoxide radicals none Avena sativa AVESA.00001b.r3.6Ag0001047 R-ASA-9916108-2 AVESA.00001b.r3.6Ag0001047 [extracellular region] R-ASA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9607185 Generation of superoxide radicals none Avena sativa AVESA.00001b.r3.6Ag0001065 R-ASA-1125447 AVESA.00001b.r3.6Ag0001065 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.6Ag0001084 R-ASA-9916252-3 OsEGT1 [nucleoplasm] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.6Ag0001088 R-ASA-5138486 AVESA.00001b.r3.6Ag0001088 [plastid stroma] R-ASA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119263 Arginine biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001088 R-ASA-1123709 AVESA.00001b.r3.6Ag0001088 [cytosol] R-ASA-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119318 Proline biosynthesis V (from arginine) none Avena sativa AVESA.00001b.r3.6Ag0001088 R-ASA-1123709 AVESA.00001b.r3.6Ag0001088 [cytosol] R-ASA-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119444 Canavanine biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001095 R-ASA-9924558-3 NCED1 [plastid] R-ASA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Avena sativa AVESA.00001b.r3.6Ag0001098 R-ASA-1128857 AVESA.00001b.r3.6Ag0001098 [cytosol] R-ASA-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119609 Phaseic acid biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001105 R-ASA-9025500 AVESA.00001b.r3.6Ag0001105 [endoplasmic reticulum membrane] R-ASA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119325 Sphingolipid metabolism none Avena sativa AVESA.00001b.r3.6Ag0001123 R-ASA-5149678-2 AVESA.00001b.r3.6Ag0001123 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.6Ag0001128 R-ASA-1129650-3 AVESA.00001b.r3.6Ag0001128 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001151 R-ASA-5138481 AVESA.00001b.r3.6Ag0001151 [plastid stroma] R-ASA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119263 Arginine biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001151 R-ASA-5138481 AVESA.00001b.r3.6Ag0001151 [plastid stroma] R-ASA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119539 Ornithine biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001184 R-ASA-1129922 AVESA.00001b.r3.6Ag0001184 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.6Ag0001248 R-ASA-1125474-3 AVESA.00001b.r3.6Ag0001248 [cytosol] R-ASA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119437 Glutathione redox reactions I none Avena sativa AVESA.00001b.r3.6Ag0001271 R-ASA-9025447-2 AVESA.00001b.r3.6Ag0001271 [cytosol] R-ASA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119325 Sphingolipid metabolism none Avena sativa AVESA.00001b.r3.6Ag0001277 R-ASA-1124032-2 AVESA.00001b.r3.6Ag0001277 [cytosol] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001286 R-ASA-1126053 AVESA.00001b.r3.6Ag0001286 [mitochondrial matrix] R-ASA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119479 Valine degradation none Avena sativa AVESA.00001b.r3.6Ag0001304 R-ASA-9025699-2 AVESA.00001b.r3.6Ag0001304 [plasma membrane] R-ASA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8858053 Polar auxin transport none Avena sativa AVESA.00001b.r3.6Ag0001305 R-ASA-9025772-3 AVESA.00001b.r3.6Ag0001305 [plasma membrane] R-ASA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025727 Iron uptake and transport in root vascular system none Avena sativa AVESA.00001b.r3.6Ag0001346 R-ASA-1125730-2 AVESA.00001b.r3.6Ag0001346 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.6Ag0001347 R-ASA-1127161-3 AVESA.00001b.r3.6Ag0001347 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.6Ag0001378 R-ASA-1129245-8 AVESA.00001b.r3.6Ag0001378 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001378 R-ASA-1129245-8 AVESA.00001b.r3.6Ag0001378 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001378 R-ASA-1129245-8 AVESA.00001b.r3.6Ag0001378 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.6Ag0001379 R-ASA-1129245-7 AVESA.00001b.r3.6Ag0001379 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001379 R-ASA-1129245-7 AVESA.00001b.r3.6Ag0001379 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001379 R-ASA-1129245-7 AVESA.00001b.r3.6Ag0001379 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.6Ag0001380 R-ASA-1124767 AVESA.00001b.r3.6Ag0001380 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001380 R-ASA-1124767 AVESA.00001b.r3.6Ag0001380 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001380 R-ASA-1124767 AVESA.00001b.r3.6Ag0001380 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.6Ag0001381 R-ASA-1125701 AVESA.00001b.r3.6Ag0001381 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001381 R-ASA-1125701 AVESA.00001b.r3.6Ag0001381 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001381 R-ASA-1125701 AVESA.00001b.r3.6Ag0001381 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.6Ag0001388 R-ASA-8933738-2 AVESA.00001b.r3.6Ag0001388 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.6Ag0001391 R-ASA-8879002-10 AVESA.00001b.r3.6Ag0001391 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.6Ag0001392 R-ASA-8879002-11 AVESA.00001b.r3.6Ag0001392 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.6Ag0001393 R-ASA-8879002-7 AVESA.00001b.r3.6Ag0001393 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.6Ag0001394 R-ASA-8879002-9 AVESA.00001b.r3.6Ag0001394 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.6Ag0001395 R-ASA-8879002-8 AVESA.00001b.r3.6Ag0001395 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.6Ag0001407 R-ASA-1129896-2 AVESA.00001b.r3.6Ag0001407 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.6Ag0001452 R-ASA-1128431 AVESA.00001b.r3.6Ag0001452 [cytosol] R-ASA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119316 Phenylpropanoid biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001455 R-ASA-1128077 AVESA.00001b.r3.6Ag0001455 [cytosol] R-ASA-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119317 Spermine biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001455 R-ASA-1128077 AVESA.00001b.r3.6Ag0001455 [cytosol] R-ASA-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119343 Spermidine biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001482 R-ASA-1124778 AVESA.00001b.r3.6Ag0001482 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.6Ag0001494 R-ASA-1130348 AVESA.00001b.r3.6Ag0001494 [cytosol] R-ASA-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001496 R-ASA-1126647 AVESA.00001b.r3.6Ag0001496 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.6Ag0001496 R-ASA-1126647 AVESA.00001b.r3.6Ag0001496 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.6Ag0001517 R-ASA-1126662-2 AVESA.00001b.r3.6Ag0001517 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.6Ag0001517 R-ASA-1126662-2 AVESA.00001b.r3.6Ag0001517 [mitochondrial matrix] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001576 R-ASA-9826687-3 AVESA.00001b.r3.6Ag0001576 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.6Ag0001576 R-ASA-9826687-3 AVESA.00001b.r3.6Ag0001576 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.6Ag0001578 R-ASA-1122564 AVESA.00001b.r3.6Ag0001578 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001596 R-ASA-8933710-2 AVESA.00001b.r3.6Ag0001596 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.6Ag0001600 R-ASA-1128950-2 AVESA.00001b.r3.6Ag0001600 [cytosol] R-ASA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119379 Flavin biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001609 R-ASA-1128319 AVESA.00001b.r3.6Ag0001609 [cytosol] R-ASA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119341 Galactosylcyclitol biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001631 R-ASA-1123255-3 AVESA.00001b.r3.6Ag0001631 [cytosol] R-ASA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119506 tyrosine degradation I none Avena sativa AVESA.00001b.r3.6Ag0001635 R-ASA-9675352-2 AVESA.00001b.r3.6Ag0001635 [plasma membrane] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.6Ag0001636 R-ASA-9675352 AVESA.00001b.r3.6Ag0001636 [plasma membrane] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.6Ag0001652 R-ASA-1125309 AVESA.00001b.r3.6Ag0001652 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.6Ag0001682 R-ASA-9675481-3 AVESA.00001b.r3.6Ag0001682 [cytosol] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.6Ag0001687 R-ASA-1129068-3 AVESA.00001b.r3.6Ag0001687 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.6Ag0001687 R-ASA-1129068-3 AVESA.00001b.r3.6Ag0001687 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001711 R-ASA-9640739-2 AVESA.00001b.r3.6Ag0001711 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.6Ag0001719 R-ASA-1127065-3 AVESA.00001b.r3.6Ag0001719 [cytosol] R-ASA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119304 Putrescine biosynthesis II none Avena sativa AVESA.00001b.r3.6Ag0001751 R-ASA-1130304-3 AVESA.00001b.r3.6Ag0001751 [cytosol] R-ASA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119291 Nitrate assimilation none Avena sativa AVESA.00001b.r3.6Ag0001752 R-ASA-8933714 AVESA.00001b.r3.6Ag0001752 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.6Ag0001779 R-ASA-9675818-2 AVESA.00001b.r3.6Ag0001779 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.6Ag0001800 R-ASA-1123610-3 AVESA.00001b.r3.6Ag0001800 [cytosol] R-ASA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119389 Phenylalanine biosynthesis I none Avena sativa AVESA.00001b.r3.6Ag0001800 R-ASA-1123610-3 AVESA.00001b.r3.6Ag0001800 [cytosol] R-ASA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119506 tyrosine degradation I none Avena sativa AVESA.00001b.r3.6Ag0001839 R-ASA-1129571-3 AVESA.00001b.r3.6Ag0001839 [mitochondrion] R-ASA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119365 Lysine degradation II none Avena sativa AVESA.00001b.r3.6Ag0001853 R-ASA-9639088 AVESA.00001b.r3.6Ag0001853 [plasma membrane] R-ASA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639136 Response to Aluminum stress none Avena sativa AVESA.00001b.r3.6Ag0001880 R-ASA-1123210 AVESA.00001b.r3.6Ag0001880 [cytosol] R-ASA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119516 Trehalose biosynthesis I none Avena sativa AVESA.00001b.r3.6Ag0001885 R-ASA-1129203-2 AVESA.00001b.r3.6Ag0001885 [cytosol] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0001885 R-ASA-1129203-2 AVESA.00001b.r3.6Ag0001885 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.6Ag0001929 R-ASA-9640704 AVESA.00001b.r3.6Ag0001929 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.6Ag0001929 R-ASA-9640704 AVESA.00001b.r3.6Ag0001929 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.6Ag0001929 R-ASA-9640704 AVESA.00001b.r3.6Ag0001929 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.6Ag0001930 R-ASA-1123797 AVESA.00001b.r3.6Ag0001930 [cytosol] R-ASA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119281 Aspartate biosynthesis I none Avena sativa AVESA.00001b.r3.6Ag0001992 R-ASA-9640689-4 AVESA.00001b.r3.6Ag0001992 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.6Ag0001992 R-ASA-9640689-4 AVESA.00001b.r3.6Ag0001992 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.6Ag0001992 R-ASA-9640689-4 AVESA.00001b.r3.6Ag0001992 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.6Ag0002008 R-ASA-1123336-2 AVESA.00001b.r3.6Ag0002008 [cytosol] R-ASA-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119342 Gamma-glutamyl cycle none Avena sativa AVESA.00001b.r3.6Ag0002008 R-ASA-1123336-2 AVESA.00001b.r3.6Ag0002008 [cytosol] R-ASA-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119483 Glutathione biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0002030 R-ASA-1129113-2 AVESA.00001b.r3.6Ag0002030 [cytosol] R-ASA-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119298 Glutathione redox reactions II none Avena sativa AVESA.00001b.r3.6Ag0002030 R-ASA-1129113-2 AVESA.00001b.r3.6Ag0002030 [cytosol] R-ASA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119437 Glutathione redox reactions I none Avena sativa AVESA.00001b.r3.6Ag0002060 R-ASA-1128385-3 AVESA.00001b.r3.6Ag0002060 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.6Ag0002075 R-ASA-9639018 AVESA.00001b.r3.6Ag0002075 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.6Ag0002092 R-ASA-1128974-2 AVESA.00001b.r3.6Ag0002092 [cytosol] R-ASA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119287 Vitamin E biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0002092 R-ASA-1128974-2 AVESA.00001b.r3.6Ag0002092 [cytosol] R-ASA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119506 tyrosine degradation I none Avena sativa AVESA.00001b.r3.6Ag0002120 R-ASA-1126131-3 AVESA.00001b.r3.6Ag0002120 [cytosol] R-ASA-1119528 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119528 Beta-alanine betaine biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0002231 R-ASA-9025789-2 AVESA.00001b.r3.6Ag0002231 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0002254 R-ASA-1127076-6 AVESA.00001b.r3.6Ag0002254 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0002254 R-ASA-1127076-6 AVESA.00001b.r3.6Ag0002254 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.6Ag0002295 R-ASA-9658656 AVESA.00001b.r3.6Ag0002295 [cytosol] R-ASA-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119271 Threonine degradation none Avena sativa AVESA.00001b.r3.6Ag0002295 R-ASA-9658656 AVESA.00001b.r3.6Ag0002295 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.6Ag0002295 R-ASA-9658656 AVESA.00001b.r3.6Ag0002295 [cytosol] R-ASA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119567 Beta-alanine biosynthesis I none Avena sativa AVESA.00001b.r3.6Ag0002316 R-ASA-1125237-2 AVESA.00001b.r3.6Ag0002316 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.6Ag0002320 R-ASA-5632334-2 AVESA.00001b.r3.6Ag0002320 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.6Ag0002320 R-ASA-5632197-2 phospho-AVESA.00001b.r3.6Ag0002320 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.6Ag0002320 R-ASA-5632183-2 phospho-AVESA.00001b.r3.6Ag0002320 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.6Ag0002320 R-ASA-5632334-2 AVESA.00001b.r3.6Ag0002320 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.6Ag0002375 R-ASA-1123819-2 AVESA.00001b.r3.6Ag0002375 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.6Ag0002387 R-ASA-5655107-2 AVESA.00001b.r3.6Ag0002387 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0002419 R-ASA-6787141 AVESA.00001b.r3.6Ag0002419 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.6Ag0002435 R-ASA-9681895-3 AVESA.00001b.r3.6Ag0002435 [Golgi membrane] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.6Ag0002464 R-ASA-1123534-4 AVESA.00001b.r3.6Ag0002464 [cytosol] R-ASA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119438 Secologanin and strictosidine biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0002471 R-ASA-1122373-5 AVESA.00001b.r3.6Ag0002471 [cytosol] R-ASA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119304 Putrescine biosynthesis II none Avena sativa AVESA.00001b.r3.6Ag0002471 R-ASA-1122373-5 AVESA.00001b.r3.6Ag0002471 [cytosol] R-ASA-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119447 Putrescine biosynthesis I none Avena sativa AVESA.00001b.r3.6Ag0002474 R-ASA-5679443 AVESA.00001b.r3.6Ag0002474 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.6Ag0002474 R-ASA-5679443 AVESA.00001b.r3.6Ag0002474 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.6Ag0002474 R-ASA-6787090 AVESA.00001b.r3.6Ag0002474 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.6Ag0002482 R-ASA-1130222 AVESA.00001b.r3.6Ag0002482 [cytosol] R-ASA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119596 Glutamate biosynthesis I none Avena sativa AVESA.00001b.r3.6Ag0002484 R-ASA-1129561 AVESA.00001b.r3.6Ag0002484 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.6Ag0002484 R-ASA-1129561 AVESA.00001b.r3.6Ag0002484 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0002497 R-ASA-1129585-2 AVESA.00001b.r3.6Ag0002497 [cytosol] R-ASA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119265 Tetrahydrofolate biosynthesis I none Avena sativa AVESA.00001b.r3.6Ag0002497 R-ASA-1129585-2 AVESA.00001b.r3.6Ag0002497 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.6Ag0002529 R-ASA-1122845-2 AVESA.00001b.r3.6Ag0002529 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0002566 R-ASA-9640752-2 AVESA.00001b.r3.6Ag0002566 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.6Ag0002566 R-ASA-9640752-2 AVESA.00001b.r3.6Ag0002566 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.6Ag0002636 R-ASA-1130302-2 AVESA.00001b.r3.6Ag0002636 [cytosol] R-ASA-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119451 Xylose degradation none Avena sativa AVESA.00001b.r3.6Ag0002642 R-ASA-2685731 AVESA.00001b.r3.6Ag0002642 [cytosol] R-ASA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119580 IAA biosynthesis II none Avena sativa AVESA.00001b.r3.6Ag0002721 R-ASA-9611465-3 AVESA.00001b.r3.6Ag0002721 [nucleoplasm] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.6Ag0002721 R-ASA-9611445-3 AVESA.00001b.r3.6Ag0002721 [nucleoplasm] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.6Ag0002729 R-ASA-5603891-2 AVESA.00001b.r3.6Ag0002729 [plastid stroma] R-ASA-1119420 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119420 Glutamate biosynthesis V none Avena sativa AVESA.00001b.r3.6Ag0002729 R-ASA-1125410-2 AVESA.00001b.r3.6Ag0002729 [chloroplast stroma] R-ASA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119443 Ammonia assimilation cycle none Avena sativa AVESA.00001b.r3.6Ag0002748 R-ASA-1129311-4 AVESA.00001b.r3.6Ag0002748 [cytosol] R-ASA-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0002776 R-ASA-1124206 AVESA.00001b.r3.6Ag0002776 [cytosol] R-ASA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119403 Removal of superoxide radicals none Avena sativa AVESA.00001b.r3.6Ag0002776 R-ASA-1124206 AVESA.00001b.r3.6Ag0002776 [cytosol] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.6Ag0002794 R-ASA-1123477 AVESA.00001b.r3.6Ag0002794 [cytosol] R-ASA-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119451 Xylose degradation none Avena sativa AVESA.00001b.r3.6Ag0002820 R-ASA-1129818-3 AVESA.00001b.r3.6Ag0002820 [mitochondrial matrix] R-ASA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119365 Lysine degradation II none Avena sativa AVESA.00001b.r3.6Ag0002820 R-ASA-1173242-3 AVESA.00001b.r3.6Ag0002820 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.6Ag0002829 R-ASA-1126883-3 AVESA.00001b.r3.6Ag0002829 [cytosol] R-ASA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119389 Phenylalanine biosynthesis I none Avena sativa AVESA.00001b.r3.6Ag0002840 R-ASA-1129616-3 AVESA.00001b.r3.6Ag0002840 [cytosol] R-ASA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119300 Glycolipid desaturation none Avena sativa AVESA.00001b.r3.6Ag0002861 R-ASA-1125275-3 AVESA.00001b.r3.6Ag0002861 [cytosol] R-ASA-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119629 Thiamine biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0002869 R-ASA-1124234-3 AVESA.00001b.r3.6Ag0002869 [cytosol] R-ASA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119436 Peptidoglycan biosynthesis I none Avena sativa AVESA.00001b.r3.6Ag0002886 R-ASA-9025758-3 AVESA.00001b.r3.6Ag0002886 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0002896 R-ASA-6788050 AVESA.00001b.r3.6Ag0002896 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.6Ag0002900 R-ASA-9927865-2 AVESA.00001b.r3.6Ag0002900 [nucleoplasm] R-ASA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934257 Transition from vegetative to reproductive shoot apical meristem none Avena sativa AVESA.00001b.r3.6Ag0002904 R-ASA-6787254 AVESA.00001b.r3.6Ag0002904 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.6Ag0002904 R-ASA-6787112 AVESA.00001b.r3.6Ag0002904 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.6Ag0002909 R-ASA-6787018-3 AVESA.00001b.r3.6Ag0002909 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.6Ag0002931 R-ASA-1123087-3 AVESA.00001b.r3.6Ag0002931 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0002988 R-ASA-1127509 AVESA.00001b.r3.6Ag0002988 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.6Ag0003020 R-ASA-9618112-3 AVESA.00001b.r3.6Ag0003020 [plasma membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.6Ag0003042 R-ASA-8987531-9 AVESA.00001b.r3.6Ag0003042 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.6Ag0003042 R-ASA-1125951-9 AVESA.00001b.r3.6Ag0003042 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.6Ag0003043 R-ASA-8987531-14 AVESA.00001b.r3.6Ag0003043 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.6Ag0003043 R-ASA-1125951-14 AVESA.00001b.r3.6Ag0003043 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.6Ag0003044 R-ASA-8987531-22 AVESA.00001b.r3.6Ag0003044 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.6Ag0003044 R-ASA-1125951-22 AVESA.00001b.r3.6Ag0003044 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.6Ag0003045 R-ASA-8987531-7 AVESA.00001b.r3.6Ag0003045 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.6Ag0003045 R-ASA-1125951-7 AVESA.00001b.r3.6Ag0003045 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.6Ag0003046 R-ASA-8987531-19 AVESA.00001b.r3.6Ag0003046 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.6Ag0003046 R-ASA-1125951-19 AVESA.00001b.r3.6Ag0003046 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.6Ag0003047 R-ASA-8987531-2 AVESA.00001b.r3.6Ag0003047 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.6Ag0003047 R-ASA-1125951-2 AVESA.00001b.r3.6Ag0003047 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.6Ag0003049 R-ASA-1122373-9 AVESA.00001b.r3.6Ag0003049 [cytosol] R-ASA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119304 Putrescine biosynthesis II none Avena sativa AVESA.00001b.r3.6Ag0003049 R-ASA-1122373-9 AVESA.00001b.r3.6Ag0003049 [cytosol] R-ASA-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119447 Putrescine biosynthesis I none Avena sativa AVESA.00001b.r3.6Ag0003051 R-ASA-1122373-10 AVESA.00001b.r3.6Ag0003051 [cytosol] R-ASA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119304 Putrescine biosynthesis II none Avena sativa AVESA.00001b.r3.6Ag0003051 R-ASA-1122373-10 AVESA.00001b.r3.6Ag0003051 [cytosol] R-ASA-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119447 Putrescine biosynthesis I none Avena sativa AVESA.00001b.r3.6Ag0003109 R-ASA-9609569-3 AVESA.00001b.r3.6Ag0003109 [cytosol] R-ASA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609573 Tricin biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0003133 R-ASA-1128606 AVESA.00001b.r3.6Ag0003133 [mitochondrial matrix] R-ASA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119365 Lysine degradation II none Avena sativa AVESA.00001b.r3.6Ag0003133 R-ASA-1173244 AVESA.00001b.r3.6Ag0003133 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.6Ag0003136 R-ASA-5654942-2 AVESA.00001b.r3.6Ag0003136 [Golgi lumen] R-ASA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654909 Xylan biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0003151 R-ASA-1126998-6 AVESA.00001b.r3.6Ag0003151 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.6Ag0003152 R-ASA-5631969-3 AVESA.00001b.r3.6Ag0003152 [mitochondrial matrix] R-ASA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119289 Arginine degradation none Avena sativa AVESA.00001b.r3.6Ag0003152 R-ASA-5633275-3 AVESA.00001b.r3.6Ag0003152 [cytosol] R-ASA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119495 Citrulline biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0003165 R-ASA-1126344-3 AVESA.00001b.r3.6Ag0003165 [plastid stroma] R-ASA-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119529 Sulfate activation for sulfonation none Avena sativa AVESA.00001b.r3.6Ag0003183 R-ASA-9640718-2 AVESA.00001b.r3.6Ag0003183 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.6Ag0003197 R-ASA-1127752 AVESA.00001b.r3.6Ag0003197 [cytosol] R-ASA-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119417 Stachyose biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0003217 R-ASA-1127324 AVESA.00001b.r3.6Ag0003217 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.6Ag0003242 R-ASA-5608169 AVESA.00001b.r3.6Ag0003242 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.6Ag0003291 R-ASA-1128906 AVESA.00001b.r3.6Ag0003291 [cytosol] R-ASA-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119444 Canavanine biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0003340 R-ASA-1125556-2 AVESA.00001b.r3.6Ag0003340 [cytosol] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.6Ag0003340 R-ASA-1125556-2 AVESA.00001b.r3.6Ag0003340 [cytosol] R-ASA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119628 GDP-mannose metabolism none Avena sativa AVESA.00001b.r3.6Ag0003343 R-ASA-1125670 AVESA.00001b.r3.6Ag0003343 [cytosol] R-ASA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119393 Asparagine degradation I none Avena sativa AVESA.00001b.r3.6Cg0000020 R-ASA-1124861 AVESA.00001b.r3.6Cg0000020 [plastid stroma] R-ASA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119449 Carotenoid biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0000044 R-ASA-9918274 SBE1 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0000044 R-ASA-9626342 AVESA.00001b.r3.6Cg0000044 [plastid stroma] R-ASA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9626305 Regulatory network of nutrient accumulation none Avena sativa AVESA.00001b.r3.6Cg0000179 R-ASA-1125014-2 AVESA.00001b.r3.6Cg0000179 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.6Cg0000187 R-ASA-1130078-2 AVESA.00001b.r3.6Cg0000187 [cytosol] R-ASA-1119440 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119440 Anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside) none Avena sativa AVESA.00001b.r3.6Cg0000187 R-ASA-2672102-2 AVESA.00001b.r3.6Cg0000187 [cytosol] R-ASA-1119514 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119514 Anthocyanin biosynthesis (delphinidin 3-O-glucoside) none Avena sativa AVESA.00001b.r3.6Cg0000195 R-ASA-1123454-2 AVESA.00001b.r3.6Cg0000195 [chloroplast inner membrane] R-ASA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119287 Vitamin E biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0000200 R-ASA-8858085-2 AVESA.00001b.r3.6Cg0000200 [plasma membrane] R-ASA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8858053 Polar auxin transport none Avena sativa AVESA.00001b.r3.6Cg0000200 R-ASA-8858085-2 AVESA.00001b.r3.6Cg0000200 [plasma membrane] R-ASA-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924494 Gravity sensing and statolith sedimentation none Avena sativa AVESA.00001b.r3.6Cg0000200 R-ASA-9928298-2 PIN2 [endosome] R-ASA-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924494 Gravity sensing and statolith sedimentation none Avena sativa AVESA.00001b.r3.6Cg0000230 R-ASA-3230566 AVESA.00001b.r3.6Cg0000230 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.6Cg0000240 R-ASA-9658573 AVESA.00001b.r3.6Cg0000240 [endoplasmic reticulum lumen] R-ASA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119502 Allantoin degradation none Avena sativa AVESA.00001b.r3.6Cg0000247 R-ASA-1125920-3 AVESA.00001b.r3.6Cg0000247 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.6Cg0000247 R-ASA-1125920-3 AVESA.00001b.r3.6Cg0000247 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.6Cg0000307 R-ASA-5608154 AVESA.00001b.r3.6Cg0000307 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.6Cg0000362 R-ASA-5608129 AVESA.00001b.r3.6Cg0000362 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.6Cg0000391 R-ASA-9645838-2 AVESA.00001b.r3.6Cg0000391 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.6Cg0000391 R-ASA-9645838-2 AVESA.00001b.r3.6Cg0000391 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.6Cg0000391 R-ASA-9645838-2 AVESA.00001b.r3.6Cg0000391 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.6Cg0000401 R-ASA-2685721 AVESA.00001b.r3.6Cg0000401 [cytosol] R-ASA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119580 IAA biosynthesis II none Avena sativa AVESA.00001b.r3.6Cg0000404 R-ASA-8933763 AVESA.00001b.r3.6Cg0000404 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.6Cg0000425 R-ASA-9639211-2 AVESA.00001b.r3.6Cg0000425 [plant-type vacuole membrane] R-ASA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639136 Response to Aluminum stress none Avena sativa AVESA.00001b.r3.6Cg0000451 R-ASA-1129880-2 AVESA.00001b.r3.6Cg0000451 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0000463 R-ASA-3240749-2 AVESA.00001b.r3.6Cg0000463 [cytosol] R-ASA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Avena sativa AVESA.00001b.r3.6Cg0000463 R-ASA-9681918-2 AVESA.00001b.r3.6Cg0000463 [cytosol] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.6Cg0000472 R-ASA-9681920 AVESA.00001b.r3.6Cg0000472 [cytosol] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.6Cg0000482 R-ASA-5632143-2 AVESA.00001b.r3.6Cg0000482 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.6Cg0000482 R-ASA-5632143-2 AVESA.00001b.r3.6Cg0000482 [nucleoplasm] R-ASA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924451 Shoot (tiller) formation and regulation of tiller angle none Avena sativa AVESA.00001b.r3.6Cg0000484 R-ASA-4827046-3 AVESA.00001b.r3.6Cg0000484 [plastid stroma] R-ASA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-4827054 Tetrapyrrole biosynthesis I none Avena sativa AVESA.00001b.r3.6Cg0000503 R-ASA-1128178 AVESA.00001b.r3.6Cg0000503 [cytosol] R-ASA-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119322 Leucodelphinidin biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0000503 R-ASA-1128178 AVESA.00001b.r3.6Cg0000503 [cytosol] R-ASA-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0000503 R-ASA-9609575 AVESA.00001b.r3.6Cg0000503 [endoplasmic reticulum membrane] R-ASA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609573 Tricin biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0000572 R-ASA-1126400-3 AVESA.00001b.r3.6Cg0000572 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0000593 R-ASA-8933710 AVESA.00001b.r3.6Cg0000593 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.6Cg0000595 R-ASA-1130049 AVESA.00001b.r3.6Cg0000595 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0000597 R-ASA-1128950 AVESA.00001b.r3.6Cg0000597 [cytosol] R-ASA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119379 Flavin biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0000608 R-ASA-1128319-2 AVESA.00001b.r3.6Cg0000608 [cytosol] R-ASA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119341 Galactosylcyclitol biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0000621 R-ASA-1123255-2 AVESA.00001b.r3.6Cg0000621 [cytosol] R-ASA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119506 tyrosine degradation I none Avena sativa AVESA.00001b.r3.6Cg0000627 R-ASA-9675352-3 AVESA.00001b.r3.6Cg0000627 [plasma membrane] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.6Cg0000636 R-ASA-1125309-3 AVESA.00001b.r3.6Cg0000636 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.6Cg0000669 R-ASA-9675481-2 AVESA.00001b.r3.6Cg0000669 [cytosol] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.6Cg0000673 R-ASA-1129068 AVESA.00001b.r3.6Cg0000673 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.6Cg0000673 R-ASA-1129068 AVESA.00001b.r3.6Cg0000673 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0000689 R-ASA-9025712-6 AVESA.00001b.r3.6Cg0000689 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0000697 R-ASA-9640739 AVESA.00001b.r3.6Cg0000697 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.6Cg0000708 R-ASA-1127065-2 AVESA.00001b.r3.6Cg0000708 [cytosol] R-ASA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119304 Putrescine biosynthesis II none Avena sativa AVESA.00001b.r3.6Cg0000709 R-ASA-1125374 AVESA.00001b.r3.6Cg0000709 [cytosol] R-ASA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119586 Cyanate degradation none Avena sativa AVESA.00001b.r3.6Cg0000754 R-ASA-8933714-3 AVESA.00001b.r3.6Cg0000754 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.6Cg0000755 R-ASA-1130304-2 AVESA.00001b.r3.6Cg0000755 [cytosol] R-ASA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119291 Nitrate assimilation none Avena sativa AVESA.00001b.r3.6Cg0000787 R-ASA-9675818-3 AVESA.00001b.r3.6Cg0000787 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.6Cg0000810 R-ASA-1123610 AVESA.00001b.r3.6Cg0000810 [cytosol] R-ASA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119389 Phenylalanine biosynthesis I none Avena sativa AVESA.00001b.r3.6Cg0000810 R-ASA-1123610 AVESA.00001b.r3.6Cg0000810 [cytosol] R-ASA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119506 tyrosine degradation I none Avena sativa AVESA.00001b.r3.6Cg0000837 R-ASA-1129571 AVESA.00001b.r3.6Cg0000837 [mitochondrion] R-ASA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119365 Lysine degradation II none Avena sativa AVESA.00001b.r3.6Cg0000851 R-ASA-9639088-2 AVESA.00001b.r3.6Cg0000851 [plasma membrane] R-ASA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639136 Response to Aluminum stress none Avena sativa AVESA.00001b.r3.6Cg0000874 R-ASA-1123210-2 AVESA.00001b.r3.6Cg0000874 [cytosol] R-ASA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119516 Trehalose biosynthesis I none Avena sativa AVESA.00001b.r3.6Cg0000881 R-ASA-1129203 AVESA.00001b.r3.6Cg0000881 [cytosol] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0000881 R-ASA-1129203 AVESA.00001b.r3.6Cg0000881 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.6Cg0000929 R-ASA-9640704-3 AVESA.00001b.r3.6Cg0000929 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.6Cg0000929 R-ASA-9640704-3 AVESA.00001b.r3.6Cg0000929 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.6Cg0000929 R-ASA-9640704-3 AVESA.00001b.r3.6Cg0000929 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.6Cg0000930 R-ASA-1123797-2 AVESA.00001b.r3.6Cg0000930 [cytosol] R-ASA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119281 Aspartate biosynthesis I none Avena sativa AVESA.00001b.r3.6Cg0000980 R-ASA-9640689-2 AVESA.00001b.r3.6Cg0000980 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.6Cg0000980 R-ASA-9640689-2 AVESA.00001b.r3.6Cg0000980 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.6Cg0000980 R-ASA-9640689-2 AVESA.00001b.r3.6Cg0000980 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.6Cg0000998 R-ASA-1123336-3 AVESA.00001b.r3.6Cg0000998 [cytosol] R-ASA-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119342 Gamma-glutamyl cycle none Avena sativa AVESA.00001b.r3.6Cg0000998 R-ASA-1123336-3 AVESA.00001b.r3.6Cg0000998 [cytosol] R-ASA-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119483 Glutathione biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0001027 R-ASA-1129113 AVESA.00001b.r3.6Cg0001027 [cytosol] R-ASA-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119298 Glutathione redox reactions II none Avena sativa AVESA.00001b.r3.6Cg0001027 R-ASA-1129113 AVESA.00001b.r3.6Cg0001027 [cytosol] R-ASA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119437 Glutathione redox reactions I none Avena sativa AVESA.00001b.r3.6Cg0001067 R-ASA-1128385-2 AVESA.00001b.r3.6Cg0001067 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.6Cg0001083 R-ASA-9639018-2 AVESA.00001b.r3.6Cg0001083 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.6Cg0001132 R-ASA-1126131-2 AVESA.00001b.r3.6Cg0001132 [cytosol] R-ASA-1119528 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119528 Beta-alanine betaine biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0001199 R-ASA-9645872 AVESA.00001b.r3.6Cg0001199 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.6Cg0001227 R-ASA-5633332 AVESA.00001b.r3.6Cg0001227 [plastid stroma] R-ASA-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5633340 Citrulline-nitric oxide cycle none Avena sativa AVESA.00001b.r3.6Cg0001245 R-ASA-1126888-4 AVESA.00001b.r3.6Cg0001245 [cytosol] R-ASA-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119360 Fructan biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0001246 R-ASA-1126888-2 AVESA.00001b.r3.6Cg0001246 [cytosol] R-ASA-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119360 Fructan biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0001251 R-ASA-1129029-5 AVESA.00001b.r3.6Cg0001251 [cytosol] R-ASA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119501 S-adenosyl-L-methionine cycle none Avena sativa AVESA.00001b.r3.6Cg0001255 R-ASA-1129029-3 AVESA.00001b.r3.6Cg0001255 [cytosol] R-ASA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119501 S-adenosyl-L-methionine cycle none Avena sativa AVESA.00001b.r3.6Cg0001272 R-ASA-1126373 AVESA.00001b.r3.6Cg0001272 [cytosol] R-ASA-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0001298 R-ASA-1128322-3 AVESA.00001b.r3.6Cg0001298 [cytosol] R-ASA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119384 NAD biosynthesis I (from aspartate) none Avena sativa AVESA.00001b.r3.6Cg0001399 R-ASA-8854445 AVESA.00001b.r3.6Cg0001399 [cytosol] R-ASA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119276 Choline biosynthesis III none Avena sativa AVESA.00001b.r3.6Cg0001407 R-ASA-3240748-2 AVESA.00001b.r3.6Cg0001407 [cytosol] R-ASA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Avena sativa AVESA.00001b.r3.6Cg0001420 R-ASA-9675293 AVESA.00001b.r3.6Cg0001420 [nucleoplasm] R-ASA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030557 Lateral root initiation none Avena sativa AVESA.00001b.r3.6Cg0001459 R-ASA-9640697-2 phospho-AVESA.00001b.r3.6Cg0001459 [nucleoplasm] R-ASA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640760 G1 phase none Avena sativa AVESA.00001b.r3.6Cg0001459 R-ASA-9640660-2 AVESA.00001b.r3.6Cg0001459 [nucleoplasm] R-ASA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640760 G1 phase none Avena sativa AVESA.00001b.r3.6Cg0001459 R-ASA-9640697-2 phospho-AVESA.00001b.r3.6Cg0001459 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.6Cg0001472 R-ASA-1124939 AVESA.00001b.r3.6Cg0001472 [cytosol] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0001492 R-ASA-1124520-2 AVESA.00001b.r3.6Cg0001492 [cytosol] R-ASA-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119278 PRPP biosynthesis I none Avena sativa AVESA.00001b.r3.6Cg0001531 R-ASA-9918273 AVESA.00001b.r3.6Cg0001531 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0001531 R-ASA-9626376 AVESA.00001b.r3.6Cg0001531 [plastid stroma] R-ASA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9626305 Regulatory network of nutrient accumulation none Avena sativa AVESA.00001b.r3.6Cg0001539 R-ASA-9645891-2 AVESA.00001b.r3.6Cg0001539 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.6Cg0001557 R-ASA-1122347-3 AVESA.00001b.r3.6Cg0001557 [cytosol] R-ASA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119384 NAD biosynthesis I (from aspartate) none Avena sativa AVESA.00001b.r3.6Cg0001596 R-ASA-1130231 AVESA.00001b.r3.6Cg0001596 [endoplasmic reticulum membrane] R-ASA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119325 Sphingolipid metabolism none Avena sativa AVESA.00001b.r3.6Cg0001630 R-ASA-1122881 AVESA.00001b.r3.6Cg0001630 [cytosol] R-ASA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0001630 R-ASA-1122881 AVESA.00001b.r3.6Cg0001630 [cytosol] R-ASA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119438 Secologanin and strictosidine biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0001630 R-ASA-1122881 AVESA.00001b.r3.6Cg0001630 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.6Cg0001636 R-ASA-1130281-3 AVESA.00001b.r3.6Cg0001636 [cytosol] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.6Cg0001667 R-ASA-6787224 AVESA.00001b.r3.6Cg0001667 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.6Cg0001667 R-ASA-6787146 AVESA.00001b.r3.6Cg0001667 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.6Cg0001695 R-ASA-9609608-5 AVESA.00001b.r3.6Cg0001695 [cytosol] R-ASA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609573 Tricin biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0001695 R-ASA-9916171-5 OsOMT [cytosol] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.6Cg0001695 R-ASA-9916312-5 OsOMT [nucleoplasm] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.6Cg0001701 R-ASA-9920292 AVESA.00001b.r3.6Cg0001701 [nucleoplasm] R-ASA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934108 Short day regulated expression of florigens none Avena sativa AVESA.00001b.r3.6Cg0001815 R-ASA-1128626-3 AVESA.00001b.r3.6Cg0001815 [cytosol] R-ASA-1119581 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119581 Thiosulfate disproportionation III (rhodanese) none Avena sativa AVESA.00001b.r3.6Cg0001833 R-ASA-4827041 AVESA.00001b.r3.6Cg0001833 [plastid stroma] R-ASA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-4827054 Tetrapyrrole biosynthesis I none Avena sativa AVESA.00001b.r3.6Cg0001841 R-ASA-5149657-3 AVESA.00001b.r3.6Cg0001841 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.6Cg0001841 R-ASA-1129239-3 AVESA.00001b.r3.6Cg0001841 [cytosol] R-ASA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119570 Cytosolic glycolysis none Avena sativa AVESA.00001b.r3.6Cg0001852 R-ASA-1125241 AVESA.00001b.r3.6Cg0001852 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.6Cg0001852 R-ASA-1125241 AVESA.00001b.r3.6Cg0001852 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.6Cg0001857 R-ASA-1125187-2 AVESA.00001b.r3.6Cg0001857 [cytosol] R-ASA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119276 Choline biosynthesis III none Avena sativa AVESA.00001b.r3.6Cg0001864 R-ASA-1129846-3 AVESA.00001b.r3.6Cg0001864 [mitochondrion] R-ASA-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119337 Proline degradation none Avena sativa AVESA.00001b.r3.6Cg0001864 R-ASA-1129846-3 AVESA.00001b.r3.6Cg0001864 [mitochondrion] R-ASA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119458 Glutamate degradation none Avena sativa AVESA.00001b.r3.6Cg0001905 R-ASA-1122463 AVESA.00001b.r3.6Cg0001905 [cytosol] R-ASA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119321 Glycerol degradation I none Avena sativa AVESA.00001b.r3.6Cg0001907 R-ASA-1122463-2 AVESA.00001b.r3.6Cg0001907 [cytosol] R-ASA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119321 Glycerol degradation I none Avena sativa AVESA.00001b.r3.6Cg0001927 R-ASA-1130344-3 AVESA.00001b.r3.6Cg0001927 [cytosol] R-ASA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119389 Phenylalanine biosynthesis I none Avena sativa AVESA.00001b.r3.6Cg0001929 R-ASA-6787130-2 AVESA.00001b.r3.6Cg0001929 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.6Cg0001929 R-ASA-6787130-2 AVESA.00001b.r3.6Cg0001929 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.6Cg0001958 R-ASA-1125090 AVESA.00001b.r3.6Cg0001958 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0001991 R-ASA-1125967 AVESA.00001b.r3.6Cg0001991 [cytosol] R-ASA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119316 Phenylpropanoid biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0002008 R-ASA-1122832-2 AVESA.00001b.r3.6Cg0002008 [plastid stroma] R-ASA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119449 Carotenoid biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0002037 R-ASA-1129055-2 AVESA.00001b.r3.6Cg0002037 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.6Cg0002040 R-ASA-1129769-6 AVESA.00001b.r3.6Cg0002040 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0002040 R-ASA-1129769-6 AVESA.00001b.r3.6Cg0002040 [cytosol] R-ASA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119618 13-LOX and 13-HPL pathway none Avena sativa AVESA.00001b.r3.6Cg0002042 R-ASA-1129769-7 AVESA.00001b.r3.6Cg0002042 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0002042 R-ASA-1129769-7 AVESA.00001b.r3.6Cg0002042 [cytosol] R-ASA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119618 13-LOX and 13-HPL pathway none Avena sativa AVESA.00001b.r3.6Cg0002043 R-ASA-1129769-9 AVESA.00001b.r3.6Cg0002043 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0002043 R-ASA-1129769-9 AVESA.00001b.r3.6Cg0002043 [cytosol] R-ASA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119618 13-LOX and 13-HPL pathway none Avena sativa AVESA.00001b.r3.6Cg0002098 R-ASA-9918179-2 AVESA.00001b.r3.6Cg0002098 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0002101 R-ASA-8933766 AVESA.00001b.r3.6Cg0002101 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.6Cg0002135 R-ASA-1129078-4 AVESA.00001b.r3.6Cg0002135 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0002155 R-ASA-6787113-3 AVESA.00001b.r3.6Cg0002155 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.6Cg0002191 R-ASA-5367743 AVESA.00001b.r3.6Cg0002191 [cytosol] R-ASA-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5367729 Strigolactone biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0002200 R-ASA-5632264-2 AVESA.00001b.r3.6Cg0002200 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.6Cg0002223 R-ASA-1130347-2 AVESA.00001b.r3.6Cg0002223 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.6Cg0002252 R-ASA-1127442 AVESA.00001b.r3.6Cg0002252 [cytosol] R-ASA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119281 Aspartate biosynthesis I none Avena sativa AVESA.00001b.r3.6Cg0002252 R-ASA-5632001 AVESA.00001b.r3.6Cg0002252 [plastid stroma] R-ASA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119553 Asparagine biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0002276 R-ASA-4415060-2 AVESA.00001b.r3.6Cg0002276 [plasma membrane] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.6Cg0002276 R-ASA-4415065-2 phospho-AVESA.00001b.r3.6Cg0002276 [plasma membrane] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.6Cg0002322 R-ASA-1125612-4 AVESA.00001b.r3.6Cg0002322 [cytosol] R-ASA-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119353 Linear furanocoumarin biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0002323 R-ASA-9645872-3 AVESA.00001b.r3.6Cg0002323 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.6Cg0002343 R-ASA-5654827-3 AVESA.00001b.r3.6Cg0002343 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.6Cg0002380 R-ASA-5633387-3 AVESA.00001b.r3.6Cg0002380 [mitochondrial matrix] R-ASA-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119445 Beta-alanine biosynthesis II none Avena sativa AVESA.00001b.r3.6Cg0002417 R-ASA-1124067 AVESA.00001b.r3.6Cg0002417 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0002417 R-ASA-9626520 AVESA.00001b.r3.6Cg0002417 [plastid stroma] R-ASA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9626305 Regulatory network of nutrient accumulation none Avena sativa AVESA.00001b.r3.6Cg0002436 R-ASA-9928961-2 AVESA.00001b.r3.6Cg0002436 [nucleoplasm] R-ASA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928995 Drought escape (DE) via ABA-dependent pathway none Avena sativa AVESA.00001b.r3.6Cg0002448 R-ASA-5655094-2 AVESA.00001b.r3.6Cg0002448 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0002463 R-ASA-9826606 AVESA.00001b.r3.6Cg0002463 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.6Cg0002537 R-ASA-1129851 AVESA.00001b.r3.6Cg0002537 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.6Cg0002537 R-ASA-1129851 AVESA.00001b.r3.6Cg0002537 [mitochondrial matrix] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0002603 R-ASA-9645938-3 AVESA.00001b.r3.6Cg0002603 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.6Cg0002603 R-ASA-9645938-3 AVESA.00001b.r3.6Cg0002603 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.6Cg0002622 R-ASA-9630306-2 AVESA.00001b.r3.6Cg0002622 [nucleoplasm] R-ASA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640760 G1 phase none Avena sativa AVESA.00001b.r3.6Cg0002696 R-ASA-1124797-3 AVESA.00001b.r3.6Cg0002696 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0002750 R-ASA-1127429 AVESA.00001b.r3.6Cg0002750 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0002760 R-ASA-9918275 soluble Starch Synthase (SSII-2/SSIIb) [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0002763 R-ASA-1122261-3 AVESA.00001b.r3.6Cg0002763 [plastid stroma] R-ASA-1119602 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119602 Phytyl-PP biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0002763 R-ASA-1122261-3 AVESA.00001b.r3.6Cg0002763 [plastid stroma] R-ASA-1119605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119605 Chlorophyll a biosynthesis II none Avena sativa AVESA.00001b.r3.6Cg0002765 R-ASA-9618131 AVESA.00001b.r3.6Cg0002765 [plasma membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.6Cg0002772 R-ASA-9025498-3 AVESA.00001b.r3.6Cg0002772 [endoplasmic reticulum membrane] R-ASA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119325 Sphingolipid metabolism none Avena sativa AVESA.00001b.r3.6Cg0002779 R-ASA-1122656-3 AVESA.00001b.r3.6Cg0002779 [endosome] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.6Cg0002779 R-ASA-5679312-3 AVESA.00001b.r3.6Cg0002779 [plasma membrane] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.6Cg0002833 R-ASA-9658702-3 AVESA.00001b.r3.6Cg0002833 [plastid stroma] R-ASA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119297 Beta-alanine biosynthesis III none Avena sativa AVESA.00001b.r3.6Cg0002969 R-ASA-1127574-2 AVESA.00001b.r3.6Cg0002969 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0002982 R-ASA-2960780-3 AVESA.00001b.r3.6Cg0002982 [cytosol] R-ASA-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119386 UDP-N-acetylgalactosamine biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0002991 R-ASA-1123913 AVESA.00001b.r3.6Cg0002991 [cytosol] R-ASA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119300 Glycolipid desaturation none Avena sativa AVESA.00001b.r3.6Cg0002999 R-ASA-1123092-3 AVESA.00001b.r3.6Cg0002999 [cytosol] R-ASA-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119278 PRPP biosynthesis I none Avena sativa AVESA.00001b.r3.6Cg0003010 R-ASA-9826666-3 AVESA.00001b.r3.6Cg0003010 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.6Cg0003012 R-ASA-9638997-2 AVESA.00001b.r3.6Cg0003012 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.6Cg0003038 R-ASA-1125447-3 AVESA.00001b.r3.6Cg0003038 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.6Cg0003051 R-ASA-1127815-2 AVESA.00001b.r3.6Cg0003051 [cytosol] R-ASA-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119450 Homocysteine biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0003060 R-ASA-9916252 OsEGT1 [nucleoplasm] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.6Cg0003064 R-ASA-5138486-2 AVESA.00001b.r3.6Cg0003064 [plastid stroma] R-ASA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119263 Arginine biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0003064 R-ASA-1123709-2 AVESA.00001b.r3.6Cg0003064 [cytosol] R-ASA-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119318 Proline biosynthesis V (from arginine) none Avena sativa AVESA.00001b.r3.6Cg0003064 R-ASA-1123709-2 AVESA.00001b.r3.6Cg0003064 [cytosol] R-ASA-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119444 Canavanine biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0003077 R-ASA-9924558 NCED1 [plastid] R-ASA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Avena sativa AVESA.00001b.r3.6Cg0003079 R-ASA-1128857-3 AVESA.00001b.r3.6Cg0003079 [cytosol] R-ASA-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119609 Phaseic acid biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0003090 R-ASA-9025500-3 AVESA.00001b.r3.6Cg0003090 [endoplasmic reticulum membrane] R-ASA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119325 Sphingolipid metabolism none Avena sativa AVESA.00001b.r3.6Cg0003093 R-ASA-3321260-2 AVESA.00001b.r3.6Cg0003093 [chloroplast stroma] R-ASA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119287 Vitamin E biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0003095 R-ASA-9826605-2 OsBRXL1 [plasma membrane] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.6Cg0003095 R-ASA-9826610-2 OsBRXL1 [cytosol] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.6Cg0003095 R-ASA-9826605-2 OsBRXL1 [plasma membrane] R-ASA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924451 Shoot (tiller) formation and regulation of tiller angle none Avena sativa AVESA.00001b.r3.6Cg0003095 R-ASA-9826610-2 OsBRXL1 [cytosol] R-ASA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924451 Shoot (tiller) formation and regulation of tiller angle none Avena sativa AVESA.00001b.r3.6Cg0003108 R-ASA-5149678 AVESA.00001b.r3.6Cg0003108 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.6Cg0003114 R-ASA-1129650 AVESA.00001b.r3.6Cg0003114 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0003140 R-ASA-5138481-2 AVESA.00001b.r3.6Cg0003140 [plastid stroma] R-ASA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119263 Arginine biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0003140 R-ASA-5138481-2 AVESA.00001b.r3.6Cg0003140 [plastid stroma] R-ASA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119539 Ornithine biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0003247 R-ASA-1125474-2 AVESA.00001b.r3.6Cg0003247 [cytosol] R-ASA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119437 Glutathione redox reactions I none Avena sativa AVESA.00001b.r3.6Cg0003277 R-ASA-9025447 AVESA.00001b.r3.6Cg0003277 [cytosol] R-ASA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119325 Sphingolipid metabolism none Avena sativa AVESA.00001b.r3.6Cg0003282 R-ASA-1124032 AVESA.00001b.r3.6Cg0003282 [cytosol] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0003303 R-ASA-9025699 AVESA.00001b.r3.6Cg0003303 [plasma membrane] R-ASA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8858053 Polar auxin transport none Avena sativa AVESA.00001b.r3.6Cg0003304 R-ASA-9025772 AVESA.00001b.r3.6Cg0003304 [plasma membrane] R-ASA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025727 Iron uptake and transport in root vascular system none Avena sativa AVESA.00001b.r3.6Cg0003350 R-ASA-1127161 AVESA.00001b.r3.6Cg0003350 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.6Cg0003389 R-ASA-1129245 AVESA.00001b.r3.6Cg0003389 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0003389 R-ASA-1129245 AVESA.00001b.r3.6Cg0003389 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0003389 R-ASA-1129245 AVESA.00001b.r3.6Cg0003389 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.6Cg0003390 R-ASA-1124767-3 AVESA.00001b.r3.6Cg0003390 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0003390 R-ASA-1124767-3 AVESA.00001b.r3.6Cg0003390 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0003390 R-ASA-1124767-3 AVESA.00001b.r3.6Cg0003390 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.6Cg0003392 R-ASA-1125701-2 AVESA.00001b.r3.6Cg0003392 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0003392 R-ASA-1125701-2 AVESA.00001b.r3.6Cg0003392 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0003392 R-ASA-1125701-2 AVESA.00001b.r3.6Cg0003392 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.6Cg0003400 R-ASA-8933738-3 AVESA.00001b.r3.6Cg0003400 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.6Cg0003401 R-ASA-8879002-6 AVESA.00001b.r3.6Cg0003401 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.6Cg0003403 R-ASA-8879002-2 AVESA.00001b.r3.6Cg0003403 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.6Cg0003412 R-ASA-1129896-3 AVESA.00001b.r3.6Cg0003412 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.6Cg0003422 R-ASA-8933833 AVESA.00001b.r3.6Cg0003422 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.6Cg0003422 R-ASA-8933833 AVESA.00001b.r3.6Cg0003422 [nucleoplasm] R-ASA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928995 Drought escape (DE) via ABA-dependent pathway none Avena sativa AVESA.00001b.r3.6Cg0003459 R-ASA-1128431-3 AVESA.00001b.r3.6Cg0003459 [cytosol] R-ASA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119316 Phenylpropanoid biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0003463 R-ASA-1128077-3 AVESA.00001b.r3.6Cg0003463 [cytosol] R-ASA-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119317 Spermine biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0003463 R-ASA-1128077-3 AVESA.00001b.r3.6Cg0003463 [cytosol] R-ASA-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119343 Spermidine biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0003467 R-ASA-8934060 AVESA.00001b.r3.6Cg0003467 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.6Cg0003467 R-ASA-8934060 AVESA.00001b.r3.6Cg0003467 [nucleoplasm] R-ASA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934108 Short day regulated expression of florigens none Avena sativa AVESA.00001b.r3.6Cg0003479 R-ASA-1126689 AVESA.00001b.r3.6Cg0003479 [cytosol] R-ASA-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119353 Linear furanocoumarin biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0003491 R-ASA-1124778-3 AVESA.00001b.r3.6Cg0003491 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.6Cg0003507 R-ASA-1130348-2 AVESA.00001b.r3.6Cg0003507 [cytosol] R-ASA-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0003509 R-ASA-1126647-3 AVESA.00001b.r3.6Cg0003509 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.6Cg0003509 R-ASA-1126647-3 AVESA.00001b.r3.6Cg0003509 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.6Cg0003535 R-ASA-1126662 AVESA.00001b.r3.6Cg0003535 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.6Cg0003535 R-ASA-1126662 AVESA.00001b.r3.6Cg0003535 [mitochondrial matrix] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0003576 R-ASA-1129245-3 AVESA.00001b.r3.6Cg0003576 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0003576 R-ASA-1129245-3 AVESA.00001b.r3.6Cg0003576 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.6Cg0003576 R-ASA-1129245-3 AVESA.00001b.r3.6Cg0003576 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.6Cg0003579 R-ASA-9025439 AVESA.00001b.r3.6Cg0003579 [endoplasmic reticulum membrane] R-ASA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119325 Sphingolipid metabolism none Avena sativa AVESA.00001b.r3.6Cg0003597 R-ASA-5632238-2 AVESA.00001b.r3.6Cg0003597 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.6Cg0003602 R-ASA-9826687 AVESA.00001b.r3.6Cg0003602 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.6Cg0003602 R-ASA-9826687 AVESA.00001b.r3.6Cg0003602 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.6Dg0000090 R-ASA-6787113-2 AVESA.00001b.r3.6Dg0000090 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.6Dg0000135 R-ASA-5632264 AVESA.00001b.r3.6Dg0000135 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.6Dg0000154 R-ASA-1130347 AVESA.00001b.r3.6Dg0000154 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.6Dg0000172 R-ASA-9618197 AVESA.00001b.r3.6Dg0000172 [plasma membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.6Dg0000181 R-ASA-1127442-2 AVESA.00001b.r3.6Dg0000181 [cytosol] R-ASA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119281 Aspartate biosynthesis I none Avena sativa AVESA.00001b.r3.6Dg0000181 R-ASA-5632001-2 AVESA.00001b.r3.6Dg0000181 [plastid stroma] R-ASA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119553 Asparagine biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0000198 R-ASA-4415060 AVESA.00001b.r3.6Dg0000198 [plasma membrane] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.6Dg0000198 R-ASA-4415065 phospho-AVESA.00001b.r3.6Dg0000198 [plasma membrane] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.6Dg0000240 R-ASA-5654827 AVESA.00001b.r3.6Dg0000240 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.6Dg0000270 R-ASA-5633387-2 AVESA.00001b.r3.6Dg0000270 [mitochondrial matrix] R-ASA-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119445 Beta-alanine biosynthesis II none Avena sativa AVESA.00001b.r3.6Dg0000278 R-ASA-9639957 AVESA.00001b.r3.6Dg0000278 [plasma membrane] R-ASA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639861 Development of root hair none Avena sativa AVESA.00001b.r3.6Dg0000348 R-ASA-1124067-3 AVESA.00001b.r3.6Dg0000348 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0000348 R-ASA-9626520-3 AVESA.00001b.r3.6Dg0000348 [plastid stroma] R-ASA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9626305 Regulatory network of nutrient accumulation none Avena sativa AVESA.00001b.r3.6Dg0000354 R-ASA-1129851-3 AVESA.00001b.r3.6Dg0000354 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.6Dg0000354 R-ASA-1129851-3 AVESA.00001b.r3.6Dg0000354 [mitochondrial matrix] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0000382 R-ASA-5655094 AVESA.00001b.r3.6Dg0000382 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0000410 R-ASA-9928961-3 AVESA.00001b.r3.6Dg0000410 [nucleoplasm] R-ASA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928995 Drought escape (DE) via ABA-dependent pathway none Avena sativa AVESA.00001b.r3.6Dg0000429 R-ASA-5655076 AVESA.00001b.r3.6Dg0000429 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0000437 R-ASA-9630306-3 AVESA.00001b.r3.6Dg0000437 [nucleoplasm] R-ASA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640760 G1 phase none Avena sativa AVESA.00001b.r3.6Dg0000461 R-ASA-5679294 AVESA.00001b.r3.6Dg0000461 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.6Dg0000477 R-ASA-1124797-4 AVESA.00001b.r3.6Dg0000477 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0000529 R-ASA-1127429-2 AVESA.00001b.r3.6Dg0000529 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0000540 R-ASA-9025498-2 AVESA.00001b.r3.6Dg0000540 [endoplasmic reticulum membrane] R-ASA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119325 Sphingolipid metabolism none Avena sativa AVESA.00001b.r3.6Dg0000545 R-ASA-9618131-2 AVESA.00001b.r3.6Dg0000545 [plasma membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.6Dg0000547 R-ASA-1122261-2 AVESA.00001b.r3.6Dg0000547 [plastid stroma] R-ASA-1119602 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119602 Phytyl-PP biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0000547 R-ASA-1122261-2 AVESA.00001b.r3.6Dg0000547 [plastid stroma] R-ASA-1119605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119605 Chlorophyll a biosynthesis II none Avena sativa AVESA.00001b.r3.6Dg0000548 R-ASA-9918275-3 soluble Starch Synthase (SSII-2/SSIIb) [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0000552 R-ASA-1122656-2 AVESA.00001b.r3.6Dg0000552 [endosome] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.6Dg0000552 R-ASA-5679312-2 AVESA.00001b.r3.6Dg0000552 [plasma membrane] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.6Dg0000595 R-ASA-9658702 AVESA.00001b.r3.6Dg0000595 [plastid stroma] R-ASA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119297 Beta-alanine biosynthesis III none Avena sativa AVESA.00001b.r3.6Dg0000658 R-ASA-5632087 AVESA.00001b.r3.6Dg0000658 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.6Dg0000698 R-ASA-1127574-3 AVESA.00001b.r3.6Dg0000698 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0000708 R-ASA-2960780-2 AVESA.00001b.r3.6Dg0000708 [cytosol] R-ASA-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119386 UDP-N-acetylgalactosamine biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0000716 R-ASA-1123913-2 AVESA.00001b.r3.6Dg0000716 [cytosol] R-ASA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119300 Glycolipid desaturation none Avena sativa AVESA.00001b.r3.6Dg0000721 R-ASA-1123092 AVESA.00001b.r3.6Dg0000721 [cytosol] R-ASA-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119278 PRPP biosynthesis I none Avena sativa AVESA.00001b.r3.6Dg0000730 R-ASA-1125802-2 AVESA.00001b.r3.6Dg0000730 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.6Dg0000731 R-ASA-9826666-2 AVESA.00001b.r3.6Dg0000731 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.6Dg0000733 R-ASA-9638997 AVESA.00001b.r3.6Dg0000733 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.6Dg0000736 R-ASA-9916108-3 AVESA.00001b.r3.6Dg0000736 [extracellular region] R-ASA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119403 Removal of superoxide radicals none Avena sativa AVESA.00001b.r3.6Dg0000736 R-ASA-9916108-3 AVESA.00001b.r3.6Dg0000736 [extracellular region] R-ASA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9607185 Generation of superoxide radicals none Avena sativa AVESA.00001b.r3.6Dg0000755 R-ASA-1125447-2 AVESA.00001b.r3.6Dg0000755 [plastid stroma] R-ASA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119509 Histidine biosynthesis I none Avena sativa AVESA.00001b.r3.6Dg0000765 R-ASA-1127815 AVESA.00001b.r3.6Dg0000765 [cytosol] R-ASA-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119450 Homocysteine biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0000771 R-ASA-9916252-2 OsEGT1 [nucleoplasm] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.6Dg0000775 R-ASA-5138486-3 AVESA.00001b.r3.6Dg0000775 [plastid stroma] R-ASA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119263 Arginine biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0000775 R-ASA-1123709-3 AVESA.00001b.r3.6Dg0000775 [cytosol] R-ASA-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119318 Proline biosynthesis V (from arginine) none Avena sativa AVESA.00001b.r3.6Dg0000775 R-ASA-1123709-3 AVESA.00001b.r3.6Dg0000775 [cytosol] R-ASA-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119444 Canavanine biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0000783 R-ASA-9924558-2 NCED1 [plastid] R-ASA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Avena sativa AVESA.00001b.r3.6Dg0000784 R-ASA-1128857-2 AVESA.00001b.r3.6Dg0000784 [cytosol] R-ASA-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119609 Phaseic acid biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0000792 R-ASA-9025500-2 AVESA.00001b.r3.6Dg0000792 [endoplasmic reticulum membrane] R-ASA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119325 Sphingolipid metabolism none Avena sativa AVESA.00001b.r3.6Dg0000793 R-ASA-3321260 AVESA.00001b.r3.6Dg0000793 [chloroplast stroma] R-ASA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119287 Vitamin E biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0000794 R-ASA-9826605 OsBRXL1 [plasma membrane] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.6Dg0000794 R-ASA-9826610 OsBRXL1 [cytosol] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.6Dg0000794 R-ASA-9826605 OsBRXL1 [plasma membrane] R-ASA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924451 Shoot (tiller) formation and regulation of tiller angle none Avena sativa AVESA.00001b.r3.6Dg0000794 R-ASA-9826610 OsBRXL1 [cytosol] R-ASA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924451 Shoot (tiller) formation and regulation of tiller angle none Avena sativa AVESA.00001b.r3.6Dg0000809 R-ASA-5149678-3 AVESA.00001b.r3.6Dg0000809 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.6Dg0000815 R-ASA-1129650-2 AVESA.00001b.r3.6Dg0000815 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0000831 R-ASA-5138481-3 AVESA.00001b.r3.6Dg0000831 [plastid stroma] R-ASA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119263 Arginine biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0000831 R-ASA-5138481-3 AVESA.00001b.r3.6Dg0000831 [plastid stroma] R-ASA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119539 Ornithine biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0000854 R-ASA-1124797-2 AVESA.00001b.r3.6Dg0000854 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0000868 R-ASA-1129922-2 AVESA.00001b.r3.6Dg0000868 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.6Dg0000880 R-ASA-9826696 AVESA.00001b.r3.6Dg0000880 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.6Dg0000928 R-ASA-1125474 AVESA.00001b.r3.6Dg0000928 [cytosol] R-ASA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119437 Glutathione redox reactions I none Avena sativa AVESA.00001b.r3.6Dg0000951 R-ASA-9025447-3 AVESA.00001b.r3.6Dg0000951 [cytosol] R-ASA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119325 Sphingolipid metabolism none Avena sativa AVESA.00001b.r3.6Dg0000957 R-ASA-1124032-3 AVESA.00001b.r3.6Dg0000957 [cytosol] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0000964 R-ASA-1126053-2 AVESA.00001b.r3.6Dg0000964 [mitochondrial matrix] R-ASA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119479 Valine degradation none Avena sativa AVESA.00001b.r3.6Dg0000981 R-ASA-9025699-3 AVESA.00001b.r3.6Dg0000981 [plasma membrane] R-ASA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8858053 Polar auxin transport none Avena sativa AVESA.00001b.r3.6Dg0000982 R-ASA-9025772-2 AVESA.00001b.r3.6Dg0000982 [plasma membrane] R-ASA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025727 Iron uptake and transport in root vascular system none Avena sativa AVESA.00001b.r3.6Dg0001027 R-ASA-1125730 AVESA.00001b.r3.6Dg0001027 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.6Dg0001028 R-ASA-1127161-2 AVESA.00001b.r3.6Dg0001028 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.6Dg0001043 R-ASA-1125701-3 AVESA.00001b.r3.6Dg0001043 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0001043 R-ASA-1125701-3 AVESA.00001b.r3.6Dg0001043 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0001043 R-ASA-1125701-3 AVESA.00001b.r3.6Dg0001043 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.6Dg0001044 R-ASA-1124767-2 AVESA.00001b.r3.6Dg0001044 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0001044 R-ASA-1124767-2 AVESA.00001b.r3.6Dg0001044 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0001044 R-ASA-1124767-2 AVESA.00001b.r3.6Dg0001044 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.6Dg0001045 R-ASA-1129245-11 AVESA.00001b.r3.6Dg0001045 [cytosol] R-ASA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119261 Salicylate biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0001045 R-ASA-1129245-11 AVESA.00001b.r3.6Dg0001045 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0001045 R-ASA-1129245-11 AVESA.00001b.r3.6Dg0001045 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.6Dg0001076 R-ASA-8933738 AVESA.00001b.r3.6Dg0001076 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.6Dg0001078 R-ASA-8879002-5 AVESA.00001b.r3.6Dg0001078 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.6Dg0001079 R-ASA-8879002-3 AVESA.00001b.r3.6Dg0001079 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.6Dg0001080 R-ASA-8879002-4 AVESA.00001b.r3.6Dg0001080 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.6Dg0001081 R-ASA-8879002 AVESA.00001b.r3.6Dg0001081 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.6Dg0001091 R-ASA-1129896 AVESA.00001b.r3.6Dg0001091 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.6Dg0001104 R-ASA-8933833-2 AVESA.00001b.r3.6Dg0001104 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.6Dg0001104 R-ASA-8933833-2 AVESA.00001b.r3.6Dg0001104 [nucleoplasm] R-ASA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928995 Drought escape (DE) via ABA-dependent pathway none Avena sativa AVESA.00001b.r3.6Dg0001140 R-ASA-1128431-2 AVESA.00001b.r3.6Dg0001140 [cytosol] R-ASA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119316 Phenylpropanoid biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0001142 R-ASA-1128077-2 AVESA.00001b.r3.6Dg0001142 [cytosol] R-ASA-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119317 Spermine biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0001142 R-ASA-1128077-2 AVESA.00001b.r3.6Dg0001142 [cytosol] R-ASA-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119343 Spermidine biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0001150 R-ASA-1124523 AVESA.00001b.r3.6Dg0001150 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.6Dg0001150 R-ASA-1124523 AVESA.00001b.r3.6Dg0001150 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0001171 R-ASA-1124778-2 AVESA.00001b.r3.6Dg0001171 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.6Dg0001183 R-ASA-1130348-3 AVESA.00001b.r3.6Dg0001183 [cytosol] R-ASA-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0001185 R-ASA-1126647-2 AVESA.00001b.r3.6Dg0001185 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.6Dg0001185 R-ASA-1126647-2 AVESA.00001b.r3.6Dg0001185 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.6Dg0001210 R-ASA-1126662-3 AVESA.00001b.r3.6Dg0001210 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.6Dg0001210 R-ASA-1126662-3 AVESA.00001b.r3.6Dg0001210 [mitochondrial matrix] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0001263 R-ASA-5632238 AVESA.00001b.r3.6Dg0001263 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.6Dg0001268 R-ASA-9826687-2 AVESA.00001b.r3.6Dg0001268 [nucleoplasm] R-ASA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9766881 TF network involved in salinity response none Avena sativa AVESA.00001b.r3.6Dg0001268 R-ASA-9826687-2 AVESA.00001b.r3.6Dg0001268 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.6Dg0001270 R-ASA-1122564-2 AVESA.00001b.r3.6Dg0001270 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0001283 R-ASA-8933710-3 AVESA.00001b.r3.6Dg0001283 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.6Dg0001288 R-ASA-1128950-3 AVESA.00001b.r3.6Dg0001288 [cytosol] R-ASA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119379 Flavin biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0001296 R-ASA-1128319-3 AVESA.00001b.r3.6Dg0001296 [cytosol] R-ASA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119341 Galactosylcyclitol biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0001311 R-ASA-1123255 AVESA.00001b.r3.6Dg0001311 [cytosol] R-ASA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119506 tyrosine degradation I none Avena sativa AVESA.00001b.r3.6Dg0001315 R-ASA-9675352-4 AVESA.00001b.r3.6Dg0001315 [plasma membrane] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.6Dg0001328 R-ASA-1125309-2 AVESA.00001b.r3.6Dg0001328 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.6Dg0001361 R-ASA-9675481 AVESA.00001b.r3.6Dg0001361 [cytosol] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.6Dg0001366 R-ASA-1129068-2 AVESA.00001b.r3.6Dg0001366 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.6Dg0001366 R-ASA-1129068-2 AVESA.00001b.r3.6Dg0001366 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0001389 R-ASA-9640739-3 AVESA.00001b.r3.6Dg0001389 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.6Dg0001397 R-ASA-1127065 AVESA.00001b.r3.6Dg0001397 [cytosol] R-ASA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119304 Putrescine biosynthesis II none Avena sativa AVESA.00001b.r3.6Dg0001440 R-ASA-1130304 AVESA.00001b.r3.6Dg0001440 [cytosol] R-ASA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119291 Nitrate assimilation none Avena sativa AVESA.00001b.r3.6Dg0001441 R-ASA-8933714-2 AVESA.00001b.r3.6Dg0001441 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.6Dg0001467 R-ASA-9675818 AVESA.00001b.r3.6Dg0001467 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.6Dg0001492 R-ASA-1123610-2 AVESA.00001b.r3.6Dg0001492 [cytosol] R-ASA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119389 Phenylalanine biosynthesis I none Avena sativa AVESA.00001b.r3.6Dg0001492 R-ASA-1123610-2 AVESA.00001b.r3.6Dg0001492 [cytosol] R-ASA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119506 tyrosine degradation I none Avena sativa AVESA.00001b.r3.6Dg0001518 R-ASA-1129571-2 AVESA.00001b.r3.6Dg0001518 [mitochondrion] R-ASA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119365 Lysine degradation II none Avena sativa AVESA.00001b.r3.6Dg0001529 R-ASA-9639088-3 AVESA.00001b.r3.6Dg0001529 [plasma membrane] R-ASA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639136 Response to Aluminum stress none Avena sativa AVESA.00001b.r3.6Dg0001558 R-ASA-1123210-3 AVESA.00001b.r3.6Dg0001558 [cytosol] R-ASA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119516 Trehalose biosynthesis I none Avena sativa AVESA.00001b.r3.6Dg0001605 R-ASA-9640704-2 AVESA.00001b.r3.6Dg0001605 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.6Dg0001605 R-ASA-9640704-2 AVESA.00001b.r3.6Dg0001605 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.6Dg0001605 R-ASA-9640704-2 AVESA.00001b.r3.6Dg0001605 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.6Dg0001606 R-ASA-1123797-3 AVESA.00001b.r3.6Dg0001606 [cytosol] R-ASA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119281 Aspartate biosynthesis I none Avena sativa AVESA.00001b.r3.6Dg0001656 R-ASA-9640689-3 AVESA.00001b.r3.6Dg0001656 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.6Dg0001656 R-ASA-9640689-3 AVESA.00001b.r3.6Dg0001656 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.6Dg0001656 R-ASA-9640689-3 AVESA.00001b.r3.6Dg0001656 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.6Dg0001672 R-ASA-1123336 AVESA.00001b.r3.6Dg0001672 [cytosol] R-ASA-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119342 Gamma-glutamyl cycle none Avena sativa AVESA.00001b.r3.6Dg0001672 R-ASA-1123336 AVESA.00001b.r3.6Dg0001672 [cytosol] R-ASA-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119483 Glutathione biosynthesis none Avena sativa AVESA.00001b.r3.6Dg0001699 R-ASA-1129113-3 AVESA.00001b.r3.6Dg0001699 [cytosol] R-ASA-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119298 Glutathione redox reactions II none Avena sativa AVESA.00001b.r3.6Dg0001699 R-ASA-1129113-3 AVESA.00001b.r3.6Dg0001699 [cytosol] R-ASA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119437 Glutathione redox reactions I none Avena sativa AVESA.00001b.r3.6Dg0001734 R-ASA-1128385 AVESA.00001b.r3.6Dg0001734 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.6Dg0001749 R-ASA-9639018-3 AVESA.00001b.r3.6Dg0001749 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.6Dg0001788 R-ASA-1126131 AVESA.00001b.r3.6Dg0001788 [cytosol] R-ASA-1119528 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119528 Beta-alanine betaine biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0000063 R-ASA-9611477-3 phospho-phosphorylated-RLCK176 [cytosol] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.7Ag0000067 R-ASA-9645809-2 AVESA.00001b.r3.7Ag0000067 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.7Ag0000067 R-ASA-9645809-2 AVESA.00001b.r3.7Ag0000067 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.7Ag0000067 R-ASA-9645809-2 AVESA.00001b.r3.7Ag0000067 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.7Ag0000068 R-ASA-9645809-6 AVESA.00001b.r3.7Ag0000068 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.7Ag0000068 R-ASA-9645809-6 AVESA.00001b.r3.7Ag0000068 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.7Ag0000068 R-ASA-9645809-6 AVESA.00001b.r3.7Ag0000068 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.7Ag0000105 R-ASA-1124742 AVESA.00001b.r3.7Ag0000105 [cytosol] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0000105 R-ASA-1124742 AVESA.00001b.r3.7Ag0000105 [cytosol] R-ASA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119570 Cytosolic glycolysis none Avena sativa AVESA.00001b.r3.7Ag0000175 R-ASA-9681885 AVESA.00001b.r3.7Ag0000175 [Golgi membrane] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.7Ag0000185 R-ASA-5654933 AVESA.00001b.r3.7Ag0000185 [Golgi lumen] R-ASA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654909 Xylan biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0000213 R-ASA-9611863 AVESA.00001b.r3.7Ag0000213 [mitochondrial matrix] R-ASA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119479 Valine degradation none Avena sativa AVESA.00001b.r3.7Ag0000244 R-ASA-1129184 AVESA.00001b.r3.7Ag0000244 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.7Ag0000244 R-ASA-1129184 AVESA.00001b.r3.7Ag0000244 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.7Ag0000244 R-ASA-5606505 AVESA.00001b.r3.7Ag0000244 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.7Ag0000252 R-ASA-1127481 AVESA.00001b.r3.7Ag0000252 [cytosol] R-ASA-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119342 Gamma-glutamyl cycle none Avena sativa AVESA.00001b.r3.7Ag0000252 R-ASA-1127481 AVESA.00001b.r3.7Ag0000252 [cytosol] R-ASA-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119483 Glutathione biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0000253 R-ASA-5138505-2 AVESA.00001b.r3.7Ag0000253 [plastid stroma] R-ASA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119263 Arginine biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0000253 R-ASA-5138505-2 AVESA.00001b.r3.7Ag0000253 [plastid stroma] R-ASA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119539 Ornithine biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0000253 R-ASA-5138505-2 AVESA.00001b.r3.7Ag0000253 [plastid stroma] R-ASA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119622 Arginine biosynthesis II (acetyl cycle) none Avena sativa AVESA.00001b.r3.7Ag0000259 R-ASA-9826705-3 OSH71 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.7Ag0000275 R-ASA-1124969 AVESA.00001b.r3.7Ag0000275 [cytosol] R-ASA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119265 Tetrahydrofolate biosynthesis I none Avena sativa AVESA.00001b.r3.7Ag0000275 R-ASA-1124969 AVESA.00001b.r3.7Ag0000275 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.7Ag0000321 R-ASA-9826643-2 AVESA.00001b.r3.7Ag0000321 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.7Ag0000356 R-ASA-5632341-2 AVESA.00001b.r3.7Ag0000356 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.7Ag0000356 R-ASA-5632170-2 phospho-AVESA.00001b.r3.7Ag0000356 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.7Ag0000420 R-ASA-5608164-2 AVESA.00001b.r3.7Ag0000420 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.7Ag0000420 R-ASA-5608164-2 AVESA.00001b.r3.7Ag0000420 [nucleoplasm] R-ASA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030557 Lateral root initiation none Avena sativa AVESA.00001b.r3.7Ag0000420 R-ASA-5608164-2 AVESA.00001b.r3.7Ag0000420 [nucleoplasm] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.7Ag0000420 R-ASA-9658967-2 AVESA.00001b.r3.7Ag0000420 [cytosol] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.7Ag0000542 R-ASA-1127734-3 AVESA.00001b.r3.7Ag0000542 [cytosol] R-ASA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119506 tyrosine degradation I none Avena sativa AVESA.00001b.r3.7Ag0000554 R-ASA-6787880-3 AVESA.00001b.r3.7Ag0000554 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.7Ag0000559 R-ASA-1123561-2 AVESA.00001b.r3.7Ag0000559 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.7Ag0000565 R-ASA-1123609-2 AVESA.00001b.r3.7Ag0000565 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0000579 R-ASA-1127031-4 AVESA.00001b.r3.7Ag0000579 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.7Ag0000616 R-ASA-8933787-3 AVESA.00001b.r3.7Ag0000616 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.7Ag0000622 R-ASA-1128298-2 AVESA.00001b.r3.7Ag0000622 [cytosol] R-ASA-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119271 Threonine degradation none Avena sativa AVESA.00001b.r3.7Ag0000622 R-ASA-1128298-2 AVESA.00001b.r3.7Ag0000622 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.7Ag0000647 R-ASA-5632261-2 AVESA.00001b.r3.7Ag0000647 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.7Ag0000683 R-ASA-1123832-3 AVESA.00001b.r3.7Ag0000683 [cytosol] R-ASA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119304 Putrescine biosynthesis II none Avena sativa AVESA.00001b.r3.7Ag0000683 R-ASA-1123832-3 AVESA.00001b.r3.7Ag0000683 [cytosol] R-ASA-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119447 Putrescine biosynthesis I none Avena sativa AVESA.00001b.r3.7Ag0000686 R-ASA-9918210 granule-bound starch synthase 1 (GBSSI, or Waxy) [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0000686 R-ASA-9626344 AVESA.00001b.r3.7Ag0000686 [plastid stroma] R-ASA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9626305 Regulatory network of nutrient accumulation none Avena sativa AVESA.00001b.r3.7Ag0000697 R-ASA-1130247-3 AVESA.00001b.r3.7Ag0000697 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.7Ag0000700 R-ASA-1123211-2 AVESA.00001b.r3.7Ag0000700 [cytosol] R-ASA-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Avena sativa AVESA.00001b.r3.7Ag0000700 R-ASA-1123211-2 AVESA.00001b.r3.7Ag0000700 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0000700 R-ASA-1123211-2 AVESA.00001b.r3.7Ag0000700 [cytosol] R-ASA-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119439 Cholesterol biosynthesis III (via desmosterol) none Avena sativa AVESA.00001b.r3.7Ag0000700 R-ASA-1123211-2 AVESA.00001b.r3.7Ag0000700 [cytosol] R-ASA-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119559 Cholesterol biosynthesis I none Avena sativa AVESA.00001b.r3.7Ag0000709 R-ASA-9031256-2 AVESA.00001b.r3.7Ag0000709 [endoplasmic reticulum lumen] R-ASA-9031225 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9031225 Response to phosphate deficiency none Avena sativa AVESA.00001b.r3.7Ag0000709 R-ASA-9031289-2 AVESA.00001b.r3.7Ag0000709 [plasma membrane] R-ASA-9031225 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9031225 Response to phosphate deficiency none Avena sativa AVESA.00001b.r3.7Ag0000709 R-ASA-9031289-2 AVESA.00001b.r3.7Ag0000709 [plasma membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.7Ag0000718 R-ASA-8878987-2 AVESA.00001b.r3.7Ag0000718 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.7Ag0000726 R-ASA-1129282 AVESA.00001b.r3.7Ag0000726 [cytosol] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0000726 R-ASA-1129282 AVESA.00001b.r3.7Ag0000726 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.7Ag0000761 R-ASA-1129355-2 AVESA.00001b.r3.7Ag0000761 [plastid] R-ASA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119403 Removal of superoxide radicals none Avena sativa AVESA.00001b.r3.7Ag0000785 R-ASA-1129769-8 AVESA.00001b.r3.7Ag0000785 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0000785 R-ASA-1129769-8 AVESA.00001b.r3.7Ag0000785 [cytosol] R-ASA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119618 13-LOX and 13-HPL pathway none Avena sativa AVESA.00001b.r3.7Ag0000807 R-ASA-5654840-3 AVESA.00001b.r3.7Ag0000807 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.7Ag0000807 R-ASA-5654840-3 AVESA.00001b.r3.7Ag0000807 [nucleoplasm] R-ASA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Avena sativa AVESA.00001b.r3.7Ag0000821 R-ASA-1128586-2 AVESA.00001b.r3.7Ag0000821 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0000860 R-ASA-8879009 AVESA.00001b.r3.7Ag0000860 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.7Ag0000866 R-ASA-1125910-3 AVESA.00001b.r3.7Ag0000866 [plastid stroma] R-ASA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119367 Polyisoprenoid biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0000891 R-ASA-1127625 AVESA.00001b.r3.7Ag0000891 [cytosol] R-ASA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119265 Tetrahydrofolate biosynthesis I none Avena sativa AVESA.00001b.r3.7Ag0000891 R-ASA-1127625 AVESA.00001b.r3.7Ag0000891 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.7Ag0000902 R-ASA-1123042-3 AVESA.00001b.r3.7Ag0000902 R-ASA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119400 Methionine biosynthesis II none Avena sativa AVESA.00001b.r3.7Ag0000907 R-ASA-1129485 AVESA.00001b.r3.7Ag0000907 [cytosol] R-ASA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119341 Galactosylcyclitol biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0000913 R-ASA-1127346 AVESA.00001b.r3.7Ag0000913 [cytosol] R-ASA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119316 Phenylpropanoid biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0000971 R-ASA-9640675-3 AVESA.00001b.r3.7Ag0000971 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.7Ag0000971 R-ASA-9640675-3 AVESA.00001b.r3.7Ag0000971 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.7Ag0000988 R-ASA-9675335-2 AVESA.00001b.r3.7Ag0000988 [mitochondrial matrix] R-ASA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675508 Root elongation none Avena sativa AVESA.00001b.r3.7Ag0001007 R-ASA-9639003 AVESA.00001b.r3.7Ag0001007 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.7Ag0001008 R-ASA-1124377-3 AVESA.00001b.r3.7Ag0001008 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.7Ag0001008 R-ASA-1124377-3 AVESA.00001b.r3.7Ag0001008 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0001016 R-ASA-5608125-2 AVESA.00001b.r3.7Ag0001016 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.7Ag0001035 R-ASA-5655090-2 AVESA.00001b.r3.7Ag0001035 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0001053 R-ASA-9611524-3 LYP6 [plasma membrane] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.7Ag0001070 R-ASA-5655100 AVESA.00001b.r3.7Ag0001070 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0001071 R-ASA-5655095 AVESA.00001b.r3.7Ag0001071 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0001072 R-ASA-5655090-3 AVESA.00001b.r3.7Ag0001072 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0001149 R-ASA-9618126-2 AVESA.00001b.r3.7Ag0001149 [plasma membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.7Ag0001170 R-ASA-1124759 AVESA.00001b.r3.7Ag0001170 [endosome] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.7Ag0001170 R-ASA-5679306 AVESA.00001b.r3.7Ag0001170 [plasma membrane] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.7Ag0001266 R-ASA-1123867-2 AVESA.00001b.r3.7Ag0001266 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0001267 R-ASA-5149644 AVESA.00001b.r3.7Ag0001267 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.7Ag0001275 R-ASA-9826604 AVESA.00001b.r3.7Ag0001275 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.7Ag0001385 R-ASA-1130152-3 AVESA.00001b.r3.7Ag0001385 [cytosol] R-ASA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119394 Pantothenate and coenzyme A biosynthesis III none Avena sativa AVESA.00001b.r3.7Ag0001483 R-ASA-5654755 AVESA.00001b.r3.7Ag0001483 [cytosol] R-ASA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119393 Asparagine degradation I none Avena sativa AVESA.00001b.r3.7Ag0001513 R-ASA-8987571-2 AVESA.00001b.r3.7Ag0001513 [peroxisomal matrix] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.7Ag0001530 R-ASA-6786987-2 AVESA.00001b.r3.7Ag0001530 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.7Ag0001531 R-ASA-1126107-3 AVESA.00001b.r3.7Ag0001531 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0001531 R-ASA-1126107-3 AVESA.00001b.r3.7Ag0001531 [cytosol] R-ASA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119618 13-LOX and 13-HPL pathway none Avena sativa AVESA.00001b.r3.7Ag0001547 R-ASA-1124496-3 AVESA.00001b.r3.7Ag0001547 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.7Ag0001628 R-ASA-1124056-3 AVESA.00001b.r3.7Ag0001628 [cytosol] R-ASA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119394 Pantothenate and coenzyme A biosynthesis III none Avena sativa AVESA.00001b.r3.7Ag0001638 R-ASA-4827081 AVESA.00001b.r3.7Ag0001638 [plastid stroma] R-ASA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-4827054 Tetrapyrrole biosynthesis I none Avena sativa AVESA.00001b.r3.7Ag0001665 R-ASA-9611549-3 phospho-phosphorylated-CERK1 [plasma membrane] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.7Ag0001665 R-ASA-9611466-3 CERK1 [plasma membrane] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.7Ag0001668 R-ASA-9640763 AVESA.00001b.r3.7Ag0001668 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.7Ag0001668 R-ASA-9640885 phospho-AVESA.00001b.r3.7Ag0001668 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.7Ag0001683 R-ASA-1124791-3 AVESA.00001b.r3.7Ag0001683 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.7Ag0001710 R-ASA-1130277 AVESA.00001b.r3.7Ag0001710 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.7Ag0001737 R-ASA-1123786-3 AVESA.00001b.r3.7Ag0001737 R-ASA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119403 Removal of superoxide radicals none Avena sativa AVESA.00001b.r3.7Ag0001756 R-ASA-1127357 AVESA.00001b.r3.7Ag0001756 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.7Ag0001756 R-ASA-1127357 AVESA.00001b.r3.7Ag0001756 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.7Ag0001791 R-ASA-1127733 AVESA.00001b.r3.7Ag0001791 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.7Ag0001791 R-ASA-1127733 AVESA.00001b.r3.7Ag0001791 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0001797 R-ASA-8868961-2 AVESA.00001b.r3.7Ag0001797 [plant-type vacuole membrane] R-ASA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8868949 Intracellular auxin transport none Avena sativa AVESA.00001b.r3.7Ag0001801 R-ASA-1126828-3 AVESA.00001b.r3.7Ag0001801 [plastid] R-ASA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119403 Removal of superoxide radicals none Avena sativa AVESA.00001b.r3.7Ag0001872 R-ASA-1125832-2 AVESA.00001b.r3.7Ag0001872 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0001874 R-ASA-5632192 AVESA.00001b.r3.7Ag0001874 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.7Ag0001921 R-ASA-1127880-2 AVESA.00001b.r3.7Ag0001921 [cytosol] R-ASA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119291 Nitrate assimilation none Avena sativa AVESA.00001b.r3.7Ag0001926 R-ASA-9645866-3 AVESA.00001b.r3.7Ag0001926 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.7Ag0001926 R-ASA-9645866-3 AVESA.00001b.r3.7Ag0001926 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.7Ag0001927 R-ASA-1122843-2 AVESA.00001b.r3.7Ag0001927 [cytosol] R-ASA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119458 Glutamate degradation none Avena sativa AVESA.00001b.r3.7Ag0001938 R-ASA-1130153-3 AVESA.00001b.r3.7Ag0001938 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0001938 R-ASA-6787115-3 AVESA.00001b.r3.7Ag0001938 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.7Ag0001974 R-ASA-1128200-2 AVESA.00001b.r3.7Ag0001974 [cytosol] R-ASA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119316 Phenylpropanoid biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0001977 R-ASA-1123148-3 AVESA.00001b.r3.7Ag0001977 [cytosol] R-ASA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119300 Glycolipid desaturation none Avena sativa AVESA.00001b.r3.7Ag0002028 R-ASA-1127254-3 AVESA.00001b.r3.7Ag0002028 [cytosol] R-ASA-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119317 Spermine biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0002028 R-ASA-1127254-3 AVESA.00001b.r3.7Ag0002028 [cytosol] R-ASA-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119343 Spermidine biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0002031 R-ASA-5632179 AVESA.00001b.r3.7Ag0002031 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.7Ag0002031 R-ASA-5632179 AVESA.00001b.r3.7Ag0002031 [cytosol] R-ASA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934257 Transition from vegetative to reproductive shoot apical meristem none Avena sativa AVESA.00001b.r3.7Ag0002031 R-ASA-9927894 AVESA.00001b.r3.7Ag0002031 [nucleoplasm] R-ASA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934257 Transition from vegetative to reproductive shoot apical meristem none Avena sativa AVESA.00001b.r3.7Ag0002031 R-ASA-5632179 AVESA.00001b.r3.7Ag0002031 [cytosol] R-ASA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609102 Flower development none Avena sativa AVESA.00001b.r3.7Ag0002031 R-ASA-5632179 AVESA.00001b.r3.7Ag0002031 [cytosol] R-ASA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928831 Severe drought none Avena sativa AVESA.00001b.r3.7Ag0002031 R-ASA-9927894 AVESA.00001b.r3.7Ag0002031 [nucleoplasm] R-ASA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928831 Severe drought none Avena sativa AVESA.00001b.r3.7Ag0002040 R-ASA-9675280-3 AVESA.00001b.r3.7Ag0002040 [nucleoplasm] R-ASA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030680 Crown root development none Avena sativa AVESA.00001b.r3.7Ag0002049 R-ASA-6787007-2 AVESA.00001b.r3.7Ag0002049 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.7Ag0002049 R-ASA-6787147-2 AVESA.00001b.r3.7Ag0002049 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.7Ag0002049 R-ASA-9826596-2 OSJAZ3 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.7Ag0002057 R-ASA-1129514-3 AVESA.00001b.r3.7Ag0002057 [chloroplast] R-ASA-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119579 Glycine betaine biosynthesis III none Avena sativa AVESA.00001b.r3.7Ag0002156 R-ASA-1126715 AVESA.00001b.r3.7Ag0002156 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.7Ag0002212 R-ASA-1122818-2 AVESA.00001b.r3.7Ag0002212 [cytosol] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0002317 R-ASA-1124048-2 AVESA.00001b.r3.7Ag0002317 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.7Ag0002360 R-ASA-9684723-4 AVESA.00001b.r3.7Ag0002360 [cytosol] R-ASA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609102 Flower development none Avena sativa AVESA.00001b.r3.7Ag0002382 R-ASA-9675426-2 AVESA.00001b.r3.7Ag0002382 [nucleoplasm] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.7Ag0002398 R-ASA-9609608-3 AVESA.00001b.r3.7Ag0002398 [cytosol] R-ASA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609573 Tricin biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0002398 R-ASA-9916171-3 OsOMT [cytosol] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.7Ag0002398 R-ASA-9916312-3 OsOMT [nucleoplasm] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.7Ag0002401 R-ASA-8933759-2 AVESA.00001b.r3.7Ag0002401 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.7Ag0002404 R-ASA-6788261 AVESA.00001b.r3.7Ag0002404 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.7Ag0002431 R-ASA-5632174 AVESA.00001b.r3.7Ag0002431 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.7Ag0002431 R-ASA-5632174 AVESA.00001b.r3.7Ag0002431 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.7Ag0002431 R-ASA-5632174 AVESA.00001b.r3.7Ag0002431 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.7Ag0002431 R-ASA-5632174 AVESA.00001b.r3.7Ag0002431 [nucleoplasm] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.7Ag0002453 R-ASA-1129160-3 AVESA.00001b.r3.7Ag0002453 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.7Ag0002453 R-ASA-1129160-3 AVESA.00001b.r3.7Ag0002453 [mitochondrial matrix] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0002462 R-ASA-9918175-2 AVESA.00001b.r3.7Ag0002462 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0002510 R-ASA-6787934-2 AVESA.00001b.r3.7Ag0002510 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.7Ag0002524 R-ASA-9918268-2 soluble Starch Synthase (SSIIIA/SSIII-2) [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0002544 R-ASA-9026139-3 AVESA.00001b.r3.7Ag0002544 [mitochondrion] R-ASA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119458 Glutamate degradation none Avena sativa AVESA.00001b.r3.7Ag0002544 R-ASA-1130288-3 AVESA.00001b.r3.7Ag0002544 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.7Ag0002587 R-ASA-1123150 AVESA.00001b.r3.7Ag0002587 [cytosol] R-ASA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0002587 R-ASA-1123150 AVESA.00001b.r3.7Ag0002587 [cytosol] R-ASA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119438 Secologanin and strictosidine biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0002587 R-ASA-1123150 AVESA.00001b.r3.7Ag0002587 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.7Ag0002606 R-ASA-1129867-3 AVESA.00001b.r3.7Ag0002606 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0002617 R-ASA-1122605-3 AVESA.00001b.r3.7Ag0002617 [cytosol] R-ASA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119341 Galactosylcyclitol biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0002630 R-ASA-1127743 AVESA.00001b.r3.7Ag0002630 [cytosol] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0002630 R-ASA-9681930 AVESA.00001b.r3.7Ag0002630 [Golgi membrane] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.7Ag0002630 R-ASA-1127743 AVESA.00001b.r3.7Ag0002630 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.7Ag0002654 R-ASA-1122785 AVESA.00001b.r3.7Ag0002654 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.7Ag0002654 R-ASA-1122785 AVESA.00001b.r3.7Ag0002654 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.7Ag0002654 R-ASA-1122785 AVESA.00001b.r3.7Ag0002654 [cytosol] R-ASA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119570 Cytosolic glycolysis none Avena sativa AVESA.00001b.r3.7Ag0002660 R-ASA-1129078 AVESA.00001b.r3.7Ag0002660 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0002663 R-ASA-1122601 AVESA.00001b.r3.7Ag0002663 [mitochondrial inner membrane] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.7Ag0002718 R-ASA-5608123-2 AVESA.00001b.r3.7Ag0002718 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.7Ag0002737 R-ASA-8934208-2 AVESA.00001b.r3.7Ag0002737 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.7Ag0002804 R-ASA-9918159-3 AVESA.00001b.r3.7Ag0002804 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0002810 R-ASA-1122403-3 AVESA.00001b.r3.7Ag0002810 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0002821 R-ASA-1129547-2 AVESA.00001b.r3.7Ag0002821 [cytosol] R-ASA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119400 Methionine biosynthesis II none Avena sativa AVESA.00001b.r3.7Ag0002843 R-ASA-1124613 AVESA.00001b.r3.7Ag0002843 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0002845 R-ASA-5608120 AVESA.00001b.r3.7Ag0002845 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.7Ag0002855 R-ASA-1127382-2 AVESA.00001b.r3.7Ag0002855 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.7Ag0002855 R-ASA-1127382-2 AVESA.00001b.r3.7Ag0002855 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0002856 R-ASA-1129723-2 AVESA.00001b.r3.7Ag0002856 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0002872 R-ASA-5654827-4 AVESA.00001b.r3.7Ag0002872 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.7Ag0002903 R-ASA-1123059-3 AVESA.00001b.r3.7Ag0002903 [cytosol] R-ASA-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119317 Spermine biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0002903 R-ASA-1123059-3 AVESA.00001b.r3.7Ag0002903 [cytosol] R-ASA-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119343 Spermidine biosynthesis none Avena sativa AVESA.00001b.r3.7Ag0002926 R-ASA-1128914 AVESA.00001b.r3.7Ag0002926 [cytosol] R-ASA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119281 Aspartate biosynthesis I none Avena sativa AVESA.00001b.r3.7Ag0002956 R-ASA-1127523-2 AVESA.00001b.r3.7Ag0002956 [cytosol] R-ASA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Avena sativa AVESA.00001b.r3.7Cg0000112 R-ASA-1126714 AVESA.00001b.r3.7Cg0000112 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.7Cg0000112 R-ASA-1126714 AVESA.00001b.r3.7Cg0000112 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.7Cg0000112 R-ASA-1126714 AVESA.00001b.r3.7Cg0000112 [cytosol] R-ASA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119295 Homoserine biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0000112 R-ASA-5606484 AVESA.00001b.r3.7Cg0000112 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.7Cg0000140 R-ASA-5632129 AVESA.00001b.r3.7Cg0000140 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.7Cg0000192 R-ASA-9626474-2 AVESA.00001b.r3.7Cg0000192 [trans-Golgi network membrane] R-ASA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9626305 Regulatory network of nutrient accumulation none Avena sativa AVESA.00001b.r3.7Cg0000219 R-ASA-1129507-2 AVESA.00001b.r3.7Cg0000219 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.7Cg0000260 R-ASA-9639016 AVESA.00001b.r3.7Cg0000260 [cytosol] R-ASA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119410 Ascorbate biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0000260 R-ASA-9639016 AVESA.00001b.r3.7Cg0000260 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.7Cg0000270 R-ASA-1128656 AVESA.00001b.r3.7Cg0000270 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0000283 R-ASA-8986695-3 AVESA.00001b.r3.7Cg0000283 [endoplasmic reticulum membrane] R-ASA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8986768 Anther and pollen development none Avena sativa AVESA.00001b.r3.7Cg0000287 R-ASA-1123751 AVESA.00001b.r3.7Cg0000287 [cytosol] R-ASA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119292 Cytokinins 7-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0000287 R-ASA-1123751 AVESA.00001b.r3.7Cg0000287 [cytosol] R-ASA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119375 Cytokinins 9-N-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0000287 R-ASA-1123751 AVESA.00001b.r3.7Cg0000287 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0000343 R-ASA-9608682 AVESA.00001b.r3.7Cg0000343 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.7Cg0000343 R-ASA-9608682 AVESA.00001b.r3.7Cg0000343 [nucleoplasm] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.7Cg0000343 R-ASA-9608606 AVESA.00001b.r3.7Cg0000343 [cytosol] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.7Cg0000388 R-ASA-1250417-3 AVESA.00001b.r3.7Cg0000388 [cytosol] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0000412 R-ASA-1122861-2 AVESA.00001b.r3.7Cg0000412 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0000427 R-ASA-1130084-3 AVESA.00001b.r3.7Cg0000427 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.7Cg0000449 R-ASA-5632241 AVESA.00001b.r3.7Cg0000449 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.7Cg0000452 R-ASA-1128553 AVESA.00001b.r3.7Cg0000452 [cytosol] R-ASA-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Avena sativa AVESA.00001b.r3.7Cg0000452 R-ASA-1128553 AVESA.00001b.r3.7Cg0000452 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0000452 R-ASA-1128553 AVESA.00001b.r3.7Cg0000452 [cytosol] R-ASA-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119439 Cholesterol biosynthesis III (via desmosterol) none Avena sativa AVESA.00001b.r3.7Cg0000452 R-ASA-1128553 AVESA.00001b.r3.7Cg0000452 [cytosol] R-ASA-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119559 Cholesterol biosynthesis I none Avena sativa AVESA.00001b.r3.7Cg0000506 R-ASA-1128191-2 AVESA.00001b.r3.7Cg0000506 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0000514 R-ASA-2685738 AVESA.00001b.r3.7Cg0000514 [cytosol] R-ASA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119580 IAA biosynthesis II none Avena sativa AVESA.00001b.r3.7Cg0000549 R-ASA-9675838-3 AVESA.00001b.r3.7Cg0000549 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.7Cg0000554 R-ASA-1250418-5 AVESA.00001b.r3.7Cg0000554 [cytosol] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0000554 R-ASA-1129305-5 AVESA.00001b.r3.7Cg0000554 [cytosol] R-ASA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119486 IAA biosynthesis I none Avena sativa AVESA.00001b.r3.7Cg0000571 R-ASA-1124984-2 AVESA.00001b.r3.7Cg0000571 [cytosol] R-ASA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119596 Glutamate biosynthesis I none Avena sativa AVESA.00001b.r3.7Cg0000592 R-ASA-5632110-2 AVESA.00001b.r3.7Cg0000592 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.7Cg0000592 R-ASA-5632110-2 AVESA.00001b.r3.7Cg0000592 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.7Cg0000598 R-ASA-1124484 AVESA.00001b.r3.7Cg0000598 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.7Cg0000603 R-ASA-1123404 AVESA.00001b.r3.7Cg0000603 [peroxisomal matrix] R-ASA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119407 Ureide biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0000631 R-ASA-1124935-4 AVESA.00001b.r3.7Cg0000631 [cytosol] R-ASA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119349 S-methylmethionine cycle none Avena sativa AVESA.00001b.r3.7Cg0000693 R-ASA-8933816-2 AVESA.00001b.r3.7Cg0000693 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.7Cg0000711 R-ASA-1125504-3 AVESA.00001b.r3.7Cg0000711 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.7Cg0000711 R-ASA-1125504-3 AVESA.00001b.r3.7Cg0000711 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.7Cg0000711 R-ASA-1125504-3 AVESA.00001b.r3.7Cg0000711 [cytosol] R-ASA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119295 Homoserine biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0000711 R-ASA-5606489-3 AVESA.00001b.r3.7Cg0000711 [plastid stroma] R-ASA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119419 Lysine biosynthesis VI none Avena sativa AVESA.00001b.r3.7Cg0000717 R-ASA-9640694 AVESA.00001b.r3.7Cg0000717 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.7Cg0000717 R-ASA-9640694 AVESA.00001b.r3.7Cg0000717 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.7Cg0000729 R-ASA-1125460-5 AVESA.00001b.r3.7Cg0000729 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.7Cg0000729 R-ASA-1125460-5 AVESA.00001b.r3.7Cg0000729 [cytosol] R-ASA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119563 UDP-D-xylose biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0000729 R-ASA-1125460-5 AVESA.00001b.r3.7Cg0000729 [cytosol] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.7Cg0000744 R-ASA-9639171-2 AVESA.00001b.r3.7Cg0000744 [plant-type vacuole membrane] R-ASA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639136 Response to Aluminum stress none Avena sativa AVESA.00001b.r3.7Cg0000751 R-ASA-8934009-3 AVESA.00001b.r3.7Cg0000751 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.7Cg0000751 R-ASA-8934009-3 AVESA.00001b.r3.7Cg0000751 [nucleoplasm] R-ASA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934257 Transition from vegetative to reproductive shoot apical meristem none Avena sativa AVESA.00001b.r3.7Cg0000751 R-ASA-8934009-3 AVESA.00001b.r3.7Cg0000751 [nucleoplasm] R-ASA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609102 Flower development none Avena sativa AVESA.00001b.r3.7Cg0000764 R-ASA-1126604-2 AVESA.00001b.r3.7Cg0000764 [cytosol] R-ASA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119438 Secologanin and strictosidine biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0000839 R-ASA-8987575 AVESA.00001b.r3.7Cg0000839 [mitochondrial matrix] R-ASA-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119311 Glycine biosynthesis I none Avena sativa AVESA.00001b.r3.7Cg0000848 R-ASA-9640783-2 AVESA.00001b.r3.7Cg0000848 [nucleoplasm] R-ASA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640760 G1 phase none Avena sativa AVESA.00001b.r3.7Cg0000851 R-ASA-1125341-2 AVESA.00001b.r3.7Cg0000851 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.7Cg0000851 R-ASA-1125341-2 AVESA.00001b.r3.7Cg0000851 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0000867 R-ASA-1122398-3 AVESA.00001b.r3.7Cg0000867 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0000868 R-ASA-6786984 AVESA.00001b.r3.7Cg0000868 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.7Cg0000868 R-ASA-6787051 AVESA.00001b.r3.7Cg0000868 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.7Cg0000876 R-ASA-9035785-2 AVESA.00001b.r3.7Cg0000876 [nucleoplasm] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.7Cg0000883 R-ASA-1128745 AVESA.00001b.r3.7Cg0000883 [plastid stroma] R-ASA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119464 Methylerythritol phosphate pathway none Avena sativa AVESA.00001b.r3.7Cg0000897 R-ASA-9035593-2 AVESA.00001b.r3.7Cg0000897 [cytosol] R-ASA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9035605 Regulation of seed size none Avena sativa AVESA.00001b.r3.7Cg0000897 R-ASA-9035634-2 AVESA.00001b.r3.7Cg0000897 [nucleoplasm] R-ASA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9035605 Regulation of seed size none Avena sativa AVESA.00001b.r3.7Cg0000897 R-ASA-9035593-2 AVESA.00001b.r3.7Cg0000897 [cytosol] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.7Cg0000897 R-ASA-9035634-2 AVESA.00001b.r3.7Cg0000897 [nucleoplasm] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.7Cg0000910 R-ASA-1123895-2 AVESA.00001b.r3.7Cg0000910 [cytosol] R-ASA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119334 Ethylene biosynthesis from methionine none Avena sativa AVESA.00001b.r3.7Cg0000910 R-ASA-1123895-2 AVESA.00001b.r3.7Cg0000910 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.7Cg0000911 R-ASA-9631619-2 AVESA.00001b.r3.7Cg0000911 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.7Cg0000919 R-ASA-9639012 AVESA.00001b.r3.7Cg0000919 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.7Cg0000924 R-ASA-9640886-2 AVESA.00001b.r3.7Cg0000924 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.7Cg0000924 R-ASA-9640886-2 AVESA.00001b.r3.7Cg0000924 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.7Cg0000956 R-ASA-8933842-2 AVESA.00001b.r3.7Cg0000956 [cytosol] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.7Cg0000956 R-ASA-8933843-2 AVESA.00001b.r3.7Cg0000956 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.7Cg0000968 R-ASA-1125460-6 AVESA.00001b.r3.7Cg0000968 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.7Cg0000968 R-ASA-1125460-6 AVESA.00001b.r3.7Cg0000968 [cytosol] R-ASA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119563 UDP-D-xylose biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0000968 R-ASA-1125460-6 AVESA.00001b.r3.7Cg0000968 [cytosol] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.7Cg0000981 R-ASA-1127031-3 AVESA.00001b.r3.7Cg0000981 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.7Cg0000985 R-ASA-1128632-2 AVESA.00001b.r3.7Cg0000985 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0000985 R-ASA-1128632-2 AVESA.00001b.r3.7Cg0000985 [cytosol] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0000999 R-ASA-5632316-2 AVESA.00001b.r3.7Cg0000999 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.7Cg0001018 R-ASA-1126513-2 AVESA.00001b.r3.7Cg0001018 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0001021 R-ASA-5679455-2 AVESA.00001b.r3.7Cg0001021 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.7Cg0001021 R-ASA-6787020-2 AVESA.00001b.r3.7Cg0001021 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.7Cg0001039 R-ASA-1124285-2 AVESA.00001b.r3.7Cg0001039 [cytosol] R-ASA-1119284 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119284 Coumarin biosynthesis (via 2-coumarate) none Avena sativa AVESA.00001b.r3.7Cg0001040 R-ASA-1124285-7 AVESA.00001b.r3.7Cg0001040 [cytosol] R-ASA-1119284 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119284 Coumarin biosynthesis (via 2-coumarate) none Avena sativa AVESA.00001b.r3.7Cg0001043 R-ASA-1124285 AVESA.00001b.r3.7Cg0001043 [cytosol] R-ASA-1119284 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119284 Coumarin biosynthesis (via 2-coumarate) none Avena sativa AVESA.00001b.r3.7Cg0001141 R-ASA-6787127 AVESA.00001b.r3.7Cg0001141 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.7Cg0001141 R-ASA-6787052 AVESA.00001b.r3.7Cg0001141 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.7Cg0001199 R-ASA-9025728-2 AVESA.00001b.r3.7Cg0001199 [plasma membrane] R-ASA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025727 Iron uptake and transport in root vascular system none Avena sativa AVESA.00001b.r3.7Cg0001200 R-ASA-6788149-2 AVESA.00001b.r3.7Cg0001200 [cytosol] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.7Cg0001282 R-ASA-5221144 AVESA.00001b.r3.7Cg0001282 [plastid] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0001286 R-ASA-5631953 AVESA.00001b.r3.7Cg0001286 [mitochondrial matrix] R-ASA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119289 Arginine degradation none Avena sativa AVESA.00001b.r3.7Cg0001286 R-ASA-1124214 AVESA.00001b.r3.7Cg0001286 [cytosol] R-ASA-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119318 Proline biosynthesis V (from arginine) none Avena sativa AVESA.00001b.r3.7Cg0001286 R-ASA-1124214 AVESA.00001b.r3.7Cg0001286 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.7Cg0001365 R-ASA-5138500 AVESA.00001b.r3.7Cg0001365 [plastid stroma] R-ASA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119263 Arginine biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0001365 R-ASA-1129397 AVESA.00001b.r3.7Cg0001365 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.7Cg0001365 R-ASA-1129397 AVESA.00001b.r3.7Cg0001365 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.7Cg0001365 R-ASA-1129397 AVESA.00001b.r3.7Cg0001365 [cytosol] R-ASA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119295 Homoserine biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0001365 R-ASA-5138500 AVESA.00001b.r3.7Cg0001365 [plastid stroma] R-ASA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119539 Ornithine biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0001365 R-ASA-5138500 AVESA.00001b.r3.7Cg0001365 [plastid stroma] R-ASA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119622 Arginine biosynthesis II (acetyl cycle) none Avena sativa AVESA.00001b.r3.7Cg0001368 R-ASA-1126436-2 AVESA.00001b.r3.7Cg0001368 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.7Cg0001374 R-ASA-4415055-2 AVESA.00001b.r3.7Cg0001374 [cytosol] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.7Cg0001374 R-ASA-4415073-2 phospho-AVESA.00001b.r3.7Cg0001374 [cytosol] R-ASA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-3899351 Abscisic acid (ABA) mediated signaling none Avena sativa AVESA.00001b.r3.7Cg0001374 R-ASA-4415055-2 AVESA.00001b.r3.7Cg0001374 [cytosol] R-ASA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639861 Development of root hair none Avena sativa AVESA.00001b.r3.7Cg0001462 R-ASA-1127455 AVESA.00001b.r3.7Cg0001462 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.7Cg0001462 R-ASA-1127455 AVESA.00001b.r3.7Cg0001462 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0001466 R-ASA-1125182 AVESA.00001b.r3.7Cg0001466 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0001540 R-ASA-1125307 AVESA.00001b.r3.7Cg0001540 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.7Cg0001546 R-ASA-5084918-3 AVESA.00001b.r3.7Cg0001546 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.7Cg0001560 R-ASA-1122242-6 AVESA.00001b.r3.7Cg0001560 [cytosol] R-ASA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119267 Phenylalanine degradation III none Avena sativa AVESA.00001b.r3.7Cg0001611 R-ASA-6788234-3 AVESA.00001b.r3.7Cg0001611 [cytosol] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.7Cg0001611 R-ASA-1124041-3 AVESA.00001b.r3.7Cg0001611 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.7Cg0001621 R-ASA-9675807 AVESA.00001b.r3.7Cg0001621 [nucleoplasm] R-ASA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675782 Maturation none Avena sativa AVESA.00001b.r3.7Cg0001621 R-ASA-9675807 AVESA.00001b.r3.7Cg0001621 [nucleoplasm] R-ASA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675815 Leading strand synthesis none Avena sativa AVESA.00001b.r3.7Cg0001621 R-ASA-9675807 AVESA.00001b.r3.7Cg0001621 [nucleoplasm] R-ASA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675885 Lagging strand synthesis none Avena sativa AVESA.00001b.r3.7Cg0001731 R-ASA-9681886 AVESA.00001b.r3.7Cg0001731 [cytosol] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.7Cg0001806 R-ASA-9645907 AVESA.00001b.r3.7Cg0001806 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.7Cg0001806 R-ASA-9645907 AVESA.00001b.r3.7Cg0001806 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.7Cg0001819 R-ASA-1126593-3 AVESA.00001b.r3.7Cg0001819 [endosome] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.7Cg0001819 R-ASA-5679293-3 AVESA.00001b.r3.7Cg0001819 [plasma membrane] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.7Cg0001819 R-ASA-8858098-3 AVESA.00001b.r3.7Cg0001819 [plasma membrane] R-ASA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8858053 Polar auxin transport none Avena sativa AVESA.00001b.r3.7Cg0001823 R-ASA-9025698-2 AVESA.00001b.r3.7Cg0001823 [plasma membrane] R-ASA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025727 Iron uptake and transport in root vascular system none Avena sativa AVESA.00001b.r3.7Cg0001858 R-ASA-6788085 AVESA.00001b.r3.7Cg0001858 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.7Cg0001862 R-ASA-5654797-2 AVESA.00001b.r3.7Cg0001862 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.7Cg0001907 R-ASA-1127539-2 AVESA.00001b.r3.7Cg0001907 [cytosol] R-ASA-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Avena sativa AVESA.00001b.r3.7Cg0001907 R-ASA-1127539-2 AVESA.00001b.r3.7Cg0001907 [cytosol] R-ASA-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119439 Cholesterol biosynthesis III (via desmosterol) none Avena sativa AVESA.00001b.r3.7Cg0001907 R-ASA-1127539-2 AVESA.00001b.r3.7Cg0001907 [cytosol] R-ASA-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119559 Cholesterol biosynthesis I none Avena sativa AVESA.00001b.r3.7Cg0002028 R-ASA-9026139-2 AVESA.00001b.r3.7Cg0002028 [mitochondrion] R-ASA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119458 Glutamate degradation none Avena sativa AVESA.00001b.r3.7Cg0002028 R-ASA-1130288-2 AVESA.00001b.r3.7Cg0002028 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.7Cg0002078 R-ASA-9918268 soluble Starch Synthase (SSIIIA/SSIII-2) [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0002081 R-ASA-1129160-2 AVESA.00001b.r3.7Cg0002081 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.7Cg0002081 R-ASA-1129160-2 AVESA.00001b.r3.7Cg0002081 [mitochondrial matrix] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0002094 R-ASA-9918175 AVESA.00001b.r3.7Cg0002094 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0002312 R-ASA-1122818 AVESA.00001b.r3.7Cg0002312 [cytosol] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0002333 R-ASA-1124048-3 AVESA.00001b.r3.7Cg0002333 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.7Cg0002455 R-ASA-9675426 AVESA.00001b.r3.7Cg0002455 [nucleoplasm] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.7Cg0002460 R-ASA-1129781 AVESA.00001b.r3.7Cg0002460 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0002487 R-ASA-9609608 AVESA.00001b.r3.7Cg0002487 [cytosol] R-ASA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609573 Tricin biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0002487 R-ASA-9916171 OsOMT [cytosol] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.7Cg0002487 R-ASA-9916312 OsOMT [nucleoplasm] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.7Cg0002489 R-ASA-8933759 AVESA.00001b.r3.7Cg0002489 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.7Cg0002495 R-ASA-6788261-3 AVESA.00001b.r3.7Cg0002495 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.7Cg0002518 R-ASA-5632174-3 AVESA.00001b.r3.7Cg0002518 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.7Cg0002518 R-ASA-5632174-3 AVESA.00001b.r3.7Cg0002518 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.7Cg0002518 R-ASA-5632174-3 AVESA.00001b.r3.7Cg0002518 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.7Cg0002518 R-ASA-5632174-3 AVESA.00001b.r3.7Cg0002518 [nucleoplasm] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.7Cg0002563 R-ASA-6787934-3 AVESA.00001b.r3.7Cg0002563 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.7Cg0002693 R-ASA-1129514-2 AVESA.00001b.r3.7Cg0002693 [chloroplast] R-ASA-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119579 Glycine betaine biosynthesis III none Avena sativa AVESA.00001b.r3.7Cg0002719 R-ASA-9675280 AVESA.00001b.r3.7Cg0002719 [nucleoplasm] R-ASA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030680 Crown root development none Avena sativa AVESA.00001b.r3.7Cg0002738 R-ASA-6787007 AVESA.00001b.r3.7Cg0002738 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.7Cg0002738 R-ASA-6787147 AVESA.00001b.r3.7Cg0002738 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.7Cg0002738 R-ASA-9826596 OSJAZ3 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.7Cg0002752 R-ASA-5632179-2 AVESA.00001b.r3.7Cg0002752 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.7Cg0002752 R-ASA-5632179-2 AVESA.00001b.r3.7Cg0002752 [cytosol] R-ASA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934257 Transition from vegetative to reproductive shoot apical meristem none Avena sativa AVESA.00001b.r3.7Cg0002752 R-ASA-9927894-2 AVESA.00001b.r3.7Cg0002752 [nucleoplasm] R-ASA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934257 Transition from vegetative to reproductive shoot apical meristem none Avena sativa AVESA.00001b.r3.7Cg0002752 R-ASA-5632179-2 AVESA.00001b.r3.7Cg0002752 [cytosol] R-ASA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609102 Flower development none Avena sativa AVESA.00001b.r3.7Cg0002752 R-ASA-5632179-2 AVESA.00001b.r3.7Cg0002752 [cytosol] R-ASA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928831 Severe drought none Avena sativa AVESA.00001b.r3.7Cg0002752 R-ASA-9927894-2 AVESA.00001b.r3.7Cg0002752 [nucleoplasm] R-ASA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928831 Severe drought none Avena sativa AVESA.00001b.r3.7Cg0002757 R-ASA-1127254-2 AVESA.00001b.r3.7Cg0002757 [cytosol] R-ASA-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119317 Spermine biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0002757 R-ASA-1127254-2 AVESA.00001b.r3.7Cg0002757 [cytosol] R-ASA-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119343 Spermidine biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0002839 R-ASA-9658563-6 AVESA.00001b.r3.7Cg0002839 [endoplasmic reticulum lumen] R-ASA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119502 Allantoin degradation none Avena sativa AVESA.00001b.r3.7Cg0002841 R-ASA-9658563-2 AVESA.00001b.r3.7Cg0002841 [endoplasmic reticulum lumen] R-ASA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119502 Allantoin degradation none Avena sativa AVESA.00001b.r3.7Cg0002843 R-ASA-9658563-5 AVESA.00001b.r3.7Cg0002843 [endoplasmic reticulum lumen] R-ASA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119502 Allantoin degradation none Avena sativa AVESA.00001b.r3.7Cg0002845 R-ASA-9658563 AVESA.00001b.r3.7Cg0002845 [endoplasmic reticulum lumen] R-ASA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119502 Allantoin degradation none Avena sativa AVESA.00001b.r3.7Cg0002854 R-ASA-1125540 AVESA.00001b.r3.7Cg0002854 [cytosol] R-ASA-1119303 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119303 Pyridoxamine anabolism none Avena sativa AVESA.00001b.r3.7Cg0002854 R-ASA-1125540 AVESA.00001b.r3.7Cg0002854 [cytosol] R-ASA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119534 Pyridoxal 5'-phosphate salvage pathway none Avena sativa AVESA.00001b.r3.7Cg0002863 R-ASA-1129784 AVESA.00001b.r3.7Cg0002863 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.7Cg0002905 R-ASA-1127274 AVESA.00001b.r3.7Cg0002905 [cytosol] R-ASA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119612 Cysteine degradation none Avena sativa AVESA.00001b.r3.7Cg0002919 R-ASA-5632280 AVESA.00001b.r3.7Cg0002919 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.7Cg0002919 R-ASA-5632280 AVESA.00001b.r3.7Cg0002919 [nucleoplasm] R-ASA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5679411 Gibberellin signaling none Avena sativa AVESA.00001b.r3.7Cg0002967 R-ASA-1124232-3 AVESA.00001b.r3.7Cg0002967 [cytosol] R-ASA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119341 Galactosylcyclitol biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0002993 R-ASA-5632111-2 AVESA.00001b.r3.7Cg0002993 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.7Cg0002993 R-ASA-5632216-2 phospho-AVESA.00001b.r3.7Cg0002993 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.7Cg0002995 R-ASA-5221146 AVESA.00001b.r3.7Cg0002995 [plastid] R-ASA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119374 Abscisic acid biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0003000 R-ASA-9826669-3 OsYABBY6 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.7Cg0003006 R-ASA-1125151-2 AVESA.00001b.r3.7Cg0003006 [cytosol] R-ASA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119400 Methionine biosynthesis II none Avena sativa AVESA.00001b.r3.7Cg0003006 R-ASA-1125151-2 AVESA.00001b.r3.7Cg0003006 [cytosol] R-ASA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119501 S-adenosyl-L-methionine cycle none Avena sativa AVESA.00001b.r3.7Cg0003014 R-ASA-1122632-3 AVESA.00001b.r3.7Cg0003014 [cytosol] R-ASA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119331 Cysteine biosynthesis I none Avena sativa AVESA.00001b.r3.7Cg0003052 R-ASA-8858194-3 AVESA.00001b.r3.7Cg0003052 [cytosol] R-ASA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119556 Choline biosynthesis I none Avena sativa AVESA.00001b.r3.7Cg0003055 R-ASA-8858194-2 AVESA.00001b.r3.7Cg0003055 [cytosol] R-ASA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119556 Choline biosynthesis I none Avena sativa AVESA.00001b.r3.7Cg0003062 R-ASA-1124490 AVESA.00001b.r3.7Cg0003062 [cytosol] R-ASA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119534 Pyridoxal 5'-phosphate salvage pathway none Avena sativa AVESA.00001b.r3.7Cg0003062 R-ASA-1124490 AVESA.00001b.r3.7Cg0003062 [cytosol] R-ASA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119594 Pyridoxal 5'-phosphate biosynthesis none Avena sativa AVESA.00001b.r3.7Cg0003072 R-ASA-1124969-4 AVESA.00001b.r3.7Cg0003072 [cytosol] R-ASA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119265 Tetrahydrofolate biosynthesis I none Avena sativa AVESA.00001b.r3.7Cg0003072 R-ASA-1124969-4 AVESA.00001b.r3.7Cg0003072 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.7Cg0003092 R-ASA-9626337-3 AVESA.00001b.r3.7Cg0003092 [Golgi-associated vesicle] R-ASA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9626305 Regulatory network of nutrient accumulation none Avena sativa AVESA.00001b.r3.7Dg0000032 R-ASA-1124377 AVESA.00001b.r3.7Dg0000032 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.7Dg0000032 R-ASA-1124377 AVESA.00001b.r3.7Dg0000032 [cytosol] R-ASA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119465 Sucrose biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0000044 R-ASA-5608125 AVESA.00001b.r3.7Dg0000044 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.7Dg0000077 R-ASA-9611524-2 LYP6 [plasma membrane] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.7Dg0000091 R-ASA-5655095-3 AVESA.00001b.r3.7Dg0000091 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0000092 R-ASA-5655100-3 AVESA.00001b.r3.7Dg0000092 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0000093 R-ASA-5655095-5 AVESA.00001b.r3.7Dg0000093 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0000094 R-ASA-5655090 AVESA.00001b.r3.7Dg0000094 [Golgi lumen] R-ASA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5655101 Xyloglucan biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0000168 R-ASA-9618126-3 AVESA.00001b.r3.7Dg0000168 [plasma membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.7Dg0000188 R-ASA-1124759-3 AVESA.00001b.r3.7Dg0000188 [endosome] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.7Dg0000188 R-ASA-5679306-3 AVESA.00001b.r3.7Dg0000188 [plasma membrane] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.7Dg0000267 R-ASA-1123867-3 AVESA.00001b.r3.7Dg0000267 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0000269 R-ASA-5149644-2 AVESA.00001b.r3.7Dg0000269 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.7Dg0000278 R-ASA-9826604-2 AVESA.00001b.r3.7Dg0000278 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.7Dg0000377 R-ASA-1130152-2 AVESA.00001b.r3.7Dg0000377 [cytosol] R-ASA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119394 Pantothenate and coenzyme A biosynthesis III none Avena sativa AVESA.00001b.r3.7Dg0000457 R-ASA-5654755-2 AVESA.00001b.r3.7Dg0000457 [cytosol] R-ASA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119393 Asparagine degradation I none Avena sativa AVESA.00001b.r3.7Dg0000486 R-ASA-8987571-3 AVESA.00001b.r3.7Dg0000486 [peroxisomal matrix] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.7Dg0000508 R-ASA-6786987 AVESA.00001b.r3.7Dg0000508 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.7Dg0000509 R-ASA-1126107-2 AVESA.00001b.r3.7Dg0000509 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0000509 R-ASA-1126107-2 AVESA.00001b.r3.7Dg0000509 [cytosol] R-ASA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119618 13-LOX and 13-HPL pathway none Avena sativa AVESA.00001b.r3.7Dg0000525 R-ASA-1124496 AVESA.00001b.r3.7Dg0000525 [cytosol] R-ASA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119615 Mevalonate pathway none Avena sativa AVESA.00001b.r3.7Dg0000528 R-ASA-1128511-2 AVESA.00001b.r3.7Dg0000528 [cytosol] R-ASA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119506 tyrosine degradation I none Avena sativa AVESA.00001b.r3.7Dg0000601 R-ASA-1127414-4 AVESA.00001b.r3.7Dg0000601 [cytosol] R-ASA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119265 Tetrahydrofolate biosynthesis I none Avena sativa AVESA.00001b.r3.7Dg0000609 R-ASA-1124056-2 AVESA.00001b.r3.7Dg0000609 [cytosol] R-ASA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119394 Pantothenate and coenzyme A biosynthesis III none Avena sativa AVESA.00001b.r3.7Dg0000618 R-ASA-4827081-3 AVESA.00001b.r3.7Dg0000618 [plastid stroma] R-ASA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-4827054 Tetrapyrrole biosynthesis I none Avena sativa AVESA.00001b.r3.7Dg0000642 R-ASA-9611549-2 phospho-phosphorylated-CERK1 [plasma membrane] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.7Dg0000642 R-ASA-9611466-2 CERK1 [plasma membrane] R-ASA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Avena sativa AVESA.00001b.r3.7Dg0000644 R-ASA-9640763-3 AVESA.00001b.r3.7Dg0000644 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.7Dg0000644 R-ASA-9640885-3 phospho-AVESA.00001b.r3.7Dg0000644 [nucleoplasm] R-ASA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640887 G1/S transition none Avena sativa AVESA.00001b.r3.7Dg0000662 R-ASA-1124791 AVESA.00001b.r3.7Dg0000662 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.7Dg0000717 R-ASA-1123786-2 AVESA.00001b.r3.7Dg0000717 R-ASA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119403 Removal of superoxide radicals none Avena sativa AVESA.00001b.r3.7Dg0000752 R-ASA-1126828 AVESA.00001b.r3.7Dg0000752 [plastid] R-ASA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119403 Removal of superoxide radicals none Avena sativa AVESA.00001b.r3.7Dg0000755 R-ASA-8868961-3 AVESA.00001b.r3.7Dg0000755 [plant-type vacuole membrane] R-ASA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8868949 Intracellular auxin transport none Avena sativa AVESA.00001b.r3.7Dg0000764 R-ASA-1127733-2 AVESA.00001b.r3.7Dg0000764 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.7Dg0000764 R-ASA-1127733-2 AVESA.00001b.r3.7Dg0000764 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0000797 R-ASA-1127625-2 AVESA.00001b.r3.7Dg0000797 [cytosol] R-ASA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119265 Tetrahydrofolate biosynthesis I none Avena sativa AVESA.00001b.r3.7Dg0000797 R-ASA-1127625-2 AVESA.00001b.r3.7Dg0000797 [cytosol] R-ASA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119523 Tetrahydrofolate biosynthesis II none Avena sativa AVESA.00001b.r3.7Dg0000800 R-ASA-1127357-3 AVESA.00001b.r3.7Dg0000800 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.7Dg0000800 R-ASA-1127357-3 AVESA.00001b.r3.7Dg0000800 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.7Dg0000862 R-ASA-5632192-2 AVESA.00001b.r3.7Dg0000862 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.7Dg0000905 R-ASA-1122836-2 AVESA.00001b.r3.7Dg0000905 [cytosol] R-ASA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119586 Cyanate degradation none Avena sativa AVESA.00001b.r3.7Dg0000907 R-ASA-1127880-3 AVESA.00001b.r3.7Dg0000907 [cytosol] R-ASA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119291 Nitrate assimilation none Avena sativa AVESA.00001b.r3.7Dg0000914 R-ASA-9645866-2 AVESA.00001b.r3.7Dg0000914 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.7Dg0000914 R-ASA-9645866-2 AVESA.00001b.r3.7Dg0000914 [nucleoplasm] R-ASA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675824 DNA replication Initiation none Avena sativa AVESA.00001b.r3.7Dg0000915 R-ASA-1122843 AVESA.00001b.r3.7Dg0000915 [cytosol] R-ASA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119458 Glutamate degradation none Avena sativa AVESA.00001b.r3.7Dg0000929 R-ASA-1130153 AVESA.00001b.r3.7Dg0000929 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0000929 R-ASA-6787115 AVESA.00001b.r3.7Dg0000929 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.7Dg0000961 R-ASA-1128200-3 AVESA.00001b.r3.7Dg0000961 [cytosol] R-ASA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119316 Phenylpropanoid biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0000965 R-ASA-1123148-2 AVESA.00001b.r3.7Dg0000965 [cytosol] R-ASA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119300 Glycolipid desaturation none Avena sativa AVESA.00001b.r3.7Dg0001012 R-ASA-1127254 AVESA.00001b.r3.7Dg0001012 [cytosol] R-ASA-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119317 Spermine biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0001012 R-ASA-1127254 AVESA.00001b.r3.7Dg0001012 [cytosol] R-ASA-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119343 Spermidine biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0001013 R-ASA-5632179-3 AVESA.00001b.r3.7Dg0001013 [cytosol] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.7Dg0001013 R-ASA-5632179-3 AVESA.00001b.r3.7Dg0001013 [cytosol] R-ASA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934257 Transition from vegetative to reproductive shoot apical meristem none Avena sativa AVESA.00001b.r3.7Dg0001013 R-ASA-9927894-3 AVESA.00001b.r3.7Dg0001013 [nucleoplasm] R-ASA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934257 Transition from vegetative to reproductive shoot apical meristem none Avena sativa AVESA.00001b.r3.7Dg0001013 R-ASA-5632179-3 AVESA.00001b.r3.7Dg0001013 [cytosol] R-ASA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609102 Flower development none Avena sativa AVESA.00001b.r3.7Dg0001013 R-ASA-5632179-3 AVESA.00001b.r3.7Dg0001013 [cytosol] R-ASA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928831 Severe drought none Avena sativa AVESA.00001b.r3.7Dg0001013 R-ASA-9927894-3 AVESA.00001b.r3.7Dg0001013 [nucleoplasm] R-ASA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928831 Severe drought none Avena sativa AVESA.00001b.r3.7Dg0001024 R-ASA-9675280-2 AVESA.00001b.r3.7Dg0001024 [nucleoplasm] R-ASA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030680 Crown root development none Avena sativa AVESA.00001b.r3.7Dg0001035 R-ASA-6787007-3 AVESA.00001b.r3.7Dg0001035 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.7Dg0001035 R-ASA-6787147-3 AVESA.00001b.r3.7Dg0001035 [cytosol] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.7Dg0001035 R-ASA-9826596-3 OSJAZ3 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.7Dg0001042 R-ASA-1129514 AVESA.00001b.r3.7Dg0001042 [chloroplast] R-ASA-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119579 Glycine betaine biosynthesis III none Avena sativa AVESA.00001b.r3.7Dg0001149 R-ASA-1126715-2 AVESA.00001b.r3.7Dg0001149 [cytosol] R-ASA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119452 Galactose degradation II none Avena sativa AVESA.00001b.r3.7Dg0001205 R-ASA-1122818-3 AVESA.00001b.r3.7Dg0001205 [cytosol] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0001313 R-ASA-1124048 AVESA.00001b.r3.7Dg0001313 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.7Dg0001364 R-ASA-9684723-3 AVESA.00001b.r3.7Dg0001364 [cytosol] R-ASA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609102 Flower development none Avena sativa AVESA.00001b.r3.7Dg0001373 R-ASA-1129781-2 AVESA.00001b.r3.7Dg0001373 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0001376 R-ASA-9675426-3 AVESA.00001b.r3.7Dg0001376 [nucleoplasm] R-ASA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9030654 Primary root development none Avena sativa AVESA.00001b.r3.7Dg0001393 R-ASA-9609608-2 AVESA.00001b.r3.7Dg0001393 [cytosol] R-ASA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609573 Tricin biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0001393 R-ASA-9916171-2 OsOMT [cytosol] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.7Dg0001393 R-ASA-9916312-2 OsOMT [nucleoplasm] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.7Dg0001395 R-ASA-8933759-3 AVESA.00001b.r3.7Dg0001395 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.7Dg0001398 R-ASA-6788261-2 AVESA.00001b.r3.7Dg0001398 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.7Dg0001423 R-ASA-5632174-2 AVESA.00001b.r3.7Dg0001423 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.7Dg0001423 R-ASA-5632174-2 AVESA.00001b.r3.7Dg0001423 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.7Dg0001423 R-ASA-5632174-2 AVESA.00001b.r3.7Dg0001423 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.7Dg0001423 R-ASA-5632174-2 AVESA.00001b.r3.7Dg0001423 [nucleoplasm] R-ASA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9608575 Reproductive meristem phase change none Avena sativa AVESA.00001b.r3.7Dg0001453 R-ASA-6787934 AVESA.00001b.r3.7Dg0001453 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.7Dg0001498 R-ASA-9918175-3 AVESA.00001b.r3.7Dg0001498 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0001509 R-ASA-1129160 AVESA.00001b.r3.7Dg0001509 [mitochondrial matrix] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.7Dg0001509 R-ASA-1129160 AVESA.00001b.r3.7Dg0001509 [mitochondrial matrix] R-ASA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119540 Leucine biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0001513 R-ASA-9918268-3 soluble Starch Synthase (SSIIIA/SSIII-2) [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0001539 R-ASA-9026139 AVESA.00001b.r3.7Dg0001539 [mitochondrion] R-ASA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119458 Glutamate degradation none Avena sativa AVESA.00001b.r3.7Dg0001539 R-ASA-1130288 AVESA.00001b.r3.7Dg0001539 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.7Dg0001611 R-ASA-1129867 AVESA.00001b.r3.7Dg0001611 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0001620 R-ASA-1122605 AVESA.00001b.r3.7Dg0001620 [cytosol] R-ASA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119341 Galactosylcyclitol biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0001638 R-ASA-1127743-3 AVESA.00001b.r3.7Dg0001638 [cytosol] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0001638 R-ASA-9681930-3 AVESA.00001b.r3.7Dg0001638 [Golgi membrane] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.7Dg0001638 R-ASA-1127743-3 AVESA.00001b.r3.7Dg0001638 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.7Dg0001650 R-ASA-1129811 AVESA.00001b.r3.7Dg0001650 [mitochondrion] R-ASA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119403 Removal of superoxide radicals none Avena sativa AVESA.00001b.r3.7Dg0001656 R-ASA-1122785-2 AVESA.00001b.r3.7Dg0001656 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.7Dg0001656 R-ASA-1122785-2 AVESA.00001b.r3.7Dg0001656 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.7Dg0001656 R-ASA-1122785-2 AVESA.00001b.r3.7Dg0001656 [cytosol] R-ASA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119570 Cytosolic glycolysis none Avena sativa AVESA.00001b.r3.7Dg0001664 R-ASA-1124088 AVESA.00001b.r3.7Dg0001664 [cytosol] R-ASA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119473 Cytokinins-O-glucoside biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0001666 R-ASA-1122601-2 AVESA.00001b.r3.7Dg0001666 [mitochondrial inner membrane] R-ASA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119533 TCA cycle (plant) none Avena sativa AVESA.00001b.r3.7Dg0001716 R-ASA-5608123 AVESA.00001b.r3.7Dg0001716 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.7Dg0001742 R-ASA-8934208-3 AVESA.00001b.r3.7Dg0001742 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.7Dg0001817 R-ASA-9918159 AVESA.00001b.r3.7Dg0001817 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0001825 R-ASA-1122403-2 AVESA.00001b.r3.7Dg0001825 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0001839 R-ASA-1129547 AVESA.00001b.r3.7Dg0001839 [cytosol] R-ASA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119400 Methionine biosynthesis II none Avena sativa AVESA.00001b.r3.7Dg0001863 R-ASA-1124613-2 AVESA.00001b.r3.7Dg0001863 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0001866 R-ASA-5608120-3 AVESA.00001b.r3.7Dg0001866 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.7Dg0001874 R-ASA-1127382 AVESA.00001b.r3.7Dg0001874 [cytosol] R-ASA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119460 Isoleucine biosynthesis from threonine none Avena sativa AVESA.00001b.r3.7Dg0001874 R-ASA-1127382 AVESA.00001b.r3.7Dg0001874 [cytosol] R-ASA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119600 Valine biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0001875 R-ASA-1129723 AVESA.00001b.r3.7Dg0001875 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0001891 R-ASA-5654827-2 AVESA.00001b.r3.7Dg0001891 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.7Dg0001923 R-ASA-1123059 AVESA.00001b.r3.7Dg0001923 [cytosol] R-ASA-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119317 Spermine biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0001923 R-ASA-1123059 AVESA.00001b.r3.7Dg0001923 [cytosol] R-ASA-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119343 Spermidine biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0001951 R-ASA-1128914-3 AVESA.00001b.r3.7Dg0001951 [cytosol] R-ASA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119281 Aspartate biosynthesis I none Avena sativa AVESA.00001b.r3.7Dg0001981 R-ASA-1127523 AVESA.00001b.r3.7Dg0001981 [cytosol] R-ASA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Avena sativa AVESA.00001b.r3.7Dg0002028 R-ASA-5632120-2 AVESA.00001b.r3.7Dg0002028 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.7Dg0002044 R-ASA-6787012-2 AVESA.00001b.r3.7Dg0002044 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.7Dg0002050 R-ASA-1126307-2 AVESA.00001b.r3.7Dg0002050 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0002113 R-ASA-1127170-3 AVESA.00001b.r3.7Dg0002113 [cytosol] R-ASA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119276 Choline biosynthesis III none Avena sativa AVESA.00001b.r3.7Dg0002142 R-ASA-5149694 AVESA.00001b.r3.7Dg0002142 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.7Dg0002212 R-ASA-1126400-2 AVESA.00001b.r3.7Dg0002212 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0002285 R-ASA-1128178-2 AVESA.00001b.r3.7Dg0002285 [cytosol] R-ASA-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119322 Leucodelphinidin biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0002285 R-ASA-1128178-2 AVESA.00001b.r3.7Dg0002285 [cytosol] R-ASA-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0002285 R-ASA-9609575-2 AVESA.00001b.r3.7Dg0002285 [endoplasmic reticulum membrane] R-ASA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609573 Tricin biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0002298 R-ASA-4827046-2 AVESA.00001b.r3.7Dg0002298 [plastid stroma] R-ASA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-4827054 Tetrapyrrole biosynthesis I none Avena sativa AVESA.00001b.r3.7Dg0002300 R-ASA-5632143 AVESA.00001b.r3.7Dg0002300 [nucleoplasm] R-ASA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5632095 Brassinosteroid signaling none Avena sativa AVESA.00001b.r3.7Dg0002300 R-ASA-5632143 AVESA.00001b.r3.7Dg0002300 [nucleoplasm] R-ASA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924451 Shoot (tiller) formation and regulation of tiller angle none Avena sativa AVESA.00001b.r3.7Dg0002311 R-ASA-9681920-2 AVESA.00001b.r3.7Dg0002311 [cytosol] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.7Dg0002320 R-ASA-3240749-3 AVESA.00001b.r3.7Dg0002320 [cytosol] R-ASA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Avena sativa AVESA.00001b.r3.7Dg0002320 R-ASA-9681918-3 AVESA.00001b.r3.7Dg0002320 [cytosol] R-ASA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119574 UDP-L-arabinose biosynthesis and transport none Avena sativa AVESA.00001b.r3.7Dg0002336 R-ASA-1129880-3 AVESA.00001b.r3.7Dg0002336 [chloroplast] R-ASA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119494 Tryptophan biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0002368 R-ASA-9639211 AVESA.00001b.r3.7Dg0002368 [plant-type vacuole membrane] R-ASA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9639136 Response to Aluminum stress none Avena sativa AVESA.00001b.r3.7Dg0002392 R-ASA-8933763-2 AVESA.00001b.r3.7Dg0002392 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.7Dg0002396 R-ASA-2685721-2 AVESA.00001b.r3.7Dg0002396 [cytosol] R-ASA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119580 IAA biosynthesis II none Avena sativa AVESA.00001b.r3.7Dg0002475 R-ASA-5608154-2 AVESA.00001b.r3.7Dg0002475 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.7Dg0002486 R-ASA-1128624-2 AVESA.00001b.r3.7Dg0002486 [mitochondrial inner membrane] R-ASA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119479 Valine degradation none Avena sativa AVESA.00001b.r3.7Dg0002544 R-ASA-1125920 AVESA.00001b.r3.7Dg0002544 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.7Dg0002544 R-ASA-1125920 AVESA.00001b.r3.7Dg0002544 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.7Dg0002547 R-ASA-1124598-2 AVESA.00001b.r3.7Dg0002547 [cytosol] R-ASA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119300 Glycolipid desaturation none Avena sativa AVESA.00001b.r3.7Dg0002578 R-ASA-8858085 AVESA.00001b.r3.7Dg0002578 [plasma membrane] R-ASA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8858053 Polar auxin transport none Avena sativa AVESA.00001b.r3.7Dg0002578 R-ASA-8858085 AVESA.00001b.r3.7Dg0002578 [plasma membrane] R-ASA-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924494 Gravity sensing and statolith sedimentation none Avena sativa AVESA.00001b.r3.7Dg0002578 R-ASA-9928298 PIN2 [endosome] R-ASA-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924494 Gravity sensing and statolith sedimentation none Avena sativa AVESA.00001b.r3.7Dg0002584 R-ASA-1123454-3 AVESA.00001b.r3.7Dg0002584 [chloroplast inner membrane] R-ASA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119287 Vitamin E biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0002596 R-ASA-1130078 AVESA.00001b.r3.7Dg0002596 [cytosol] R-ASA-1119440 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119440 Anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside) none Avena sativa AVESA.00001b.r3.7Dg0002596 R-ASA-2672102 AVESA.00001b.r3.7Dg0002596 [cytosol] R-ASA-1119514 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119514 Anthocyanin biosynthesis (delphinidin 3-O-glucoside) none Avena sativa AVESA.00001b.r3.7Dg0002616 R-ASA-1125014 AVESA.00001b.r3.7Dg0002616 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.7Dg0002705 R-ASA-9684723 AVESA.00001b.r3.7Dg0002705 [cytosol] R-ASA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609102 Flower development none Avena sativa AVESA.00001b.r3.7Dg0002776 R-ASA-9918274-2 SBE1 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0002776 R-ASA-9626342-2 AVESA.00001b.r3.7Dg0002776 [plastid stroma] R-ASA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9626305 Regulatory network of nutrient accumulation none Avena sativa AVESA.00001b.r3.7Dg0002791 R-ASA-5608129-2 AVESA.00001b.r3.7Dg0002791 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.7Dg0002843 R-ASA-1123534-6 AVESA.00001b.r3.7Dg0002843 [cytosol] R-ASA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119438 Secologanin and strictosidine biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0002848 R-ASA-5608154-3 AVESA.00001b.r3.7Dg0002848 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.7Dg0002853 R-ASA-1128624 AVESA.00001b.r3.7Dg0002853 [mitochondrial inner membrane] R-ASA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119479 Valine degradation none Avena sativa AVESA.00001b.r3.7Dg0002871 R-ASA-8879061 LOS2 homolog [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.7Dg0002912 R-ASA-1125920-2 AVESA.00001b.r3.7Dg0002912 [cytosol] R-ASA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119273 Lysine biosynthesis I none Avena sativa AVESA.00001b.r3.7Dg0002912 R-ASA-1125920-2 AVESA.00001b.r3.7Dg0002912 [cytosol] R-ASA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119283 Lysine biosynthesis II none Avena sativa AVESA.00001b.r3.7Dg0002922 R-ASA-9658573-2 AVESA.00001b.r3.7Dg0002922 [endoplasmic reticulum lumen] R-ASA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119502 Allantoin degradation none Avena sativa AVESA.00001b.r3.7Dg0002957 R-ASA-8858085-3 AVESA.00001b.r3.7Dg0002957 [plasma membrane] R-ASA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8858053 Polar auxin transport none Avena sativa AVESA.00001b.r3.7Dg0002957 R-ASA-8858085-3 AVESA.00001b.r3.7Dg0002957 [plasma membrane] R-ASA-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924494 Gravity sensing and statolith sedimentation none Avena sativa AVESA.00001b.r3.7Dg0002957 R-ASA-9928298-3 PIN2 [endosome] R-ASA-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924494 Gravity sensing and statolith sedimentation none Avena sativa AVESA.00001b.r3.7Dg0002960 R-ASA-1123454 AVESA.00001b.r3.7Dg0002960 [chloroplast inner membrane] R-ASA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119287 Vitamin E biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0002972 R-ASA-1130078-3 AVESA.00001b.r3.7Dg0002972 [cytosol] R-ASA-1119440 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119440 Anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside) none Avena sativa AVESA.00001b.r3.7Dg0002972 R-ASA-2672102-3 AVESA.00001b.r3.7Dg0002972 [cytosol] R-ASA-1119514 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119514 Anthocyanin biosynthesis (delphinidin 3-O-glucoside) none Avena sativa AVESA.00001b.r3.7Dg0002985 R-ASA-1125014-3 AVESA.00001b.r3.7Dg0002985 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.7Dg0003081 R-ASA-9684723-2 AVESA.00001b.r3.7Dg0003081 [cytosol] R-ASA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609102 Flower development none Avena sativa AVESA.00001b.r3.7Dg0003155 R-ASA-9918274-3 SBE1 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0003155 R-ASA-9626342-3 AVESA.00001b.r3.7Dg0003155 [plastid stroma] R-ASA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9626305 Regulatory network of nutrient accumulation none Avena sativa AVESA.00001b.r3.7Dg0003172 R-ASA-9675335 AVESA.00001b.r3.7Dg0003172 [mitochondrial matrix] R-ASA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675508 Root elongation none Avena sativa AVESA.00001b.r3.7Dg0003186 R-ASA-9640675 AVESA.00001b.r3.7Dg0003186 [nucleoplasm] R-ASA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9640882 Assembly of pre-replication complex none Avena sativa AVESA.00001b.r3.7Dg0003186 R-ASA-9640675 AVESA.00001b.r3.7Dg0003186 [nucleoplasm] R-ASA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9645850 Activation of pre-replication complex none Avena sativa AVESA.00001b.r3.7Dg0003193 R-ASA-1128173-2 AVESA.00001b.r3.7Dg0003193 [cytosol] R-ASA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119437 Glutathione redox reactions I none Avena sativa AVESA.00001b.r3.7Dg0003213 R-ASA-1123787-4 AVESA.00001b.r3.7Dg0003213 [cytosol] R-ASA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119418 Suberin biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0003213 R-ASA-1123787-4 AVESA.00001b.r3.7Dg0003213 [cytosol] R-ASA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119582 Phenylpropanoid biosynthesis, initial reactions none Avena sativa AVESA.00001b.r3.7Dg0003236 R-ASA-1129485-2 AVESA.00001b.r3.7Dg0003236 [cytosol] R-ASA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119341 Galactosylcyclitol biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0003239 R-ASA-1123042 AVESA.00001b.r3.7Dg0003239 R-ASA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119400 Methionine biosynthesis II none Avena sativa AVESA.00001b.r3.7Dg0003268 R-ASA-1125910 AVESA.00001b.r3.7Dg0003268 [plastid stroma] R-ASA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119367 Polyisoprenoid biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0003302 R-ASA-8934025 AVESA.00001b.r3.7Dg0003302 [nucleoplasm] R-ASA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934036 Long day regulated expression of florigens none Avena sativa AVESA.00001b.r3.7Dg0003302 R-ASA-8934025 AVESA.00001b.r3.7Dg0003302 [nucleoplasm] R-ASA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934108 Short day regulated expression of florigens none Avena sativa AVESA.00001b.r3.7Dg0003302 R-ASA-8934025 AVESA.00001b.r3.7Dg0003302 [nucleoplasm] R-ASA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934257 Transition from vegetative to reproductive shoot apical meristem none Avena sativa AVESA.00001b.r3.7Dg0003302 R-ASA-9684733 AVESA.00001b.r3.7Dg0003302 [cytosol] R-ASA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8934257 Transition from vegetative to reproductive shoot apical meristem none Avena sativa AVESA.00001b.r3.7Dg0003302 R-ASA-9684733 AVESA.00001b.r3.7Dg0003302 [cytosol] R-ASA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609102 Flower development none Avena sativa AVESA.00001b.r3.7Dg0003302 R-ASA-8934025 AVESA.00001b.r3.7Dg0003302 [nucleoplasm] R-ASA-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928946 Drought escape (DE) via ABA-independent pathway none Avena sativa AVESA.00001b.r3.7Dg0003302 R-ASA-8934025 AVESA.00001b.r3.7Dg0003302 [nucleoplasm] R-ASA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928995 Drought escape (DE) via ABA-dependent pathway none Avena sativa AVESA.00001b.r3.7Dg0003317 R-ASA-1128586 AVESA.00001b.r3.7Dg0003317 [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0003330 R-ASA-5654840-2 AVESA.00001b.r3.7Dg0003330 [nucleoplasm] R-ASA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5654828 Strigolactone signaling none Avena sativa AVESA.00001b.r3.7Dg0003330 R-ASA-5654840-2 AVESA.00001b.r3.7Dg0003330 [nucleoplasm] R-ASA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Avena sativa AVESA.00001b.r3.7Dg0003334 R-ASA-9675391-2 AVESA.00001b.r3.7Dg0003334 [nucleoplasm] R-ASA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9675508 Root elongation none Avena sativa AVESA.00001b.r3.7Dg0003362 R-ASA-1129769-4 AVESA.00001b.r3.7Dg0003362 [cytosol] R-ASA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119332 Jasmonic acid biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0003362 R-ASA-1129769-4 AVESA.00001b.r3.7Dg0003362 [cytosol] R-ASA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119618 13-LOX and 13-HPL pathway none Avena sativa AVESA.00001b.r3.7Dg0003384 R-ASA-1129355 AVESA.00001b.r3.7Dg0003384 [plastid] R-ASA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119403 Removal of superoxide radicals none Avena sativa AVESA.00001b.r3.7Dg0003419 R-ASA-1129282-3 AVESA.00001b.r3.7Dg0003419 [cytosol] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0003419 R-ASA-1129282-3 AVESA.00001b.r3.7Dg0003419 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.7Dg0003420 R-ASA-1129282-2 AVESA.00001b.r3.7Dg0003420 [cytosol] R-ASA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119428 GDP-D-rhamnose biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0003420 R-ASA-1129282-2 AVESA.00001b.r3.7Dg0003420 [cytosol] R-ASA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Avena sativa AVESA.00001b.r3.7Dg0003427 R-ASA-8878987 AVESA.00001b.r3.7Dg0003427 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.7Dg0003438 R-ASA-9031256 AVESA.00001b.r3.7Dg0003438 [endoplasmic reticulum lumen] R-ASA-9031225 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9031225 Response to phosphate deficiency none Avena sativa AVESA.00001b.r3.7Dg0003438 R-ASA-9031289 AVESA.00001b.r3.7Dg0003438 [plasma membrane] R-ASA-9031225 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9031225 Response to phosphate deficiency none Avena sativa AVESA.00001b.r3.7Dg0003438 R-ASA-9031289 AVESA.00001b.r3.7Dg0003438 [plasma membrane] R-ASA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9618218 Arsenic uptake and detoxification none Avena sativa AVESA.00001b.r3.7Dg0003445 R-ASA-1123211 AVESA.00001b.r3.7Dg0003445 [cytosol] R-ASA-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Avena sativa AVESA.00001b.r3.7Dg0003445 R-ASA-1123211 AVESA.00001b.r3.7Dg0003445 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0003445 R-ASA-1123211 AVESA.00001b.r3.7Dg0003445 [cytosol] R-ASA-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119439 Cholesterol biosynthesis III (via desmosterol) none Avena sativa AVESA.00001b.r3.7Dg0003445 R-ASA-1123211 AVESA.00001b.r3.7Dg0003445 [cytosol] R-ASA-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119559 Cholesterol biosynthesis I none Avena sativa AVESA.00001b.r3.7Dg0003448 R-ASA-1130247 AVESA.00001b.r3.7Dg0003448 [plastid stroma] R-ASA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119519 Calvin cycle none Avena sativa AVESA.00001b.r3.7Dg0003458 R-ASA-9918210-2 granule-bound starch synthase 1 (GBSSI, or Waxy) [amyloplast] R-ASA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119477 Starch biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0003458 R-ASA-9626344-2 AVESA.00001b.r3.7Dg0003458 [plastid stroma] R-ASA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9626305 Regulatory network of nutrient accumulation none Avena sativa AVESA.00001b.r3.7Dg0003459 R-ASA-1123832 AVESA.00001b.r3.7Dg0003459 [cytosol] R-ASA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119304 Putrescine biosynthesis II none Avena sativa AVESA.00001b.r3.7Dg0003459 R-ASA-1123832 AVESA.00001b.r3.7Dg0003459 [cytosol] R-ASA-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119447 Putrescine biosynthesis I none Avena sativa AVESA.00001b.r3.7Dg0003499 R-ASA-1130456-3 AVESA.00001b.r3.7Dg0003499 [plastid stroma] R-ASA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119430 Chorismate biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0003505 R-ASA-8879085 AVESA.00001b.r3.7Dg0003505 [nucleoplasm] R-ASA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8879007 Response to cold temperature none Avena sativa AVESA.00001b.r3.7Dg0003524 R-ASA-1128298-6 AVESA.00001b.r3.7Dg0003524 [cytosol] R-ASA-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119271 Threonine degradation none Avena sativa AVESA.00001b.r3.7Dg0003524 R-ASA-1128298-6 AVESA.00001b.r3.7Dg0003524 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.7Dg0003577 R-ASA-1123609 AVESA.00001b.r3.7Dg0003577 [plasma membrane] R-ASA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119314 Cellulose biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0003583 R-ASA-6787880-2 AVESA.00001b.r3.7Dg0003583 [nucleoplasm] R-ASA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6788019 Salicylic acid signaling none Avena sativa AVESA.00001b.r3.7Dg0003596 R-ASA-1127734 AVESA.00001b.r3.7Dg0003596 [cytosol] R-ASA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119506 tyrosine degradation I none Avena sativa AVESA.00001b.r3.7Dg0003655 R-ASA-1125766-2 AVESA.00001b.r3.7Dg0003655 [cytosol] R-ASA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119557 GA12 biosynthesis none Avena sativa AVESA.00001b.r3.7Dg0003657 R-ASA-9609343-6 AVESA.00001b.r3.7Dg0003657 [cytosol] R-ASA-9609352 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609352 Lycopene catabolism none Avena sativa AVESA.00001b.r3.Ung0000003 R-ASA-1126625-7 AVESA.00001b.r3.Ung0000003 [cytosol] R-ASA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119334 Ethylene biosynthesis from methionine none Avena sativa AVESA.00001b.r3.Ung0000003 R-ASA-1126625-7 AVESA.00001b.r3.Ung0000003 [cytosol] R-ASA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119501 S-adenosyl-L-methionine cycle none Avena sativa AVESA.00001b.r3.Ung0000003 R-ASA-1126625-7 AVESA.00001b.r3.Ung0000003 [cytosol] R-ASA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119624 Methionine salvage pathway none Avena sativa AVESA.00001b.r3.Ung0000003 R-ASA-9025797-7 AVESA.00001b.r3.Ung0000003 [cytosol] R-ASA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9025754 Mugineic acid biosynthesis none Avena sativa AVESA.00001b.r3.Ung0000006 R-ASA-6787199 AVESA.00001b.r3.Ung0000006 [nucleoplasm] R-ASA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-6787011 Jasmonic acid signaling none Avena sativa AVESA.00001b.r3.Ung0000010 R-ASA-1123745-5 AVESA.00001b.r3.Ung0000010 [endoplasmic reticulum membrane] R-ASA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119260 Cardiolipin biosynthesis none Avena sativa AVESA.00001b.r3.Ung0000010 R-ASA-1123745-5 AVESA.00001b.r3.Ung0000010 [endoplasmic reticulum membrane] R-ASA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119402 Phospholipid biosynthesis I none Avena sativa AVESA.00001b.r3.Ung0000017 R-ASA-1124935-3 AVESA.00001b.r3.Ung0000017 [cytosol] R-ASA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119349 S-methylmethionine cycle none Avena sativa AVESA.00001b.r3.Ung0000078 R-ASA-1126888-5 AVESA.00001b.r3.Ung0000078 [cytosol] R-ASA-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119360 Fructan biosynthesis none Avena sativa AVESA.00001b.r3.Ung0000081 R-ASA-1126888 AVESA.00001b.r3.Ung0000081 [cytosol] R-ASA-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119360 Fructan biosynthesis none Avena sativa AVESA.00001b.r3.Ung0000087 R-ASA-1129029-6 AVESA.00001b.r3.Ung0000087 [cytosol] R-ASA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119501 S-adenosyl-L-methionine cycle none Avena sativa AVESA.00001b.r3.Ung0000088 R-ASA-1129029-4 AVESA.00001b.r3.Ung0000088 [cytosol] R-ASA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119501 S-adenosyl-L-methionine cycle none Avena sativa AVESA.00001b.r3.Ung0000183 R-ASA-8933860-2 AVESA.00001b.r3.Ung0000183 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.Ung0000183 R-ASA-8933860-2 AVESA.00001b.r3.Ung0000183 [nucleoplasm] R-ASA-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9928946 Drought escape (DE) via ABA-independent pathway none Avena sativa AVESA.00001b.r3.Ung0000185 R-ASA-1123046-4 AVESA.00001b.r3.Ung0000185 [cytosol] R-ASA-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119386 UDP-N-acetylgalactosamine biosynthesis none Avena sativa AVESA.00001b.r3.Ung0000247 R-ASA-1124861-3 AVESA.00001b.r3.Ung0000247 [plastid stroma] R-ASA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119449 Carotenoid biosynthesis none Avena sativa AVESA.00001b.r3.Ung0000285 R-ASA-8868990-2 AVESA.00001b.r3.Ung0000285 [endoplasmic reticulum membrane] R-ASA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8868949 Intracellular auxin transport none Avena sativa AVESA.00001b.r3.Ung0000310 R-ASA-1125612-3 AVESA.00001b.r3.Ung0000310 [cytosol] R-ASA-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119353 Linear furanocoumarin biosynthesis none Avena sativa AVESA.00001b.r3.Ung0000313 R-ASA-8933787 AVESA.00001b.r3.Ung0000313 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.Ung0000330 R-ASA-9025492-2 AVESA.00001b.r3.Ung0000330 [endoplasmic reticulum membrane] R-ASA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119325 Sphingolipid metabolism none Avena sativa AVESA.00001b.r3.Ung0000330 R-ASA-1126933-2 AVESA.00001b.r3.Ung0000330 [cytosol] R-ASA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119610 Biotin biosynthesis II none Avena sativa AVESA.00001b.r3.Ung0000356 R-ASA-9826680 AVESA.00001b.r3.Ung0000356 [nucleoplasm] R-ASA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Avena sativa AVESA.00001b.r3.Ung0000360 R-ASA-5608140-3 AVESA.00001b.r3.Ung0000360 [nucleoplasm] R-ASA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-5608118 Auxin signalling none Avena sativa AVESA.00001b.r3.Ung0000395 R-ASA-8987448 AVESA.00001b.r3.Ung0000395 [peroxisomal matrix] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.Ung0000405 R-ASA-1126636-4 AVESA.00001b.r3.Ung0000405 [cytosol] R-ASA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119370 Sterol biosynthesis none Avena sativa AVESA.00001b.r3.Ung0000416 R-ASA-8987448-2 AVESA.00001b.r3.Ung0000416 [peroxisomal matrix] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.Ung0000418 R-ASA-1129964 AVESA.00001b.r3.Ung0000418 [cytosol] R-ASA-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119378 Myo-inositol biosynthesis none Avena sativa AVESA.00001b.r3.Ung0000418 R-ASA-1129964 AVESA.00001b.r3.Ung0000418 [cytosol] R-ASA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119434 Phytic acid biosynthesis (lipid-independent) none Avena sativa AVESA.00001b.r3.Ung0000443 R-ASA-9609608-4 AVESA.00001b.r3.Ung0000443 [cytosol] R-ASA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609573 Tricin biosynthesis none Avena sativa AVESA.00001b.r3.Ung0000443 R-ASA-9916171-4 OsOMT [cytosol] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.Ung0000443 R-ASA-9916312-4 OsOMT [nucleoplasm] R-ASA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9916190 Root angle formation: elongation and curvature response none Avena sativa AVESA.00001b.r3.Ung0000480 R-ASA-9609343-2 AVESA.00001b.r3.Ung0000480 [cytosol] R-ASA-9609352 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-9609352 Lycopene catabolism none Avena sativa AVESA.00001b.r3.Ung0000515 R-ASA-8933787-2 AVESA.00001b.r3.Ung0000515 [nucleoplasm] R-ASA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-8933811 Circadian rhythm none Avena sativa AVESA.00001b.r3.Ung0000541 R-ASA-8987535-2 AVESA.00001b.r3.Ung0000541 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.Ung0000569 R-ASA-8987535-4 AVESA.00001b.r3.Ung0000569 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa AVESA.00001b.r3.Ung0000623 R-ASA-8987535-3 AVESA.00001b.r3.Ung0000623 [chloroplast] R-ASA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ASA-1119312 Photorespiration none Avena sativa Aco000007.1.path1 R-ACO-9640723 Aco000007.1.path1 [nucleoplasm] R-ACO-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640887 G1/S transition none Ananas comosus Aco000033.1.path1 R-ACO-5138500-2 Aco000033.1.path1 [plastid stroma] R-ACO-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119263 Arginine biosynthesis none Ananas comosus Aco000033.1.path1 R-ACO-1129397-2 Aco000033.1.path1 [cytosol] R-ACO-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119273 Lysine biosynthesis I none Ananas comosus Aco000033.1.path1 R-ACO-1129397-2 Aco000033.1.path1 [cytosol] R-ACO-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119283 Lysine biosynthesis II none Ananas comosus Aco000033.1.path1 R-ACO-1129397-2 Aco000033.1.path1 [cytosol] R-ACO-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119295 Homoserine biosynthesis none Ananas comosus Aco000033.1.path1 R-ACO-5138500-2 Aco000033.1.path1 [plastid stroma] R-ACO-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119539 Ornithine biosynthesis none Ananas comosus Aco000033.1.path1 R-ACO-5138500-2 Aco000033.1.path1 [plastid stroma] R-ACO-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119622 Arginine biosynthesis II (acetyl cycle) none Ananas comosus Aco000037.1.path1 R-ACO-5654957 Aco000037.1.path1 [Golgi lumen] R-ACO-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5654909 Xylan biosynthesis none Ananas comosus Aco000045.1.path1 R-ACO-4827081 Aco000045.1.path1 [plastid stroma] R-ACO-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-4827054 Tetrapyrrole biosynthesis I none Ananas comosus Aco000149.1.path1 R-ACO-6788201 Aco000149.1.path1 [nucleoplasm] R-ACO-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6788019 Salicylic acid signaling none Ananas comosus Aco000155.1.path1 R-ACO-5654911 Aco000155.1.path1 [Golgi lumen] R-ACO-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5654909 Xylan biosynthesis none Ananas comosus Aco000157.1.path1 R-ACO-4827040 Aco000157.1.path1 [plastid stroma] R-ACO-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-4827054 Tetrapyrrole biosynthesis I none Ananas comosus Aco000161.1.path1 R-ACO-1124490 Aco000161.1.path1 [cytosol] R-ACO-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119534 Pyridoxal 5'-phosphate salvage pathway none Ananas comosus Aco000161.1.path1 R-ACO-1124490 Aco000161.1.path1 [cytosol] R-ACO-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119594 Pyridoxal 5'-phosphate biosynthesis none Ananas comosus Aco000210.1.path1 R-ACO-9682506 Aco000210.1.path1 [cytosol] R-ACO-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119410 Ascorbate biosynthesis none Ananas comosus Aco000213.1.path1 R-ACO-5679502 Aco000213.1.path1 [plastid stroma] R-ACO-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5367729 Strigolactone biosynthesis none Ananas comosus Aco000258.1.path1 R-ACO-9025809 Aco000258.1.path1 [cytosol] R-ACO-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9025754 Mugineic acid biosynthesis none Ananas comosus Aco000268.1.path1 R-ACO-9682527 Aco000268.1.path1 [cytosol] R-ACO-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119410 Ascorbate biosynthesis none Ananas comosus Aco000274.1.path1 R-ACO-9639029-2 Aco000274.1.path1 [cytosol] R-ACO-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119434 Phytic acid biosynthesis (lipid-independent) none Ananas comosus Aco000276.1.path1 R-ACO-1123895-2 Aco000276.1.path1 [cytosol] R-ACO-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119334 Ethylene biosynthesis from methionine none Ananas comosus Aco000276.1.path1 R-ACO-1123895-2 Aco000276.1.path1 [cytosol] R-ACO-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119624 Methionine salvage pathway none Ananas comosus Aco000291.1.path1 R-ACO-9675803 Aco000291.1.path1 [nucleoplasm] R-ACO-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675815 Leading strand synthesis none Ananas comosus Aco000300.1.path1 R-ACO-1127734 Aco000300.1.path1 [cytosol] R-ACO-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119506 tyrosine degradation I none Ananas comosus Aco000360.1.path1 R-ACO-1123059 Aco000360.1.path1 [cytosol] R-ACO-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119317 Spermine biosynthesis none Ananas comosus Aco000360.1.path1 R-ACO-1123059 Aco000360.1.path1 [cytosol] R-ACO-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119343 Spermidine biosynthesis none Ananas comosus Aco000392.1.path1 R-ACO-5632312-2 Aco000392.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco000392.1.path1 R-ACO-5632125-2 phospho-Aco000392.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco000392.1.path1 R-ACO-5632342-2 phospho-Aco000392.1.path1 [cytosol] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco000392.1.path1 R-ACO-5632312-2 Aco000392.1.path1 [nucleoplasm] R-ACO-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5679411 Gibberellin signaling none Ananas comosus Aco000404.1.path1 R-ACO-1122541 Aco000404.1.path1 [cytosol] R-ACO-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Ananas comosus Aco000404.1.path1 R-ACO-1122541 Aco000404.1.path1 [cytosol] R-ACO-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Ananas comosus Aco000415.1.path1 R-ACO-1127523 Aco000415.1.path1 [cytosol] R-ACO-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Ananas comosus Aco000485.1.path1 R-ACO-8986695 Aco000485.1.path1 [endoplasmic reticulum membrane] R-ACO-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8986768 Anther and pollen development none Ananas comosus Aco000490.1.path1 R-ACO-1128396-2 Aco000490.1.path1 [cytosol] R-ACO-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119473 Cytokinins-O-glucoside biosynthesis none Ananas comosus Aco000491.1.path1 R-ACO-1128396 Aco000491.1.path1 [cytosol] R-ACO-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119473 Cytokinins-O-glucoside biosynthesis none Ananas comosus Aco000498.1.path1 R-ACO-1127539-2 Aco000498.1.path1 [cytosol] R-ACO-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Ananas comosus Aco000498.1.path1 R-ACO-1127539-2 Aco000498.1.path1 [cytosol] R-ACO-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119439 Cholesterol biosynthesis III (via desmosterol) none Ananas comosus Aco000498.1.path1 R-ACO-1127539-2 Aco000498.1.path1 [cytosol] R-ACO-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119559 Cholesterol biosynthesis I none Ananas comosus Aco000531.1.path1 R-ACO-1126799 Aco000531.1.path1 [cytosol] R-ACO-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119428 GDP-D-rhamnose biosynthesis none Ananas comosus Aco000531.1.path1 R-ACO-1126799 Aco000531.1.path1 [cytosol] R-ACO-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119563 UDP-D-xylose biosynthesis none Ananas comosus Aco000531.1.path1 R-ACO-1126799 Aco000531.1.path1 [cytosol] R-ACO-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Ananas comosus Aco000539.1.path1 R-ACO-1127911 Aco000539.1.path1 [mitochondrial matrix] R-ACO-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119365 Lysine degradation II none Ananas comosus Aco000602.1.path1 R-ACO-1127373 Aco000602.1.path1 [cytosol] R-ACO-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119297 Beta-alanine biosynthesis III none Ananas comosus Aco000611.1.path1 R-ACO-9916302 Aco000611.1.path1 [nucleoplasm] R-ACO-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9916190 Root angle formation: elongation and curvature response none Ananas comosus Aco000614.1.path1 R-ACO-1130025-2 Aco000614.1.path1 [endosome] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco000614.1.path1 R-ACO-5679302-2 Aco000614.1.path1 [plasma membrane] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco000616.1.path1 R-ACO-1130025 Aco000616.1.path1 [endosome] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco000616.1.path1 R-ACO-5679302 Aco000616.1.path1 [plasma membrane] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco000618.1.path1 R-ACO-1123943 Aco000618.1.path1 [plastid] R-ACO-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119365 Lysine degradation II none Ananas comosus Aco000623.1.path1 R-ACO-1250417 Aco000623.1.path1 [cytosol] R-ACO-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119374 Abscisic acid biosynthesis none Ananas comosus Aco000644.1.path1 R-ACO-9930255 MPK15 [nucleoplasm] R-ACO-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9766881 TF network involved in salinity response none Ananas comosus Aco000664.1.path1 R-ACO-1129390 Aco000664.1.path1 [mitochondrion] R-ACO-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119506 tyrosine degradation I none Ananas comosus Aco000677.1.path1 R-ACO-1129507-2 Aco000677.1.path1 [cytosol] R-ACO-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119452 Galactose degradation II none Ananas comosus Aco000704.1.path1 R-ACO-9675857 Aco000704.1.path1 [nucleoplasm] R-ACO-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675782 Maturation none Ananas comosus Aco000707.1.path1 R-ACO-1129161-2 Aco000707.1.path1 [amyloplast] R-ACO-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119477 Starch biosynthesis none Ananas comosus Aco000729.1.path1 R-ACO-1124496-2 Aco000729.1.path1 [cytosol] R-ACO-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119615 Mevalonate pathway none Ananas comosus Aco000734.1.path1 R-ACO-8868866 Aco000734.1.path1 [endoplasmic reticulum membrane] R-ACO-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8868949 Intracellular auxin transport none Ananas comosus Aco000748.1.path1 R-ACO-1124598 Aco000748.1.path1 [cytosol] R-ACO-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119300 Glycolipid desaturation none Ananas comosus Aco000772.1.path1 R-ACO-2960790 Aco000772.1.path1 [cytosol] R-ACO-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119386 UDP-N-acetylgalactosamine biosynthesis none Ananas comosus Aco000772.1.path1 R-ACO-2960790 Aco000772.1.path1 [cytosol] R-ACO-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9030654 Primary root development none Ananas comosus Aco000904.1.path1 R-ACO-5632199 Aco000904.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco000923.1.path1 R-ACO-9025482 Aco000923.1.path1 [endoplasmic reticulum membrane] R-ACO-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119325 Sphingolipid metabolism none Ananas comosus Aco000932.1.path1 R-ACO-1129438 Aco000932.1.path1 [cytosol] R-ACO-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119438 Secologanin and strictosidine biosynthesis none Ananas comosus Aco000950.1.path1 R-ACO-1125638 Aco000950.1.path1 [cytosol] R-ACO-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119516 Trehalose biosynthesis I none Ananas comosus Aco000972.1.path1 R-ACO-9640729 Aco000972.1.path1 [nucleoplasm] R-ACO-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640760 G1 phase none Ananas comosus Aco000972.1.path1 R-ACO-9640729 Aco000972.1.path1 [nucleoplasm] R-ACO-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640887 G1/S transition none Ananas comosus Aco001001.1.path1 R-ACO-6788036 Aco001001.1.path1 [cytosol] R-ACO-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6788019 Salicylic acid signaling none Ananas comosus Aco001001.1.path1 R-ACO-1126611 Aco001001.1.path1 [nucleoplasm] R-ACO-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6788019 Salicylic acid signaling none Ananas comosus Aco001024.1.path1 R-ACO-1128160 Aco001024.1.path1 [cytosol] R-ACO-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119516 Trehalose biosynthesis I none Ananas comosus Aco001056.1.path1 R-ACO-5632238 Aco001056.1.path1 [cytosol] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco001056.1.path1 R-ACO-5632238 Aco001056.1.path1 [cytosol] R-ACO-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8934257 Transition from vegetative to reproductive shoot apical meristem none Ananas comosus Aco001056.1.path1 R-ACO-9927894 Aco001056.1.path1 [nucleoplasm] R-ACO-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8934257 Transition from vegetative to reproductive shoot apical meristem none Ananas comosus Aco001056.1.path1 R-ACO-5632238 Aco001056.1.path1 [cytosol] R-ACO-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9609102 Flower development none Ananas comosus Aco001056.1.path1 R-ACO-5632238 Aco001056.1.path1 [cytosol] R-ACO-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9928831 Severe drought none Ananas comosus Aco001056.1.path1 R-ACO-9927894 Aco001056.1.path1 [nucleoplasm] R-ACO-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9928831 Severe drought none Ananas comosus Aco001216.1.path1 R-ACO-8933710 Aco001216.1.path1 [nucleoplasm] R-ACO-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8933811 Circadian rhythm none Ananas comosus Aco001233.1.path1 R-ACO-1129934 Aco001233.1.path1 [plastid stroma] R-ACO-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119430 Chorismate biosynthesis none Ananas comosus Aco001240.1.path1 R-ACO-5632114-2 Aco001240.1.path1 [cytosol] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco001268.1.path1 R-ACO-5632192 Aco001268.1.path1 [cytosol] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco001318.1.path1 R-ACO-9826649 Aco001318.1.path1 [nucleoplasm] R-ACO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Ananas comosus Aco001326.1.path1 R-ACO-9928961 Aco001326.1.path1 [nucleoplasm] R-ACO-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9928995 Drought escape (DE) via ABA-dependent pathway none Ananas comosus Aco001348.1.path1 R-ACO-1128319 Aco001348.1.path1 [cytosol] R-ACO-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119341 Galactosylcyclitol biosynthesis none Ananas comosus Aco001358.1.path1 R-ACO-1122827 Aco001358.1.path1 [cytosol] R-ACO-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119334 Ethylene biosynthesis from methionine none Ananas comosus Aco001389.1.path1 R-ACO-1123998 Aco001389.1.path1 [chloroplast] R-ACO-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119494 Tryptophan biosynthesis none Ananas comosus Aco001397.1.path1 R-ACO-6787198 Aco001397.1.path1 [cytosol] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco001401.1.path1 R-ACO-9640689 Aco001401.1.path1 [nucleoplasm] R-ACO-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675782 Maturation none Ananas comosus Aco001401.1.path1 R-ACO-9640689 Aco001401.1.path1 [nucleoplasm] R-ACO-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675815 Leading strand synthesis none Ananas comosus Aco001401.1.path1 R-ACO-9640689 Aco001401.1.path1 [nucleoplasm] R-ACO-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675885 Lagging strand synthesis none Ananas comosus Aco001417.1.path1 R-ACO-1123261-2 Aco001417.1.path1 [cytosol] R-ACO-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119410 Ascorbate biosynthesis none Ananas comosus Aco001466.1.path1 R-ACO-1126799-2 Aco001466.1.path1 [cytosol] R-ACO-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119428 GDP-D-rhamnose biosynthesis none Ananas comosus Aco001466.1.path1 R-ACO-1126799-2 Aco001466.1.path1 [cytosol] R-ACO-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119563 UDP-D-xylose biosynthesis none Ananas comosus Aco001466.1.path1 R-ACO-1126799-2 Aco001466.1.path1 [cytosol] R-ACO-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Ananas comosus Aco001478.1.path1 R-ACO-9658613 Aco001478.1.path1 [plastid stroma] R-ACO-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119263 Arginine biosynthesis none Ananas comosus Aco001478.1.path1 R-ACO-9658613 Aco001478.1.path1 [plastid stroma] R-ACO-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119622 Arginine biosynthesis II (acetyl cycle) none Ananas comosus Aco001508.1.path1 R-ACO-9639217 Aco001508.1.path1 [plasma membrane] R-ACO-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9639136 Response to Aluminum stress none Ananas comosus Aco001526.1.path1 R-ACO-1127140 Aco001526.1.path1 [cytosol] R-ACO-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119403 Removal of superoxide radicals none Ananas comosus Aco001527.1.path1 R-ACO-9675423 Aco001527.1.path1 [nucleoplasm] R-ACO-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675508 Root elongation none Ananas comosus Aco001527.1.path1 R-ACO-9930290 MPK5 [nucleoplasm] R-ACO-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9766881 TF network involved in salinity response none Ananas comosus Aco001529.1.path1 R-ACO-5138505-2 Aco001529.1.path1 [plastid stroma] R-ACO-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119263 Arginine biosynthesis none Ananas comosus Aco001529.1.path1 R-ACO-5138505-2 Aco001529.1.path1 [plastid stroma] R-ACO-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119539 Ornithine biosynthesis none Ananas comosus Aco001529.1.path1 R-ACO-5138505-2 Aco001529.1.path1 [plastid stroma] R-ACO-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119622 Arginine biosynthesis II (acetyl cycle) none Ananas comosus Aco001530.1.path1 R-ACO-1126883 Aco001530.1.path1 [cytosol] R-ACO-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119389 Phenylalanine biosynthesis I none Ananas comosus Aco001536.1.path1 R-ACO-5654933-2 Aco001536.1.path1 [Golgi lumen] R-ACO-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5654909 Xylan biosynthesis none Ananas comosus Aco001563.1.path1 R-ACO-1129616 Aco001563.1.path1 [cytosol] R-ACO-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119300 Glycolipid desaturation none Ananas comosus Aco001566.1.path1 R-ACO-5138505 Aco001566.1.path1 [plastid stroma] R-ACO-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119263 Arginine biosynthesis none Ananas comosus Aco001566.1.path1 R-ACO-5138505 Aco001566.1.path1 [plastid stroma] R-ACO-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119539 Ornithine biosynthesis none Ananas comosus Aco001566.1.path1 R-ACO-5138505 Aco001566.1.path1 [plastid stroma] R-ACO-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119622 Arginine biosynthesis II (acetyl cycle) none Ananas comosus Aco001580.1.path1 R-ACO-1124944 Aco001580.1.path1 [plastid stroma] R-ACO-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119460 Isoleucine biosynthesis from threonine none Ananas comosus Aco001580.1.path1 R-ACO-1124944 Aco001580.1.path1 [plastid stroma] R-ACO-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119486 IAA biosynthesis I none Ananas comosus Aco001580.1.path1 R-ACO-1124944 Aco001580.1.path1 [plastid stroma] R-ACO-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119502 Allantoin degradation none Ananas comosus Aco001580.1.path1 R-ACO-1124944 Aco001580.1.path1 [plastid stroma] R-ACO-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119600 Valine biosynthesis none Ananas comosus Aco001613.1.path1 R-ACO-1124234 Aco001613.1.path1 [cytosol] R-ACO-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119436 Peptidoglycan biosynthesis I none Ananas comosus Aco001737.1.path1 R-ACO-6788172 Aco001737.1.path1 [nucleoplasm] R-ACO-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6788019 Salicylic acid signaling none Ananas comosus Aco001769.1.path1 R-ACO-8933856 Aco001769.1.path1 [nucleoplasm] R-ACO-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8933811 Circadian rhythm none Ananas comosus Aco001769.1.path1 R-ACO-8933748 Aco001769.1.path1 [cytosol] R-ACO-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8933811 Circadian rhythm none Ananas comosus Aco001769.1.path1 R-ACO-8933856 Aco001769.1.path1 [nucleoplasm] R-ACO-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8934036 Long day regulated expression of florigens none Ananas comosus Aco001769.1.path1 R-ACO-8933856 Aco001769.1.path1 [nucleoplasm] R-ACO-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9928995 Drought escape (DE) via ABA-dependent pathway none Ananas comosus Aco001828.1.path1 R-ACO-9639810-2 Aco001828.1.path1 [cell wall] R-ACO-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9639861 Development of root hair none Ananas comosus Aco001836.1.path1 R-ACO-5632301 Aco001836.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco001836.1.path1 R-ACO-5632301 Aco001836.1.path1 [nucleoplasm] R-ACO-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5654828 Strigolactone signaling none Ananas comosus Aco001836.1.path1 R-ACO-5632301 Aco001836.1.path1 [nucleoplasm] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco001837.1.path1 R-ACO-1126830-2 Aco001837.1.path1 [mitochondrial matrix] R-ACO-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119533 TCA cycle (plant) none Ananas comosus Aco001904.1.path1 R-ACO-1123477 Aco001904.1.path1 [cytosol] R-ACO-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119451 Xylose degradation none Ananas comosus Aco001973.1.path1 R-ACO-1129311 Aco001973.1.path1 [cytosol] R-ACO-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Ananas comosus Aco002071.1.path1 R-ACO-1127999 Aco002071.1.path1 [mitochondrial inner membrane] R-ACO-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119260 Cardiolipin biosynthesis none Ananas comosus Aco002111.1.path1 R-ACO-5149643 Aco002111.1.path1 [plastid stroma] R-ACO-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119519 Calvin cycle none Ananas comosus Aco002172.1.path1 R-ACO-1122632 Aco002172.1.path1 [cytosol] R-ACO-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119331 Cysteine biosynthesis I none Ananas comosus Aco002173.1.path1 R-ACO-9927822 Aco002173.1.path1 [nucleoplasm] R-ACO-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8934036 Long day regulated expression of florigens none Ananas comosus Aco002202.1.path1 R-ACO-9826669 OsYABBY6 [nucleoplasm] R-ACO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Ananas comosus Aco002232.1.path1 R-ACO-9025548 Aco002232.1.path1 [endoplasmic reticulum membrane] R-ACO-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119325 Sphingolipid metabolism none Ananas comosus Aco002250.1.path1 R-ACO-1130302 Aco002250.1.path1 [cytosol] R-ACO-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119451 Xylose degradation none Ananas comosus Aco002284.1.path1 R-ACO-9640694 Aco002284.1.path1 [nucleoplasm] R-ACO-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640882 Assembly of pre-replication complex none Ananas comosus Aco002284.1.path1 R-ACO-9640694 Aco002284.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco002297.1.path1 R-ACO-1129585 Aco002297.1.path1 [cytosol] R-ACO-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119265 Tetrahydrofolate biosynthesis I none Ananas comosus Aco002297.1.path1 R-ACO-1129585 Aco002297.1.path1 [cytosol] R-ACO-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119523 Tetrahydrofolate biosynthesis II none Ananas comosus Aco002309.1.path1 R-ACO-9675464 Aco002309.1.path1 [nucleoplasm] R-ACO-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9030654 Primary root development none Ananas comosus Aco002323.1.path1 R-ACO-9611465 Aco002323.1.path1 [nucleoplasm] R-ACO-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9611432 Recognition of fungal and bacterial pathogens and immunity response none Ananas comosus Aco002323.1.path1 R-ACO-9611445 Aco002323.1.path1 [nucleoplasm] R-ACO-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9611432 Recognition of fungal and bacterial pathogens and immunity response none Ananas comosus Aco002357.1.path1 R-ACO-5631958 Aco002357.1.path1 [cytosol] R-ACO-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119289 Arginine degradation none Ananas comosus Aco002357.1.path1 R-ACO-1122345 Aco002357.1.path1 [cytosol] R-ACO-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119318 Proline biosynthesis V (from arginine) none Ananas comosus Aco002357.1.path1 R-ACO-1122345 Aco002357.1.path1 [cytosol] R-ACO-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119631 Proline biosynthesis I none Ananas comosus Aco002403.1.path1 R-ACO-1124206 Aco002403.1.path1 [cytosol] R-ACO-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119403 Removal of superoxide radicals none Ananas comosus Aco002403.1.path1 R-ACO-1124206 Aco002403.1.path1 [cytosol] R-ACO-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9611432 Recognition of fungal and bacterial pathogens and immunity response none Ananas comosus Aco002502.1.path1 R-ACO-1126830 Aco002502.1.path1 [mitochondrial matrix] R-ACO-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119533 TCA cycle (plant) none Ananas comosus Aco002525.1.path1 R-ACO-9646016-2 Aco002525.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco002525.1.path1 R-ACO-9646016-2 Aco002525.1.path1 [nucleoplasm] R-ACO-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675885 Lagging strand synthesis none Ananas comosus Aco002547.1.path1 R-ACO-9025712 Aco002547.1.path1 [cytosol] R-ACO-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9025754 Mugineic acid biosynthesis none Ananas comosus Aco002548.1.path1 R-ACO-9826705 OSH71 [nucleoplasm] R-ACO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Ananas comosus Aco002570.1.path1 R-ACO-1129507 Aco002570.1.path1 [cytosol] R-ACO-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119452 Galactose degradation II none Ananas comosus Aco002617.1.path1 R-ACO-9675818 Aco002617.1.path1 [nucleoplasm] R-ACO-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675815 Leading strand synthesis none Ananas comosus Aco002625.1.path1 R-ACO-1126542 Aco002625.1.path1 [cytosol] R-ACO-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119523 Tetrahydrofolate biosynthesis II none Ananas comosus Aco002625.1.path1 R-ACO-1126542 Aco002625.1.path1 [cytosol] R-ACO-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119617 Folate polyglutamylation I none Ananas comosus Aco002635.1.path1 R-ACO-5679470 Aco002635.1.path1 [nucleoplasm] R-ACO-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5679411 Gibberellin signaling none Ananas comosus Aco002647.1.path1 R-ACO-1130304 Aco002647.1.path1 [cytosol] R-ACO-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119291 Nitrate assimilation none Ananas comosus Aco002684.1.path1 R-ACO-9826683 HSFB4A [nucleoplasm] R-ACO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Ananas comosus Aco002693.1.path1 R-ACO-1126380 Aco002693.1.path1 [cytosol] R-ACO-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119609 Phaseic acid biosynthesis none Ananas comosus Aco002732.1.path1 R-ACO-1128980 Aco002732.1.path1 [cytosol] R-ACO-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119586 Cyanate degradation none Ananas comosus Aco002739.1.path1 R-ACO-2960195 Aco002739.1.path1 [cytosol] R-ACO-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119410 Ascorbate biosynthesis none Ananas comosus Aco002739.1.path1 R-ACO-2960195 Aco002739.1.path1 [cytosol] R-ACO-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119570 Cytosolic glycolysis none Ananas comosus Aco002744.1.path1 R-ACO-2960195-2 Aco002744.1.path1 [cytosol] R-ACO-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119410 Ascorbate biosynthesis none Ananas comosus Aco002744.1.path1 R-ACO-2960195-2 Aco002744.1.path1 [cytosol] R-ACO-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119570 Cytosolic glycolysis none Ananas comosus Aco002748.1.path1 R-ACO-5679294 Aco002748.1.path1 [nucleoplasm] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco002770.1.path1 R-ACO-5632114-3 Aco002770.1.path1 [cytosol] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco002852.1.path1 R-ACO-1130308 Aco002852.1.path1 [plastid stroma] R-ACO-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119430 Chorismate biosynthesis none Ananas comosus Aco002874.1.path1 R-ACO-9025498 Aco002874.1.path1 [endoplasmic reticulum membrane] R-ACO-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119325 Sphingolipid metabolism none Ananas comosus Aco002886.1.path1 R-ACO-1122261 Aco002886.1.path1 [plastid stroma] R-ACO-1119602 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119602 Phytyl-PP biosynthesis none Ananas comosus Aco002886.1.path1 R-ACO-1122261 Aco002886.1.path1 [plastid stroma] R-ACO-1119605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119605 Chlorophyll a biosynthesis II none Ananas comosus Aco002916.1.path1 R-ACO-9684723 Aco002916.1.path1 [cytosol] R-ACO-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9609102 Flower development none Ananas comosus Aco002951.1.path1 R-ACO-1128637 Aco002951.1.path1 [chloroplast] R-ACO-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119494 Tryptophan biosynthesis none Ananas comosus Aco002955.1.path1 R-ACO-9658702 Aco002955.1.path1 [plastid stroma] R-ACO-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119297 Beta-alanine biosynthesis III none Ananas comosus Aco002967.1.path1 R-ACO-1125564 Aco002967.1.path1 [cytosol] R-ACO-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119291 Nitrate assimilation none Ananas comosus Aco002967.1.path1 R-ACO-1125564 Aco002967.1.path1 [cytosol] R-ACO-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119293 Glutamine biosynthesis I none Ananas comosus Aco002967.1.path1 R-ACO-1125564 Aco002967.1.path1 [cytosol] R-ACO-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119443 Ammonia assimilation cycle none Ananas comosus Aco002998.1.path1 R-ACO-9826604 Aco002998.1.path1 [nucleoplasm] R-ACO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Ananas comosus Aco003002.1.path1 R-ACO-5632316-2 Aco003002.1.path1 [cytosol] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco003009.1.path1 R-ACO-1122351 Aco003009.1.path1 [cytosol] R-ACO-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119354 Asparagine biosynthesis III none Ananas comosus Aco003009.1.path1 R-ACO-5633281 Aco003009.1.path1 [cytosol] R-ACO-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119495 Citrulline biosynthesis none Ananas comosus Aco003009.1.path1 R-ACO-1122351 Aco003009.1.path1 [cytosol] R-ACO-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119553 Asparagine biosynthesis none Ananas comosus Aco003031.1.path1 R-ACO-1128334 Aco003031.1.path1 [mitochondrial matrix] R-ACO-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119337 Proline degradation none Ananas comosus Aco003042.1.path1 R-ACO-9640767 Aco003042.1.path1 [nucleoplasm] R-ACO-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640882 Assembly of pre-replication complex none Ananas comosus Aco003042.1.path1 R-ACO-9640767 Aco003042.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco003042.1.path1 R-ACO-9640767 Aco003042.1.path1 [nucleoplasm] R-ACO-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675824 DNA replication Initiation none Ananas comosus Aco003139.1.path1 R-ACO-8987571 Aco003139.1.path1 [peroxisomal matrix] R-ACO-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119312 Photorespiration none Ananas comosus Aco003153.1.path1 R-ACO-9609569 Aco003153.1.path1 [cytosol] R-ACO-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9609573 Tricin biosynthesis none Ananas comosus Aco003156.1.path1 R-ACO-9609569-2 Aco003156.1.path1 [cytosol] R-ACO-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9609573 Tricin biosynthesis none Ananas comosus Aco003218.1.path1 R-ACO-1125550-2 Aco003218.1.path1 [cytosol] R-ACO-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119623 Acyl-CoA synthetase pathway none Ananas comosus Aco003240.1.path1 R-ACO-9675481 Aco003240.1.path1 [cytosol] R-ACO-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9030654 Primary root development none Ananas comosus Aco003272.1.path1 R-ACO-9675877 Aco003272.1.path1 [nucleoplasm] R-ACO-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675815 Leading strand synthesis none Ananas comosus Aco003287.1.path1 R-ACO-9645941 Aco003287.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco003321.1.path1 R-ACO-1122242 Aco003321.1.path1 [cytosol] R-ACO-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119267 Phenylalanine degradation III none Ananas comosus Aco003323.1.path1 R-ACO-1126436 Aco003323.1.path1 [cytosol] R-ACO-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119615 Mevalonate pathway none Ananas comosus Aco003332.1.path1 R-ACO-1125275 Aco003332.1.path1 [cytosol] R-ACO-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119629 Thiamine biosynthesis none Ananas comosus Aco003358.1.path1 R-ACO-1125309-2 Aco003358.1.path1 [nucleoplasm] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco003420.1.path1 R-ACO-1127527 Aco003420.1.path1 [cytosol] R-ACO-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Ananas comosus Aco003438.1.path1 R-ACO-1128322 Aco003438.1.path1 [cytosol] R-ACO-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119384 NAD biosynthesis I (from aspartate) none Ananas comosus Aco003442.1.path1 R-ACO-1122545 Aco003442.1.path1 [cytosol] R-ACO-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119331 Cysteine biosynthesis I none Ananas comosus Aco003466.1.path1 R-ACO-1123430 Aco003466.1.path1 [cytosol] R-ACO-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119437 Glutathione redox reactions I none Ananas comosus Aco003488.1.path1 R-ACO-5138489 Aco003488.1.path1 [plastid stroma] R-ACO-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119263 Arginine biosynthesis none Ananas comosus Aco003488.1.path1 R-ACO-1127893 Aco003488.1.path1 [cytosol] R-ACO-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119444 Canavanine biosynthesis none Ananas comosus Aco003488.1.path1 R-ACO-5138489 Aco003488.1.path1 [plastid stroma] R-ACO-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119622 Arginine biosynthesis II (acetyl cycle) none Ananas comosus Aco003488.1.path1 R-ACO-5138489 Aco003488.1.path1 [plastid stroma] R-ACO-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5633340 Citrulline-nitric oxide cycle none Ananas comosus Aco003508.1.path1 R-ACO-9645947 Aco003508.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco003508.1.path1 R-ACO-9645947 Aco003508.1.path1 [nucleoplasm] R-ACO-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675815 Leading strand synthesis none Ananas comosus Aco003508.1.path1 R-ACO-9645947 Aco003508.1.path1 [nucleoplasm] R-ACO-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675824 DNA replication Initiation none Ananas comosus Aco003508.1.path1 R-ACO-9645947 Aco003508.1.path1 [nucleoplasm] R-ACO-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675885 Lagging strand synthesis none Ananas comosus Aco003511.1.path1 R-ACO-1122785 Aco003511.1.path1 [cytosol] R-ACO-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119273 Lysine biosynthesis I none Ananas comosus Aco003511.1.path1 R-ACO-1126726 Aco003511.1.path1 [cytosol] R-ACO-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119273 Lysine biosynthesis I none Ananas comosus Aco003511.1.path1 R-ACO-1122785 Aco003511.1.path1 [cytosol] R-ACO-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119283 Lysine biosynthesis II none Ananas comosus Aco003511.1.path1 R-ACO-1126726 Aco003511.1.path1 [cytosol] R-ACO-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119283 Lysine biosynthesis II none Ananas comosus Aco003511.1.path1 R-ACO-1122785 Aco003511.1.path1 [cytosol] R-ACO-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119570 Cytosolic glycolysis none Ananas comosus Aco003571.1.path1 R-ACO-1127151 Aco003571.1.path1 [cytosol] R-ACO-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119384 NAD biosynthesis I (from aspartate) none Ananas comosus Aco003606.1.path1 R-ACO-9658676 Aco003606.1.path1 [cytosol] R-ACO-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119567 Beta-alanine biosynthesis I none Ananas comosus Aco003614.1.path1 R-ACO-9025471-2 Aco003614.1.path1 [endoplasmic reticulum membrane] R-ACO-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119325 Sphingolipid metabolism none Ananas comosus Aco003614.1.path1 R-ACO-1127934-2 Aco003614.1.path1 [cytosol] R-ACO-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119610 Biotin biosynthesis II none Ananas comosus Aco003615.1.path1 R-ACO-5608203-2 Aco003615.1.path1 [nucleoplasm] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco003615.1.path1 R-ACO-5608203-2 Aco003615.1.path1 [nucleoplasm] R-ACO-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9608575 Reproductive meristem phase change none Ananas comosus Aco003615.1.path1 R-ACO-9658968-2 Aco003615.1.path1 [cytosol] R-ACO-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9608575 Reproductive meristem phase change none Ananas comosus Aco003655.1.path1 R-ACO-1127382 Aco003655.1.path1 [cytosol] R-ACO-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119460 Isoleucine biosynthesis from threonine none Ananas comosus Aco003655.1.path1 R-ACO-1127382 Aco003655.1.path1 [cytosol] R-ACO-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119600 Valine biosynthesis none Ananas comosus Aco003669.1.path1 R-ACO-9646043 Aco003669.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco003669.1.path1 R-ACO-9646043 Aco003669.1.path1 [nucleoplasm] R-ACO-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675815 Leading strand synthesis none Ananas comosus Aco003669.1.path1 R-ACO-9646043 Aco003669.1.path1 [nucleoplasm] R-ACO-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675824 DNA replication Initiation none Ananas comosus Aco003669.1.path1 R-ACO-9646043 Aco003669.1.path1 [nucleoplasm] R-ACO-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675885 Lagging strand synthesis none Ananas comosus Aco003691.1.path1 R-ACO-9640753 Aco003691.1.path1 [nucleoplasm] R-ACO-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640882 Assembly of pre-replication complex none Ananas comosus Aco003691.1.path1 R-ACO-9640753 Aco003691.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco003691.1.path1 R-ACO-9640753 Aco003691.1.path1 [nucleoplasm] R-ACO-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675824 DNA replication Initiation none Ananas comosus Aco003696.1.path1 R-ACO-9612406 Aco003696.1.path1 [mitochondrial matrix] R-ACO-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119612 Cysteine degradation none Ananas comosus Aco003743.1.path1 R-ACO-9916125 Aco003743.1.path1 [nucleoplasm] R-ACO-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9916190 Root angle formation: elongation and curvature response none Ananas comosus Aco003743.1.path1 R-ACO-9916231 Aco003743.1.path1 [cytosol] R-ACO-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9916190 Root angle formation: elongation and curvature response none Ananas comosus Aco003743.1.path1 R-ACO-9916199 phospho-Aco003743.1.path1 [cytosol] R-ACO-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9916190 Root angle formation: elongation and curvature response none Ananas comosus Aco003764.1.path1 R-ACO-1127723 Aco003764.1.path1 [cytosol] R-ACO-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119331 Cysteine biosynthesis I none Ananas comosus Aco003777.1.path1 R-ACO-9826620 HOX12/ OsGT1 [nucleoplasm] R-ACO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Ananas comosus Aco003777.1.path1 R-ACO-9826620 HOX12/ OsGT1 [nucleoplasm] R-ACO-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Ananas comosus Aco003778.1.path1 R-ACO-5632334 Aco003778.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco003778.1.path1 R-ACO-5632197 phospho-Aco003778.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco003778.1.path1 R-ACO-5632183 phospho-Aco003778.1.path1 [cytosol] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco003778.1.path1 R-ACO-5632334 Aco003778.1.path1 [nucleoplasm] R-ACO-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5679411 Gibberellin signaling none Ananas comosus Aco003806.1.path1 R-ACO-5654859 Aco003806.1.path1 [nucleoplasm] R-ACO-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5654828 Strigolactone signaling none Ananas comosus Aco003806.1.path1 R-ACO-5654859 Aco003806.1.path1 [nucleoplasm] R-ACO-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Ananas comosus Aco003831.1.path1 R-ACO-1123819-2 Aco003831.1.path1 [plastid stroma] R-ACO-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119464 Methylerythritol phosphate pathway none Ananas comosus Aco003857.1.path1 R-ACO-1128178 Aco003857.1.path1 [cytosol] R-ACO-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119322 Leucodelphinidin biosynthesis none Ananas comosus Aco003857.1.path1 R-ACO-1128178 Aco003857.1.path1 [cytosol] R-ACO-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Ananas comosus Aco003857.1.path1 R-ACO-9609575 Aco003857.1.path1 [endoplasmic reticulum membrane] R-ACO-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9609573 Tricin biosynthesis none Ananas comosus Aco003871.1.path1 R-ACO-9681886-2 Aco003871.1.path1 [cytosol] R-ACO-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119574 UDP-L-arabinose biosynthesis and transport none Ananas comosus Aco003885.1.path1 R-ACO-1128178-2 Aco003885.1.path1 [cytosol] R-ACO-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119322 Leucodelphinidin biosynthesis none Ananas comosus Aco003885.1.path1 R-ACO-1128178-2 Aco003885.1.path1 [cytosol] R-ACO-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Ananas comosus Aco003885.1.path1 R-ACO-9609575-2 Aco003885.1.path1 [endoplasmic reticulum membrane] R-ACO-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9609573 Tricin biosynthesis none Ananas comosus Aco003903.1.path1 R-ACO-6787141 Aco003903.1.path1 [nucleoplasm] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco003977.1.path1 R-ACO-1123433 Aco003977.1.path1 [cytosol] R-ACO-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119332 Jasmonic acid biosynthesis none Ananas comosus Aco003977.1.path1 R-ACO-1123433 Aco003977.1.path1 [cytosol] R-ACO-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119618 13-LOX and 13-HPL pathway none Ananas comosus Aco003980.1.path1 R-ACO-1123534 Aco003980.1.path1 [cytosol] R-ACO-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119438 Secologanin and strictosidine biosynthesis none Ananas comosus Aco003996.1.path1 R-ACO-6788201-2 Aco003996.1.path1 [nucleoplasm] R-ACO-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6788019 Salicylic acid signaling none Ananas comosus Aco004017.1.path1 R-ACO-9640701 Aco004017.1.path1 [nucleoplasm] R-ACO-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640882 Assembly of pre-replication complex none Ananas comosus Aco004017.1.path1 R-ACO-9640701 Aco004017.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco004045.1.path1 R-ACO-5608140 Aco004045.1.path1 [nucleoplasm] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco004054.1.path1 R-ACO-9826680 Aco004054.1.path1 [nucleoplasm] R-ACO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Ananas comosus Aco004065.1.path1 R-ACO-9766892 SAPK1 [nucleoplasm] R-ACO-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9766881 TF network involved in salinity response none Ananas comosus Aco004066.1.path1 R-ACO-1122295 Aco004066.1.path1 [cytosol] R-ACO-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119353 Linear furanocoumarin biosynthesis none Ananas comosus Aco004069.1.path1 R-ACO-1129934-2 Aco004069.1.path1 [plastid stroma] R-ACO-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119430 Chorismate biosynthesis none Ananas comosus Aco004106.1.path1 R-ACO-1129964 Aco004106.1.path1 [cytosol] R-ACO-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119378 Myo-inositol biosynthesis none Ananas comosus Aco004106.1.path1 R-ACO-1129964 Aco004106.1.path1 [cytosol] R-ACO-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119434 Phytic acid biosynthesis (lipid-independent) none Ananas comosus Aco004112.1.path1 R-ACO-5606521 Aco004112.1.path1 [plastid stroma] R-ACO-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119419 Lysine biosynthesis VI none Ananas comosus Aco004143.1.path1 R-ACO-9640752 Aco004143.1.path1 [nucleoplasm] R-ACO-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640882 Assembly of pre-replication complex none Ananas comosus Aco004143.1.path1 R-ACO-9640752 Aco004143.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco004162.1.path1 R-ACO-1122934 Aco004162.1.path1 [plastid stroma] R-ACO-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119519 Calvin cycle none Ananas comosus Aco004177.1.path1 R-ACO-8986767 Aco004177.1.path1 [plastid] R-ACO-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8986768 Anther and pollen development none Ananas comosus Aco004220.1.path1 R-ACO-1129781-2 Aco004220.1.path1 [chloroplast] R-ACO-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119494 Tryptophan biosynthesis none Ananas comosus Aco004224.1.path1 R-ACO-9682506-2 Aco004224.1.path1 [cytosol] R-ACO-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119410 Ascorbate biosynthesis none Ananas comosus Aco004235.1.path1 R-ACO-1128257 Aco004235.1.path1 [plastid stroma] R-ACO-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119529 Sulfate activation for sulfonation none Ananas comosus Aco004255.1.path1 R-ACO-1127908 Aco004255.1.path1 [cytosol] R-ACO-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119349 S-methylmethionine cycle none Ananas comosus Aco004255.1.path1 R-ACO-1127908 Aco004255.1.path1 [cytosol] R-ACO-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119400 Methionine biosynthesis II none Ananas comosus Aco004305.1.path1 R-ACO-9675827 Aco004305.1.path1 [nucleoplasm] R-ACO-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675782 Maturation none Ananas comosus Aco004305.1.path1 R-ACO-9675827 Aco004305.1.path1 [nucleoplasm] R-ACO-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675815 Leading strand synthesis none Ananas comosus Aco004305.1.path1 R-ACO-9675827 Aco004305.1.path1 [nucleoplasm] R-ACO-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675885 Lagging strand synthesis none Ananas comosus Aco004314.1.path1 R-ACO-1127442 Aco004314.1.path1 [cytosol] R-ACO-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119281 Aspartate biosynthesis I none Ananas comosus Aco004314.1.path1 R-ACO-5632001 Aco004314.1.path1 [plastid stroma] R-ACO-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119553 Asparagine biosynthesis none Ananas comosus Aco004326.1.path1 R-ACO-5632133 Aco004326.1.path1 [cytosol] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco004328.1.path1 R-ACO-9675391 Aco004328.1.path1 [nucleoplasm] R-ACO-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675508 Root elongation none Ananas comosus Aco004349.1.path1 R-ACO-1128071 Aco004349.1.path1 [mitochondrial matrix] R-ACO-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119533 TCA cycle (plant) none Ananas comosus Aco004410.1.path1 R-ACO-1129723 Aco004410.1.path1 [chloroplast] R-ACO-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119494 Tryptophan biosynthesis none Ananas comosus Aco004435.1.path1 R-ACO-1124613 Aco004435.1.path1 [plasma membrane] R-ACO-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119314 Cellulose biosynthesis none Ananas comosus Aco004482.1.path1 R-ACO-6787934 Aco004482.1.path1 [nucleoplasm] R-ACO-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6788019 Salicylic acid signaling none Ananas comosus Aco004512.1.path1 R-ACO-1122601 Aco004512.1.path1 [mitochondrial inner membrane] R-ACO-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119533 TCA cycle (plant) none Ananas comosus Aco004563.1.path1 R-ACO-9675860 Aco004563.1.path1 [nucleoplasm] R-ACO-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675824 DNA replication Initiation none Ananas comosus Aco004570.1.path1 R-ACO-1129921 Aco004570.1.path1 [cytosol] R-ACO-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119428 GDP-D-rhamnose biosynthesis none Ananas comosus Aco004570.1.path1 R-ACO-1129921 Aco004570.1.path1 [cytosol] R-ACO-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Ananas comosus Aco004592.1.path1 R-ACO-1124138 Aco004592.1.path1 [cytosol] R-ACO-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119394 Pantothenate and coenzyme A biosynthesis III none Ananas comosus Aco004660.1.path1 R-ACO-9640763 Aco004660.1.path1 [nucleoplasm] R-ACO-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640887 G1/S transition none Ananas comosus Aco004660.1.path1 R-ACO-9640885 phospho-Aco004660.1.path1 [nucleoplasm] R-ACO-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640887 G1/S transition none Ananas comosus Aco004695.1.path1 R-ACO-1124791 Aco004695.1.path1 [cytosol] R-ACO-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119610 Biotin biosynthesis II none Ananas comosus Aco004698.1.path1 R-ACO-1129136 Aco004698.1.path1 [plastid stroma] R-ACO-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Ananas comosus Aco004768.1.path1 R-ACO-9639010 Aco004768.1.path1 [cytosol] R-ACO-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119434 Phytic acid biosynthesis (lipid-independent) none Ananas comosus Aco004813.1.path1 R-ACO-9639016 Aco004813.1.path1 [cytosol] R-ACO-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119410 Ascorbate biosynthesis none Ananas comosus Aco004813.1.path1 R-ACO-9639016 Aco004813.1.path1 [cytosol] R-ACO-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119434 Phytic acid biosynthesis (lipid-independent) none Ananas comosus Aco004829.1.path1 R-ACO-5654755 Aco004829.1.path1 [cytosol] R-ACO-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119393 Asparagine degradation I none Ananas comosus Aco004839.1.path1 R-ACO-8934299 Aco004839.1.path1 [nucleoplasm] R-ACO-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8934036 Long day regulated expression of florigens none Ananas comosus Aco004839.1.path1 R-ACO-8934299 Aco004839.1.path1 [nucleoplasm] R-ACO-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8934257 Transition from vegetative to reproductive shoot apical meristem none Ananas comosus Aco004839.1.path1 R-ACO-8934299 Aco004839.1.path1 [nucleoplasm] R-ACO-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9609102 Flower development none Ananas comosus Aco004861.1.path1 R-ACO-9681886-3 Aco004861.1.path1 [cytosol] R-ACO-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119574 UDP-L-arabinose biosynthesis and transport none Ananas comosus Aco004874.1.path1 R-ACO-1126095 Aco004874.1.path1 [cytosol] R-ACO-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119389 Phenylalanine biosynthesis I none Ananas comosus Aco004913.1.path1 R-ACO-8879027 Aco004913.1.path1 [nucleoplasm] R-ACO-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8879007 Response to cold temperature none Ananas comosus Aco004925.1.path1 R-ACO-4415007 Aco004925.1.path1 [cytosol] R-ACO-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-3899351 Abscisic acid (ABA) mediated signaling none Ananas comosus Aco004925.1.path1 R-ACO-4415016 phospho-Aco004925.1.path1 [cytosol] R-ACO-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-3899351 Abscisic acid (ABA) mediated signaling none Ananas comosus Aco004925.1.path1 R-ACO-4415007 Aco004925.1.path1 [cytosol] R-ACO-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9639861 Development of root hair none Ananas comosus Aco004930.1.path1 R-ACO-5138500 Aco004930.1.path1 [plastid stroma] R-ACO-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119263 Arginine biosynthesis none Ananas comosus Aco004930.1.path1 R-ACO-1129397 Aco004930.1.path1 [cytosol] R-ACO-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119273 Lysine biosynthesis I none Ananas comosus Aco004930.1.path1 R-ACO-1129397 Aco004930.1.path1 [cytosol] R-ACO-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119283 Lysine biosynthesis II none Ananas comosus Aco004930.1.path1 R-ACO-1129397 Aco004930.1.path1 [cytosol] R-ACO-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119295 Homoserine biosynthesis none Ananas comosus Aco004930.1.path1 R-ACO-5138500 Aco004930.1.path1 [plastid stroma] R-ACO-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119539 Ornithine biosynthesis none Ananas comosus Aco004930.1.path1 R-ACO-5138500 Aco004930.1.path1 [plastid stroma] R-ACO-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119622 Arginine biosynthesis II (acetyl cycle) none Ananas comosus Aco004983.1.path1 R-ACO-9826652 OSH15 [nucleoplasm] R-ACO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Ananas comosus Aco004989.1.path1 R-ACO-1125834 Aco004989.1.path1 [cytosol] R-ACO-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119379 Flavin biosynthesis none Ananas comosus Aco005004.1.path1 R-ACO-1129247 Aco005004.1.path1 [mitochondrial inner membrane] R-ACO-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119533 TCA cycle (plant) none Ananas comosus Aco005007.1.path1 R-ACO-1124742 Aco005007.1.path1 [cytosol] R-ACO-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119410 Ascorbate biosynthesis none Ananas comosus Aco005007.1.path1 R-ACO-1124742 Aco005007.1.path1 [cytosol] R-ACO-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119570 Cytosolic glycolysis none Ananas comosus Aco005014.1.path1 R-ACO-6788026 Aco005014.1.path1 [cytosol] R-ACO-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6788019 Salicylic acid signaling none Ananas comosus Aco005016.1.path1 R-ACO-9626337 Aco005016.1.path1 [Golgi-associated vesicle] R-ACO-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9626305 Regulatory network of nutrient accumulation none Ananas comosus Aco005040.1.path1 R-ACO-1127274 Aco005040.1.path1 [cytosol] R-ACO-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119612 Cysteine degradation none Ananas comosus Aco005104.1.path1 R-ACO-5631953 Aco005104.1.path1 [mitochondrial matrix] R-ACO-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119289 Arginine degradation none Ananas comosus Aco005104.1.path1 R-ACO-1124214 Aco005104.1.path1 [cytosol] R-ACO-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119318 Proline biosynthesis V (from arginine) none Ananas comosus Aco005104.1.path1 R-ACO-1124214 Aco005104.1.path1 [cytosol] R-ACO-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119610 Biotin biosynthesis II none Ananas comosus Aco005107.1.path1 R-ACO-8987473 Aco005107.1.path1 [peroxisomal matrix] R-ACO-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119312 Photorespiration none Ananas comosus Aco005107.1.path1 R-ACO-1124984 Aco005107.1.path1 [cytosol] R-ACO-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119596 Glutamate biosynthesis I none Ananas comosus Aco005160.1.path1 R-ACO-1125151 Aco005160.1.path1 [cytosol] R-ACO-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119400 Methionine biosynthesis II none Ananas comosus Aco005160.1.path1 R-ACO-1125151 Aco005160.1.path1 [cytosol] R-ACO-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119501 S-adenosyl-L-methionine cycle none Ananas comosus Aco005201.1.path1 R-ACO-1128594 Aco005201.1.path1 [cytosol] R-ACO-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119349 S-methylmethionine cycle none Ananas comosus Aco005201.1.path1 R-ACO-1128594 Aco005201.1.path1 [cytosol] R-ACO-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119400 Methionine biosynthesis II none Ananas comosus Aco005211.1.path1 R-ACO-1127705 Aco005211.1.path1 [plastid stroma] R-ACO-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119519 Calvin cycle none Ananas comosus Aco005213.1.path1 R-ACO-1127705-2 Aco005213.1.path1 [plastid stroma] R-ACO-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119519 Calvin cycle none Ananas comosus Aco005248.1.path1 R-ACO-9658563 Aco005248.1.path1 [endoplasmic reticulum lumen] R-ACO-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119502 Allantoin degradation none Ananas comosus Aco005280.1.path1 R-ACO-6787127 Aco005280.1.path1 [nucleoplasm] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco005280.1.path1 R-ACO-6787052 Aco005280.1.path1 [cytosol] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco005349.1.path1 R-ACO-1123482 Aco005349.1.path1 [plastid stroma] R-ACO-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119367 Polyisoprenoid biosynthesis none Ananas comosus Aco005385.1.path1 R-ACO-4752547 Aco005385.1.path1 [plastid stroma] R-ACO-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119498 Phylloquinone biosynthesis none Ananas comosus Aco005402.1.path1 R-ACO-1130327 Aco005402.1.path1 [cytosol] R-ACO-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119586 Cyanate degradation none Ananas comosus Aco005423.1.path1 R-ACO-1128126 Aco005423.1.path1 [endosome] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco005423.1.path1 R-ACO-5679348 Aco005423.1.path1 [plasma membrane] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco005446.1.path1 R-ACO-1126875 Aco005446.1.path1 [cytosol] R-ACO-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119486 IAA biosynthesis I none Ananas comosus Aco005530.1.path1 R-ACO-6787184 Aco005530.1.path1 [cytosol] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco005565.1.path1 R-ACO-9607105 Aco005565.1.path1 [mitochondrion] R-ACO-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9607185 Generation of superoxide radicals none Ananas comosus Aco005593.1.path1 R-ACO-5632315 Aco005593.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco005593.1.path1 R-ACO-5632284 phospho-Aco005593.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco005593.1.path1 R-ACO-5632277 phospho-Aco005593.1.path1 [cytosol] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco005593.1.path1 R-ACO-5632315 Aco005593.1.path1 [nucleoplasm] R-ACO-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5679411 Gibberellin signaling none Ananas comosus Aco005634.1.path1 R-ACO-1125997 Aco005634.1.path1 [nucleoplasm] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco005634.1.path1 R-ACO-1125997 Aco005634.1.path1 [nucleoplasm] R-ACO-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9030680 Crown root development none Ananas comosus Aco005652.1.path1 R-ACO-9826609 Aco005652.1.path1 [nucleoplasm] R-ACO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Ananas comosus Aco005660.1.path1 R-ACO-1129175 Aco005660.1.path1 [amyloplast] R-ACO-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119477 Starch biosynthesis none Ananas comosus Aco005699.1.path1 R-ACO-1129466 Aco005699.1.path1 [cytosol] R-ACO-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119449 Carotenoid biosynthesis none Ananas comosus Aco005700.1.path1 R-ACO-9608693 Aco005700.1.path1 [cytosol] R-ACO-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9608575 Reproductive meristem phase change none Ananas comosus Aco005710.1.path1 R-ACO-8858063 Aco005710.1.path1 [plasma membrane] R-ACO-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8858053 Polar auxin transport none Ananas comosus Aco005731.1.path1 R-ACO-4415101 Aco005731.1.path1 [cytosol] R-ACO-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-3899351 Abscisic acid (ABA) mediated signaling none Ananas comosus Aco005754.1.path1 R-ACO-9658664 Aco005754.1.path1 [plasma membrane] R-ACO-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119567 Beta-alanine biosynthesis I none Ananas comosus Aco005759.1.path1 R-ACO-5679401 Aco005759.1.path1 [nucleoplasm] R-ACO-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5679411 Gibberellin signaling none Ananas comosus Aco005839.1.path1 R-ACO-6787238 Aco005839.1.path1 [nucleoplasm] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco005874.1.path1 R-ACO-8987557 Aco005874.1.path1 [mitochondrial matrix] R-ACO-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119312 Photorespiration none Ananas comosus Aco005893.1.path1 R-ACO-3899348 Aco005893.1.path1 [cytosol] R-ACO-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-3899351 Abscisic acid (ABA) mediated signaling none Ananas comosus Aco005893.1.path1 R-ACO-3899348 Aco005893.1.path1 [cytosol] R-ACO-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9639861 Development of root hair none Ananas comosus Aco005920.1.path1 R-ACO-9608693-2 Aco005920.1.path1 [cytosol] R-ACO-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9608575 Reproductive meristem phase change none Ananas comosus Aco005955.1.path1 R-ACO-1128798 Aco005955.1.path1 [cytosol] R-ACO-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119331 Cysteine biosynthesis I none Ananas comosus Aco006002.1.path1 R-ACO-5367761 Aco006002.1.path1 [plastid stroma] R-ACO-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5367729 Strigolactone biosynthesis none Ananas comosus Aco006033.1.path1 R-ACO-1123733 Aco006033.1.path1 [cytosol] R-ACO-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119484 Folate polyglutamylation II none Ananas comosus Aco006039.1.path1 R-ACO-1124491 Aco006039.1.path1 [plasma membrane] R-ACO-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119314 Cellulose biosynthesis none Ananas comosus Aco006060.1.path1 R-ACO-1127526 Aco006060.1.path1 [cytosol] R-ACO-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119332 Jasmonic acid biosynthesis none Ananas comosus Aco006097.1.path1 R-ACO-1129859 Aco006097.1.path1 [chloroplast stroma] R-ACO-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119443 Ammonia assimilation cycle none Ananas comosus Aco006097.1.path1 R-ACO-5606382 Aco006097.1.path1 [plastid stroma] R-ACO-1119535 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119535 Glutamate biosynthesis IV none Ananas comosus Aco006122.1.path1 R-ACO-1128071-2 Aco006122.1.path1 [mitochondrial matrix] R-ACO-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119533 TCA cycle (plant) none Ananas comosus Aco006174.1.path1 R-ACO-1127292 Aco006174.1.path1 [plastid stroma] R-ACO-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Ananas comosus Aco006199.1.path1 R-ACO-1127562 Aco006199.1.path1 [amyloplast] R-ACO-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119477 Starch biosynthesis none Ananas comosus Aco006199.1.path1 R-ACO-1130466 Aco006199.1.path1 [cytosol] R-ACO-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119477 Starch biosynthesis none Ananas comosus Aco006229.1.path1 R-ACO-9612372 Aco006229.1.path1 [mitochondrial matrix] R-ACO-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119612 Cysteine degradation none Ananas comosus Aco006244.1.path1 R-ACO-9640782-2 Aco006244.1.path1 [nucleoplasm] R-ACO-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640882 Assembly of pre-replication complex none Ananas comosus Aco006314.1.path1 R-ACO-1127928 Aco006314.1.path1 [cytosol] R-ACO-1119595 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119595 Mannose degradation none Ananas comosus Aco006314.1.path1 R-ACO-1127928 Aco006314.1.path1 [cytosol] R-ACO-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119601 Trehalose degradation II none Ananas comosus Aco006314.1.path1 R-ACO-1127928 Aco006314.1.path1 [cytosol] R-ACO-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119628 GDP-mannose metabolism none Ananas comosus Aco006319.1.path1 R-ACO-9025338 Aco006319.1.path1 [cytosol] R-ACO-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119402 Phospholipid biosynthesis I none Ananas comosus Aco006349.1.path1 R-ACO-1126115 Aco006349.1.path1 [cytosol] R-ACO-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119452 Galactose degradation II none Ananas comosus Aco006349.1.path1 R-ACO-1126115 Aco006349.1.path1 [cytosol] R-ACO-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119465 Sucrose biosynthesis none Ananas comosus Aco006355.1.path1 R-ACO-9646016-3 Aco006355.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco006355.1.path1 R-ACO-9646016-3 Aco006355.1.path1 [nucleoplasm] R-ACO-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675885 Lagging strand synthesis none Ananas comosus Aco006386.1.path1 R-ACO-9826674-2 Aco006386.1.path1 [nucleoplasm] R-ACO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Ananas comosus Aco006516.1.path1 R-ACO-1128906 Aco006516.1.path1 [cytosol] R-ACO-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119444 Canavanine biosynthesis none Ananas comosus Aco006521.1.path1 R-ACO-1125406 Aco006521.1.path1 [cytosol] R-ACO-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119418 Suberin biosynthesis none Ananas comosus Aco006539.1.path1 R-ACO-8858085 Aco006539.1.path1 [plasma membrane] R-ACO-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8858053 Polar auxin transport none Ananas comosus Aco006539.1.path1 R-ACO-8858085 Aco006539.1.path1 [plasma membrane] R-ACO-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9924494 Gravity sensing and statolith sedimentation none Ananas comosus Aco006539.1.path1 R-ACO-9928298 PIN2 [endosome] R-ACO-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9924494 Gravity sensing and statolith sedimentation none Ananas comosus Aco006586.1.path1 R-ACO-1129846 Aco006586.1.path1 [mitochondrion] R-ACO-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119337 Proline degradation none Ananas comosus Aco006586.1.path1 R-ACO-1129846 Aco006586.1.path1 [mitochondrion] R-ACO-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119458 Glutamate degradation none Ananas comosus Aco006595.1.path1 R-ACO-1125187 Aco006595.1.path1 [cytosol] R-ACO-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119276 Choline biosynthesis III none Ananas comosus Aco006605.1.path1 R-ACO-9026148 Aco006605.1.path1 [mitochondrion] R-ACO-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119458 Glutamate degradation none Ananas comosus Aco006605.1.path1 R-ACO-1130288 Aco006605.1.path1 [cytosol] R-ACO-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119610 Biotin biosynthesis II none Ananas comosus Aco006606.1.path1 R-ACO-5149657 Aco006606.1.path1 [plastid stroma] R-ACO-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119519 Calvin cycle none Ananas comosus Aco006606.1.path1 R-ACO-1129239 Aco006606.1.path1 [cytosol] R-ACO-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119570 Cytosolic glycolysis none Ananas comosus Aco006623.1.path1 R-ACO-5632129 Aco006623.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco006706.1.path1 R-ACO-9826681-2 EREBP129 [nucleoplasm] R-ACO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Ananas comosus Aco006735.1.path1 R-ACO-6786999 Aco006735.1.path1 [nucleoplasm] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco006741.1.path1 R-ACO-1125734 Aco006741.1.path1 [cytosol] R-ACO-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119281 Aspartate biosynthesis I none Ananas comosus Aco006741.1.path1 R-ACO-5632000 Aco006741.1.path1 [plastid stroma] R-ACO-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119553 Asparagine biosynthesis none Ananas comosus Aco006781.1.path1 R-ACO-9640783 Aco006781.1.path1 [nucleoplasm] R-ACO-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640760 G1 phase none Ananas comosus Aco006842.1.path1 R-ACO-8854108 Aco006842.1.path1 [cytosol] R-ACO-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119556 Choline biosynthesis I none Ananas comosus Aco006907.1.path1 R-ACO-1128385-2 Aco006907.1.path1 [nucleoplasm] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco006959.1.path1 R-ACO-1129113 Aco006959.1.path1 [cytosol] R-ACO-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119298 Glutathione redox reactions II none Ananas comosus Aco006959.1.path1 R-ACO-1129113 Aco006959.1.path1 [cytosol] R-ACO-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119437 Glutathione redox reactions I none Ananas comosus Aco006987.1.path1 R-ACO-1130235-4 Aco006987.1.path1 [cytosol] R-ACO-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119261 Salicylate biosynthesis none Ananas comosus Aco006987.1.path1 R-ACO-1130235-4 Aco006987.1.path1 [cytosol] R-ACO-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119418 Suberin biosynthesis none Ananas comosus Aco006987.1.path1 R-ACO-1130235-4 Aco006987.1.path1 [cytosol] R-ACO-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119582 Phenylpropanoid biosynthesis, initial reactions none Ananas comosus Aco006995.1.path1 R-ACO-1124778 Aco006995.1.path1 [plastid stroma] R-ACO-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119464 Methylerythritol phosphate pathway none Ananas comosus Aco007022.1.path1 R-ACO-9639874-2 Aco007022.1.path1 [plasma membrane] R-ACO-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9639861 Development of root hair none Ananas comosus Aco007047.1.path1 R-ACO-9916309 CPK3 [plasma membrane] R-ACO-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9916190 Root angle formation: elongation and curvature response none Ananas comosus Aco007091.1.path1 R-ACO-5633270-2 Aco007091.1.path1 [cytosol] R-ACO-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119495 Citrulline biosynthesis none Ananas comosus Aco007099.1.path1 R-ACO-1129539 Aco007099.1.path1 [cytosol] R-ACO-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119610 Biotin biosynthesis II none Ananas comosus Aco007102.1.path1 R-ACO-9675399 Aco007102.1.path1 [nucleoplasm] R-ACO-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9030654 Primary root development none Ananas comosus Aco007145.1.path1 R-ACO-8868904 Aco007145.1.path1 [endoplasmic reticulum membrane] R-ACO-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8868949 Intracellular auxin transport none Ananas comosus Aco007216.1.path1 R-ACO-6788041 Aco007216.1.path1 [nucleoplasm] R-ACO-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6788019 Salicylic acid signaling none Ananas comosus Aco007241.1.path1 R-ACO-1126996 Aco007241.1.path1 [cytosol] R-ACO-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119316 Phenylpropanoid biosynthesis none Ananas comosus Aco007244.1.path1 R-ACO-4723690 Aco007244.1.path1 [plastid stroma] R-ACO-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119464 Methylerythritol phosphate pathway none Ananas comosus Aco007297.1.path1 R-ACO-1127695 Aco007297.1.path1 [plastid stroma] R-ACO-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119430 Chorismate biosynthesis none Ananas comosus Aco007299.1.path1 R-ACO-9920304 Aco007299.1.path1 [nucleoplasm] R-ACO-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8934108 Short day regulated expression of florigens none Ananas comosus Aco007306.1.path1 R-ACO-1127089 Aco007306.1.path1 [cytosol] R-ACO-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119465 Sucrose biosynthesis none Ananas comosus Aco007319.1.path1 R-ACO-9675790 Aco007319.1.path1 [nucleoplasm] R-ACO-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675824 DNA replication Initiation none Ananas comosus Aco007341.1.path1 R-ACO-8986605 Aco007341.1.path1 [mitochondrial matrix] R-ACO-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119312 Photorespiration none Ananas comosus Aco007341.1.path1 R-ACO-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-ACO-1119351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119351 Mitochondrial pyruvate metabolism none Ananas comosus Aco007341.1.path1 R-ACO-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-ACO-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119533 TCA cycle (plant) none Ananas comosus Aco007439.1.path1 R-ACO-1122605 Aco007439.1.path1 [cytosol] R-ACO-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119341 Galactosylcyclitol biosynthesis none Ananas comosus Aco007465.1.path1 R-ACO-9026148-2 Aco007465.1.path1 [mitochondrion] R-ACO-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119458 Glutamate degradation none Ananas comosus Aco007465.1.path1 R-ACO-1130288-2 Aco007465.1.path1 [cytosol] R-ACO-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119610 Biotin biosynthesis II none Ananas comosus Aco007469.1.path1 R-ACO-1125920 Aco007469.1.path1 [cytosol] R-ACO-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119273 Lysine biosynthesis I none Ananas comosus Aco007469.1.path1 R-ACO-1125920 Aco007469.1.path1 [cytosol] R-ACO-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119283 Lysine biosynthesis II none Ananas comosus Aco007472.1.path1 R-ACO-9826677-2 Aco007472.1.path1 [nucleoplasm] R-ACO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Ananas comosus Aco007526.1.path1 R-ACO-1123465 Aco007526.1.path1 [plastid stroma] R-ACO-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119424 Plastid glycolysis none Ananas comosus Aco007526.1.path1 R-ACO-5633368 Aco007526.1.path1 [cytosol] R-ACO-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119601 Trehalose degradation II none Ananas comosus Aco007552.1.path1 R-ACO-9025699 Aco007552.1.path1 [plasma membrane] R-ACO-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8858053 Polar auxin transport none Ananas comosus Aco007552.1.path1 R-ACO-9025699 Aco007552.1.path1 [plasma membrane] R-ACO-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9025727 Iron uptake and transport in root vascular system none Ananas comosus Aco007570.1.path1 R-ACO-9658643 Aco007570.1.path1 [cytosol] R-ACO-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119567 Beta-alanine biosynthesis I none Ananas comosus Aco007577.1.path1 R-ACO-1128613-2 Aco007577.1.path1 [cytosol] R-ACO-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119316 Phenylpropanoid biosynthesis none Ananas comosus Aco007578.1.path1 R-ACO-1128613 Aco007578.1.path1 [cytosol] R-ACO-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119316 Phenylpropanoid biosynthesis none Ananas comosus Aco007622.1.path1 R-ACO-5146758 Aco007622.1.path1 [mitochondrial matrix] R-ACO-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119533 TCA cycle (plant) none Ananas comosus Aco007635.1.path1 R-ACO-4827046-2 Aco007635.1.path1 [plastid stroma] R-ACO-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-4827054 Tetrapyrrole biosynthesis I none Ananas comosus Aco007644.1.path1 R-ACO-8879004 Aco007644.1.path1 [nucleoplasm] R-ACO-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8879007 Response to cold temperature none Ananas comosus Aco007655.1.path1 R-ACO-1123250 Aco007655.1.path1 [cytosol] R-ACO-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119265 Tetrahydrofolate biosynthesis I none Ananas comosus Aco007655.1.path1 R-ACO-1123250 Aco007655.1.path1 [cytosol] R-ACO-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119523 Tetrahydrofolate biosynthesis II none Ananas comosus Aco007673.1.path1 R-ACO-9675845 Aco007673.1.path1 [nucleoplasm] R-ACO-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675782 Maturation none Ananas comosus Aco007706.1.path1 R-ACO-9828974 CKX3 [endoplasmic reticulum lumen] R-ACO-9828944 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9828944 Regulation of lemma joint development and leaf angle by cytokinin none Ananas comosus Aco007711.1.path1 R-ACO-6787241 Aco007711.1.path1 [nucleoplasm] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco007718.1.path1 R-ACO-9618056 Aco007718.1.path1 [plasma membrane] R-ACO-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9618218 Arsenic uptake and detoxification none Ananas comosus Aco007727.1.path1 R-ACO-1130235-3 Aco007727.1.path1 [cytosol] R-ACO-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119261 Salicylate biosynthesis none Ananas comosus Aco007727.1.path1 R-ACO-1130235-3 Aco007727.1.path1 [cytosol] R-ACO-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119418 Suberin biosynthesis none Ananas comosus Aco007727.1.path1 R-ACO-1130235-3 Aco007727.1.path1 [cytosol] R-ACO-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119582 Phenylpropanoid biosynthesis, initial reactions none Ananas comosus Aco007731.1.path1 R-ACO-8933738-2 Aco007731.1.path1 [nucleoplasm] R-ACO-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8933811 Circadian rhythm none Ananas comosus Aco007749.1.path1 R-ACO-5632268 Aco007749.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco007755.1.path1 R-ACO-1129896 Aco007755.1.path1 [mitochondrial matrix] R-ACO-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119533 TCA cycle (plant) none Ananas comosus Aco007775.1.path1 R-ACO-5149646-3 Aco007775.1.path1 [plastid stroma] R-ACO-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119519 Calvin cycle none Ananas comosus Aco007775.1.path1 R-ACO-1126652-3 Aco007775.1.path1 [cytosol] R-ACO-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119570 Cytosolic glycolysis none Ananas comosus Aco007778.1.path1 R-ACO-1124067 Aco007778.1.path1 [amyloplast] R-ACO-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119477 Starch biosynthesis none Ananas comosus Aco007778.1.path1 R-ACO-9626520 Aco007778.1.path1 [plastid stroma] R-ACO-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9626305 Regulatory network of nutrient accumulation none Ananas comosus Aco007786.1.path1 R-ACO-5655070 Aco007786.1.path1 [Golgi lumen] R-ACO-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5655101 Xyloglucan biosynthesis none Ananas comosus Aco007803.1.path1 R-ACO-1125374 Aco007803.1.path1 [cytosol] R-ACO-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119586 Cyanate degradation none Ananas comosus Aco007831.1.path1 R-ACO-9640739 Aco007831.1.path1 [nucleoplasm] R-ACO-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640887 G1/S transition none Ananas comosus Aco007843.1.path1 R-ACO-8854121 Aco007843.1.path1 [cytosol] R-ACO-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119556 Choline biosynthesis I none Ananas comosus Aco007884.1.path1 R-ACO-1126955 Aco007884.1.path1 [plastid] R-ACO-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119407 Ureide biosynthesis none Ananas comosus Aco007893.1.path1 R-ACO-9675481-2 Aco007893.1.path1 [cytosol] R-ACO-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9030654 Primary root development none Ananas comosus Aco007909.1.path1 R-ACO-9675807 Aco007909.1.path1 [nucleoplasm] R-ACO-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675782 Maturation none Ananas comosus Aco007909.1.path1 R-ACO-9675807 Aco007909.1.path1 [nucleoplasm] R-ACO-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675815 Leading strand synthesis none Ananas comosus Aco007909.1.path1 R-ACO-9675807 Aco007909.1.path1 [nucleoplasm] R-ACO-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675885 Lagging strand synthesis none Ananas comosus Aco007915.1.path1 R-ACO-6788234-2 Aco007915.1.path1 [cytosol] R-ACO-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6788019 Salicylic acid signaling none Ananas comosus Aco007915.1.path1 R-ACO-1124041-2 Aco007915.1.path1 [nucleoplasm] R-ACO-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6788019 Salicylic acid signaling none Ananas comosus Aco007956.1.path1 R-ACO-5084918 Aco007956.1.path1 [cytosol] R-ACO-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119624 Methionine salvage pathway none Ananas comosus Aco007973.1.path1 R-ACO-1125309 Aco007973.1.path1 [nucleoplasm] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco008013.1.path1 R-ACO-1129610 Aco008013.1.path1 [cytosol] R-ACO-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119506 tyrosine degradation I none Ananas comosus Aco008016.1.path1 R-ACO-9675426 Aco008016.1.path1 [nucleoplasm] R-ACO-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9030654 Primary root development none Ananas comosus Aco008021.1.path1 R-ACO-1123563 Aco008021.1.path1 [cytosol] R-ACO-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119379 Flavin biosynthesis none Ananas comosus Aco008022.1.path1 R-ACO-9675272 Aco008022.1.path1 [plasma membrane] R-ACO-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9030654 Primary root development none Ananas comosus Aco008028.1.path1 R-ACO-1124523 Aco008028.1.path1 [cytosol] R-ACO-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119460 Isoleucine biosynthesis from threonine none Ananas comosus Aco008028.1.path1 R-ACO-1124523 Aco008028.1.path1 [cytosol] R-ACO-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119600 Valine biosynthesis none Ananas comosus Aco008076.1.path1 R-ACO-1124939 Aco008076.1.path1 [cytosol] R-ACO-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119540 Leucine biosynthesis none Ananas comosus Aco008077.1.path1 R-ACO-1124939-2 Aco008077.1.path1 [cytosol] R-ACO-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119540 Leucine biosynthesis none Ananas comosus Aco008163.1.path1 R-ACO-1127574 Aco008163.1.path1 [cytosol] R-ACO-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119465 Sucrose biosynthesis none Ananas comosus Aco008200.1.path1 R-ACO-6787130 Aco008200.1.path1 [nucleoplasm] R-ACO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Ananas comosus Aco008205.1.path1 R-ACO-1130344 Aco008205.1.path1 [cytosol] R-ACO-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119389 Phenylalanine biosynthesis I none Ananas comosus Aco008252.1.path1 R-ACO-1122463 Aco008252.1.path1 [cytosol] R-ACO-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119321 Glycerol degradation I none Ananas comosus Aco008330.1.path1 R-ACO-3230566 Aco008330.1.path1 [plastid stroma] R-ACO-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119519 Calvin cycle none Ananas comosus Aco008345.1.path1 R-ACO-9658573 Aco008345.1.path1 [endoplasmic reticulum lumen] R-ACO-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119502 Allantoin degradation none Ananas comosus Aco008361.1.path1 R-ACO-8987505 Aco008361.1.path1 [mitochondrial matrix] R-ACO-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119312 Photorespiration none Ananas comosus Aco008365.1.path1 R-ACO-4827041 Aco008365.1.path1 [plastid stroma] R-ACO-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-4827054 Tetrapyrrole biosynthesis I none Ananas comosus Aco008400.1.path1 R-ACO-1130348 Aco008400.1.path1 [cytosol] R-ACO-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Ananas comosus Aco008406.1.path1 R-ACO-1127743 Aco008406.1.path1 [cytosol] R-ACO-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119428 GDP-D-rhamnose biosynthesis none Ananas comosus Aco008406.1.path1 R-ACO-9681930 Aco008406.1.path1 [Golgi membrane] R-ACO-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119574 UDP-L-arabinose biosynthesis and transport none Ananas comosus Aco008406.1.path1 R-ACO-1127743 Aco008406.1.path1 [cytosol] R-ACO-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Ananas comosus Aco008417.1.path1 R-ACO-1128624 Aco008417.1.path1 [mitochondrial inner membrane] R-ACO-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119479 Valine degradation none Ananas comosus Aco008426.1.path1 R-ACO-5608154-2 Aco008426.1.path1 [nucleoplasm] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco008436.1.path1 R-ACO-1127243 Aco008436.1.path1 [amyloplast] R-ACO-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119477 Starch biosynthesis none Ananas comosus Aco008462.1.path1 R-ACO-1129867 Aco008462.1.path1 [chloroplast] R-ACO-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119494 Tryptophan biosynthesis none Ananas comosus Aco008535.1.path1 R-ACO-1125504 Aco008535.1.path1 [cytosol] R-ACO-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119273 Lysine biosynthesis I none Ananas comosus Aco008535.1.path1 R-ACO-1125504 Aco008535.1.path1 [cytosol] R-ACO-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119283 Lysine biosynthesis II none Ananas comosus Aco008535.1.path1 R-ACO-1125504 Aco008535.1.path1 [cytosol] R-ACO-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119295 Homoserine biosynthesis none Ananas comosus Aco008535.1.path1 R-ACO-5606489 Aco008535.1.path1 [plastid stroma] R-ACO-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119419 Lysine biosynthesis VI none Ananas comosus Aco008550.1.path1 R-ACO-8933816 Aco008550.1.path1 [nucleoplasm] R-ACO-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8933811 Circadian rhythm none Ananas comosus Aco008642.1.path1 R-ACO-1129247-2 Aco008642.1.path1 [mitochondrial inner membrane] R-ACO-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119533 TCA cycle (plant) none Ananas comosus Aco008649.1.path1 R-ACO-9025728 Aco008649.1.path1 [plasma membrane] R-ACO-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9025727 Iron uptake and transport in root vascular system none Ananas comosus Aco008662.1.path1 R-ACO-1123404 Aco008662.1.path1 [peroxisomal matrix] R-ACO-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119407 Ureide biosynthesis none Ananas comosus Aco008665.1.path1 R-ACO-9025508 Aco008665.1.path1 [endoplasmic reticulum membrane] R-ACO-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119325 Sphingolipid metabolism none Ananas comosus Aco008679.1.path1 R-ACO-1125489 Aco008679.1.path1 [Golgi membrane] R-ACO-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119428 GDP-D-rhamnose biosynthesis none Ananas comosus Aco008679.1.path1 R-ACO-1125489 Aco008679.1.path1 [Golgi membrane] R-ACO-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119574 UDP-L-arabinose biosynthesis and transport none Ananas comosus Aco008679.1.path1 R-ACO-1125489 Aco008679.1.path1 [Golgi membrane] R-ACO-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Ananas comosus Aco008680.1.path1 R-ACO-1124484 Aco008680.1.path1 [plastid stroma] R-ACO-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119519 Calvin cycle none Ananas comosus Aco008695.1.path1 R-ACO-1128989 Aco008695.1.path1 [plastid stroma] R-ACO-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119509 Histidine biosynthesis I none Ananas comosus Aco008712.1.path1 R-ACO-1128973 Aco008712.1.path1 [cytosol] R-ACO-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Ananas comosus Aco008712.1.path1 R-ACO-1128973 Aco008712.1.path1 [cytosol] R-ACO-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119438 Secologanin and strictosidine biosynthesis none Ananas comosus Aco008712.1.path1 R-ACO-1128973 Aco008712.1.path1 [cytosol] R-ACO-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119486 IAA biosynthesis I none Ananas comosus Aco008734.1.path1 R-ACO-5221144 Aco008734.1.path1 [plastid] R-ACO-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119374 Abscisic acid biosynthesis none Ananas comosus Aco008743.1.path1 R-ACO-5632111 Aco008743.1.path1 [cytosol] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco008743.1.path1 R-ACO-5632216 phospho-Aco008743.1.path1 [cytosol] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco008743.1.path1 R-ACO-5632145 phospho-Aco008743.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco008771.1.path1 R-ACO-1125151-2 Aco008771.1.path1 [cytosol] R-ACO-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119400 Methionine biosynthesis II none Ananas comosus Aco008771.1.path1 R-ACO-1125151-2 Aco008771.1.path1 [cytosol] R-ACO-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119501 S-adenosyl-L-methionine cycle none Ananas comosus Aco008779.1.path1 R-ACO-9675838 Aco008779.1.path1 [nucleoplasm] R-ACO-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675815 Leading strand synthesis none Ananas comosus Aco008784.1.path1 R-ACO-9611864 Aco008784.1.path1 [mitochondrial matrix] R-ACO-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119479 Valine degradation none Ananas comosus Aco008788.1.path1 R-ACO-9927822-2 Aco008788.1.path1 [nucleoplasm] R-ACO-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8934036 Long day regulated expression of florigens none Ananas comosus Aco008824.1.path1 R-ACO-3321270 Aco008824.1.path1 [chloroplast inner membrane] R-ACO-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119287 Vitamin E biosynthesis none Ananas comosus Aco008862.1.path1 R-ACO-5679324 Aco008862.1.path1 [cytosol] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco008912.1.path1 R-ACO-1122881 Aco008912.1.path1 [cytosol] R-ACO-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Ananas comosus Aco008912.1.path1 R-ACO-1122881 Aco008912.1.path1 [cytosol] R-ACO-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119438 Secologanin and strictosidine biosynthesis none Ananas comosus Aco008912.1.path1 R-ACO-1122881 Aco008912.1.path1 [cytosol] R-ACO-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119486 IAA biosynthesis I none Ananas comosus Aco008925.1.path1 R-ACO-9618171 Aco008925.1.path1 [plasma membrane] R-ACO-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9618218 Arsenic uptake and detoxification none Ananas comosus Aco008949.1.path1 R-ACO-2685732 Aco008949.1.path1 [cytosol] R-ACO-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119580 IAA biosynthesis II none Ananas comosus Aco008954.1.path1 R-ACO-9918201 Aco008954.1.path1 [amyloplast] R-ACO-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119477 Starch biosynthesis none Ananas comosus Aco008958.1.path1 R-ACO-8933738 Aco008958.1.path1 [nucleoplasm] R-ACO-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8933811 Circadian rhythm none Ananas comosus Aco008968.1.path1 R-ACO-8879029 DREB1G [nucleoplasm] R-ACO-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8879007 Response to cold temperature none Ananas comosus Aco008968.1.path1 R-ACO-8879071 CBF1 homolog [nucleoplasm] R-ACO-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8879007 Response to cold temperature none Ananas comosus Aco008982.1.path1 R-ACO-9675357 Aco008982.1.path1 [nucleoplasm] R-ACO-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9030680 Crown root development none Ananas comosus Aco009063.1.path1 R-ACO-9918206 Aco009063.1.path1 [amyloplast] R-ACO-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119477 Starch biosynthesis none Ananas comosus Aco009080.1.path1 R-ACO-1125494 Aco009080.1.path1 [endoplasmic reticulum membrane] R-ACO-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119402 Phospholipid biosynthesis I none Ananas comosus Aco009136.1.path1 R-ACO-9025487 Aco009136.1.path1 [cytosol] R-ACO-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119325 Sphingolipid metabolism none Ananas comosus Aco009158.1.path1 R-ACO-1126828-2 Aco009158.1.path1 [plastid] R-ACO-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119403 Removal of superoxide radicals none Ananas comosus Aco009167.1.path1 R-ACO-8854445-2 Aco009167.1.path1 [cytosol] R-ACO-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119276 Choline biosynthesis III none Ananas comosus Aco009213.1.path1 R-ACO-8868994 Aco009213.1.path1 [endoplasmic reticulum membrane] R-ACO-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8868949 Intracellular auxin transport none Ananas comosus Aco009214.1.path1 R-ACO-1125974 Aco009214.1.path1 [cytosol] R-ACO-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119262 Threonine biosynthesis from homoserine none Ananas comosus Aco009214.1.path1 R-ACO-1125974 Aco009214.1.path1 [cytosol] R-ACO-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119400 Methionine biosynthesis II none Ananas comosus Aco009249.1.path1 R-ACO-9645872 Aco009249.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco009252.1.path1 R-ACO-1125612 Aco009252.1.path1 [cytosol] R-ACO-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119353 Linear furanocoumarin biosynthesis none Ananas comosus Aco009254.1.path1 R-ACO-1125564-2 Aco009254.1.path1 [cytosol] R-ACO-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119291 Nitrate assimilation none Ananas comosus Aco009254.1.path1 R-ACO-1125564-2 Aco009254.1.path1 [cytosol] R-ACO-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119293 Glutamine biosynthesis I none Ananas comosus Aco009254.1.path1 R-ACO-1125564-2 Aco009254.1.path1 [cytosol] R-ACO-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119443 Ammonia assimilation cycle none Ananas comosus Aco009296.1.path1 R-ACO-1125670 Aco009296.1.path1 [cytosol] R-ACO-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119393 Asparagine degradation I none Ananas comosus Aco009322.1.path1 R-ACO-1126131 Aco009322.1.path1 [cytosol] R-ACO-1119528 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119528 Beta-alanine betaine biosynthesis none Ananas comosus Aco009360.1.path1 R-ACO-1123786 Aco009360.1.path1 R-ACO-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119403 Removal of superoxide radicals none Ananas comosus Aco009452.1.path1 R-ACO-5083827-3 Aco009452.1.path1 [mitochondrial matrix] R-ACO-1119319 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119319 Alanine biosynthesis III none Ananas comosus Aco009452.1.path1 R-ACO-5083827-3 Aco009452.1.path1 [mitochondrial matrix] R-ACO-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119612 Cysteine degradation none Ananas comosus Aco009464.1.path1 R-ACO-5083827 Aco009464.1.path1 [mitochondrial matrix] R-ACO-1119319 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119319 Alanine biosynthesis III none Ananas comosus Aco009464.1.path1 R-ACO-5083827 Aco009464.1.path1 [mitochondrial matrix] R-ACO-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119612 Cysteine degradation none Ananas comosus Aco009506.1.path1 R-ACO-8987499 Aco009506.1.path1 [peroxisomal matrix] R-ACO-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119312 Photorespiration none Ananas comosus Aco009506.1.path1 R-ACO-1130222 Aco009506.1.path1 [cytosol] R-ACO-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119596 Glutamate biosynthesis I none Ananas comosus Aco009508.1.path1 R-ACO-1129561 Aco009508.1.path1 [cytosol] R-ACO-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119452 Galactose degradation II none Ananas comosus Aco009508.1.path1 R-ACO-1129561 Aco009508.1.path1 [cytosol] R-ACO-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119465 Sucrose biosynthesis none Ananas comosus Aco009529.1.path1 R-ACO-1124249 Aco009529.1.path1 [cytosol] R-ACO-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119428 GDP-D-rhamnose biosynthesis none Ananas comosus Aco009529.1.path1 R-ACO-1124249 Aco009529.1.path1 [cytosol] R-ACO-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Ananas comosus Aco009547.1.path1 R-ACO-9640777 Aco009547.1.path1 [nucleoplasm] R-ACO-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640760 G1 phase none Ananas comosus Aco009547.1.path1 R-ACO-9640777 Aco009547.1.path1 [nucleoplasm] R-ACO-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640887 G1/S transition none Ananas comosus Aco009558.1.path1 R-ACO-1129934-3 Aco009558.1.path1 [plastid stroma] R-ACO-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119430 Chorismate biosynthesis none Ananas comosus Aco009577.1.path1 R-ACO-1129082 Aco009577.1.path1 [mitochondrial matrix] R-ACO-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119445 Beta-alanine biosynthesis II none Ananas comosus Aco009592.1.path1 R-ACO-9025443 Aco009592.1.path1 [endoplasmic reticulum membrane] R-ACO-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119325 Sphingolipid metabolism none Ananas comosus Aco009644.1.path1 R-ACO-1122398 Aco009644.1.path1 [amyloplast] R-ACO-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119477 Starch biosynthesis none Ananas comosus Aco009670.1.path1 R-ACO-1127299 Aco009670.1.path1 [cytosol] R-ACO-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119298 Glutathione redox reactions II none Ananas comosus Aco009670.1.path1 R-ACO-1127299 Aco009670.1.path1 [cytosol] R-ACO-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119437 Glutathione redox reactions I none Ananas comosus Aco009671.1.path1 R-ACO-1122892 Aco009671.1.path1 [nucleoplasm] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco009671.1.path1 R-ACO-1122892 Aco009671.1.path1 [nucleoplasm] R-ACO-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9030557 Lateral root initiation none Ananas comosus Aco009671.1.path1 R-ACO-1122892 Aco009671.1.path1 [nucleoplasm] R-ACO-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9030654 Primary root development none Ananas comosus Aco009685.1.path1 R-ACO-9924379 HSFA2D [nucleoplasm] R-ACO-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9924451 Shoot (tiller) formation and regulation of tiller angle none Ananas comosus Aco009734.1.path1 R-ACO-1126604-2 Aco009734.1.path1 [cytosol] R-ACO-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119438 Secologanin and strictosidine biosynthesis none Ananas comosus Aco009741.1.path1 R-ACO-1122471-2 Aco009741.1.path1 [cytosol] R-ACO-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119276 Choline biosynthesis III none Ananas comosus Aco009751.1.path1 R-ACO-8933766 Aco009751.1.path1 [nucleoplasm] R-ACO-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8933811 Circadian rhythm none Ananas comosus Aco009768.1.path1 R-ACO-4723660 Aco009768.1.path1 [plastid stroma] R-ACO-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119464 Methylerythritol phosphate pathway none Ananas comosus Aco009768.1.path1 R-ACO-1125869 Aco009768.1.path1 [cytosol] R-ACO-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119594 Pyridoxal 5'-phosphate biosynthesis none Ananas comosus Aco009768.1.path1 R-ACO-1125869 Aco009768.1.path1 [cytosol] R-ACO-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119629 Thiamine biosynthesis none Ananas comosus Aco009793.1.path1 R-ACO-1129355 Aco009793.1.path1 [plastid] R-ACO-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119403 Removal of superoxide radicals none Ananas comosus Aco009924.1.path1 R-ACO-6788127 Aco009924.1.path1 [nucleoplasm] R-ACO-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6788019 Salicylic acid signaling none Ananas comosus Aco009924.1.path1 R-ACO-6788179 Aco009924.1.path1 [cytosol] R-ACO-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6788019 Salicylic acid signaling none Ananas comosus Aco009977.1.path1 R-ACO-1125698 Aco009977.1.path1 [cytosol] R-ACO-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119436 Peptidoglycan biosynthesis I none Ananas comosus Aco009998.1.path1 R-ACO-5632312 Aco009998.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco009998.1.path1 R-ACO-5632125 phospho-Aco009998.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco009998.1.path1 R-ACO-5632342 phospho-Aco009998.1.path1 [cytosol] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco009998.1.path1 R-ACO-5632312 Aco009998.1.path1 [nucleoplasm] R-ACO-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5679411 Gibberellin signaling none Ananas comosus Aco010022.1.path1 R-ACO-5654840 Aco010022.1.path1 [nucleoplasm] R-ACO-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5654828 Strigolactone signaling none Ananas comosus Aco010022.1.path1 R-ACO-5654840 Aco010022.1.path1 [nucleoplasm] R-ACO-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Ananas comosus Aco010091.1.path1 R-ACO-1130235-2 Aco010091.1.path1 [cytosol] R-ACO-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119261 Salicylate biosynthesis none Ananas comosus Aco010091.1.path1 R-ACO-1130235-2 Aco010091.1.path1 [cytosol] R-ACO-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119418 Suberin biosynthesis none Ananas comosus Aco010091.1.path1 R-ACO-1130235-2 Aco010091.1.path1 [cytosol] R-ACO-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119582 Phenylpropanoid biosynthesis, initial reactions none Ananas comosus Aco010097.1.path1 R-ACO-1126373-2 Aco010097.1.path1 [cytosol] R-ACO-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Ananas comosus Aco010154.1.path1 R-ACO-1128327 Aco010154.1.path1 [cytosol] R-ACO-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119267 Phenylalanine degradation III none Ananas comosus Aco010161.1.path1 R-ACO-9675439 Aco010161.1.path1 [mitochondrial matrix] R-ACO-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9030654 Primary root development none Ananas comosus Aco010178.1.path1 R-ACO-5633270 Aco010178.1.path1 [cytosol] R-ACO-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119495 Citrulline biosynthesis none Ananas comosus Aco010184.1.path1 R-ACO-1128385 Aco010184.1.path1 [nucleoplasm] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco010239.1.path1 R-ACO-1126828 Aco010239.1.path1 [plastid] R-ACO-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119403 Removal of superoxide radicals none Ananas comosus Aco010241.1.path1 R-ACO-8868961 Aco010241.1.path1 [plant-type vacuole membrane] R-ACO-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8868949 Intracellular auxin transport none Ananas comosus Aco010281.1.path1 R-ACO-1125556 Aco010281.1.path1 [cytosol] R-ACO-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119410 Ascorbate biosynthesis none Ananas comosus Aco010281.1.path1 R-ACO-1125556 Aco010281.1.path1 [cytosol] R-ACO-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119628 GDP-mannose metabolism none Ananas comosus Aco010326.1.path1 R-ACO-8933787 Aco010326.1.path1 [nucleoplasm] R-ACO-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8933811 Circadian rhythm none Ananas comosus Aco010363.1.path1 R-ACO-5654827 Aco010363.1.path1 [nucleoplasm] R-ACO-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5654828 Strigolactone signaling none Ananas comosus Aco010374.1.path1 R-ACO-9640789 Aco010374.1.path1 [nucleoplasm] R-ACO-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640760 G1 phase none Ananas comosus Aco010381.1.path1 R-ACO-8987448 Aco010381.1.path1 [peroxisomal matrix] R-ACO-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119312 Photorespiration none Ananas comosus Aco010390.1.path1 R-ACO-9618112 Aco010390.1.path1 [plasma membrane] R-ACO-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9618218 Arsenic uptake and detoxification none Ananas comosus Aco010396.1.path1 R-ACO-1125631 Aco010396.1.path1 [cytosol] R-ACO-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119321 Glycerol degradation I none Ananas comosus Aco010397.1.path1 R-ACO-9640698 Aco010397.1.path1 [nucleoplasm] R-ACO-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640887 G1/S transition none Ananas comosus Aco010422.1.path1 R-ACO-9031169-2 Aco010422.1.path1 [endoplasmic reticulum lumen] R-ACO-9031225 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9031225 Response to phosphate deficiency none Ananas comosus Aco010422.1.path1 R-ACO-9031255-2 Aco010422.1.path1 [plasma membrane] R-ACO-9031225 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9031225 Response to phosphate deficiency none Ananas comosus Aco010422.1.path1 R-ACO-9031255-2 Aco010422.1.path1 [plasma membrane] R-ACO-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9618218 Arsenic uptake and detoxification none Ananas comosus Aco010430.1.path1 R-ACO-6787093 Aco010430.1.path1 [nucleoplasm] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco010432.1.path1 R-ACO-9640782 Aco010432.1.path1 [nucleoplasm] R-ACO-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640882 Assembly of pre-replication complex none Ananas comosus Aco010452.1.path1 R-ACO-5225766 Aco010452.1.path1 [nucleoplasm] R-ACO-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5225756 Ethylene mediated signaling none Ananas comosus Aco010546.1.path1 R-ACO-8987548 Aco010546.1.path1 [peroxisomal matrix] R-ACO-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119312 Photorespiration none Ananas comosus Aco010558.1.path1 R-ACO-6788261 Aco010558.1.path1 [nucleoplasm] R-ACO-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6788019 Salicylic acid signaling none Ananas comosus Aco010617.1.path1 R-ACO-1127733 Aco010617.1.path1 [cytosol] R-ACO-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119460 Isoleucine biosynthesis from threonine none Ananas comosus Aco010617.1.path1 R-ACO-1127733 Aco010617.1.path1 [cytosol] R-ACO-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119600 Valine biosynthesis none Ananas comosus Aco010657.1.path1 R-ACO-4415060 Aco010657.1.path1 [plasma membrane] R-ACO-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-3899351 Abscisic acid (ABA) mediated signaling none Ananas comosus Aco010657.1.path1 R-ACO-4415065 phospho-Aco010657.1.path1 [plasma membrane] R-ACO-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-3899351 Abscisic acid (ABA) mediated signaling none Ananas comosus Aco010683.1.path1 R-ACO-8934025 Aco010683.1.path1 [nucleoplasm] R-ACO-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8934036 Long day regulated expression of florigens none Ananas comosus Aco010683.1.path1 R-ACO-8934025 Aco010683.1.path1 [nucleoplasm] R-ACO-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8934108 Short day regulated expression of florigens none Ananas comosus Aco010683.1.path1 R-ACO-8934025 Aco010683.1.path1 [nucleoplasm] R-ACO-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8934257 Transition from vegetative to reproductive shoot apical meristem none Ananas comosus Aco010683.1.path1 R-ACO-9684733 Aco010683.1.path1 [cytosol] R-ACO-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8934257 Transition from vegetative to reproductive shoot apical meristem none Ananas comosus Aco010683.1.path1 R-ACO-9684733 Aco010683.1.path1 [cytosol] R-ACO-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9609102 Flower development none Ananas comosus Aco010683.1.path1 R-ACO-8934025 Aco010683.1.path1 [nucleoplasm] R-ACO-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9928946 Drought escape (DE) via ABA-independent pathway none Ananas comosus Aco010683.1.path1 R-ACO-8934025 Aco010683.1.path1 [nucleoplasm] R-ACO-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9928995 Drought escape (DE) via ABA-dependent pathway none Ananas comosus Aco010717.1.path1 R-ACO-6787202 Aco010717.1.path1 [cytosol] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco010748.1.path1 R-ACO-1125369 Aco010748.1.path1 [cytosol] R-ACO-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119496 Pantothenate biosynthesis I none Ananas comosus Aco010748.1.path1 R-ACO-1125369 Aco010748.1.path1 [cytosol] R-ACO-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119544 Pantothenate biosynthesis II none Ananas comosus Aco010785.1.path1 R-ACO-5633387 Aco010785.1.path1 [mitochondrial matrix] R-ACO-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119445 Beta-alanine biosynthesis II none Ananas comosus Aco010797.1.path1 R-ACO-5608120 Aco010797.1.path1 [nucleoplasm] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco010845.1.path1 R-ACO-6787066 Aco010845.1.path1 [nucleoplasm] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco010848.1.path1 R-ACO-1128586 Aco010848.1.path1 [amyloplast] R-ACO-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119477 Starch biosynthesis none Ananas comosus Aco010855.1.path1 R-ACO-9639957 Aco010855.1.path1 [plasma membrane] R-ACO-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9639861 Development of root hair none Ananas comosus Aco011011.1.path1 R-ACO-1130032 Aco011011.1.path1 [mitochondrial inner membrane] R-ACO-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119260 Cardiolipin biosynthesis none Ananas comosus Aco011020.1.path1 R-ACO-1127140-2 Aco011020.1.path1 [cytosol] R-ACO-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119403 Removal of superoxide radicals none Ananas comosus Aco011027.1.path1 R-ACO-5654933 Aco011027.1.path1 [Golgi lumen] R-ACO-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5654909 Xylan biosynthesis none Ananas comosus Aco011033.1.path1 R-ACO-9611863 Aco011033.1.path1 [mitochondrial matrix] R-ACO-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119479 Valine degradation none Ananas comosus Aco011109.1.path1 R-ACO-6786908 Aco011109.1.path1 [nucleoplasm] R-ACO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Ananas comosus Aco011109.1.path1 R-ACO-9826697 Aco011109.1.path1 [nucleoplasm] R-ACO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Ananas comosus Aco011139.1.path1 R-ACO-1129811 Aco011139.1.path1 [mitochondrion] R-ACO-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119403 Removal of superoxide radicals none Ananas comosus Aco011149.1.path1 R-ACO-1127076 Aco011149.1.path1 [cytosol] R-ACO-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119418 Suberin biosynthesis none Ananas comosus Aco011149.1.path1 R-ACO-1127076 Aco011149.1.path1 [cytosol] R-ACO-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119582 Phenylpropanoid biosynthesis, initial reactions none Ananas comosus Aco011150.1.path1 R-ACO-1127076-2 Aco011150.1.path1 [cytosol] R-ACO-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119418 Suberin biosynthesis none Ananas comosus Aco011150.1.path1 R-ACO-1127076-2 Aco011150.1.path1 [cytosol] R-ACO-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119582 Phenylpropanoid biosynthesis, initial reactions none Ananas comosus Aco011195.1.path1 R-ACO-9639111 Aco011195.1.path1 [plasma membrane] R-ACO-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9639136 Response to Aluminum stress none Ananas comosus Aco011216.1.path1 R-ACO-5654756 Aco011216.1.path1 [cytosol] R-ACO-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119281 Aspartate biosynthesis I none Ananas comosus Aco011216.1.path1 R-ACO-1123648 Aco011216.1.path1 [plastid] R-ACO-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119506 tyrosine degradation I none Ananas comosus Aco011216.1.path1 R-ACO-5631992 Aco011216.1.path1 [plastid stroma] R-ACO-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119553 Asparagine biosynthesis none Ananas comosus Aco011251.1.path1 R-ACO-8987574 Aco011251.1.path1 [mitochondrial matrix] R-ACO-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119311 Glycine biosynthesis I none Ananas comosus Aco011346.1.path1 R-ACO-1124242 Aco011346.1.path1 [plastid stroma] R-ACO-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119464 Methylerythritol phosphate pathway none Ananas comosus Aco011386.1.path1 R-ACO-9675280 Aco011386.1.path1 [nucleoplasm] R-ACO-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9030680 Crown root development none Ananas comosus Aco011403.1.path1 R-ACO-9675297 Aco011403.1.path1 [mitochondrion] R-ACO-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9030654 Primary root development none Ananas comosus Aco011469.1.path1 R-ACO-2685721 Aco011469.1.path1 [cytosol] R-ACO-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119580 IAA biosynthesis II none Ananas comosus Aco011472.1.path1 R-ACO-1124083 Aco011472.1.path1 [cytosol] R-ACO-1119323 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119323 Lipid-A-precursor biosynthesis none Ananas comosus Aco011505.1.path1 R-ACO-1125910 Aco011505.1.path1 [plastid stroma] R-ACO-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119367 Polyisoprenoid biosynthesis none Ananas comosus Aco011529.1.path1 R-ACO-1129485 Aco011529.1.path1 [cytosol] R-ACO-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119341 Galactosylcyclitol biosynthesis none Ananas comosus Aco011530.1.path1 R-ACO-1126860 Aco011530.1.path1 [cytosol] R-ACO-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119321 Glycerol degradation I none Ananas comosus Aco011534.1.path1 R-ACO-5632157-2 Aco011534.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco011534.1.path1 R-ACO-5632157-2 Aco011534.1.path1 [nucleoplasm] R-ACO-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5654828 Strigolactone signaling none Ananas comosus Aco011551.1.path1 R-ACO-1123797 Aco011551.1.path1 [cytosol] R-ACO-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119281 Aspartate biosynthesis I none Ananas comosus Aco011551.1.path1 R-ACO-5632003 Aco011551.1.path1 [plastid stroma] R-ACO-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119553 Asparagine biosynthesis none Ananas comosus Aco011552.1.path1 R-ACO-9640704 Aco011552.1.path1 [nucleoplasm] R-ACO-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640882 Assembly of pre-replication complex none Ananas comosus Aco011552.1.path1 R-ACO-9640704 Aco011552.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco011552.1.path1 R-ACO-9640704 Aco011552.1.path1 [nucleoplasm] R-ACO-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675824 DNA replication Initiation none Ananas comosus Aco011579.1.path1 R-ACO-1128173 Aco011579.1.path1 [cytosol] R-ACO-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119437 Glutathione redox reactions I none Ananas comosus Aco011644.1.path1 R-ACO-8933730-3 Aco011644.1.path1 [nucleoplasm] R-ACO-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8933811 Circadian rhythm none Ananas comosus Aco011666.1.path1 R-ACO-1126053 Aco011666.1.path1 [mitochondrial matrix] R-ACO-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119479 Valine degradation none Ananas comosus Aco011698.1.path1 R-ACO-8934002 Aco011698.1.path1 [nucleoplasm] R-ACO-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8934036 Long day regulated expression of florigens none Ananas comosus Aco011698.1.path1 R-ACO-9927770 phospho-Aco011698.1.path1 [nucleoplasm] R-ACO-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8934036 Long day regulated expression of florigens none Ananas comosus Aco011698.1.path1 R-ACO-8934002 Aco011698.1.path1 [nucleoplasm] R-ACO-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9928946 Drought escape (DE) via ABA-independent pathway none Ananas comosus Aco011698.1.path1 R-ACO-8934002 Aco011698.1.path1 [nucleoplasm] R-ACO-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9928995 Drought escape (DE) via ABA-dependent pathway none Ananas comosus Aco011726.1.path1 R-ACO-1123575 Aco011726.1.path1 [cytosol] R-ACO-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119297 Beta-alanine biosynthesis III none Ananas comosus Aco011727.1.path1 R-ACO-1125569 Aco011727.1.path1 [cytosol] R-ACO-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119516 Trehalose biosynthesis I none Ananas comosus Aco011747.1.path1 R-ACO-1126615 Aco011747.1.path1 [cytosol] R-ACO-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119437 Glutathione redox reactions I none Ananas comosus Aco011759.1.path1 R-ACO-1129277 Aco011759.1.path1 [cytosol] R-ACO-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119460 Isoleucine biosynthesis from threonine none Ananas comosus Aco011759.1.path1 R-ACO-1129277 Aco011759.1.path1 [cytosol] R-ACO-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119496 Pantothenate biosynthesis I none Ananas comosus Aco011759.1.path1 R-ACO-1129277 Aco011759.1.path1 [cytosol] R-ACO-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119540 Leucine biosynthesis none Ananas comosus Aco011759.1.path1 R-ACO-1129277 Aco011759.1.path1 [cytosol] R-ACO-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119544 Pantothenate biosynthesis II none Ananas comosus Aco011760.1.path1 R-ACO-1122593 Aco011760.1.path1 [cytosol] R-ACO-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119436 Peptidoglycan biosynthesis I none Ananas comosus Aco011760.1.path1 R-ACO-1122593 Aco011760.1.path1 [cytosol] R-ACO-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119523 Tetrahydrofolate biosynthesis II none Ananas comosus Aco011760.1.path1 R-ACO-1122593 Aco011760.1.path1 [cytosol] R-ACO-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119617 Folate polyglutamylation I none Ananas comosus Aco011766.1.path1 R-ACO-4754220 Aco011766.1.path1 [plastid stroma] R-ACO-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119449 Carotenoid biosynthesis none Ananas comosus Aco011766.1.path1 R-ACO-1126847 Aco011766.1.path1 [cytosol] R-ACO-1119492 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119492 Lactucaxanthin biosynthesis none Ananas comosus Aco011788.1.path1 R-ACO-1130136 Aco011788.1.path1 [mitochondrial matrix] R-ACO-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119533 TCA cycle (plant) none Ananas comosus Aco011788.1.path1 R-ACO-1130136 Aco011788.1.path1 [mitochondrial matrix] R-ACO-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119540 Leucine biosynthesis none Ananas comosus Aco011823.1.path1 R-ACO-5632232 phospho-Aco011823.1.path1 [plasma membrane] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco011831.1.path1 R-ACO-1127087 Aco011831.1.path1 [cytosol] R-ACO-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119438 Secologanin and strictosidine biosynthesis none Ananas comosus Aco011834.1.path1 R-ACO-1128263 Aco011834.1.path1 [plastid stroma] R-ACO-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119509 Histidine biosynthesis I none Ananas comosus Aco011910.1.path1 R-ACO-9675876 Aco011910.1.path1 [nucleoplasm] R-ACO-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675782 Maturation none Ananas comosus Aco011910.1.path1 R-ACO-9675876 Aco011910.1.path1 [nucleoplasm] R-ACO-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675815 Leading strand synthesis none Ananas comosus Aco011910.1.path1 R-ACO-9675876 Aco011910.1.path1 [nucleoplasm] R-ACO-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675885 Lagging strand synthesis none Ananas comosus Aco011924.1.path1 R-ACO-1126728 Aco011924.1.path1 [plastid stroma] R-ACO-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119424 Plastid glycolysis none Ananas comosus Aco011931.1.path1 R-ACO-5679402 Aco011931.1.path1 [nucleoplasm] R-ACO-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5679411 Gibberellin signaling none Ananas comosus Aco011938.1.path1 R-ACO-6787009 Aco011938.1.path1 [nucleoplasm] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco011990.1.path1 R-ACO-1127899 Aco011990.1.path1 [cytosol] R-ACO-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119370 Sterol biosynthesis none Ananas comosus Aco012003.1.path1 R-ACO-9826681 EREBP129 [nucleoplasm] R-ACO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Ananas comosus Aco012010.1.path1 R-ACO-9618139 Aco012010.1.path1 [plasma membrane] R-ACO-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9618218 Arsenic uptake and detoxification none Ananas comosus Aco012018.1.path1 R-ACO-1123757 Aco012018.1.path1 [cytosol] R-ACO-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119460 Isoleucine biosynthesis from threonine none Ananas comosus Aco012018.1.path1 R-ACO-1123757 Aco012018.1.path1 [cytosol] R-ACO-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119473 Cytokinins-O-glucoside biosynthesis none Ananas comosus Aco012018.1.path1 R-ACO-1123757 Aco012018.1.path1 [cytosol] R-ACO-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119496 Pantothenate biosynthesis I none Ananas comosus Aco012018.1.path1 R-ACO-1123757 Aco012018.1.path1 [cytosol] R-ACO-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119540 Leucine biosynthesis none Ananas comosus Aco012018.1.path1 R-ACO-1123757 Aco012018.1.path1 [cytosol] R-ACO-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119544 Pantothenate biosynthesis II none Ananas comosus Aco012041.1.path1 R-ACO-1130416 Aco012041.1.path1 [mitochondrial matrix] R-ACO-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119337 Proline degradation none Ananas comosus Aco012041.1.path1 R-ACO-1130416 Aco012041.1.path1 [mitochondrial matrix] R-ACO-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119495 Citrulline biosynthesis none Ananas comosus Aco012065.1.path1 R-ACO-1128054 Aco012065.1.path1 [mitochondrial matrix] R-ACO-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119479 Valine degradation none Ananas comosus Aco012076.1.path1 R-ACO-1124334 Aco012076.1.path1 [plasma membrane] R-ACO-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119314 Cellulose biosynthesis none Ananas comosus Aco012095.1.path1 R-ACO-1129203 Aco012095.1.path1 [cytosol] R-ACO-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119428 GDP-D-rhamnose biosynthesis none Ananas comosus Aco012095.1.path1 R-ACO-1129203 Aco012095.1.path1 [cytosol] R-ACO-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Ananas comosus Aco012107.1.path1 R-ACO-1123210 Aco012107.1.path1 [cytosol] R-ACO-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119516 Trehalose biosynthesis I none Ananas comosus Aco012122.1.path1 R-ACO-9675354 Aco012122.1.path1 [nucleoplasm] R-ACO-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675508 Root elongation none Ananas comosus Aco012122.1.path1 R-ACO-9675335 Aco012122.1.path1 [mitochondrial matrix] R-ACO-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675508 Root elongation none Ananas comosus Aco012194.1.path1 R-ACO-1126034 Aco012194.1.path1 [cytosol] R-ACO-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119534 Pyridoxal 5'-phosphate salvage pathway none Ananas comosus Aco012194.1.path1 R-ACO-1126034 Aco012194.1.path1 [cytosol] R-ACO-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119594 Pyridoxal 5'-phosphate biosynthesis none Ananas comosus Aco012201.1.path1 R-ACO-1123867 Aco012201.1.path1 [cytosol] R-ACO-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119370 Sterol biosynthesis none Ananas comosus Aco012215.1.path1 R-ACO-3240749 Aco012215.1.path1 [cytosol] R-ACO-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Ananas comosus Aco012215.1.path1 R-ACO-9681918 Aco012215.1.path1 [cytosol] R-ACO-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119574 UDP-L-arabinose biosynthesis and transport none Ananas comosus Aco012233.1.path1 R-ACO-9681920 Aco012233.1.path1 [cytosol] R-ACO-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119574 UDP-L-arabinose biosynthesis and transport none Ananas comosus Aco012237.1.path1 R-ACO-1129879-2 Aco012237.1.path1 [cytosol] R-ACO-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119436 Peptidoglycan biosynthesis I none Ananas comosus Aco012267.1.path1 R-ACO-1129600 Aco012267.1.path1 [cytosol] R-ACO-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119407 Ureide biosynthesis none Ananas comosus Aco012270.1.path1 R-ACO-1129600-2 Aco012270.1.path1 [cytosol] R-ACO-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119407 Ureide biosynthesis none Ananas comosus Aco012320.1.path1 R-ACO-5655075 Aco012320.1.path1 [Golgi lumen] R-ACO-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5655101 Xyloglucan biosynthesis none Ananas comosus Aco012327.1.path1 R-ACO-9658611 Aco012327.1.path1 [plastid stroma] R-ACO-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119263 Arginine biosynthesis none Ananas comosus Aco012327.1.path1 R-ACO-9658611 Aco012327.1.path1 [plastid stroma] R-ACO-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119539 Ornithine biosynthesis none Ananas comosus Aco012327.1.path1 R-ACO-9658611 Aco012327.1.path1 [plastid stroma] R-ACO-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119622 Arginine biosynthesis II (acetyl cycle) none Ananas comosus Aco012371.1.path1 R-ACO-1123819 Aco012371.1.path1 [plastid stroma] R-ACO-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119464 Methylerythritol phosphate pathway none Ananas comosus Aco012375.1.path1 R-ACO-6788084 Aco012375.1.path1 [nucleoplasm] R-ACO-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6788019 Salicylic acid signaling none Ananas comosus Aco012399.1.path1 R-ACO-9681886 Aco012399.1.path1 [cytosol] R-ACO-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119574 UDP-L-arabinose biosynthesis and transport none Ananas comosus Aco012425.1.path1 R-ACO-9681895 Aco012425.1.path1 [Golgi membrane] R-ACO-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119574 UDP-L-arabinose biosynthesis and transport none Ananas comosus Aco012448.1.path1 R-ACO-9608682 Aco012448.1.path1 [nucleoplasm] R-ACO-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8934036 Long day regulated expression of florigens none Ananas comosus Aco012448.1.path1 R-ACO-9608682 Aco012448.1.path1 [nucleoplasm] R-ACO-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9608575 Reproductive meristem phase change none Ananas comosus Aco012448.1.path1 R-ACO-9608606 Aco012448.1.path1 [cytosol] R-ACO-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9608575 Reproductive meristem phase change none Ananas comosus Aco012472.1.path1 R-ACO-1125804 Aco012472.1.path1 [cytosol] R-ACO-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119300 Glycolipid desaturation none Ananas comosus Aco012481.1.path1 R-ACO-1122451 Aco012481.1.path1 [cytosol] R-ACO-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119460 Isoleucine biosynthesis from threonine none Ananas comosus Aco012481.1.path1 R-ACO-1122451 Aco012481.1.path1 [cytosol] R-ACO-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119486 IAA biosynthesis I none Ananas comosus Aco012481.1.path1 R-ACO-1122451 Aco012481.1.path1 [cytosol] R-ACO-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119600 Valine biosynthesis none Ananas comosus Aco012620.1.path1 R-ACO-9645907 Aco012620.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco012620.1.path1 R-ACO-9645907 Aco012620.1.path1 [nucleoplasm] R-ACO-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675824 DNA replication Initiation none Ananas comosus Aco012625.1.path1 R-ACO-1126387 Aco012625.1.path1 [cytosol] R-ACO-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119295 Homoserine biosynthesis none Ananas comosus Aco012662.1.path1 R-ACO-8868990-2 Aco012662.1.path1 [endoplasmic reticulum membrane] R-ACO-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8868949 Intracellular auxin transport none Ananas comosus Aco012663.1.path1 R-ACO-8868990 Aco012663.1.path1 [endoplasmic reticulum membrane] R-ACO-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8868949 Intracellular auxin transport none Ananas comosus Aco012775.1.path1 R-ACO-5138486 Aco012775.1.path1 [plastid stroma] R-ACO-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119263 Arginine biosynthesis none Ananas comosus Aco012775.1.path1 R-ACO-1123709 Aco012775.1.path1 [cytosol] R-ACO-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119318 Proline biosynthesis V (from arginine) none Ananas comosus Aco012775.1.path1 R-ACO-1123709 Aco012775.1.path1 [cytosol] R-ACO-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119444 Canavanine biosynthesis none Ananas comosus Aco012780.1.path1 R-ACO-1125417 Aco012780.1.path1 [cytosol] R-ACO-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119265 Tetrahydrofolate biosynthesis I none Ananas comosus Aco012780.1.path1 R-ACO-1125417 Aco012780.1.path1 [cytosol] R-ACO-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119523 Tetrahydrofolate biosynthesis II none Ananas comosus Aco012781.1.path1 R-ACO-1127738 Aco012781.1.path1 [cytosol] R-ACO-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119273 Lysine biosynthesis I none Ananas comosus Aco012781.1.path1 R-ACO-1127738 Aco012781.1.path1 [cytosol] R-ACO-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119283 Lysine biosynthesis II none Ananas comosus Aco012781.1.path1 R-ACO-5606514 Aco012781.1.path1 [plastid stroma] R-ACO-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119419 Lysine biosynthesis VI none Ananas comosus Aco012782.1.path1 R-ACO-9639957-2 Aco012782.1.path1 [plasma membrane] R-ACO-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9639861 Development of root hair none Ananas comosus Aco012830.1.path1 R-ACO-5367777 Aco012830.1.path1 [plastid stroma] R-ACO-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5367729 Strigolactone biosynthesis none Ananas comosus Aco012831.1.path1 R-ACO-5138484 Aco012831.1.path1 [plastid stroma] R-ACO-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119263 Arginine biosynthesis none Ananas comosus Aco012831.1.path1 R-ACO-5138484 Aco012831.1.path1 [plastid stroma] R-ACO-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119539 Ornithine biosynthesis none Ananas comosus Aco012831.1.path1 R-ACO-5138484 Aco012831.1.path1 [plastid stroma] R-ACO-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119622 Arginine biosynthesis II (acetyl cycle) none Ananas comosus Aco012856.1.path1 R-ACO-1124032 Aco012856.1.path1 [cytosol] R-ACO-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119540 Leucine biosynthesis none Ananas comosus Aco012883.1.path1 R-ACO-9658589 Aco012883.1.path1 [endoplasmic reticulum lumen] R-ACO-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119502 Allantoin degradation none Ananas comosus Aco012887.1.path1 R-ACO-1128380 Aco012887.1.path1 [plastid stroma] R-ACO-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119430 Chorismate biosynthesis none Ananas comosus Aco012891.1.path1 R-ACO-8933730 Aco012891.1.path1 [nucleoplasm] R-ACO-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8933811 Circadian rhythm none Ananas comosus Aco012896.1.path1 R-ACO-5138481 Aco012896.1.path1 [plastid stroma] R-ACO-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119263 Arginine biosynthesis none Ananas comosus Aco012896.1.path1 R-ACO-5138481 Aco012896.1.path1 [plastid stroma] R-ACO-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119539 Ornithine biosynthesis none Ananas comosus Aco012899.1.path1 R-ACO-1130181 Aco012899.1.path1 [plastid stroma] R-ACO-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119430 Chorismate biosynthesis none Ananas comosus Aco012926.1.path1 R-ACO-9025230 Aco012926.1.path1 [peroxisomal matrix] R-ACO-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119407 Ureide biosynthesis none Ananas comosus Aco012949.1.path1 R-ACO-9638999 Aco012949.1.path1 [cytosol] R-ACO-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119434 Phytic acid biosynthesis (lipid-independent) none Ananas comosus Aco012980.1.path1 R-ACO-1128973-2 Aco012980.1.path1 [cytosol] R-ACO-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Ananas comosus Aco012980.1.path1 R-ACO-1128973-2 Aco012980.1.path1 [cytosol] R-ACO-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119438 Secologanin and strictosidine biosynthesis none Ananas comosus Aco012980.1.path1 R-ACO-1128973-2 Aco012980.1.path1 [cytosol] R-ACO-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119486 IAA biosynthesis I none Ananas comosus Aco012988.1.path1 R-ACO-5608169 Aco012988.1.path1 [nucleoplasm] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco012999.1.path1 R-ACO-5679474 Aco012999.1.path1 [nucleoplasm] R-ACO-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5679411 Gibberellin signaling none Ananas comosus Aco013002.1.path1 R-ACO-1124861 Aco013002.1.path1 [plastid stroma] R-ACO-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119449 Carotenoid biosynthesis none Ananas comosus Aco013015.1.path1 R-ACO-1123525 Aco013015.1.path1 [cytosol] R-ACO-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119384 NAD biosynthesis I (from aspartate) none Ananas comosus Aco013036.1.path1 R-ACO-9918274 SBE1 [amyloplast] R-ACO-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119477 Starch biosynthesis none Ananas comosus Aco013036.1.path1 R-ACO-9626342 Aco013036.1.path1 [plastid stroma] R-ACO-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9626305 Regulatory network of nutrient accumulation none Ananas comosus Aco013079.1.path1 R-ACO-1129187 Aco013079.1.path1 [cytosol] R-ACO-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119276 Choline biosynthesis III none Ananas comosus Aco013100.1.path1 R-ACO-9645954 Aco013100.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco013101.1.path1 R-ACO-1126440 Aco013101.1.path1 [plastid stroma] R-ACO-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119430 Chorismate biosynthesis none Ananas comosus Aco013124.1.path1 R-ACO-1128877 Aco013124.1.path1 [plastid stroma] R-ACO-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119424 Plastid glycolysis none Ananas comosus Aco013124.1.path1 R-ACO-1128877 Aco013124.1.path1 [plastid stroma] R-ACO-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119519 Calvin cycle none Ananas comosus Aco013181.1.path1 R-ACO-5632174 Aco013181.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco013181.1.path1 R-ACO-5632174 Aco013181.1.path1 [nucleoplasm] R-ACO-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5654828 Strigolactone signaling none Ananas comosus Aco013181.1.path1 R-ACO-5632174 Aco013181.1.path1 [nucleoplasm] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco013181.1.path1 R-ACO-5632174 Aco013181.1.path1 [nucleoplasm] R-ACO-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9608575 Reproductive meristem phase change none Ananas comosus Aco013209.1.path1 R-ACO-1124520 Aco013209.1.path1 [cytosol] R-ACO-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119278 PRPP biosynthesis I none Ananas comosus Aco013228.1.path1 R-ACO-8933759 Aco013228.1.path1 [nucleoplasm] R-ACO-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8933811 Circadian rhythm none Ananas comosus Aco013330.1.path1 R-ACO-1128745 Aco013330.1.path1 [plastid stroma] R-ACO-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119464 Methylerythritol phosphate pathway none Ananas comosus Aco013356.1.path1 R-ACO-1122974 Aco013356.1.path1 [mitochondrial matrix] R-ACO-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119479 Valine degradation none Ananas comosus Aco013408.1.path1 R-ACO-1128874 Aco013408.1.path1 [chloroplast] R-ACO-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119494 Tryptophan biosynthesis none Ananas comosus Aco013422.1.path1 R-ACO-1128804 Aco013422.1.path1 [cytosol] R-ACO-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119516 Trehalose biosynthesis I none Ananas comosus Aco013424.1.path1 R-ACO-1125564-5 Aco013424.1.path1 [cytosol] R-ACO-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119291 Nitrate assimilation none Ananas comosus Aco013424.1.path1 R-ACO-1125564-5 Aco013424.1.path1 [cytosol] R-ACO-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119293 Glutamine biosynthesis I none Ananas comosus Aco013424.1.path1 R-ACO-1125564-5 Aco013424.1.path1 [cytosol] R-ACO-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119443 Ammonia assimilation cycle none Ananas comosus Aco013517.1.path1 R-ACO-9025351-2 Aco013517.1.path1 [cytosol] R-ACO-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119402 Phospholipid biosynthesis I none Ananas comosus Aco013520.1.path1 R-ACO-3321260-3 Aco013520.1.path1 [chloroplast stroma] R-ACO-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119287 Vitamin E biosynthesis none Ananas comosus Aco013554.1.path1 R-ACO-1126689 Aco013554.1.path1 [cytosol] R-ACO-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119353 Linear furanocoumarin biosynthesis none Ananas comosus Aco013567.1.path1 R-ACO-1124935 Aco013567.1.path1 [cytosol] R-ACO-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119349 S-methylmethionine cycle none Ananas comosus Aco013581.1.path1 R-ACO-1126488 Aco013581.1.path1 [mitochondrial inner membrane] R-ACO-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119402 Phospholipid biosynthesis I none Ananas comosus Aco013633.1.path1 R-ACO-1129161 Aco013633.1.path1 [amyloplast] R-ACO-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119477 Starch biosynthesis none Ananas comosus Aco013637.1.path1 R-ACO-8933842 Aco013637.1.path1 [cytosol] R-ACO-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8933811 Circadian rhythm none Ananas comosus Aco013637.1.path1 R-ACO-8933843 Aco013637.1.path1 [nucleoplasm] R-ACO-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8933811 Circadian rhythm none Ananas comosus Aco013711.1.path1 R-ACO-9640745 Aco013711.1.path1 [nucleoplasm] R-ACO-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640882 Assembly of pre-replication complex none Ananas comosus Aco013711.1.path1 R-ACO-9640745 Aco013711.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco013711.1.path1 R-ACO-9640745 Aco013711.1.path1 [nucleoplasm] R-ACO-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675824 DNA replication Initiation none Ananas comosus Aco013738.1.path1 R-ACO-1123894 Aco013738.1.path1 [plasma membrane] R-ACO-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119314 Cellulose biosynthesis none Ananas comosus Aco013769.1.path1 R-ACO-6787863 Aco013769.1.path1 [nucleoplasm] R-ACO-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6788019 Salicylic acid signaling none Ananas comosus Aco013815.1.path1 R-ACO-5632261 Aco013815.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco013834.1.path1 R-ACO-8879061 LOS2 homolog [nucleoplasm] R-ACO-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8879007 Response to cold temperature none Ananas comosus Aco013863.1.path1 R-ACO-1126421 Aco013863.1.path1 [cytosol] R-ACO-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119428 GDP-D-rhamnose biosynthesis none Ananas comosus Aco013863.1.path1 R-ACO-1126421 Aco013863.1.path1 [cytosol] R-ACO-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Ananas comosus Aco013872.1.path1 R-ACO-1124788 Aco013872.1.path1 [cytosol] R-ACO-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119601 Trehalose degradation II none Ananas comosus Aco013890.1.path1 R-ACO-1129478 Aco013890.1.path1 [cytosol] R-ACO-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119273 Lysine biosynthesis I none Ananas comosus Aco013890.1.path1 R-ACO-1129478 Aco013890.1.path1 [cytosol] R-ACO-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119283 Lysine biosynthesis II none Ananas comosus Aco013890.1.path1 R-ACO-5606483 Aco013890.1.path1 [plastid stroma] R-ACO-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119419 Lysine biosynthesis VI none Ananas comosus Aco013895.1.path1 R-ACO-1127490 Aco013895.1.path1 [cytosol] R-ACO-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119389 Phenylalanine biosynthesis I none Ananas comosus Aco013911.1.path1 R-ACO-1125610 Aco013911.1.path1 [cytosol] R-ACO-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119276 Choline biosynthesis III none Ananas comosus Aco013937.1.path1 R-ACO-8879002 Aco013937.1.path1 [nucleoplasm] R-ACO-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8879007 Response to cold temperature none Ananas comosus Aco013943.1.path1 R-ACO-1130235 Aco013943.1.path1 [cytosol] R-ACO-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119261 Salicylate biosynthesis none Ananas comosus Aco013943.1.path1 R-ACO-1130235 Aco013943.1.path1 [cytosol] R-ACO-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119418 Suberin biosynthesis none Ananas comosus Aco013943.1.path1 R-ACO-1130235 Aco013943.1.path1 [cytosol] R-ACO-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119582 Phenylpropanoid biosynthesis, initial reactions none Ananas comosus Aco013950.1.path1 R-ACO-5608129 Aco013950.1.path1 [nucleoplasm] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco013958.1.path1 R-ACO-1123296 Aco013958.1.path1 [chloroplast envelope] R-ACO-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119402 Phospholipid biosynthesis I none Ananas comosus Aco013980.1.path1 R-ACO-1125989 Aco013980.1.path1 [cytosol] R-ACO-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119438 Secologanin and strictosidine biosynthesis none Ananas comosus Aco013990.1.path1 R-ACO-5606478 Aco013990.1.path1 [plastid stroma] R-ACO-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119419 Lysine biosynthesis VI none Ananas comosus Aco014001.1.path1 R-ACO-1127161 Aco014001.1.path1 [cytosol] R-ACO-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119486 IAA biosynthesis I none Ananas comosus Aco014040.1.path1 R-ACO-1126344 Aco014040.1.path1 [plastid stroma] R-ACO-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119529 Sulfate activation for sulfonation none Ananas comosus Aco014066.1.path1 R-ACO-5631969 Aco014066.1.path1 [mitochondrial matrix] R-ACO-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119289 Arginine degradation none Ananas comosus Aco014066.1.path1 R-ACO-5633275 Aco014066.1.path1 [cytosol] R-ACO-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119495 Citrulline biosynthesis none Ananas comosus Aco014099.1.path1 R-ACO-8858070 Aco014099.1.path1 [plasma membrane] R-ACO-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9639861 Development of root hair none Ananas comosus Aco014102.1.path1 R-ACO-9640886 Aco014102.1.path1 [nucleoplasm] R-ACO-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640882 Assembly of pre-replication complex none Ananas comosus Aco014102.1.path1 R-ACO-9640886 Aco014102.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco014119.1.path1 R-ACO-5149683 Aco014119.1.path1 [plastid stroma] R-ACO-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119519 Calvin cycle none Ananas comosus Aco014162.1.path1 R-ACO-1127539 Aco014162.1.path1 [cytosol] R-ACO-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Ananas comosus Aco014162.1.path1 R-ACO-1127539 Aco014162.1.path1 [cytosol] R-ACO-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119439 Cholesterol biosynthesis III (via desmosterol) none Ananas comosus Aco014162.1.path1 R-ACO-1127539 Aco014162.1.path1 [cytosol] R-ACO-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119559 Cholesterol biosynthesis I none Ananas comosus Aco014192.1.path1 R-ACO-9611544 SPL11 [nucleoplasm] R-ACO-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9611432 Recognition of fungal and bacterial pathogens and immunity response none Ananas comosus Aco014192.1.path1 R-ACO-9611440 phospho-phosphorylated-SPL11 [nucleoplasm] R-ACO-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9611432 Recognition of fungal and bacterial pathogens and immunity response none Ananas comosus Aco014232.1.path1 R-ACO-1124274 Aco014232.1.path1 [cytosol] R-ACO-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119513 Pinobanksin biosynthesis none Ananas comosus Aco014232.1.path1 R-ACO-1124274 Aco014232.1.path1 [cytosol] R-ACO-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119531 Flavonoid biosynthesis none Ananas comosus Aco014234.1.path1 R-ACO-3240748 Aco014234.1.path1 [cytosol] R-ACO-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Ananas comosus Aco014266.1.path1 R-ACO-1122471 Aco014266.1.path1 [cytosol] R-ACO-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119276 Choline biosynthesis III none Ananas comosus Aco014283.1.path1 R-ACO-1130088 Aco014283.1.path1 [plasma membrane] R-ACO-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119314 Cellulose biosynthesis none Ananas comosus Aco014373.1.path1 R-ACO-6787113 Aco014373.1.path1 [nucleoplasm] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco014378.1.path1 R-ACO-5632120 Aco014378.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco014402.1.path1 R-ACO-9025487-2 Aco014402.1.path1 [cytosol] R-ACO-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119325 Sphingolipid metabolism none Ananas comosus Aco014406.1.path1 R-ACO-1129208 Aco014406.1.path1 [chloroplast envelope] R-ACO-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119402 Phospholipid biosynthesis I none Ananas comosus Aco014490.1.path1 R-ACO-1128069 Aco014490.1.path1 [cytosol] R-ACO-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Ananas comosus Aco014490.1.path1 R-ACO-1128069 Aco014490.1.path1 [cytosol] R-ACO-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Ananas comosus Aco014553.1.path1 R-ACO-1125550 Aco014553.1.path1 [cytosol] R-ACO-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119623 Acyl-CoA synthetase pathway none Ananas comosus Aco014563.1.path1 R-ACO-1123596 Aco014563.1.path1 [plastid stroma] R-ACO-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119509 Histidine biosynthesis I none Ananas comosus Aco014574.1.path1 R-ACO-9640789-2 Aco014574.1.path1 [nucleoplasm] R-ACO-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640760 G1 phase none Ananas comosus Aco014579.1.path1 R-ACO-5683263 Aco014579.1.path1 [cytosol] R-ACO-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119586 Cyanate degradation none Ananas comosus Aco014585.1.path1 R-ACO-1128528 Aco014585.1.path1 [plasma membrane] R-ACO-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119314 Cellulose biosynthesis none Ananas comosus Aco014613.1.path1 R-ACO-1129569 Aco014613.1.path1 [cytosol] R-ACO-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119379 Flavin biosynthesis none Ananas comosus Aco014628.1.path1 R-ACO-5655057 Aco014628.1.path1 [Golgi lumen] R-ACO-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5655101 Xyloglucan biosynthesis none Ananas comosus Aco014646.1.path1 R-ACO-9826654 Aco014646.1.path1 [nucleoplasm] R-ACO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Ananas comosus Aco014656.1.path1 R-ACO-1125564-4 Aco014656.1.path1 [cytosol] R-ACO-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119291 Nitrate assimilation none Ananas comosus Aco014656.1.path1 R-ACO-1125564-4 Aco014656.1.path1 [cytosol] R-ACO-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119293 Glutamine biosynthesis I none Ananas comosus Aco014656.1.path1 R-ACO-1125564-4 Aco014656.1.path1 [cytosol] R-ACO-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119443 Ammonia assimilation cycle none Ananas comosus Aco014693.1.path1 R-ACO-9618131 Aco014693.1.path1 [plasma membrane] R-ACO-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9618218 Arsenic uptake and detoxification none Ananas comosus Aco014738.1.path1 R-ACO-5632114 Aco014738.1.path1 [cytosol] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco014740.1.path1 R-ACO-1128950 Aco014740.1.path1 [cytosol] R-ACO-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119379 Flavin biosynthesis none Ananas comosus Aco014760.1.path1 R-ACO-5655083 Aco014760.1.path1 [Golgi lumen] R-ACO-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5655101 Xyloglucan biosynthesis none Ananas comosus Aco014765.1.path1 R-ACO-4754219 Aco014765.1.path1 [plastid stroma] R-ACO-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119449 Carotenoid biosynthesis none Ananas comosus Aco014784.1.path1 R-ACO-1127019 Aco014784.1.path1 [cytosol] R-ACO-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119458 Glutamate degradation none Ananas comosus Aco014785.1.path1 R-ACO-1122843 Aco014785.1.path1 [cytosol] R-ACO-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119458 Glutamate degradation none Ananas comosus Aco014794.1.path1 R-ACO-1124087 Aco014794.1.path1 [cytosol] R-ACO-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119332 Jasmonic acid biosynthesis none Ananas comosus Aco014794.1.path1 R-ACO-1124087 Aco014794.1.path1 [cytosol] R-ACO-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119618 13-LOX and 13-HPL pathway none Ananas comosus Aco014801.1.path1 R-ACO-1125584 Aco014801.1.path1 [plastid stroma] R-ACO-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119509 Histidine biosynthesis I none Ananas comosus Aco014818.1.path1 R-ACO-8879040 Aco014818.1.path1 [nucleoplasm] R-ACO-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8879007 Response to cold temperature none Ananas comosus Aco014828.1.path1 R-ACO-9618186 Aco014828.1.path1 [plant-type vacuole membrane] R-ACO-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9618218 Arsenic uptake and detoxification none Ananas comosus Aco014831.1.path1 R-ACO-5608154 Aco014831.1.path1 [nucleoplasm] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco014842.1.path1 R-ACO-8987488 Aco014842.1.path1 [mitochondrial matrix] R-ACO-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119312 Photorespiration none Ananas comosus Aco014864.1.path1 R-ACO-9918175 Aco014864.1.path1 [amyloplast] R-ACO-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119477 Starch biosynthesis none Ananas comosus Aco014897.1.path1 R-ACO-1130189 Aco014897.1.path1 [cytosol] R-ACO-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Ananas comosus Aco014897.1.path1 R-ACO-1130189 Aco014897.1.path1 [cytosol] R-ACO-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119438 Secologanin and strictosidine biosynthesis none Ananas comosus Aco014897.1.path1 R-ACO-1130189 Aco014897.1.path1 [cytosol] R-ACO-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119486 IAA biosynthesis I none Ananas comosus Aco014911.1.path1 R-ACO-3315084-2 Aco014911.1.path1 [cytosol] R-ACO-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119342 Gamma-glutamyl cycle none Ananas comosus Aco014922.1.path1 R-ACO-1128337 Aco014922.1.path1 [plastid stroma] R-ACO-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119308 Momilactone biosynthesis none Ananas comosus Aco014922.1.path1 R-ACO-1128244 Aco014922.1.path1 [chloroplast] R-ACO-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119348 Ent-kaurene biosynthesis none Ananas comosus Aco014939.1.path1 R-ACO-5679398 Aco014939.1.path1 [cytosol] R-ACO-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5679411 Gibberellin signaling none Ananas comosus Aco014946.1.path1 R-ACO-4723654 Aco014946.1.path1 [plastid stroma] R-ACO-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119464 Methylerythritol phosphate pathway none Ananas comosus Aco014946.1.path1 R-ACO-1130030 Aco014946.1.path1 [cytosol] R-ACO-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119594 Pyridoxal 5'-phosphate biosynthesis none Ananas comosus Aco014946.1.path1 R-ACO-1130030 Aco014946.1.path1 [cytosol] R-ACO-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119629 Thiamine biosynthesis none Ananas comosus Aco015008.1.path1 R-ACO-9927865 Aco015008.1.path1 [nucleoplasm] R-ACO-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8934257 Transition from vegetative to reproductive shoot apical meristem none Ananas comosus Aco015073.1.path1 R-ACO-1123690 Aco015073.1.path1 [nucleoplasm] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco015203.1.path1 R-ACO-5632264 Aco015203.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco015262.1.path1 R-ACO-1129514 Aco015262.1.path1 [chloroplast] R-ACO-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119579 Glycine betaine biosynthesis III none Ananas comosus Aco015291.1.path1 R-ACO-1125533 Aco015291.1.path1 [cytosol] R-ACO-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119304 Putrescine biosynthesis II none Ananas comosus Aco015298.1.path1 R-ACO-1123161 Aco015298.1.path1 [chloroplast] R-ACO-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119494 Tryptophan biosynthesis none Ananas comosus Aco015317.1.path1 R-ACO-1127414 Aco015317.1.path1 [cytosol] R-ACO-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119265 Tetrahydrofolate biosynthesis I none Ananas comosus Aco015338.1.path1 R-ACO-9030976-2 Aco015338.1.path1 [nucleoplasm] R-ACO-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5654828 Strigolactone signaling none Ananas comosus Aco015338.1.path1 R-ACO-9030976-2 Aco015338.1.path1 [nucleoplasm] R-ACO-9030908 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9030908 Underwater shoot and internode elongation none Ananas comosus Aco015338.1.path1 R-ACO-9030976-2 Aco015338.1.path1 [nucleoplasm] R-ACO-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9035605 Regulation of seed size none Ananas comosus Aco015338.1.path1 R-ACO-9035631-2 Aco015338.1.path1 [cytosol] R-ACO-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9035605 Regulation of seed size none Ananas comosus Aco015338.1.path1 R-ACO-9030976-2 Aco015338.1.path1 [nucleoplasm] R-ACO-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9608575 Reproductive meristem phase change none Ananas comosus Aco015338.1.path1 R-ACO-9035631-2 Aco015338.1.path1 [cytosol] R-ACO-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9608575 Reproductive meristem phase change none Ananas comosus Aco015345.1.path1 R-ACO-1130152 Aco015345.1.path1 [cytosol] R-ACO-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119394 Pantothenate and coenzyme A biosynthesis III none Ananas comosus Aco015385.1.path1 R-ACO-6787181 Aco015385.1.path1 [cytosol] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco015398.1.path1 R-ACO-1124269 Aco015398.1.path1 [cytosol] R-ACO-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119456 Brassinosteroid biosynthesis II none Ananas comosus Aco015429.1.path1 R-ACO-1123261 Aco015429.1.path1 [cytosol] R-ACO-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119410 Ascorbate biosynthesis none Ananas comosus Aco015432.1.path1 R-ACO-4415078 Aco015432.1.path1 [cytosol] R-ACO-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-3899351 Abscisic acid (ABA) mediated signaling none Ananas comosus Aco015453.1.path1 R-ACO-5149632 Aco015453.1.path1 [plastid stroma] R-ACO-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119519 Calvin cycle none Ananas comosus Aco015482.1.path1 R-ACO-1126172 Aco015482.1.path1 [cytosol] R-ACO-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119379 Flavin biosynthesis none Ananas comosus Aco015517.1.path1 R-ACO-1129892 Aco015517.1.path1 [cytosol] R-ACO-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119334 Ethylene biosynthesis from methionine none Ananas comosus Aco015517.1.path1 R-ACO-1129892 Aco015517.1.path1 [cytosol] R-ACO-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119624 Methionine salvage pathway none Ananas comosus Aco015533.1.path1 R-ACO-1122373 Aco015533.1.path1 [cytosol] R-ACO-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119304 Putrescine biosynthesis II none Ananas comosus Aco015533.1.path1 R-ACO-1122373 Aco015533.1.path1 [cytosol] R-ACO-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119447 Putrescine biosynthesis I none Ananas comosus Aco015534.1.path1 R-ACO-1122373-2 Aco015534.1.path1 [cytosol] R-ACO-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119304 Putrescine biosynthesis II none Ananas comosus Aco015534.1.path1 R-ACO-1122373-2 Aco015534.1.path1 [cytosol] R-ACO-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119447 Putrescine biosynthesis I none Ananas comosus Aco015536.1.path1 R-ACO-1125093 Aco015536.1.path1 [cytosol] R-ACO-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119456 Brassinosteroid biosynthesis II none Ananas comosus Aco015541.1.path1 R-ACO-3899389 Aco015541.1.path1 [plasma membrane] R-ACO-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-3899351 Abscisic acid (ABA) mediated signaling none Ananas comosus Aco015541.1.path1 R-ACO-3899371 phospho-Aco015541.1.path1 [plasma membrane] R-ACO-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-3899351 Abscisic acid (ABA) mediated signaling none Ananas comosus Aco015578.1.path1 R-ACO-9675851 Aco015578.1.path1 [nucleoplasm] R-ACO-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675815 Leading strand synthesis none Ananas comosus Aco015584.1.path1 R-ACO-1126671 Aco015584.1.path1 [cytosol] R-ACO-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119534 Pyridoxal 5'-phosphate salvage pathway none Ananas comosus Aco015584.1.path1 R-ACO-1126671 Aco015584.1.path1 [cytosol] R-ACO-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119594 Pyridoxal 5'-phosphate biosynthesis none Ananas comosus Aco015620.1.path1 R-ACO-1122849 Aco015620.1.path1 [mitochondrion] R-ACO-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119506 tyrosine degradation I none Ananas comosus Aco015622.1.path1 R-ACO-5632251 Aco015622.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco015670.1.path1 R-ACO-1129769-2 Aco015670.1.path1 [cytosol] R-ACO-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119332 Jasmonic acid biosynthesis none Ananas comosus Aco015670.1.path1 R-ACO-1129769-2 Aco015670.1.path1 [cytosol] R-ACO-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119618 13-LOX and 13-HPL pathway none Ananas comosus Aco015672.1.path1 R-ACO-1129769 Aco015672.1.path1 [cytosol] R-ACO-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119332 Jasmonic acid biosynthesis none Ananas comosus Aco015672.1.path1 R-ACO-1129769 Aco015672.1.path1 [cytosol] R-ACO-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119618 13-LOX and 13-HPL pathway none Ananas comosus Aco015687.1.path1 R-ACO-1129055 Aco015687.1.path1 [mitochondrial matrix] R-ACO-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119533 TCA cycle (plant) none Ananas comosus Aco015712.1.path1 R-ACO-5083827-2 Aco015712.1.path1 [mitochondrial matrix] R-ACO-1119319 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119319 Alanine biosynthesis III none Ananas comosus Aco015712.1.path1 R-ACO-5083827-2 Aco015712.1.path1 [mitochondrial matrix] R-ACO-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119612 Cysteine degradation none Ananas comosus Aco015729.1.path1 R-ACO-1126421-2 Aco015729.1.path1 [cytosol] R-ACO-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119428 GDP-D-rhamnose biosynthesis none Ananas comosus Aco015729.1.path1 R-ACO-1126421-2 Aco015729.1.path1 [cytosol] R-ACO-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Ananas comosus Aco015869.1.path1 R-ACO-1123895 Aco015869.1.path1 [cytosol] R-ACO-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119334 Ethylene biosynthesis from methionine none Ananas comosus Aco015869.1.path1 R-ACO-1123895 Aco015869.1.path1 [cytosol] R-ACO-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119624 Methionine salvage pathway none Ananas comosus Aco015873.1.path1 R-ACO-9631619 Aco015873.1.path1 [nucleoplasm] R-ACO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Ananas comosus Aco015881.1.path1 R-ACO-9639029 Aco015881.1.path1 [cytosol] R-ACO-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119434 Phytic acid biosynthesis (lipid-independent) none Ananas comosus Aco015885.1.path1 R-ACO-9927759 Aco015885.1.path1 [nucleoplasm] R-ACO-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8934036 Long day regulated expression of florigens none Ananas comosus Aco015969.1.path1 R-ACO-1123609 Aco015969.1.path1 [plasma membrane] R-ACO-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119314 Cellulose biosynthesis none Ananas comosus Aco015987.1.path1 R-ACO-8854452 Aco015987.1.path1 [cytosol] R-ACO-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119276 Choline biosynthesis III none Ananas comosus Aco016034.1.path1 R-ACO-1128857 Aco016034.1.path1 [cytosol] R-ACO-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119609 Phaseic acid biosynthesis none Ananas comosus Aco016038.1.path1 R-ACO-8933833-2 Aco016038.1.path1 [nucleoplasm] R-ACO-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8933811 Circadian rhythm none Ananas comosus Aco016038.1.path1 R-ACO-8933833-2 Aco016038.1.path1 [nucleoplasm] R-ACO-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9928995 Drought escape (DE) via ABA-dependent pathway none Ananas comosus Aco016112.1.path1 R-ACO-1129029 Aco016112.1.path1 [cytosol] R-ACO-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119501 S-adenosyl-L-methionine cycle none Ananas comosus Aco016193.1.path1 R-ACO-9640734 Aco016193.1.path1 [nucleoplasm] R-ACO-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640887 G1/S transition none Ananas comosus Aco016193.1.path1 R-ACO-9640881 phospho-Aco016193.1.path1 [nucleoplasm] R-ACO-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640887 G1/S transition none Ananas comosus Aco016200.1.path1 R-ACO-1126354 Aco016200.1.path1 [cytosol] R-ACO-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119513 Pinobanksin biosynthesis none Ananas comosus Aco016200.1.path1 R-ACO-1126354 Aco016200.1.path1 [cytosol] R-ACO-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119531 Flavonoid biosynthesis none Ananas comosus Aco016200.1.path1 R-ACO-1126354 Aco016200.1.path1 [cytosol] R-ACO-1119630 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119630 Resveratrol biosynthesis none Ananas comosus Aco016253.1.path1 R-ACO-9618171-2 Aco016253.1.path1 [plasma membrane] R-ACO-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9618218 Arsenic uptake and detoxification none Ananas comosus Aco016257.1.path1 R-ACO-9826692 Aco016257.1.path1 [nucleoplasm] R-ACO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Ananas comosus Aco016281.1.path1 R-ACO-1122855 Aco016281.1.path1 [cytosol] R-ACO-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119360 Fructan biosynthesis none Ananas comosus Aco016323.1.path1 R-ACO-9025541 Aco016323.1.path1 [endoplasmic reticulum membrane] R-ACO-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119325 Sphingolipid metabolism none Ananas comosus Aco016364.1.path1 R-ACO-9640731 Aco016364.1.path1 [nucleoplasm] R-ACO-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640882 Assembly of pre-replication complex none Ananas comosus Aco016397.1.path1 R-ACO-9916252 OsEGT1 [nucleoplasm] R-ACO-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9916190 Root angle formation: elongation and curvature response none Ananas comosus Aco016403.1.path1 R-ACO-1127502 Aco016403.1.path1 [cytosol] R-ACO-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119394 Pantothenate and coenzyme A biosynthesis III none Ananas comosus Aco016409.1.path1 R-ACO-1126916 Aco016409.1.path1 [plastid stroma] R-ACO-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119464 Methylerythritol phosphate pathway none Ananas comosus Aco016412.1.path1 R-ACO-1125340 Aco016412.1.path1 [plastid stroma] R-ACO-1119274 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119274 Monoterpene biosynthesis none Ananas comosus Aco016412.1.path1 R-ACO-1125340 Aco016412.1.path1 [plastid stroma] R-ACO-1119593 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119593 Oleoresin monoterpene volatiles biosynthesis none Ananas comosus Aco016417.1.path1 R-ACO-1125447 Aco016417.1.path1 [plastid stroma] R-ACO-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119509 Histidine biosynthesis I none Ananas comosus Aco016421.1.path1 R-ACO-1124270 Aco016421.1.path1 [cytosol] R-ACO-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119615 Mevalonate pathway none Ananas comosus Aco016535.1.path1 R-ACO-6787185 Aco016535.1.path1 [nucleoplasm] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco016554.1.path1 R-ACO-1125532 Aco016554.1.path1 [cytosol] R-ACO-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119276 Choline biosynthesis III none Ananas comosus Aco016559.1.path1 R-ACO-5632241 Aco016559.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco016569.1.path1 R-ACO-5146760 Aco016569.1.path1 [mitochondrial matrix] R-ACO-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119533 TCA cycle (plant) none Ananas comosus Aco016600.1.path1 R-ACO-1126238 Aco016600.1.path1 [chloroplast] R-ACO-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119494 Tryptophan biosynthesis none Ananas comosus Aco016608.1.path1 R-ACO-6788007 Aco016608.1.path1 [cytosol] R-ACO-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6788019 Salicylic acid signaling none Ananas comosus Aco016635.1.path1 R-ACO-9639892 Aco016635.1.path1 [cell wall] R-ACO-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9639861 Development of root hair none Ananas comosus Aco016643.1.path1 R-ACO-8934063 Aco016643.1.path1 [nucleoplasm] R-ACO-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8934036 Long day regulated expression of florigens none Ananas comosus Aco016643.1.path1 R-ACO-8934063 Aco016643.1.path1 [nucleoplasm] R-ACO-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8934108 Short day regulated expression of florigens none Ananas comosus Aco016643.1.path1 R-ACO-8934063 Aco016643.1.path1 [nucleoplasm] R-ACO-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9928946 Drought escape (DE) via ABA-independent pathway none Ananas comosus Aco016702.1.path1 R-ACO-5655070-2 Aco016702.1.path1 [Golgi lumen] R-ACO-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5655101 Xyloglucan biosynthesis none Ananas comosus Aco016723.1.path1 R-ACO-6788085 Aco016723.1.path1 [nucleoplasm] R-ACO-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6788019 Salicylic acid signaling none Ananas comosus Aco016743.1.path1 R-ACO-1130332 Aco016743.1.path1 [cytosol] R-ACO-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119531 Flavonoid biosynthesis none Ananas comosus Aco016804.1.path1 R-ACO-3315084 Aco016804.1.path1 [cytosol] R-ACO-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119342 Gamma-glutamyl cycle none Ananas comosus Aco016808.1.path1 R-ACO-9675820 Aco016808.1.path1 [nucleoplasm] R-ACO-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675824 DNA replication Initiation none Ananas comosus Aco016809.1.path1 R-ACO-9611477 phospho-phosphorylated-RLCK176 [cytosol] R-ACO-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9611432 Recognition of fungal and bacterial pathogens and immunity response none Ananas comosus Aco016849.1.path1 R-ACO-1125928 Aco016849.1.path1 [cytosol] R-ACO-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119484 Folate polyglutamylation II none Ananas comosus Aco016849.1.path1 R-ACO-1125928 Aco016849.1.path1 [cytosol] R-ACO-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119523 Tetrahydrofolate biosynthesis II none Ananas comosus Aco016849.1.path1 R-ACO-1125928 Aco016849.1.path1 [cytosol] R-ACO-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119617 Folate polyglutamylation I none Ananas comosus Aco016862.1.path1 R-ACO-1127082 Aco016862.1.path1 [plastid stroma] R-ACO-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119519 Calvin cycle none Ananas comosus Aco016866.1.path1 R-ACO-9640689-2 Aco016866.1.path1 [nucleoplasm] R-ACO-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675782 Maturation none Ananas comosus Aco016866.1.path1 R-ACO-9640689-2 Aco016866.1.path1 [nucleoplasm] R-ACO-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675815 Leading strand synthesis none Ananas comosus Aco016866.1.path1 R-ACO-9640689-2 Aco016866.1.path1 [nucleoplasm] R-ACO-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675885 Lagging strand synthesis none Ananas comosus Aco016935.1.path1 R-ACO-1128200 Aco016935.1.path1 [cytosol] R-ACO-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119316 Phenylpropanoid biosynthesis none Ananas comosus Aco016943.1.path1 R-ACO-1124786 Aco016943.1.path1 [cytosol] R-ACO-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119276 Choline biosynthesis III none Ananas comosus Aco016947.1.path1 R-ACO-1128431 Aco016947.1.path1 [cytosol] R-ACO-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119316 Phenylpropanoid biosynthesis none Ananas comosus Aco016993.1.path1 R-ACO-1122783 Aco016993.1.path1 [chloroplast stroma] R-ACO-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119402 Phospholipid biosynthesis I none Ananas comosus Aco016995.1.path1 R-ACO-1127398-2 Aco016995.1.path1 [plasma membrane] R-ACO-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119314 Cellulose biosynthesis none Ananas comosus Aco016995.1.path1 R-ACO-1127398-2 Aco016995.1.path1 [plasma membrane] R-ACO-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9639861 Development of root hair none Ananas comosus Aco017001.1.path1 R-ACO-8854448 Aco017001.1.path1 [cytosol] R-ACO-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119276 Choline biosynthesis III none Ananas comosus Aco017012.1.path1 R-ACO-1123046 Aco017012.1.path1 [cytosol] R-ACO-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119386 UDP-N-acetylgalactosamine biosynthesis none Ananas comosus Aco017032.1.path1 R-ACO-9640716 Aco017032.1.path1 [nucleoplasm] R-ACO-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9030654 Primary root development none Ananas comosus Aco017032.1.path1 R-ACO-9640716 Aco017032.1.path1 [nucleoplasm] R-ACO-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640882 Assembly of pre-replication complex none Ananas comosus Aco017032.1.path1 R-ACO-9640716 Aco017032.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco017051.1.path1 R-ACO-9924558 NCED1 [plastid] R-ACO-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Ananas comosus Aco017076.1.path1 R-ACO-1127443 Aco017076.1.path1 [amyloplast] R-ACO-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119477 Starch biosynthesis none Ananas comosus Aco017076.1.path1 R-ACO-1122818 Aco017076.1.path1 [cytosol] R-ACO-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119477 Starch biosynthesis none Ananas comosus Aco017091.1.path1 R-ACO-1125926 Aco017091.1.path1 [cytosol] R-ACO-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119273 Lysine biosynthesis I none Ananas comosus Aco017091.1.path1 R-ACO-1125926 Aco017091.1.path1 [cytosol] R-ACO-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119283 Lysine biosynthesis II none Ananas comosus Aco017091.1.path1 R-ACO-1125926 Aco017091.1.path1 [cytosol] R-ACO-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119295 Homoserine biosynthesis none Ananas comosus Aco017091.1.path1 R-ACO-5606498 Aco017091.1.path1 [plastid stroma] R-ACO-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119419 Lysine biosynthesis VI none Ananas comosus Aco017103.1.path1 R-ACO-1129879 Aco017103.1.path1 [cytosol] R-ACO-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119436 Peptidoglycan biosynthesis I none Ananas comosus Aco017129.1.path1 R-ACO-1127820 Aco017129.1.path1 [plasma membrane] R-ACO-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119314 Cellulose biosynthesis none Ananas comosus Aco017142.1.path1 R-ACO-8987467 Aco017142.1.path1 [chloroplast] R-ACO-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119502 Allantoin degradation none Ananas comosus Aco017209.1.path1 R-ACO-9916298-2 OsEXPA3 [extracellular region] R-ACO-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9916190 Root angle formation: elongation and curvature response none Ananas comosus Aco017232.1.path1 R-ACO-1128857-2 Aco017232.1.path1 [cytosol] R-ACO-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119609 Phaseic acid biosynthesis none Ananas comosus Aco017237.1.path1 R-ACO-9675866 Aco017237.1.path1 [nucleoplasm] R-ACO-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675782 Maturation none Ananas comosus Aco017237.1.path1 R-ACO-9675866 Aco017237.1.path1 [nucleoplasm] R-ACO-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675815 Leading strand synthesis none Ananas comosus Aco017237.1.path1 R-ACO-9675866 Aco017237.1.path1 [nucleoplasm] R-ACO-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675885 Lagging strand synthesis none Ananas comosus Aco017246.1.path1 R-ACO-9025500 Aco017246.1.path1 [endoplasmic reticulum membrane] R-ACO-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119325 Sphingolipid metabolism none Ananas comosus Aco017282.1.path1 R-ACO-5149678 Aco017282.1.path1 [plastid stroma] R-ACO-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119519 Calvin cycle none Ananas comosus Aco017300.1.path1 R-ACO-1127989 Aco017300.1.path1 [plastid stroma] R-ACO-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119430 Chorismate biosynthesis none Ananas comosus Aco017378.1.path1 R-ACO-1124348 Aco017378.1.path1 [cytosol] R-ACO-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119465 Sucrose biosynthesis none Ananas comosus Aco017393.1.path1 R-ACO-1129781 Aco017393.1.path1 [chloroplast] R-ACO-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119494 Tryptophan biosynthesis none Ananas comosus Aco017436.1.path1 R-ACO-5655007 Aco017436.1.path1 [Golgi lumen] R-ACO-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5655010 Xylogalacturonan biosynthesis none Ananas comosus Aco017439.1.path1 R-ACO-1126269 Aco017439.1.path1 [mitochondrial matrix] R-ACO-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119479 Valine degradation none Ananas comosus Aco017477.1.path1 R-ACO-8987554 Aco017477.1.path1 [mitochondrial matrix] R-ACO-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119312 Photorespiration none Ananas comosus Aco017478.1.path1 R-ACO-1125766 Aco017478.1.path1 [cytosol] R-ACO-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119557 GA12 biosynthesis none Ananas comosus Aco017493.1.path1 R-ACO-9609608 Aco017493.1.path1 [cytosol] R-ACO-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9609573 Tricin biosynthesis none Ananas comosus Aco017493.1.path1 R-ACO-9916171 OsOMT [cytosol] R-ACO-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9916190 Root angle formation: elongation and curvature response none Ananas comosus Aco017493.1.path1 R-ACO-9916312 OsOMT [nucleoplasm] R-ACO-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9916190 Root angle formation: elongation and curvature response none Ananas comosus Aco017511.1.path1 R-ACO-5633332 Aco017511.1.path1 [plastid stroma] R-ACO-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5633340 Citrulline-nitric oxide cycle none Ananas comosus Aco017533.1.path1 R-ACO-1126888 Aco017533.1.path1 [cytosol] R-ACO-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119360 Fructan biosynthesis none Ananas comosus Aco017628.1.path1 R-ACO-1125877 Aco017628.1.path1 [cytosol] R-ACO-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119456 Brassinosteroid biosynthesis II none Ananas comosus Aco017683.1.path1 R-ACO-9681885 Aco017683.1.path1 [Golgi membrane] R-ACO-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119574 UDP-L-arabinose biosynthesis and transport none Ananas comosus Aco017712.1.path1 R-ACO-5654756-2 Aco017712.1.path1 [cytosol] R-ACO-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119281 Aspartate biosynthesis I none Ananas comosus Aco017712.1.path1 R-ACO-1123648-2 Aco017712.1.path1 [plastid] R-ACO-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119506 tyrosine degradation I none Ananas comosus Aco017712.1.path1 R-ACO-5631992-2 Aco017712.1.path1 [plastid stroma] R-ACO-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119553 Asparagine biosynthesis none Ananas comosus Aco017741.1.path1 R-ACO-1124757 Aco017741.1.path1 [cytosol] R-ACO-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119465 Sucrose biosynthesis none Ananas comosus Aco017741.1.path1 R-ACO-1124757 Aco017741.1.path1 [cytosol] R-ACO-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119477 Starch biosynthesis none Ananas comosus Aco017742.1.path1 R-ACO-9025513 Aco017742.1.path1 [endoplasmic reticulum membrane] R-ACO-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119325 Sphingolipid metabolism none Ananas comosus Aco017742.1.path1 R-ACO-1129700 Aco017742.1.path1 [cytosol] R-ACO-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119610 Biotin biosynthesis II none Ananas comosus Aco017757.1.path1 R-ACO-1130456 Aco017757.1.path1 [plastid stroma] R-ACO-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119430 Chorismate biosynthesis none Ananas comosus Aco017820.1.path1 R-ACO-9025471 Aco017820.1.path1 [endoplasmic reticulum membrane] R-ACO-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119325 Sphingolipid metabolism none Ananas comosus Aco017820.1.path1 R-ACO-1127934 Aco017820.1.path1 [cytosol] R-ACO-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119610 Biotin biosynthesis II none Ananas comosus Aco017824.1.path1 R-ACO-5608203 Aco017824.1.path1 [nucleoplasm] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco017824.1.path1 R-ACO-5608203 Aco017824.1.path1 [nucleoplasm] R-ACO-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9608575 Reproductive meristem phase change none Ananas comosus Aco017824.1.path1 R-ACO-9658968 Aco017824.1.path1 [cytosol] R-ACO-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9608575 Reproductive meristem phase change none Ananas comosus Aco017871.1.path1 R-ACO-6787084 Aco017871.1.path1 [cytosol] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco017897.1.path1 R-ACO-9924413 WOX6 [nucleoplasm] R-ACO-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9924451 Shoot (tiller) formation and regulation of tiller angle none Ananas comosus Aco017952.1.path1 R-ACO-1128812 Aco017952.1.path1 [cytosol] R-ACO-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119393 Asparagine degradation I none Ananas comosus Aco018042.1.path1 R-ACO-1124956 Aco018042.1.path1 [cytosol] R-ACO-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119276 Choline biosynthesis III none Ananas comosus Aco018061.1.path1 R-ACO-5608212 Aco018061.1.path1 [nucleoplasm] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco018061.1.path1 R-ACO-5608212 Aco018061.1.path1 [nucleoplasm] R-ACO-9675304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675304 Lateral root emergence none Ananas comosus Aco018097.1.path1 R-ACO-1123745 Aco018097.1.path1 [endoplasmic reticulum membrane] R-ACO-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119260 Cardiolipin biosynthesis none Ananas comosus Aco018097.1.path1 R-ACO-1123745 Aco018097.1.path1 [endoplasmic reticulum membrane] R-ACO-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119402 Phospholipid biosynthesis I none Ananas comosus Aco018144.1.path1 R-ACO-8986682 Aco018144.1.path1 [extracellular region] R-ACO-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8986768 Anther and pollen development none Ananas comosus Aco018220.1.path1 R-ACO-9645950 Aco018220.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco018220.1.path1 R-ACO-9645950 Aco018220.1.path1 [nucleoplasm] R-ACO-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675815 Leading strand synthesis none Ananas comosus Aco018220.1.path1 R-ACO-9645950 Aco018220.1.path1 [nucleoplasm] R-ACO-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675824 DNA replication Initiation none Ananas comosus Aco018220.1.path1 R-ACO-9645950 Aco018220.1.path1 [nucleoplasm] R-ACO-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675885 Lagging strand synthesis none Ananas comosus Aco018278.1.path1 R-ACO-9930249 Aco018278.1.path1 [nucleoplasm] R-ACO-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9766881 TF network involved in salinity response none Ananas comosus Aco018320.1.path1 R-ACO-1130059 Aco018320.1.path1 [cytosol] R-ACO-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119262 Threonine biosynthesis from homoserine none Ananas comosus Aco018336.1.path1 R-ACO-8854127 Aco018336.1.path1 [cytosol] R-ACO-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119556 Choline biosynthesis I none Ananas comosus Aco018356.1.path1 R-ACO-1127357 Aco018356.1.path1 [cytosol] R-ACO-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119273 Lysine biosynthesis I none Ananas comosus Aco018356.1.path1 R-ACO-1127357 Aco018356.1.path1 [cytosol] R-ACO-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119283 Lysine biosynthesis II none Ananas comosus Aco018378.1.path1 R-ACO-1124095 Aco018378.1.path1 [cytosol] R-ACO-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119452 Galactose degradation II none Ananas comosus Aco018422.1.path1 R-ACO-1128632 Aco018422.1.path1 [cytosol] R-ACO-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119465 Sucrose biosynthesis none Ananas comosus Aco018422.1.path1 R-ACO-1128632 Aco018422.1.path1 [cytosol] R-ACO-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119477 Starch biosynthesis none Ananas comosus Aco018423.1.path1 R-ACO-1125564-3 Aco018423.1.path1 [cytosol] R-ACO-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119291 Nitrate assimilation none Ananas comosus Aco018423.1.path1 R-ACO-1125564-3 Aco018423.1.path1 [cytosol] R-ACO-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119293 Glutamine biosynthesis I none Ananas comosus Aco018423.1.path1 R-ACO-1125564-3 Aco018423.1.path1 [cytosol] R-ACO-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119443 Ammonia assimilation cycle none Ananas comosus Aco018440.1.path1 R-ACO-1127031 Aco018440.1.path1 [cytosol] R-ACO-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119460 Isoleucine biosynthesis from threonine none Ananas comosus Aco018450.1.path1 R-ACO-1128337-2 Aco018450.1.path1 [plastid stroma] R-ACO-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119308 Momilactone biosynthesis none Ananas comosus Aco018450.1.path1 R-ACO-1128244-2 Aco018450.1.path1 [chloroplast] R-ACO-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119348 Ent-kaurene biosynthesis none Ananas comosus Aco018500.1.path1 R-ACO-8987535-2 Aco018500.1.path1 [chloroplast] R-ACO-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119312 Photorespiration none Ananas comosus Aco018505.1.path1 R-ACO-9030976 Aco018505.1.path1 [nucleoplasm] R-ACO-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5654828 Strigolactone signaling none Ananas comosus Aco018505.1.path1 R-ACO-9030976 Aco018505.1.path1 [nucleoplasm] R-ACO-9030908 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9030908 Underwater shoot and internode elongation none Ananas comosus Aco018505.1.path1 R-ACO-9030976 Aco018505.1.path1 [nucleoplasm] R-ACO-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9035605 Regulation of seed size none Ananas comosus Aco018505.1.path1 R-ACO-9035631 Aco018505.1.path1 [cytosol] R-ACO-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9035605 Regulation of seed size none Ananas comosus Aco018505.1.path1 R-ACO-9030976 Aco018505.1.path1 [nucleoplasm] R-ACO-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9608575 Reproductive meristem phase change none Ananas comosus Aco018505.1.path1 R-ACO-9035631 Aco018505.1.path1 [cytosol] R-ACO-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9608575 Reproductive meristem phase change none Ananas comosus Aco018505.1.path1 R-ACO-9608743 Aco018505.1.path1 [cytosol] R-ACO-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9608575 Reproductive meristem phase change none Ananas comosus Aco018505.1.path1 R-ACO-9608705 Aco018505.1.path1 [nucleoplasm] R-ACO-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9608575 Reproductive meristem phase change none Ananas comosus Aco018529.1.path1 R-ACO-1124496 Aco018529.1.path1 [cytosol] R-ACO-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119615 Mevalonate pathway none Ananas comosus Aco018578.1.path1 R-ACO-2685730 Aco018578.1.path1 [cytosol] R-ACO-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119580 IAA biosynthesis II none Ananas comosus Aco018596.1.path1 R-ACO-1122785-2 Aco018596.1.path1 [cytosol] R-ACO-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119273 Lysine biosynthesis I none Ananas comosus Aco018596.1.path1 R-ACO-1126726-2 Aco018596.1.path1 [cytosol] R-ACO-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119273 Lysine biosynthesis I none Ananas comosus Aco018596.1.path1 R-ACO-1122785-2 Aco018596.1.path1 [cytosol] R-ACO-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119283 Lysine biosynthesis II none Ananas comosus Aco018596.1.path1 R-ACO-1126726-2 Aco018596.1.path1 [cytosol] R-ACO-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119283 Lysine biosynthesis II none Ananas comosus Aco018596.1.path1 R-ACO-1122785-2 Aco018596.1.path1 [cytosol] R-ACO-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119570 Cytosolic glycolysis none Ananas comosus Aco018682.1.path1 R-ACO-1126444 Aco018682.1.path1 [cytosol] R-ACO-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119610 Biotin biosynthesis II none Ananas comosus Aco018714.1.path1 R-ACO-5632121 Aco018714.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco018770.1.path1 R-ACO-1129924 Aco018770.1.path1 [cytosol] R-ACO-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119342 Gamma-glutamyl cycle none Ananas comosus Aco018770.1.path1 R-ACO-1129924 Aco018770.1.path1 [cytosol] R-ACO-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119483 Glutathione biosynthesis none Ananas comosus Aco018800.1.path1 R-ACO-9658729 Aco018800.1.path1 [cytosol] R-ACO-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119389 Phenylalanine biosynthesis I none Ananas comosus Aco018800.1.path1 R-ACO-9658729 Aco018800.1.path1 [cytosol] R-ACO-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119506 tyrosine degradation I none Ananas comosus Aco018810.1.path1 R-ACO-5632341 Aco018810.1.path1 [cytosol] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco018810.1.path1 R-ACO-5632221 phospho-Aco018810.1.path1 [cytosol] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco018810.1.path1 R-ACO-5632170 phospho-Aco018810.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco018832.1.path1 R-ACO-1126892 Aco018832.1.path1 [cytosol] R-ACO-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119353 Linear furanocoumarin biosynthesis none Ananas comosus Aco018845.1.path1 R-ACO-5632319 phospho-Aco018845.1.path1 [plasma membrane] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco018875.1.path1 R-ACO-6787119 Aco018875.1.path1 [nucleoplasm] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco018922.1.path1 R-ACO-5632157 Aco018922.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco018922.1.path1 R-ACO-5632157 Aco018922.1.path1 [nucleoplasm] R-ACO-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5654828 Strigolactone signaling none Ananas comosus Aco018974.1.path1 R-ACO-1123161-2 Aco018974.1.path1 [chloroplast] R-ACO-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119494 Tryptophan biosynthesis none Ananas comosus Aco018978.1.path1 R-ACO-5608125 Aco018978.1.path1 [nucleoplasm] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco018996.1.path1 R-ACO-1124813 Aco018996.1.path1 [mitochondrial matrix] R-ACO-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119337 Proline degradation none Ananas comosus Aco018996.1.path1 R-ACO-8986570 Aco018996.1.path1 [mitochondrial matrix] R-ACO-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119365 Lysine degradation II none Ananas comosus Aco018996.1.path1 R-ACO-9658682 Aco018996.1.path1 [cytosol] R-ACO-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119567 Beta-alanine biosynthesis I none Ananas comosus Aco019036.1.path1 R-ACO-1130231 Aco019036.1.path1 [endoplasmic reticulum membrane] R-ACO-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119325 Sphingolipid metabolism none Ananas comosus Aco019050.1.path1 R-ACO-1128606 Aco019050.1.path1 [mitochondrial matrix] R-ACO-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119365 Lysine degradation II none Ananas comosus Aco019050.1.path1 R-ACO-1173244 Aco019050.1.path1 [mitochondrial matrix] R-ACO-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119533 TCA cycle (plant) none Ananas comosus Aco019068.1.path1 R-ACO-1124560 Aco019068.1.path1 [cytosol] R-ACO-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119563 UDP-D-xylose biosynthesis none Ananas comosus Aco019068.1.path1 R-ACO-9681903 Aco019068.1.path1 [Golgi lumen] R-ACO-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119574 UDP-L-arabinose biosynthesis and transport none Ananas comosus Aco019068.1.path1 R-ACO-1124560 Aco019068.1.path1 [cytosol] R-ACO-5654894 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5654894 UDP-D-apiose biosynthesis none Ananas comosus Aco019203.1.path1 R-ACO-1123092 Aco019203.1.path1 [cytosol] R-ACO-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119278 PRPP biosynthesis I none Ananas comosus Aco019261.1.path1 R-ACO-9025819 Aco019261.1.path1 [plasma membrane] R-ACO-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9025727 Iron uptake and transport in root vascular system none Ananas comosus Aco019311.1.path1 R-ACO-8879061-2 LOS2 homolog [nucleoplasm] R-ACO-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8879007 Response to cold temperature none Ananas comosus Aco019394.1.path1 R-ACO-1129571 Aco019394.1.path1 [mitochondrion] R-ACO-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119365 Lysine degradation II none Ananas comosus Aco019412.1.path1 R-ACO-1129184 Aco019412.1.path1 [cytosol] R-ACO-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119273 Lysine biosynthesis I none Ananas comosus Aco019412.1.path1 R-ACO-1129184 Aco019412.1.path1 [cytosol] R-ACO-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119283 Lysine biosynthesis II none Ananas comosus Aco019412.1.path1 R-ACO-5606505 Aco019412.1.path1 [plastid stroma] R-ACO-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119419 Lysine biosynthesis VI none Ananas comosus Aco019537.1.path1 R-ACO-9675293-3 Aco019537.1.path1 [nucleoplasm] R-ACO-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9030557 Lateral root initiation none Ananas comosus Aco019540.1.path1 R-ACO-1114864 Aco019540.1.path1 [cytosol] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco019543.1.path1 R-ACO-9618156 Aco019543.1.path1 [plasma membrane] R-ACO-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9618218 Arsenic uptake and detoxification none Ananas comosus Aco019557.1.path1 R-ACO-1129184-2 Aco019557.1.path1 [cytosol] R-ACO-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119273 Lysine biosynthesis I none Ananas comosus Aco019557.1.path1 R-ACO-1129184-2 Aco019557.1.path1 [cytosol] R-ACO-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119283 Lysine biosynthesis II none Ananas comosus Aco019557.1.path1 R-ACO-5606505-2 Aco019557.1.path1 [plastid stroma] R-ACO-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119419 Lysine biosynthesis VI none Ananas comosus Aco019687.1.path1 R-ACO-1128200-2 Aco019687.1.path1 [cytosol] R-ACO-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119316 Phenylpropanoid biosynthesis none Ananas comosus Aco019822.1.path1 R-ACO-1125587 Aco019822.1.path1 [cytosol] R-ACO-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119379 Flavin biosynthesis none Ananas comosus Aco019860.1.path1 R-ACO-1128734 Aco019860.1.path1 [cytosol] R-ACO-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119332 Jasmonic acid biosynthesis none Ananas comosus Aco019888.1.path1 R-ACO-9611465-2 Aco019888.1.path1 [nucleoplasm] R-ACO-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9611432 Recognition of fungal and bacterial pathogens and immunity response none Ananas comosus Aco019888.1.path1 R-ACO-9611445-2 Aco019888.1.path1 [nucleoplasm] R-ACO-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9611432 Recognition of fungal and bacterial pathogens and immunity response none Ananas comosus Aco019895.1.path1 R-ACO-5603891 Aco019895.1.path1 [plastid stroma] R-ACO-1119420 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119420 Glutamate biosynthesis V none Ananas comosus Aco019895.1.path1 R-ACO-1125410 Aco019895.1.path1 [chloroplast stroma] R-ACO-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119443 Ammonia assimilation cycle none Ananas comosus Aco019942.1.path1 R-ACO-9031169 Aco019942.1.path1 [endoplasmic reticulum lumen] R-ACO-9031225 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9031225 Response to phosphate deficiency none Ananas comosus Aco019942.1.path1 R-ACO-9031255 Aco019942.1.path1 [plasma membrane] R-ACO-9031225 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9031225 Response to phosphate deficiency none Ananas comosus Aco019942.1.path1 R-ACO-9031255 Aco019942.1.path1 [plasma membrane] R-ACO-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9618218 Arsenic uptake and detoxification none Ananas comosus Aco019970.1.path1 R-ACO-9640698-2 Aco019970.1.path1 [nucleoplasm] R-ACO-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640887 G1/S transition none Ananas comosus Aco019985.1.path1 R-ACO-9618085 Aco019985.1.path1 [cytosol] R-ACO-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9618218 Arsenic uptake and detoxification none Ananas comosus Aco020093.1.path1 R-ACO-1129547 Aco020093.1.path1 [cytosol] R-ACO-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119389 Phenylalanine biosynthesis I none Ananas comosus Aco020093.1.path1 R-ACO-1129547 Aco020093.1.path1 [cytosol] R-ACO-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119400 Methionine biosynthesis II none Ananas comosus Aco020093.1.path1 R-ACO-1129547 Aco020093.1.path1 [cytosol] R-ACO-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119506 tyrosine degradation I none Ananas comosus Aco020108.1.path1 R-ACO-9675365 Aco020108.1.path1 [nucleoplasm] R-ACO-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675508 Root elongation none Ananas comosus Aco020278.1.path1 R-ACO-1127625 Aco020278.1.path1 [cytosol] R-ACO-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119265 Tetrahydrofolate biosynthesis I none Ananas comosus Aco020278.1.path1 R-ACO-1127625 Aco020278.1.path1 [cytosol] R-ACO-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119523 Tetrahydrofolate biosynthesis II none Ananas comosus Aco020331.1.path1 R-ACO-1127753 Aco020331.1.path1 [cytosol] R-ACO-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119278 PRPP biosynthesis I none Ananas comosus Aco020404.1.path1 R-ACO-1128707 Aco020404.1.path1 [cytosol] R-ACO-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Ananas comosus Aco020404.1.path1 R-ACO-1128707 Aco020404.1.path1 [cytosol] R-ACO-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119370 Sterol biosynthesis none Ananas comosus Aco020404.1.path1 R-ACO-1128707 Aco020404.1.path1 [cytosol] R-ACO-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119439 Cholesterol biosynthesis III (via desmosterol) none Ananas comosus Aco020404.1.path1 R-ACO-1128707 Aco020404.1.path1 [cytosol] R-ACO-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119559 Cholesterol biosynthesis I none Ananas comosus Aco020410.1.path1 R-ACO-1125237-2 Aco020410.1.path1 [mitochondrial matrix] R-ACO-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119533 TCA cycle (plant) none Ananas comosus Aco020454.1.path1 R-ACO-9639810 Aco020454.1.path1 [cell wall] R-ACO-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9639861 Development of root hair none Ananas comosus Aco020561.1.path1 R-ACO-4788601 Aco020561.1.path1 [plastid stroma] R-ACO-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119509 Histidine biosynthesis I none Ananas comosus Aco020571.1.path1 R-ACO-1125417-2 Aco020571.1.path1 [cytosol] R-ACO-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119265 Tetrahydrofolate biosynthesis I none Ananas comosus Aco020571.1.path1 R-ACO-1125417-2 Aco020571.1.path1 [cytosol] R-ACO-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119523 Tetrahydrofolate biosynthesis II none Ananas comosus Aco020658.1.path1 R-ACO-1122936 Aco020658.1.path1 [cytosol] R-ACO-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119452 Galactose degradation II none Ananas comosus Aco020734.1.path1 R-ACO-9640675 Aco020734.1.path1 [nucleoplasm] R-ACO-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640882 Assembly of pre-replication complex none Ananas comosus Aco020734.1.path1 R-ACO-9640675 Aco020734.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco020738.1.path1 R-ACO-1130036 Aco020738.1.path1 [endoplasmic reticulum membrane] R-ACO-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119402 Phospholipid biosynthesis I none Ananas comosus Aco020754.1.path1 R-ACO-9658681 Aco020754.1.path1 [plasma membrane] R-ACO-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119567 Beta-alanine biosynthesis I none Ananas comosus Aco020811.1.path1 R-ACO-9025372 Aco020811.1.path1 [endoplasmic reticulum membrane] R-ACO-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119402 Phospholipid biosynthesis I none Ananas comosus Aco020812.1.path1 R-ACO-9640785 Aco020812.1.path1 [nucleoplasm] R-ACO-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640882 Assembly of pre-replication complex none Ananas comosus Aco020812.1.path1 R-ACO-9640785 Aco020812.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco020847.1.path1 R-ACO-9638999-2 Aco020847.1.path1 [cytosol] R-ACO-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119434 Phytic acid biosynthesis (lipid-independent) none Ananas comosus Aco020872.1.path1 R-ACO-1123561 Aco020872.1.path1 [cytosol] R-ACO-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119624 Methionine salvage pathway none Ananas comosus Aco020891.1.path1 R-ACO-9639088 Aco020891.1.path1 [plasma membrane] R-ACO-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9639136 Response to Aluminum stress none Ananas comosus Aco020895.1.path1 R-ACO-9609343 Aco020895.1.path1 [cytosol] R-ACO-9609352 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9609352 Lycopene catabolism none Ananas comosus Aco020925.1.path1 R-ACO-8854102 Aco020925.1.path1 [cytosol] R-ACO-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119556 Choline biosynthesis I none Ananas comosus Aco020962.1.path1 R-ACO-8878987 Aco020962.1.path1 [nucleoplasm] R-ACO-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8879007 Response to cold temperature none Ananas comosus Aco021017.1.path1 R-ACO-1130101 Aco021017.1.path1 [amyloplast] R-ACO-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119477 Starch biosynthesis none Ananas comosus Aco021119.1.path1 R-ACO-1129809 Aco021119.1.path1 [mitochondrial inner membrane] R-ACO-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119410 Ascorbate biosynthesis none Ananas comosus Aco021133.1.path1 R-ACO-9640761 Aco021133.1.path1 [nucleoplasm] R-ACO-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640882 Assembly of pre-replication complex none Ananas comosus Aco021133.1.path1 R-ACO-9640761 Aco021133.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco021133.1.path1 R-ACO-9640761 Aco021133.1.path1 [nucleoplasm] R-ACO-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675824 DNA replication Initiation none Ananas comosus Aco021178.1.path1 R-ACO-8933833 Aco021178.1.path1 [nucleoplasm] R-ACO-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8933811 Circadian rhythm none Ananas comosus Aco021178.1.path1 R-ACO-8933833 Aco021178.1.path1 [nucleoplasm] R-ACO-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9928995 Drought escape (DE) via ABA-dependent pathway none Ananas comosus Aco021184.1.path1 R-ACO-1126998 Aco021184.1.path1 [cytosol] R-ACO-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119615 Mevalonate pathway none Ananas comosus Aco021185.1.path1 R-ACO-1124959-2 Aco021185.1.path1 [cytosol] R-ACO-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119623 Acyl-CoA synthetase pathway none Ananas comosus Aco021191.1.path1 R-ACO-1127491 Aco021191.1.path1 [chloroplast] R-ACO-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119312 Photorespiration none Ananas comosus Aco021236.1.path1 R-ACO-9916160 Aco021236.1.path1 [nucleoplasm] R-ACO-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9916190 Root angle formation: elongation and curvature response none Ananas comosus Aco021288.1.path1 R-ACO-1124145 Aco021288.1.path1 [mitochondrial matrix] R-ACO-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119445 Beta-alanine biosynthesis II none Ananas comosus Aco021314.1.path1 R-ACO-6787224 Aco021314.1.path1 [nucleoplasm] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco021314.1.path1 R-ACO-6787146 Aco021314.1.path1 [cytosol] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco021340.1.path1 R-ACO-1128534 Aco021340.1.path1 [cytosol] R-ACO-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119437 Glutathione redox reactions I none Ananas comosus Aco021370.1.path1 R-ACO-1129926 Aco021370.1.path1 [cytosol] R-ACO-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Ananas comosus Aco021382.1.path1 R-ACO-5608184 Aco021382.1.path1 [nucleoplasm] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco021635.1.path1 R-ACO-9639874 Aco021635.1.path1 [plasma membrane] R-ACO-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9639861 Development of root hair none Ananas comosus Aco021718.1.path1 R-ACO-1122347 Aco021718.1.path1 [cytosol] R-ACO-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119384 NAD biosynthesis I (from aspartate) none Ananas comosus Aco021733.1.path1 R-ACO-8853988 Phosphatidylglycerophosphatase [mitochondrial matrix] R-ACO-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119260 Cardiolipin biosynthesis none Ananas comosus Aco021760.1.path1 R-ACO-1128214 Aco021760.1.path1 [nucleoplasm] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco021826.1.path1 R-ACO-5149676 Aco021826.1.path1 [plastid stroma] R-ACO-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119519 Calvin cycle none Ananas comosus Aco021829.1.path1 R-ACO-9025363 Aco021829.1.path1 [endoplasmic reticulum membrane] R-ACO-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119402 Phospholipid biosynthesis I none Ananas comosus Aco021854.1.path1 R-ACO-2885386 Aco021854.1.path1 [cytosol] R-ACO-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119417 Stachyose biosynthesis none Ananas comosus Aco021883.1.path1 R-ACO-8987535 Aco021883.1.path1 [chloroplast] R-ACO-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119312 Photorespiration none Ananas comosus Aco021905.1.path1 R-ACO-9681911-2 Aco021905.1.path1 [Golgi membrane] R-ACO-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119574 UDP-L-arabinose biosynthesis and transport none Ananas comosus Aco021932.1.path1 R-ACO-1126604 Aco021932.1.path1 [cytosol] R-ACO-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119438 Secologanin and strictosidine biosynthesis none Ananas comosus Aco021983.1.path1 R-ACO-9916108-2 Aco021983.1.path1 [extracellular region] R-ACO-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119403 Removal of superoxide radicals none Ananas comosus Aco021983.1.path1 R-ACO-9916108-2 Aco021983.1.path1 [extracellular region] R-ACO-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9607185 Generation of superoxide radicals none Ananas comosus Aco021991.1.path1 R-ACO-1128366-2 Aco021991.1.path1 [cytosol] R-ACO-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119334 Ethylene biosynthesis from methionine none Ananas comosus Aco021991.1.path1 R-ACO-1128366-2 Aco021991.1.path1 [cytosol] R-ACO-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119501 S-adenosyl-L-methionine cycle none Ananas comosus Aco021991.1.path1 R-ACO-1128366-2 Aco021991.1.path1 [cytosol] R-ACO-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119624 Methionine salvage pathway none Ananas comosus Aco021991.1.path1 R-ACO-9025738-2 Aco021991.1.path1 [cytosol] R-ACO-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9025754 Mugineic acid biosynthesis none Ananas comosus Aco022092.1.path1 R-ACO-9826674 Aco022092.1.path1 [nucleoplasm] R-ACO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Ananas comosus Aco022108.1.path1 R-ACO-9612399 Aco022108.1.path1 [peroxisomal matrix] R-ACO-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119612 Cysteine degradation none Ananas comosus Aco022108.1.path1 R-ACO-9612380 Aco022108.1.path1 [cytosol] R-ACO-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119612 Cysteine degradation none Ananas comosus Aco022207.1.path1 R-ACO-1129029-2 Aco022207.1.path1 [cytosol] R-ACO-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119501 S-adenosyl-L-methionine cycle none Ananas comosus Aco022282.1.path1 R-ACO-1130006 Aco022282.1.path1 [plastid stroma] R-ACO-1119569 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119569 Kievitone biosynthesis none Ananas comosus Aco022320.1.path1 R-ACO-9927723 Aco022320.1.path1 [nucleoplasm] R-ACO-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8934036 Long day regulated expression of florigens none Ananas comosus Aco022423.1.path1 R-ACO-1129559 Aco022423.1.path1 [plastid stroma] R-ACO-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119308 Momilactone biosynthesis none Ananas comosus Aco022426.1.path1 R-ACO-1129559-2 Aco022426.1.path1 [plastid stroma] R-ACO-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119308 Momilactone biosynthesis none Ananas comosus Aco022451.1.path1 R-ACO-5632316 Aco022451.1.path1 [cytosol] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco022495.1.path1 R-ACO-1130162 Aco022495.1.path1 [chloroplast] R-ACO-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119494 Tryptophan biosynthesis none Ananas comosus Aco022504.1.path1 R-ACO-5632261-2 Aco022504.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco022517.1.path1 R-ACO-8879085 Aco022517.1.path1 [nucleoplasm] R-ACO-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8879007 Response to cold temperature none Ananas comosus Aco022637.1.path1 R-ACO-1126373 Aco022637.1.path1 [cytosol] R-ACO-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Ananas comosus Aco022675.1.path1 R-ACO-9920292 Aco022675.1.path1 [nucleoplasm] R-ACO-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8934108 Short day regulated expression of florigens none Ananas comosus Aco022738.1.path1 R-ACO-1130247 Aco022738.1.path1 [plastid stroma] R-ACO-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119519 Calvin cycle none Ananas comosus Aco022863.1.path1 R-ACO-9675500 Aco022863.1.path1 [endoplasmic reticulum membrane] R-ACO-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9030654 Primary root development none Ananas comosus Aco022874.1.path1 R-ACO-1124905 Aco022874.1.path1 [plastid stroma] R-ACO-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119519 Calvin cycle none Ananas comosus Aco022877.1.path1 R-ACO-1126714 Aco022877.1.path1 [cytosol] R-ACO-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119273 Lysine biosynthesis I none Ananas comosus Aco022877.1.path1 R-ACO-1126714 Aco022877.1.path1 [cytosol] R-ACO-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119283 Lysine biosynthesis II none Ananas comosus Aco022877.1.path1 R-ACO-1126714 Aco022877.1.path1 [cytosol] R-ACO-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119295 Homoserine biosynthesis none Ananas comosus Aco022877.1.path1 R-ACO-5606484 Aco022877.1.path1 [plastid stroma] R-ACO-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119419 Lysine biosynthesis VI none Ananas comosus Aco023000.1.path1 R-ACO-8987460 Aco023000.1.path1 [chloroplast] R-ACO-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119312 Photorespiration none Ananas comosus Aco023067.1.path1 R-ACO-1128902-2 Aco023067.1.path1 [cytosol] R-ACO-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119271 Threonine degradation none Ananas comosus Aco023067.1.path1 R-ACO-1128902-2 Aco023067.1.path1 [cytosol] R-ACO-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119486 IAA biosynthesis I none Ananas comosus Aco023067.1.path1 R-ACO-9658645-2 Aco023067.1.path1 [cytosol] R-ACO-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119567 Beta-alanine biosynthesis I none Ananas comosus Aco023072.1.path1 R-ACO-1128902-3 Aco023072.1.path1 [cytosol] R-ACO-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119271 Threonine degradation none Ananas comosus Aco023072.1.path1 R-ACO-9658656 Aco023072.1.path1 [cytosol] R-ACO-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119271 Threonine degradation none Ananas comosus Aco023072.1.path1 R-ACO-1128902-3 Aco023072.1.path1 [cytosol] R-ACO-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119486 IAA biosynthesis I none Ananas comosus Aco023072.1.path1 R-ACO-9658656 Aco023072.1.path1 [cytosol] R-ACO-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119486 IAA biosynthesis I none Ananas comosus Aco023072.1.path1 R-ACO-9658656 Aco023072.1.path1 [cytosol] R-ACO-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119567 Beta-alanine biosynthesis I none Ananas comosus Aco023228.1.path1 R-ACO-1125910-2 Aco023228.1.path1 [plastid stroma] R-ACO-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119367 Polyisoprenoid biosynthesis none Ananas comosus Aco023254.1.path1 R-ACO-9640786 Aco023254.1.path1 [nucleoplasm] R-ACO-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640882 Assembly of pre-replication complex none Ananas comosus Aco023254.1.path1 R-ACO-9640786 Aco023254.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco023254.1.path1 R-ACO-9640786 Aco023254.1.path1 [nucleoplasm] R-ACO-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675824 DNA replication Initiation none Ananas comosus Aco023269.1.path1 R-ACO-1130153 Aco023269.1.path1 [cytosol] R-ACO-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119332 Jasmonic acid biosynthesis none Ananas comosus Aco023269.1.path1 R-ACO-6787115 Aco023269.1.path1 [nucleoplasm] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco023359.1.path1 R-ACO-9916298 OsEXPA3 [extracellular region] R-ACO-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9916190 Root angle formation: elongation and curvature response none Ananas comosus Aco023409.1.path1 R-ACO-1130394 Aco023409.1.path1 [cytosol] R-ACO-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119452 Galactose degradation II none Ananas comosus Aco023494.1.path1 R-ACO-9626474 Aco023494.1.path1 [trans-Golgi network membrane] R-ACO-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9626305 Regulatory network of nutrient accumulation none Ananas comosus Aco023517.1.path1 R-ACO-1128366 Aco023517.1.path1 [cytosol] R-ACO-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119334 Ethylene biosynthesis from methionine none Ananas comosus Aco023517.1.path1 R-ACO-1128366 Aco023517.1.path1 [cytosol] R-ACO-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119501 S-adenosyl-L-methionine cycle none Ananas comosus Aco023517.1.path1 R-ACO-1128366 Aco023517.1.path1 [cytosol] R-ACO-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119624 Methionine salvage pathway none Ananas comosus Aco023517.1.path1 R-ACO-9025738 Aco023517.1.path1 [cytosol] R-ACO-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9025754 Mugineic acid biosynthesis none Ananas comosus Aco023523.1.path1 R-ACO-9916108 Aco023523.1.path1 [extracellular region] R-ACO-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119403 Removal of superoxide radicals none Ananas comosus Aco023523.1.path1 R-ACO-9916108 Aco023523.1.path1 [extracellular region] R-ACO-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9607185 Generation of superoxide radicals none Ananas comosus Aco023538.1.path1 R-ACO-1125038 Aco023538.1.path1 [plastid stroma] R-ACO-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119449 Carotenoid biosynthesis none Ananas comosus Aco023635.1.path1 R-ACO-1127922 Aco023635.1.path1 [cytosol] R-ACO-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119370 Sterol biosynthesis none Ananas comosus Aco023952.1.path1 R-ACO-1125839 Aco023952.1.path1 [cytosol] R-ACO-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119386 UDP-N-acetylgalactosamine biosynthesis none Ananas comosus Aco023960.1.path1 R-ACO-1130247-2 Aco023960.1.path1 [plastid stroma] R-ACO-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119519 Calvin cycle none Ananas comosus Aco023992.1.path1 R-ACO-9918210-3 granule-bound starch synthase 1 (GBSSI, or Waxy) [amyloplast] R-ACO-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119477 Starch biosynthesis none Ananas comosus Aco023992.1.path1 R-ACO-9626344-3 Aco023992.1.path1 [plastid stroma] R-ACO-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9626305 Regulatory network of nutrient accumulation none Ananas comosus Aco024200.1.path1 R-ACO-9025739 Aco024200.1.path1 [plasma membrane] R-ACO-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9025727 Iron uptake and transport in root vascular system none Ananas comosus Aco024200.1.path1 R-ACO-9025739 Aco024200.1.path1 [plasma membrane] R-ACO-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9618218 Arsenic uptake and detoxification none Ananas comosus Aco024200.1.path1 R-ACO-9025739 Aco024200.1.path1 [plasma membrane] R-ACO-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9639136 Response to Aluminum stress none Ananas comosus Aco024201.1.path1 R-ACO-5149646 Aco024201.1.path1 [plastid stroma] R-ACO-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119519 Calvin cycle none Ananas comosus Aco024201.1.path1 R-ACO-1126652 Aco024201.1.path1 [cytosol] R-ACO-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119570 Cytosolic glycolysis none Ananas comosus Aco024224.1.path1 R-ACO-1130141 Aco024224.1.path1 [mitochondrial matrix] R-ACO-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119533 TCA cycle (plant) none Ananas comosus Aco024224.1.path1 R-ACO-1130141 Aco024224.1.path1 [mitochondrial matrix] R-ACO-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119540 Leucine biosynthesis none Ananas comosus Aco024230.1.path1 R-ACO-1123087 Aco024230.1.path1 [plasma membrane] R-ACO-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119314 Cellulose biosynthesis none Ananas comosus Aco024246.1.path1 R-ACO-4827046 Aco024246.1.path1 [plastid stroma] R-ACO-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-4827054 Tetrapyrrole biosynthesis I none Ananas comosus Aco024262.1.path1 R-ACO-1126593 Aco024262.1.path1 [endosome] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco024262.1.path1 R-ACO-5679293 Aco024262.1.path1 [plasma membrane] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco024262.1.path1 R-ACO-8858098 Aco024262.1.path1 [plasma membrane] R-ACO-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8858053 Polar auxin transport none Ananas comosus Aco024370.1.path1 R-ACO-1124377 Aco024370.1.path1 [cytosol] R-ACO-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119452 Galactose degradation II none Ananas comosus Aco024370.1.path1 R-ACO-1124377 Aco024370.1.path1 [cytosol] R-ACO-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119465 Sucrose biosynthesis none Ananas comosus Aco024410.1.path1 R-ACO-4827046-3 Aco024410.1.path1 [plastid stroma] R-ACO-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-4827054 Tetrapyrrole biosynthesis I none Ananas comosus Aco024440.1.path1 R-ACO-9618171-3 Aco024440.1.path1 [plasma membrane] R-ACO-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9618218 Arsenic uptake and detoxification none Ananas comosus Aco024451.1.path1 R-ACO-9607132 RBOHB [plasma membrane] R-ACO-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9611432 Recognition of fungal and bacterial pathogens and immunity response none Ananas comosus Aco024451.1.path1 R-ACO-9611529 phospho-phosphorylated-RBOHB [plasma membrane] R-ACO-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9611432 Recognition of fungal and bacterial pathogens and immunity response none Ananas comosus Aco024490.1.path1 R-ACO-8933730-2 Aco024490.1.path1 [nucleoplasm] R-ACO-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8933811 Circadian rhythm none Ananas comosus Aco024553.1.path1 R-ACO-1129169-3 Aco024553.1.path1 [plastid stroma] R-ACO-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119308 Momilactone biosynthesis none Ananas comosus Aco024579.1.path1 R-ACO-9626449 Aco024579.1.path1 [cytosol] R-ACO-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9626305 Regulatory network of nutrient accumulation none Ananas comosus Aco024665.1.path1 R-ACO-1122832 Aco024665.1.path1 [plastid stroma] R-ACO-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119449 Carotenoid biosynthesis none Ananas comosus Aco024698.1.path1 R-ACO-8868904-2 Aco024698.1.path1 [endoplasmic reticulum membrane] R-ACO-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8868949 Intracellular auxin transport none Ananas comosus Aco024729.1.path1 R-ACO-5608164 Aco024729.1.path1 [nucleoplasm] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco024729.1.path1 R-ACO-5608164 Aco024729.1.path1 [nucleoplasm] R-ACO-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9030557 Lateral root initiation none Ananas comosus Aco024729.1.path1 R-ACO-5608164 Aco024729.1.path1 [nucleoplasm] R-ACO-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9608575 Reproductive meristem phase change none Ananas comosus Aco024729.1.path1 R-ACO-9658967 Aco024729.1.path1 [cytosol] R-ACO-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9608575 Reproductive meristem phase change none Ananas comosus Aco024797.1.path1 R-ACO-1129169 Aco024797.1.path1 [plastid stroma] R-ACO-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119308 Momilactone biosynthesis none Ananas comosus Aco025070.1.path1 R-ACO-1127398 Aco025070.1.path1 [plasma membrane] R-ACO-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119314 Cellulose biosynthesis none Ananas comosus Aco025070.1.path1 R-ACO-1127398 Aco025070.1.path1 [plasma membrane] R-ACO-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9639861 Development of root hair none Ananas comosus Aco025081.1.path1 R-ACO-5679455 Aco025081.1.path1 [nucleoplasm] R-ACO-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5679411 Gibberellin signaling none Ananas comosus Aco025081.1.path1 R-ACO-6787020 Aco025081.1.path1 [cytosol] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco025325.1.path1 R-ACO-1127599 Aco025325.1.path1 [cytosol] R-ACO-1119388 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119388 IAA biosynthesis VI (via indole-3-acetamide) none Ananas comosus Aco025365.1.path1 R-ACO-1124190 Aco025365.1.path1 [plastid stroma] R-ACO-1119412 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119412 Chlorophyll a biosynthesis I none Ananas comosus Aco025397.1.path1 R-ACO-8854445 Aco025397.1.path1 [cytosol] R-ACO-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119276 Choline biosynthesis III none Ananas comosus Aco025401.1.path1 R-ACO-5608137 Aco025401.1.path1 [nucleoplasm] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco025405.1.path1 R-ACO-1129282 Aco025405.1.path1 [cytosol] R-ACO-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119428 GDP-D-rhamnose biosynthesis none Ananas comosus Aco025405.1.path1 R-ACO-1129282 Aco025405.1.path1 [cytosol] R-ACO-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Ananas comosus Aco025425.1.path1 R-ACO-9675293-2 Aco025425.1.path1 [nucleoplasm] R-ACO-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9030557 Lateral root initiation none Ananas comosus Aco025557.1.path1 R-ACO-1123077 Aco025557.1.path1 [cytosol] R-ACO-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119458 Glutamate degradation none Ananas comosus Aco025579.1.path1 R-ACO-5654750 Aco025579.1.path1 [cytosol] R-ACO-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119393 Asparagine degradation I none Ananas comosus Aco025753.1.path1 R-ACO-5149646-2 Aco025753.1.path1 [plastid stroma] R-ACO-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119519 Calvin cycle none Ananas comosus Aco025753.1.path1 R-ACO-1126652-2 Aco025753.1.path1 [cytosol] R-ACO-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119570 Cytosolic glycolysis none Ananas comosus Aco025854.1.path1 R-ACO-1123832 Aco025854.1.path1 [cytosol] R-ACO-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119304 Putrescine biosynthesis II none Ananas comosus Aco025854.1.path1 R-ACO-1123832 Aco025854.1.path1 [cytosol] R-ACO-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119447 Putrescine biosynthesis I none Ananas comosus Aco025886.1.path1 R-ACO-1126400 Aco025886.1.path1 [chloroplast] R-ACO-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119494 Tryptophan biosynthesis none Ananas comosus Aco026079.1.path1 R-ACO-9645866 Aco026079.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco026079.1.path1 R-ACO-9645866 Aco026079.1.path1 [nucleoplasm] R-ACO-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675824 DNA replication Initiation none Ananas comosus Aco026085.1.path1 R-ACO-6787113-2 Aco026085.1.path1 [nucleoplasm] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco026090.1.path1 R-ACO-5632120-2 Aco026090.1.path1 [nucleoplasm] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco026355.1.path1 R-ACO-9918210-2 granule-bound starch synthase 1 (GBSSI, or Waxy) [amyloplast] R-ACO-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119477 Starch biosynthesis none Ananas comosus Aco026355.1.path1 R-ACO-9626344-2 Aco026355.1.path1 [plastid stroma] R-ACO-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9626305 Regulatory network of nutrient accumulation none Ananas comosus Aco026430.1.path1 R-ACO-6788234 Aco026430.1.path1 [cytosol] R-ACO-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6788019 Salicylic acid signaling none Ananas comosus Aco026430.1.path1 R-ACO-1124041 Aco026430.1.path1 [nucleoplasm] R-ACO-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6788019 Salicylic acid signaling none Ananas comosus Aco026531.1.path1 R-ACO-1123042 Aco026531.1.path1 R-ACO-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119400 Methionine biosynthesis II none Ananas comosus Aco026568.1.path1 R-ACO-9025351 Aco026568.1.path1 [cytosol] R-ACO-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119402 Phospholipid biosynthesis I none Ananas comosus Aco026571.1.path1 R-ACO-3321260-2 Aco026571.1.path1 [chloroplast stroma] R-ACO-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119287 Vitamin E biosynthesis none Ananas comosus Aco026631.1.path1 R-ACO-6787173 Aco026631.1.path1 [nucleoplasm] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco026631.1.path1 R-ACO-6786972 Aco026631.1.path1 [cytosol] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco026797.1.path1 R-ACO-1126892-2 Aco026797.1.path1 [cytosol] R-ACO-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119353 Linear furanocoumarin biosynthesis none Ananas comosus Aco027574.1.path1 R-ACO-9675866-2 Aco027574.1.path1 [nucleoplasm] R-ACO-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675782 Maturation none Ananas comosus Aco027574.1.path1 R-ACO-9675866-2 Aco027574.1.path1 [nucleoplasm] R-ACO-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675815 Leading strand synthesis none Ananas comosus Aco027574.1.path1 R-ACO-9675866-2 Aco027574.1.path1 [nucleoplasm] R-ACO-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675885 Lagging strand synthesis none Ananas comosus Aco027597.1.path1 R-ACO-1127916 Aco027597.1.path1 [plastid stroma] R-ACO-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119367 Polyisoprenoid biosynthesis none Ananas comosus Aco027597.1.path1 R-ACO-1127916 Aco027597.1.path1 [plastid stroma] R-ACO-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119615 Mevalonate pathway none Ananas comosus Aco027712.1.path1 R-ACO-1127597 Aco027712.1.path1 [cytosol] R-ACO-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119615 Mevalonate pathway none Ananas comosus Aco027752.1.path1 R-ACO-1130235-5 Aco027752.1.path1 [cytosol] R-ACO-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119261 Salicylate biosynthesis none Ananas comosus Aco027752.1.path1 R-ACO-1130235-5 Aco027752.1.path1 [cytosol] R-ACO-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119418 Suberin biosynthesis none Ananas comosus Aco027752.1.path1 R-ACO-1130235-5 Aco027752.1.path1 [cytosol] R-ACO-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119582 Phenylpropanoid biosynthesis, initial reactions none Ananas comosus Aco027840.1.path1 R-ACO-9918210 granule-bound starch synthase 1 (GBSSI, or Waxy) [amyloplast] R-ACO-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119477 Starch biosynthesis none Ananas comosus Aco027840.1.path1 R-ACO-9626344 Aco027840.1.path1 [plastid stroma] R-ACO-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9626305 Regulatory network of nutrient accumulation none Ananas comosus Aco027869.1.path1 R-ACO-5632114-4 Aco027869.1.path1 [cytosol] R-ACO-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5632095 Brassinosteroid signaling none Ananas comosus Aco027928.1.path1 R-ACO-8933766-2 Aco027928.1.path1 [nucleoplasm] R-ACO-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-8933811 Circadian rhythm none Ananas comosus Aco027950.1.path1 R-ACO-6786908-2 Aco027950.1.path1 [nucleoplasm] R-ACO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Ananas comosus Aco027950.1.path1 R-ACO-9826697-2 Aco027950.1.path1 [nucleoplasm] R-ACO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Ananas comosus Aco028186.1.path1 R-ACO-1126998-2 Aco028186.1.path1 [cytosol] R-ACO-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119615 Mevalonate pathway none Ananas comosus Aco028187.1.path1 R-ACO-1124959 Aco028187.1.path1 [cytosol] R-ACO-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119623 Acyl-CoA synthetase pathway none Ananas comosus Aco028298.1.path1 R-ACO-5138481-2 Aco028298.1.path1 [plastid stroma] R-ACO-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119263 Arginine biosynthesis none Ananas comosus Aco028298.1.path1 R-ACO-5138481-2 Aco028298.1.path1 [plastid stroma] R-ACO-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119539 Ornithine biosynthesis none Ananas comosus Aco028454.1.path1 R-ACO-9646016 Aco028454.1.path1 [nucleoplasm] R-ACO-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9645850 Activation of pre-replication complex none Ananas comosus Aco028454.1.path1 R-ACO-9646016 Aco028454.1.path1 [nucleoplasm] R-ACO-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9675885 Lagging strand synthesis none Ananas comosus Aco028575.1.path1 R-ACO-1124453 Aco028575.1.path1 [peroxisomal matrix] R-ACO-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119407 Ureide biosynthesis none Ananas comosus Aco028717.1.path1 R-ACO-3321260 Aco028717.1.path1 [chloroplast stroma] R-ACO-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119287 Vitamin E biosynthesis none Ananas comosus Aco028935.1.path1 R-ACO-9640698-3 Aco028935.1.path1 [nucleoplasm] R-ACO-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9640887 G1/S transition none Ananas comosus Aco029197.1.path1 R-ACO-5608102 Aco029197.1.path1 [nucleoplasm] R-ACO-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-5608118 Auxin signalling none Ananas comosus Aco029313.1.path1 R-ACO-1127254 Aco029313.1.path1 [cytosol] R-ACO-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119317 Spermine biosynthesis none Ananas comosus Aco029313.1.path1 R-ACO-1127254 Aco029313.1.path1 [cytosol] R-ACO-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119343 Spermidine biosynthesis none Ananas comosus Aco029372.1.path1 R-ACO-9826677 Aco029372.1.path1 [nucleoplasm] R-ACO-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Ananas comosus Aco029528.1.path1 R-ACO-1129629 Aco029528.1.path1 [plastid stroma] R-ACO-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119293 Glutamine biosynthesis I none Ananas comosus Aco029528.1.path1 R-ACO-1129629 Aco029528.1.path1 [plastid stroma] R-ACO-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119443 Ammonia assimilation cycle none Ananas comosus Aco029879.1.path1 R-ACO-9025447 Aco029879.1.path1 [cytosol] R-ACO-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119325 Sphingolipid metabolism none Ananas comosus Aco029883.1.path1 R-ACO-1129169-2 Aco029883.1.path1 [plastid stroma] R-ACO-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119308 Momilactone biosynthesis none Ananas comosus Aco030093.1.path1 R-ACO-1125237 Aco030093.1.path1 [mitochondrial matrix] R-ACO-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119533 TCA cycle (plant) none Ananas comosus Aco030260.1.path1 R-ACO-1128431-2 Aco030260.1.path1 [cytosol] R-ACO-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119316 Phenylpropanoid biosynthesis none Ananas comosus Aco030281.1.path1 R-ACO-9675293 Aco030281.1.path1 [nucleoplasm] R-ACO-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-9030557 Lateral root initiation none Ananas comosus Aco030435.1.path1 R-ACO-1125967 Aco030435.1.path1 [cytosol] R-ACO-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119316 Phenylpropanoid biosynthesis none Ananas comosus Aco030607.1.path1 R-ACO-1123609-2 Aco030607.1.path1 [plasma membrane] R-ACO-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119314 Cellulose biosynthesis none Ananas comosus Aco030760.1.path1 R-ACO-1128902 Aco030760.1.path1 [cytosol] R-ACO-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119271 Threonine degradation none Ananas comosus Aco030760.1.path1 R-ACO-1128902 Aco030760.1.path1 [cytosol] R-ACO-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119486 IAA biosynthesis I none Ananas comosus Aco030760.1.path1 R-ACO-9658645 Aco030760.1.path1 [cytosol] R-ACO-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119567 Beta-alanine biosynthesis I none Ananas comosus Aco031295.1.path1 R-ACO-6788072 Aco031295.1.path1 [nucleoplasm] R-ACO-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6788019 Salicylic acid signaling none Ananas comosus Aco031352.1.path1 R-ACO-5221144-2 Aco031352.1.path1 [plastid] R-ACO-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119374 Abscisic acid biosynthesis none Ananas comosus Aco031586.1.path1 R-ACO-6787009-2 Aco031586.1.path1 [nucleoplasm] R-ACO-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-6787011 Jasmonic acid signaling none Ananas comosus Aco031627.1.path1 R-ACO-9681911 Aco031627.1.path1 [Golgi membrane] R-ACO-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119574 UDP-L-arabinose biosynthesis and transport none Ananas comosus Aco031642.1.path1 R-ACO-9681911-3 Aco031642.1.path1 [Golgi membrane] R-ACO-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ACO-1119574 UDP-L-arabinose biosynthesis and transport none Ananas comosus AeUmb.TA1851.r1.1UG0000170 R-AUM-1123150-2 AeUmb.TA1851.r1.1UG0000170 [cytosol] R-AUM-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0000170 R-AUM-1123150-2 AeUmb.TA1851.r1.1UG0000170 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0000170 R-AUM-1123150-2 AeUmb.TA1851.r1.1UG0000170 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0000750 R-AUM-1128974 AeUmb.TA1851.r1.1UG0000750 [cytosol] R-AUM-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119287 Vitamin E biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0000750 R-AUM-1128974 AeUmb.TA1851.r1.1UG0000750 [cytosol] R-AUM-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119506 tyrosine degradation I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0001190 R-AUM-1124935-3 AeUmb.TA1851.r1.1UG0001190 [cytosol] R-AUM-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119349 S-methylmethionine cycle none Aegilops umbellulata AeUmb.TA1851.r1.1UG0001240 R-AUM-1122373-3 AeUmb.TA1851.r1.1UG0001240 [cytosol] R-AUM-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119304 Putrescine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.1UG0001240 R-AUM-1122373-3 AeUmb.TA1851.r1.1UG0001240 [cytosol] R-AUM-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119447 Putrescine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0001400 R-AUM-1123745 AeUmb.TA1851.r1.1UG0001400 [endoplasmic reticulum membrane] R-AUM-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119260 Cardiolipin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0001400 R-AUM-1123745 AeUmb.TA1851.r1.1UG0001400 [endoplasmic reticulum membrane] R-AUM-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119402 Phospholipid biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0002820 R-AUM-9611477 phospho-phosphorylated-RLCK176 [cytosol] R-AUM-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops umbellulata AeUmb.TA1851.r1.1UG0002890 R-AUM-1125648 AeUmb.TA1851.r1.1UG0002890 [cytosol] R-AUM-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119513 Pinobanksin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0002890 R-AUM-1125648 AeUmb.TA1851.r1.1UG0002890 [cytosol] R-AUM-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119531 Flavonoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0002890 R-AUM-1125648 AeUmb.TA1851.r1.1UG0002890 [cytosol] R-AUM-1119630 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119630 Resveratrol biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0002910 R-AUM-9645809-2 AeUmb.TA1851.r1.1UG0002910 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.1UG0002910 R-AUM-9645809-2 AeUmb.TA1851.r1.1UG0002910 [nucleoplasm] R-AUM-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675782 Maturation none Aegilops umbellulata AeUmb.TA1851.r1.1UG0002910 R-AUM-9645809-2 AeUmb.TA1851.r1.1UG0002910 [nucleoplasm] R-AUM-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675885 Lagging strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0002930 R-AUM-1125648-2 AeUmb.TA1851.r1.1UG0002930 [cytosol] R-AUM-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119513 Pinobanksin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0002930 R-AUM-1125648-2 AeUmb.TA1851.r1.1UG0002930 [cytosol] R-AUM-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119531 Flavonoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0002930 R-AUM-1125648-2 AeUmb.TA1851.r1.1UG0002930 [cytosol] R-AUM-1119630 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119630 Resveratrol biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0002960 R-AUM-1127318-3 AeUmb.TA1851.r1.1UG0002960 [cytosol] R-AUM-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0002960 R-AUM-1127318-3 AeUmb.TA1851.r1.1UG0002960 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0002960 R-AUM-1127318-3 AeUmb.TA1851.r1.1UG0002960 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0003400 R-AUM-1127804 AeUmb.TA1851.r1.1UG0003400 [cytosol] R-AUM-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119513 Pinobanksin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0003570 R-AUM-1127614-8 AeUmb.TA1851.r1.1UG0003570 [cytosol] R-AUM-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119261 Salicylate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0003570 R-AUM-1127614-8 AeUmb.TA1851.r1.1UG0003570 [cytosol] R-AUM-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119418 Suberin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0003570 R-AUM-1127614-8 AeUmb.TA1851.r1.1UG0003570 [cytosol] R-AUM-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops umbellulata AeUmb.TA1851.r1.1UG0003590 R-AUM-1127614-6 AeUmb.TA1851.r1.1UG0003590 [cytosol] R-AUM-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119261 Salicylate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0003590 R-AUM-1127614-6 AeUmb.TA1851.r1.1UG0003590 [cytosol] R-AUM-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119418 Suberin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0003590 R-AUM-1127614-6 AeUmb.TA1851.r1.1UG0003590 [cytosol] R-AUM-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops umbellulata AeUmb.TA1851.r1.1UG0003600 R-AUM-1127614-5 AeUmb.TA1851.r1.1UG0003600 [cytosol] R-AUM-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119261 Salicylate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0003600 R-AUM-1127614-5 AeUmb.TA1851.r1.1UG0003600 [cytosol] R-AUM-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119418 Suberin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0003600 R-AUM-1127614-5 AeUmb.TA1851.r1.1UG0003600 [cytosol] R-AUM-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops umbellulata AeUmb.TA1851.r1.1UG0003610 R-AUM-1127614 AeUmb.TA1851.r1.1UG0003610 [cytosol] R-AUM-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119261 Salicylate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0003610 R-AUM-1127614 AeUmb.TA1851.r1.1UG0003610 [cytosol] R-AUM-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119418 Suberin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0003610 R-AUM-1127614 AeUmb.TA1851.r1.1UG0003610 [cytosol] R-AUM-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops umbellulata AeUmb.TA1851.r1.1UG0003930 R-AUM-1124742 AeUmb.TA1851.r1.1UG0003930 [cytosol] R-AUM-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119410 Ascorbate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0003930 R-AUM-1124742 AeUmb.TA1851.r1.1UG0003930 [cytosol] R-AUM-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119570 Cytosolic glycolysis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0004340 R-AUM-1124935-2 AeUmb.TA1851.r1.1UG0004340 [cytosol] R-AUM-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119349 S-methylmethionine cycle none Aegilops umbellulata AeUmb.TA1851.r1.1UG0005090 R-AUM-1123150-6 AeUmb.TA1851.r1.1UG0005090 [cytosol] R-AUM-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0005090 R-AUM-1123150-6 AeUmb.TA1851.r1.1UG0005090 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0005090 R-AUM-1123150-6 AeUmb.TA1851.r1.1UG0005090 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0005130 R-AUM-6787241 AeUmb.TA1851.r1.1UG0005130 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.1UG0005270 R-AUM-9639217 AeUmb.TA1851.r1.1UG0005270 [plasma membrane] R-AUM-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9639136 Response to Aluminum stress none Aegilops umbellulata AeUmb.TA1851.r1.1UG0005870 R-AUM-9681885 AeUmb.TA1851.r1.1UG0005870 [Golgi membrane] R-AUM-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops umbellulata AeUmb.TA1851.r1.1UG0006280 R-AUM-5654933 AeUmb.TA1851.r1.1UG0006280 [Golgi lumen] R-AUM-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5654909 Xylan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0006600 R-AUM-8986605 AeUmb.TA1851.r1.1UG0006600 [mitochondrial matrix] R-AUM-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119312 Photorespiration none Aegilops umbellulata AeUmb.TA1851.r1.1UG0006600 R-AUM-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-AUM-1119351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119351 Mitochondrial pyruvate metabolism none Aegilops umbellulata AeUmb.TA1851.r1.1UG0006600 R-AUM-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-AUM-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119533 TCA cycle (plant) none Aegilops umbellulata AeUmb.TA1851.r1.1UG0006630 R-AUM-9611863 AeUmb.TA1851.r1.1UG0006630 [mitochondrial matrix] R-AUM-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119479 Valine degradation none Aegilops umbellulata AeUmb.TA1851.r1.1UG0007320 R-AUM-1128320 AeUmb.TA1851.r1.1UG0007320 [cytosol] R-AUM-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119389 Phenylalanine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0007320 R-AUM-1128320 AeUmb.TA1851.r1.1UG0007320 [cytosol] R-AUM-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119400 Methionine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.1UG0007320 R-AUM-1128320 AeUmb.TA1851.r1.1UG0007320 [cytosol] R-AUM-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119506 tyrosine degradation I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0007480 R-AUM-1127481 AeUmb.TA1851.r1.1UG0007480 [cytosol] R-AUM-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119342 Gamma-glutamyl cycle none Aegilops umbellulata AeUmb.TA1851.r1.1UG0007480 R-AUM-1127481 AeUmb.TA1851.r1.1UG0007480 [cytosol] R-AUM-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119483 Glutathione biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0007510 R-AUM-5138505 AeUmb.TA1851.r1.1UG0007510 [plastid stroma] R-AUM-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119263 Arginine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0007510 R-AUM-5138505 AeUmb.TA1851.r1.1UG0007510 [plastid stroma] R-AUM-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119539 Ornithine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0007510 R-AUM-5138505 AeUmb.TA1851.r1.1UG0007510 [plastid stroma] R-AUM-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119622 Arginine biosynthesis II (acetyl cycle) none Aegilops umbellulata AeUmb.TA1851.r1.1UG0007560 R-AUM-9826705 OSH71 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.1UG0007570 R-AUM-9826705-2 OSH71 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.1UG0008460 R-AUM-1122851 AeUmb.TA1851.r1.1UG0008460 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.1UG0008480 R-AUM-9826643 AeUmb.TA1851.r1.1UG0008480 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.1UG0008630 R-AUM-9645809 AeUmb.TA1851.r1.1UG0008630 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.1UG0008630 R-AUM-9645809 AeUmb.TA1851.r1.1UG0008630 [nucleoplasm] R-AUM-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675782 Maturation none Aegilops umbellulata AeUmb.TA1851.r1.1UG0008630 R-AUM-9645809 AeUmb.TA1851.r1.1UG0008630 [nucleoplasm] R-AUM-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675885 Lagging strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0008930 R-AUM-5632341 AeUmb.TA1851.r1.1UG0008930 [cytosol] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.1UG0008930 R-AUM-5632221 phospho-AeUmb.TA1851.r1.1UG0008930 [cytosol] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.1UG0008930 R-AUM-5632170 phospho-AeUmb.TA1851.r1.1UG0008930 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.1UG0009370 R-AUM-1129184 AeUmb.TA1851.r1.1UG0009370 [cytosol] R-AUM-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119273 Lysine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0009370 R-AUM-1129184 AeUmb.TA1851.r1.1UG0009370 [cytosol] R-AUM-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119283 Lysine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.1UG0009370 R-AUM-5606505 AeUmb.TA1851.r1.1UG0009370 [plastid stroma] R-AUM-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119419 Lysine biosynthesis VI none Aegilops umbellulata AeUmb.TA1851.r1.1UG0009520 R-AUM-9645809-3 AeUmb.TA1851.r1.1UG0009520 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.1UG0009520 R-AUM-9645809-3 AeUmb.TA1851.r1.1UG0009520 [nucleoplasm] R-AUM-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675782 Maturation none Aegilops umbellulata AeUmb.TA1851.r1.1UG0009520 R-AUM-9645809-3 AeUmb.TA1851.r1.1UG0009520 [nucleoplasm] R-AUM-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675885 Lagging strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0009790 R-AUM-5608164 AeUmb.TA1851.r1.1UG0009790 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.1UG0009790 R-AUM-5608164 AeUmb.TA1851.r1.1UG0009790 [nucleoplasm] R-AUM-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030557 Lateral root initiation none Aegilops umbellulata AeUmb.TA1851.r1.1UG0009790 R-AUM-5608164 AeUmb.TA1851.r1.1UG0009790 [nucleoplasm] R-AUM-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9608575 Reproductive meristem phase change none Aegilops umbellulata AeUmb.TA1851.r1.1UG0009790 R-AUM-9658967 AeUmb.TA1851.r1.1UG0009790 [cytosol] R-AUM-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9608575 Reproductive meristem phase change none Aegilops umbellulata AeUmb.TA1851.r1.1UG0009810 R-AUM-9918268 soluble Starch Synthase (SSIIIA/SSIII-2) [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0010130 R-AUM-1127614-4 AeUmb.TA1851.r1.1UG0010130 [cytosol] R-AUM-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119261 Salicylate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0010130 R-AUM-1127614-4 AeUmb.TA1851.r1.1UG0010130 [cytosol] R-AUM-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119418 Suberin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0010130 R-AUM-1127614-4 AeUmb.TA1851.r1.1UG0010130 [cytosol] R-AUM-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops umbellulata AeUmb.TA1851.r1.1UG0010540 R-AUM-9826597 AeUmb.TA1851.r1.1UG0010540 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.1UG0011120 R-AUM-1126549 AeUmb.TA1851.r1.1UG0011120 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0011290 R-AUM-1125906 AeUmb.TA1851.r1.1UG0011290 [cytosol] R-AUM-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119276 Choline biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.1UG0011340 R-AUM-1130088-2 AeUmb.TA1851.r1.1UG0011340 [plasma membrane] R-AUM-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119314 Cellulose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0011810 R-AUM-1128244 AeUmb.TA1851.r1.1UG0011810 [chloroplast] R-AUM-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119348 Ent-kaurene biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0011910 R-AUM-8986771-2 AeUmb.TA1851.r1.1UG0011910 [plasma membrane] R-AUM-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8986768 Anther and pollen development none Aegilops umbellulata AeUmb.TA1851.r1.1UG0012360 R-AUM-9640786 AeUmb.TA1851.r1.1UG0012360 [nucleoplasm] R-AUM-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640882 Assembly of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.1UG0012360 R-AUM-9640786 AeUmb.TA1851.r1.1UG0012360 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.1UG0012360 R-AUM-9640786 AeUmb.TA1851.r1.1UG0012360 [nucleoplasm] R-AUM-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675824 DNA replication Initiation none Aegilops umbellulata AeUmb.TA1851.r1.1UG0013270 R-AUM-1129569 AeUmb.TA1851.r1.1UG0013270 [cytosol] R-AUM-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119379 Flavin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0013580 R-AUM-9826654 AeUmb.TA1851.r1.1UG0013580 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.1UG0013840 R-AUM-9640698 AeUmb.TA1851.r1.1UG0013840 [nucleoplasm] R-AUM-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640887 G1/S transition none Aegilops umbellulata AeUmb.TA1851.r1.1UG0013910 R-AUM-9645938 AeUmb.TA1851.r1.1UG0013910 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.1UG0013910 R-AUM-9645938 AeUmb.TA1851.r1.1UG0013910 [nucleoplasm] R-AUM-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675824 DNA replication Initiation none Aegilops umbellulata AeUmb.TA1851.r1.1UG0014040 R-AUM-1130101 AeUmb.TA1851.r1.1UG0014040 [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0014410 R-AUM-1128528 AeUmb.TA1851.r1.1UG0014410 [plasma membrane] R-AUM-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119314 Cellulose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0014700 R-AUM-5683263-2 AeUmb.TA1851.r1.1UG0014700 [cytosol] R-AUM-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119586 Cyanate degradation none Aegilops umbellulata AeUmb.TA1851.r1.1UG0014740 R-AUM-9640789 AeUmb.TA1851.r1.1UG0014740 [nucleoplasm] R-AUM-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640760 G1 phase none Aegilops umbellulata AeUmb.TA1851.r1.1UG0015090 R-AUM-5632268 AeUmb.TA1851.r1.1UG0015090 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.1UG0015330 R-AUM-5608161 AeUmb.TA1851.r1.1UG0015330 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.1UG0016060 R-AUM-1123250 AeUmb.TA1851.r1.1UG0016060 [cytosol] R-AUM-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119265 Tetrahydrofolate biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0016060 R-AUM-1123250 AeUmb.TA1851.r1.1UG0016060 [cytosol] R-AUM-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119523 Tetrahydrofolate biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.1UG0016350 R-AUM-9640731 AeUmb.TA1851.r1.1UG0016350 [nucleoplasm] R-AUM-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640882 Assembly of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.1UG0016430 R-AUM-9675845 AeUmb.TA1851.r1.1UG0016430 [nucleoplasm] R-AUM-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675782 Maturation none Aegilops umbellulata AeUmb.TA1851.r1.1UG0016520 R-AUM-1123296 AeUmb.TA1851.r1.1UG0016520 [chloroplast envelope] R-AUM-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119402 Phospholipid biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0016580 R-AUM-8879004 AeUmb.TA1851.r1.1UG0016580 [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.1UG0016960 R-AUM-1124096-2 AeUmb.TA1851.r1.1UG0016960 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0017050 R-AUM-1125928 AeUmb.TA1851.r1.1UG0017050 [cytosol] R-AUM-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119484 Folate polyglutamylation II none Aegilops umbellulata AeUmb.TA1851.r1.1UG0017050 R-AUM-1125928 AeUmb.TA1851.r1.1UG0017050 [cytosol] R-AUM-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119523 Tetrahydrofolate biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.1UG0017050 R-AUM-1125928 AeUmb.TA1851.r1.1UG0017050 [cytosol] R-AUM-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119617 Folate polyglutamylation I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0017070 R-AUM-5146758 AeUmb.TA1851.r1.1UG0017070 [mitochondrial matrix] R-AUM-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119533 TCA cycle (plant) none Aegilops umbellulata AeUmb.TA1851.r1.1UG0017280 R-AUM-5608233 AeUmb.TA1851.r1.1UG0017280 [plasma membrane] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.1UG0017450 R-AUM-9618171 AeUmb.TA1851.r1.1UG0017450 [plasma membrane] R-AUM-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9618218 Arsenic uptake and detoxification none Aegilops umbellulata AeUmb.TA1851.r1.1UG0017500 R-AUM-1128613-2 AeUmb.TA1851.r1.1UG0017500 [cytosol] R-AUM-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119316 Phenylpropanoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0017960 R-AUM-1124788 AeUmb.TA1851.r1.1UG0017960 [cytosol] R-AUM-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119601 Trehalose degradation II none Aegilops umbellulata AeUmb.TA1851.r1.1UG0018220 R-AUM-1127490 AeUmb.TA1851.r1.1UG0018220 [cytosol] R-AUM-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119389 Phenylalanine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0018280 R-AUM-1122830 AeUmb.TA1851.r1.1UG0018280 [cytosol] R-AUM-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119276 Choline biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.1UG0018560 R-AUM-6788007 AeUmb.TA1851.r1.1UG0018560 [cytosol] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.1UG0018630 R-AUM-1129600 AeUmb.TA1851.r1.1UG0018630 [cytosol] R-AUM-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119407 Ureide biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0018710 R-AUM-5632319 phospho-AeUmb.TA1851.r1.1UG0018710 [plasma membrane] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.1UG0019020 R-AUM-6787119 AeUmb.TA1851.r1.1UG0019020 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.1UG0019130 R-AUM-9638999 AeUmb.TA1851.r1.1UG0019130 [cytosol] R-AUM-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119434 Phytic acid biosynthesis (lipid-independent) none Aegilops umbellulata AeUmb.TA1851.r1.1UG0019210 R-AUM-1122783 AeUmb.TA1851.r1.1UG0019210 [chloroplast stroma] R-AUM-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119402 Phospholipid biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0019240 R-AUM-1127989 AeUmb.TA1851.r1.1UG0019240 [plastid stroma] R-AUM-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119430 Chorismate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0019340 R-AUM-1127398 AeUmb.TA1851.r1.1UG0019340 [plasma membrane] R-AUM-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119314 Cellulose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0019340 R-AUM-1127398 AeUmb.TA1851.r1.1UG0019340 [plasma membrane] R-AUM-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9639861 Development of root hair none Aegilops umbellulata AeUmb.TA1851.r1.1UG0019380 R-AUM-8854448 AeUmb.TA1851.r1.1UG0019380 [cytosol] R-AUM-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119276 Choline biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.1UG0019980 R-AUM-5632250 phospho-AeUmb.TA1851.r1.1UG0019980 [plasma membrane] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.1UG0020010 R-AUM-1127087 AeUmb.TA1851.r1.1UG0020010 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0020070 R-AUM-1127899-2 AeUmb.TA1851.r1.1UG0020070 [cytosol] R-AUM-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119370 Sterol biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0020340 R-AUM-4754220 AeUmb.TA1851.r1.1UG0020340 [plastid stroma] R-AUM-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119449 Carotenoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0020340 R-AUM-1126847 AeUmb.TA1851.r1.1UG0020340 [cytosol] R-AUM-1119492 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119492 Lactucaxanthin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0020440 R-AUM-1122593 AeUmb.TA1851.r1.1UG0020440 [cytosol] R-AUM-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119436 Peptidoglycan biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0020440 R-AUM-1122593 AeUmb.TA1851.r1.1UG0020440 [cytosol] R-AUM-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119523 Tetrahydrofolate biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.1UG0020440 R-AUM-1122593 AeUmb.TA1851.r1.1UG0020440 [cytosol] R-AUM-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119617 Folate polyglutamylation I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0020450 R-AUM-1123757 AeUmb.TA1851.r1.1UG0020450 [cytosol] R-AUM-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119460 Isoleucine biosynthesis from threonine none Aegilops umbellulata AeUmb.TA1851.r1.1UG0020450 R-AUM-1123757 AeUmb.TA1851.r1.1UG0020450 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0020450 R-AUM-1123757 AeUmb.TA1851.r1.1UG0020450 [cytosol] R-AUM-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119496 Pantothenate biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0020450 R-AUM-1123757 AeUmb.TA1851.r1.1UG0020450 [cytosol] R-AUM-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119540 Leucine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0020450 R-AUM-1123757 AeUmb.TA1851.r1.1UG0020450 [cytosol] R-AUM-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119544 Pantothenate biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.1UG0020520 R-AUM-1130416 AeUmb.TA1851.r1.1UG0020520 [mitochondrial matrix] R-AUM-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119337 Proline degradation none Aegilops umbellulata AeUmb.TA1851.r1.1UG0020520 R-AUM-1130416 AeUmb.TA1851.r1.1UG0020520 [mitochondrial matrix] R-AUM-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119495 Citrulline biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0020610 R-AUM-1128054 AeUmb.TA1851.r1.1UG0020610 [mitochondrial matrix] R-AUM-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119479 Valine degradation none Aegilops umbellulata AeUmb.TA1851.r1.1UG0020620 R-AUM-1125569 AeUmb.TA1851.r1.1UG0020620 [cytosol] R-AUM-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119516 Trehalose biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0021070 R-AUM-1124078 AeUmb.TA1851.r1.1UG0021070 [plastid stroma] R-AUM-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119430 Chorismate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0021130 R-AUM-8933728 AeUmb.TA1851.r1.1UG0021130 [nucleoplasm] R-AUM-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8933811 Circadian rhythm none Aegilops umbellulata AeUmb.TA1851.r1.1UG0021170 R-AUM-1128380 AeUmb.TA1851.r1.1UG0021170 [plastid stroma] R-AUM-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119430 Chorismate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0022000 R-AUM-1124190 AeUmb.TA1851.r1.1UG0022000 [plastid stroma] R-AUM-1119412 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119412 Chlorophyll a biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0022460 R-AUM-9826699 AeUmb.TA1851.r1.1UG0022460 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.1UG0023120 R-AUM-1124657 AeUmb.TA1851.r1.1UG0023120 [cytosol] R-AUM-1119595 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119595 Mannose degradation none Aegilops umbellulata AeUmb.TA1851.r1.1UG0023120 R-AUM-1124657 AeUmb.TA1851.r1.1UG0023120 [cytosol] R-AUM-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119601 Trehalose degradation II none Aegilops umbellulata AeUmb.TA1851.r1.1UG0023120 R-AUM-1124657 AeUmb.TA1851.r1.1UG0023120 [cytosol] R-AUM-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119628 GDP-mannose metabolism none Aegilops umbellulata AeUmb.TA1851.r1.1UG0023190 R-AUM-1125521-2 AeUmb.TA1851.r1.1UG0023190 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0023620 R-AUM-8879034 HVA1 homolog [vacuolar lumen] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.1UG0023670 R-AUM-9675464 AeUmb.TA1851.r1.1UG0023670 [nucleoplasm] R-AUM-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030654 Primary root development none Aegilops umbellulata AeUmb.TA1851.r1.1UG0023930 R-AUM-9640664 AeUmb.TA1851.r1.1UG0023930 [nucleoplasm] R-AUM-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640760 G1 phase none Aegilops umbellulata AeUmb.TA1851.r1.1UG0024010 R-AUM-5138489 AeUmb.TA1851.r1.1UG0024010 [plastid stroma] R-AUM-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119263 Arginine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0024010 R-AUM-1127893 AeUmb.TA1851.r1.1UG0024010 [cytosol] R-AUM-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119444 Canavanine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0024010 R-AUM-5138489 AeUmb.TA1851.r1.1UG0024010 [plastid stroma] R-AUM-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119622 Arginine biosynthesis II (acetyl cycle) none Aegilops umbellulata AeUmb.TA1851.r1.1UG0024010 R-AUM-5138489 AeUmb.TA1851.r1.1UG0024010 [plastid stroma] R-AUM-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5633340 Citrulline-nitric oxide cycle none Aegilops umbellulata AeUmb.TA1851.r1.1UG0024060 R-AUM-9918267 ISA2 [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0024790 R-AUM-5679398 AeUmb.TA1851.r1.1UG0024790 [cytosol] R-AUM-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5679411 Gibberellin signaling none Aegilops umbellulata AeUmb.TA1851.r1.1UG0024850 R-AUM-4723654 AeUmb.TA1851.r1.1UG0024850 [plastid stroma] R-AUM-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119464 Methylerythritol phosphate pathway none Aegilops umbellulata AeUmb.TA1851.r1.1UG0024850 R-AUM-1130030 AeUmb.TA1851.r1.1UG0024850 [cytosol] R-AUM-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119594 Pyridoxal 5'-phosphate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0024850 R-AUM-1130030 AeUmb.TA1851.r1.1UG0024850 [cytosol] R-AUM-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119629 Thiamine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0025110 R-AUM-1127916 AeUmb.TA1851.r1.1UG0025110 [plastid stroma] R-AUM-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119367 Polyisoprenoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0025110 R-AUM-1127916 AeUmb.TA1851.r1.1UG0025110 [plastid stroma] R-AUM-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119615 Mevalonate pathway none Aegilops umbellulata AeUmb.TA1851.r1.1UG0025650 R-AUM-9640753 AeUmb.TA1851.r1.1UG0025650 [nucleoplasm] R-AUM-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640882 Assembly of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.1UG0025650 R-AUM-9640753 AeUmb.TA1851.r1.1UG0025650 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.1UG0025650 R-AUM-9640753 AeUmb.TA1851.r1.1UG0025650 [nucleoplasm] R-AUM-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675824 DNA replication Initiation none Aegilops umbellulata AeUmb.TA1851.r1.1UG0026060 R-AUM-1123717 AeUmb.TA1851.r1.1UG0026060 [cytosol] R-AUM-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119395 Maackiain biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0026060 R-AUM-1123717 AeUmb.TA1851.r1.1UG0026060 [cytosol] R-AUM-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119453 Medicarpin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0026260 R-AUM-5654756 AeUmb.TA1851.r1.1UG0026260 [cytosol] R-AUM-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119281 Aspartate biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0026260 R-AUM-1123648 AeUmb.TA1851.r1.1UG0026260 [plastid] R-AUM-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119506 tyrosine degradation I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0026260 R-AUM-5631992 AeUmb.TA1851.r1.1UG0026260 [plastid stroma] R-AUM-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119553 Asparagine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0026810 R-AUM-9930249 AeUmb.TA1851.r1.1UG0026810 [nucleoplasm] R-AUM-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9766881 TF network involved in salinity response none Aegilops umbellulata AeUmb.TA1851.r1.1UG0026910 R-AUM-6788154 AeUmb.TA1851.r1.1UG0026910 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.1UG0027240 R-AUM-6787071 AeUmb.TA1851.r1.1UG0027240 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.1UG0027420 R-AUM-9675849 AeUmb.TA1851.r1.1UG0027420 [nucleoplasm] R-AUM-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675824 DNA replication Initiation none Aegilops umbellulata AeUmb.TA1851.r1.1UG0027490 R-AUM-1127913 AeUmb.TA1851.r1.1UG0027490 [cytosol] R-AUM-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119495 Citrulline biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0027490 R-AUM-1127913 AeUmb.TA1851.r1.1UG0027490 [cytosol] R-AUM-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119631 Proline biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0027900 R-AUM-1126172 AeUmb.TA1851.r1.1UG0027900 [cytosol] R-AUM-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119379 Flavin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0029290 R-AUM-9826697 AeUmb.TA1851.r1.1UG0029290 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.1UG0029340 R-AUM-1129539 AeUmb.TA1851.r1.1UG0029340 [cytosol] R-AUM-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119610 Biotin biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.1UG0029380 R-AUM-9640767 AeUmb.TA1851.r1.1UG0029380 [nucleoplasm] R-AUM-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640882 Assembly of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.1UG0029380 R-AUM-9640767 AeUmb.TA1851.r1.1UG0029380 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.1UG0029380 R-AUM-9640767 AeUmb.TA1851.r1.1UG0029380 [nucleoplasm] R-AUM-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675824 DNA replication Initiation none Aegilops umbellulata AeUmb.TA1851.r1.1UG0029750 R-AUM-9924543 CYP714D1/EUI1 [endoplasmic reticulum membrane] R-AUM-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Aegilops umbellulata AeUmb.TA1851.r1.1UG0029900 R-AUM-9639088 AeUmb.TA1851.r1.1UG0029900 [plasma membrane] R-AUM-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9639136 Response to Aluminum stress none Aegilops umbellulata AeUmb.TA1851.r1.1UG0030420 R-AUM-1126996 AeUmb.TA1851.r1.1UG0030420 [cytosol] R-AUM-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119316 Phenylpropanoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0030440 R-AUM-9916302 AeUmb.TA1851.r1.1UG0030440 [nucleoplasm] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.1UG0030520 R-AUM-9681928 AeUmb.TA1851.r1.1UG0030520 [Golgi membrane] R-AUM-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops umbellulata AeUmb.TA1851.r1.1UG0030660 R-AUM-9930304 ACA7 [plasma membrane] R-AUM-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9766881 TF network involved in salinity response none Aegilops umbellulata AeUmb.TA1851.r1.1UG0030670 R-AUM-9025317 AeUmb.TA1851.r1.1UG0030670 [cytosol] R-AUM-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119402 Phospholipid biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0030910 R-AUM-9916179 OsC3H36 [nucleoplasm] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.1UG0032150 R-AUM-6787093 AeUmb.TA1851.r1.1UG0032150 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.1UG0032200 R-AUM-1128973 AeUmb.TA1851.r1.1UG0032200 [cytosol] R-AUM-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0032200 R-AUM-1128973 AeUmb.TA1851.r1.1UG0032200 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0032200 R-AUM-1128973 AeUmb.TA1851.r1.1UG0032200 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0032210 R-AUM-1128973-3 AeUmb.TA1851.r1.1UG0032210 [cytosol] R-AUM-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0032210 R-AUM-1128973-3 AeUmb.TA1851.r1.1UG0032210 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0032210 R-AUM-1128973-3 AeUmb.TA1851.r1.1UG0032210 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0032220 R-AUM-1128973-2 AeUmb.TA1851.r1.1UG0032220 [cytosol] R-AUM-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0032220 R-AUM-1128973-2 AeUmb.TA1851.r1.1UG0032220 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0032220 R-AUM-1128973-2 AeUmb.TA1851.r1.1UG0032220 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0032610 R-AUM-9826682 AeUmb.TA1851.r1.1UG0032610 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.1UG0032840 R-AUM-5608130 AeUmb.TA1851.r1.1UG0032840 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.1UG0033100 R-AUM-1123733 AeUmb.TA1851.r1.1UG0033100 [cytosol] R-AUM-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119484 Folate polyglutamylation II none Aegilops umbellulata AeUmb.TA1851.r1.1UG0033180 R-AUM-1126560 AeUmb.TA1851.r1.1UG0033180 [cytosol] R-AUM-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119516 Trehalose biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0033620 R-AUM-1125997 AeUmb.TA1851.r1.1UG0033620 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.1UG0034010 R-AUM-9607071 AeUmb.TA1851.r1.1UG0034010 [mitochondrion] R-AUM-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9607185 Generation of superoxide radicals none Aegilops umbellulata AeUmb.TA1851.r1.1UG0034030 R-AUM-9675860-2 AeUmb.TA1851.r1.1UG0034030 [nucleoplasm] R-AUM-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675824 DNA replication Initiation none Aegilops umbellulata AeUmb.TA1851.r1.1UG0034860 R-AUM-1124291-3 AeUmb.TA1851.r1.1UG0034860 [cytosol] R-AUM-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0034860 R-AUM-1124291-3 AeUmb.TA1851.r1.1UG0034860 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0034860 R-AUM-1124291-3 AeUmb.TA1851.r1.1UG0034860 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.1UG0034930 R-AUM-9609608-2 AeUmb.TA1851.r1.1UG0034930 [cytosol] R-AUM-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9609573 Tricin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.1UG0034930 R-AUM-9916171-2 OsOMT [cytosol] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.1UG0034930 R-AUM-9916312-2 OsOMT [nucleoplasm] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.2UG0001140 R-AUM-1130302 AeUmb.TA1851.r1.2UG0001140 [cytosol] R-AUM-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119451 Xylose degradation none Aegilops umbellulata AeUmb.TA1851.r1.2UG0002200 R-AUM-9640752 AeUmb.TA1851.r1.2UG0002200 [nucleoplasm] R-AUM-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640882 Assembly of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.2UG0002200 R-AUM-9640752 AeUmb.TA1851.r1.2UG0002200 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.2UG0002340 R-AUM-9025443 AeUmb.TA1851.r1.2UG0002340 [endoplasmic reticulum membrane] R-AUM-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119325 Sphingolipid metabolism none Aegilops umbellulata AeUmb.TA1851.r1.2UG0002630 R-AUM-6786934 AeUmb.TA1851.r1.2UG0002630 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0002840 R-AUM-1122845 AeUmb.TA1851.r1.2UG0002840 [plastid stroma] R-AUM-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119430 Chorismate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0003150 R-AUM-1129585 AeUmb.TA1851.r1.2UG0003150 [cytosol] R-AUM-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119265 Tetrahydrofolate biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0003150 R-AUM-1129585 AeUmb.TA1851.r1.2UG0003150 [cytosol] R-AUM-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119523 Tetrahydrofolate biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.2UG0003300 R-AUM-1129561 AeUmb.TA1851.r1.2UG0003300 [cytosol] R-AUM-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119452 Galactose degradation II none Aegilops umbellulata AeUmb.TA1851.r1.2UG0003300 R-AUM-1129561 AeUmb.TA1851.r1.2UG0003300 [cytosol] R-AUM-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119465 Sucrose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0003330 R-AUM-8987499 AeUmb.TA1851.r1.2UG0003330 [peroxisomal matrix] R-AUM-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119312 Photorespiration none Aegilops umbellulata AeUmb.TA1851.r1.2UG0003330 R-AUM-1130222 AeUmb.TA1851.r1.2UG0003330 [cytosol] R-AUM-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119596 Glutamate biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0003420 R-AUM-5679443 AeUmb.TA1851.r1.2UG0003420 [nucleoplasm] R-AUM-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5679411 Gibberellin signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0003420 R-AUM-5679443 AeUmb.TA1851.r1.2UG0003420 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0003420 R-AUM-6787090 AeUmb.TA1851.r1.2UG0003420 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0003530 R-AUM-1123534 AeUmb.TA1851.r1.2UG0003530 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0003980 R-AUM-9681895 AeUmb.TA1851.r1.2UG0003980 [Golgi membrane] R-AUM-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops umbellulata AeUmb.TA1851.r1.2UG0004170 R-AUM-6787141 AeUmb.TA1851.r1.2UG0004170 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0004980 R-AUM-6788084 AeUmb.TA1851.r1.2UG0004980 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0005010 R-AUM-1123819 AeUmb.TA1851.r1.2UG0005010 [plastid stroma] R-AUM-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119464 Methylerythritol phosphate pathway none Aegilops umbellulata AeUmb.TA1851.r1.2UG0005250 R-AUM-1123148 AeUmb.TA1851.r1.2UG0005250 [cytosol] R-AUM-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119300 Glycolipid desaturation none Aegilops umbellulata AeUmb.TA1851.r1.2UG0005840 R-AUM-5632334 AeUmb.TA1851.r1.2UG0005840 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0005840 R-AUM-5632197 phospho-AeUmb.TA1851.r1.2UG0005840 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0005840 R-AUM-5632183 phospho-AeUmb.TA1851.r1.2UG0005840 [cytosol] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0005840 R-AUM-5632334 AeUmb.TA1851.r1.2UG0005840 [nucleoplasm] R-AUM-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5679411 Gibberellin signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0005900 R-AUM-1125237 AeUmb.TA1851.r1.2UG0005900 [mitochondrial matrix] R-AUM-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119533 TCA cycle (plant) none Aegilops umbellulata AeUmb.TA1851.r1.2UG0006330 R-AUM-1127614-11 AeUmb.TA1851.r1.2UG0006330 [cytosol] R-AUM-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119261 Salicylate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0006330 R-AUM-1127614-11 AeUmb.TA1851.r1.2UG0006330 [cytosol] R-AUM-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119418 Suberin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0006330 R-AUM-1127614-11 AeUmb.TA1851.r1.2UG0006330 [cytosol] R-AUM-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops umbellulata AeUmb.TA1851.r1.2UG0006360 R-AUM-1127614-10 AeUmb.TA1851.r1.2UG0006360 [cytosol] R-AUM-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119261 Salicylate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0006360 R-AUM-1127614-10 AeUmb.TA1851.r1.2UG0006360 [cytosol] R-AUM-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119418 Suberin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0006360 R-AUM-1127614-10 AeUmb.TA1851.r1.2UG0006360 [cytosol] R-AUM-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops umbellulata AeUmb.TA1851.r1.2UG0007320 R-AUM-9025789 AeUmb.TA1851.r1.2UG0007320 [cytosol] R-AUM-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9025754 Mugineic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0007890 R-AUM-1127614-7 AeUmb.TA1851.r1.2UG0007890 [cytosol] R-AUM-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119261 Salicylate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0007890 R-AUM-1127614-7 AeUmb.TA1851.r1.2UG0007890 [cytosol] R-AUM-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119418 Suberin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0007890 R-AUM-1127614-7 AeUmb.TA1851.r1.2UG0007890 [cytosol] R-AUM-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops umbellulata AeUmb.TA1851.r1.2UG0008090 R-AUM-1129816 AeUmb.TA1851.r1.2UG0008090 [plastid stroma] R-AUM-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119367 Polyisoprenoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0008090 R-AUM-1129816 AeUmb.TA1851.r1.2UG0008090 [plastid stroma] R-AUM-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119615 Mevalonate pathway none Aegilops umbellulata AeUmb.TA1851.r1.2UG0008550 R-AUM-1125494 AeUmb.TA1851.r1.2UG0008550 [endoplasmic reticulum membrane] R-AUM-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119402 Phospholipid biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0008750 R-AUM-9640708 phospho-AeUmb.TA1851.r1.2UG0008750 [nucleoplasm] R-AUM-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640760 G1 phase none Aegilops umbellulata AeUmb.TA1851.r1.2UG0008750 R-AUM-9640770 AeUmb.TA1851.r1.2UG0008750 [nucleoplasm] R-AUM-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640760 G1 phase none Aegilops umbellulata AeUmb.TA1851.r1.2UG0008750 R-AUM-9640708 phospho-AeUmb.TA1851.r1.2UG0008750 [nucleoplasm] R-AUM-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640887 G1/S transition none Aegilops umbellulata AeUmb.TA1851.r1.2UG0008770 R-AUM-9918206 AeUmb.TA1851.r1.2UG0008770 [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0008820 R-AUM-1122433-2 AeUmb.TA1851.r1.2UG0008820 [mitochondrial inner membrane] R-AUM-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119533 TCA cycle (plant) none Aegilops umbellulata AeUmb.TA1851.r1.2UG0009420 R-AUM-9035727 AeUmb.TA1851.r1.2UG0009420 [cytosol] R-AUM-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9035605 Regulation of seed size none Aegilops umbellulata AeUmb.TA1851.r1.2UG0009420 R-AUM-9035692 AeUmb.TA1851.r1.2UG0009420 [nucleoplasm] R-AUM-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9035605 Regulation of seed size none Aegilops umbellulata AeUmb.TA1851.r1.2UG0009480 R-AUM-9638996 AeUmb.TA1851.r1.2UG0009480 [cytosol] R-AUM-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119434 Phytic acid biosynthesis (lipid-independent) none Aegilops umbellulata AeUmb.TA1851.r1.2UG0009760 R-AUM-9675357 AeUmb.TA1851.r1.2UG0009760 [nucleoplasm] R-AUM-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030680 Crown root development none Aegilops umbellulata AeUmb.TA1851.r1.2UG0010420 R-AUM-5146760 AeUmb.TA1851.r1.2UG0010420 [mitochondrial matrix] R-AUM-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119533 TCA cycle (plant) none Aegilops umbellulata AeUmb.TA1851.r1.2UG0010460 R-AUM-1127705-2 AeUmb.TA1851.r1.2UG0010460 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.2UG0010900 R-AUM-8933730 AeUmb.TA1851.r1.2UG0010900 [nucleoplasm] R-AUM-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8933811 Circadian rhythm none Aegilops umbellulata AeUmb.TA1851.r1.2UG0010910 R-AUM-9658589 AeUmb.TA1851.r1.2UG0010910 [endoplasmic reticulum lumen] R-AUM-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119502 Allantoin degradation none Aegilops umbellulata AeUmb.TA1851.r1.2UG0011170 R-AUM-1125038 AeUmb.TA1851.r1.2UG0011170 [plastid stroma] R-AUM-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119449 Carotenoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0011570 R-AUM-5632266 AeUmb.TA1851.r1.2UG0011570 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0011570 R-AUM-5632266 AeUmb.TA1851.r1.2UG0011570 [nucleoplasm] R-AUM-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5679411 Gibberellin signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0011900 R-AUM-8987473 AeUmb.TA1851.r1.2UG0011900 [peroxisomal matrix] R-AUM-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119312 Photorespiration none Aegilops umbellulata AeUmb.TA1851.r1.2UG0011900 R-AUM-1122329 AeUmb.TA1851.r1.2UG0011900 [cytosol] R-AUM-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119596 Glutamate biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0011910 R-AUM-6787000 AeUmb.TA1851.r1.2UG0011910 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0011910 R-AUM-6787036 AeUmb.TA1851.r1.2UG0011910 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0011950 R-AUM-1129247 AeUmb.TA1851.r1.2UG0011950 [mitochondrial inner membrane] R-AUM-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119533 TCA cycle (plant) none Aegilops umbellulata AeUmb.TA1851.r1.2UG0012040 R-AUM-9826652 OSH15 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.2UG0012630 R-AUM-8987548 AeUmb.TA1851.r1.2UG0012630 [peroxisomal matrix] R-AUM-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119312 Photorespiration none Aegilops umbellulata AeUmb.TA1851.r1.2UG0012670 R-AUM-8934299 AeUmb.TA1851.r1.2UG0012670 [nucleoplasm] R-AUM-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934036 Long day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.2UG0012670 R-AUM-8934299 AeUmb.TA1851.r1.2UG0012670 [nucleoplasm] R-AUM-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934257 Transition from vegetative to reproductive shoot apical meristem none Aegilops umbellulata AeUmb.TA1851.r1.2UG0012670 R-AUM-8934299 AeUmb.TA1851.r1.2UG0012670 [nucleoplasm] R-AUM-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9609102 Flower development none Aegilops umbellulata AeUmb.TA1851.r1.2UG0013070 R-AUM-1129219 AeUmb.TA1851.r1.2UG0013070 [cytosol] R-AUM-1119323 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119323 Lipid-A-precursor biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0013530 R-AUM-9826615 RERJ1 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.2UG0013580 R-AUM-1129879 AeUmb.TA1851.r1.2UG0013580 [cytosol] R-AUM-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119436 Peptidoglycan biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0013600 R-AUM-1126320 AeUmb.TA1851.r1.2UG0013600 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.2UG0013760 R-AUM-1124866-4 AeUmb.TA1851.r1.2UG0013760 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0014530 R-AUM-1128549 AeUmb.TA1851.r1.2UG0014530 [cytosol] R-AUM-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119449 Carotenoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0014720 R-AUM-9646043 AeUmb.TA1851.r1.2UG0014720 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.2UG0014720 R-AUM-9646043 AeUmb.TA1851.r1.2UG0014720 [nucleoplasm] R-AUM-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675782 Maturation none Aegilops umbellulata AeUmb.TA1851.r1.2UG0014720 R-AUM-9646043 AeUmb.TA1851.r1.2UG0014720 [nucleoplasm] R-AUM-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675815 Leading strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0014720 R-AUM-9646043 AeUmb.TA1851.r1.2UG0014720 [nucleoplasm] R-AUM-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675824 DNA replication Initiation none Aegilops umbellulata AeUmb.TA1851.r1.2UG0014720 R-AUM-9646043 AeUmb.TA1851.r1.2UG0014720 [nucleoplasm] R-AUM-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675885 Lagging strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0014840 R-AUM-1127911 AeUmb.TA1851.r1.2UG0014840 [mitochondrial matrix] R-AUM-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119365 Lysine degradation II none Aegilops umbellulata AeUmb.TA1851.r1.2UG0015010 R-AUM-5608203 AeUmb.TA1851.r1.2UG0015010 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0015010 R-AUM-5608203 AeUmb.TA1851.r1.2UG0015010 [nucleoplasm] R-AUM-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9608575 Reproductive meristem phase change none Aegilops umbellulata AeUmb.TA1851.r1.2UG0015010 R-AUM-9658968 AeUmb.TA1851.r1.2UG0015010 [cytosol] R-AUM-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9608575 Reproductive meristem phase change none Aegilops umbellulata AeUmb.TA1851.r1.2UG0015040 R-AUM-6787123 AeUmb.TA1851.r1.2UG0015040 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0015040 R-AUM-6786942 AeUmb.TA1851.r1.2UG0015040 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0015140 R-AUM-9930242 AeUmb.TA1851.r1.2UG0015140 [nucleoplasm] R-AUM-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9766881 TF network involved in salinity response none Aegilops umbellulata AeUmb.TA1851.r1.2UG0015610 R-AUM-1128989 AeUmb.TA1851.r1.2UG0015610 [plastid stroma] R-AUM-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119509 Histidine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0015880 R-AUM-1124977 AeUmb.TA1851.r1.2UG0015880 [cytosol] R-AUM-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119586 Cyanate degradation none Aegilops umbellulata AeUmb.TA1851.r1.2UG0016280 R-AUM-8854121 AeUmb.TA1851.r1.2UG0016280 [cytosol] R-AUM-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119556 Choline biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0016350 R-AUM-8986863-2 AeUmb.TA1851.r1.2UG0016350 [plasma membrane] R-AUM-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8986768 Anther and pollen development none Aegilops umbellulata AeUmb.TA1851.r1.2UG0017270 R-AUM-1124401 AeUmb.TA1851.r1.2UG0017270 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0017360 R-AUM-1124067 AeUmb.TA1851.r1.2UG0017360 [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0017360 R-AUM-9626520 AeUmb.TA1851.r1.2UG0017360 [plastid stroma] R-AUM-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9626305 Regulatory network of nutrient accumulation none Aegilops umbellulata AeUmb.TA1851.r1.2UG0017810 R-AUM-1124087 AeUmb.TA1851.r1.2UG0017810 [cytosol] R-AUM-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119332 Jasmonic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0017810 R-AUM-1124087 AeUmb.TA1851.r1.2UG0017810 [cytosol] R-AUM-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119618 13-LOX and 13-HPL pathway none Aegilops umbellulata AeUmb.TA1851.r1.2UG0017860 R-AUM-1127019 AeUmb.TA1851.r1.2UG0017860 [cytosol] R-AUM-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119458 Glutamate degradation none Aegilops umbellulata AeUmb.TA1851.r1.2UG0017930 R-AUM-9029354 AeUmb.TA1851.r1.2UG0017930 [extracellular region] R-AUM-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9766881 TF network involved in salinity response none Aegilops umbellulata AeUmb.TA1851.r1.2UG0017970 R-AUM-4754219 AeUmb.TA1851.r1.2UG0017970 [plastid stroma] R-AUM-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119449 Carotenoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0018160 R-AUM-1128835 AeUmb.TA1851.r1.2UG0018160 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0018580 R-AUM-1127873 AeUmb.TA1851.r1.2UG0018580 [plastid stroma] R-AUM-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119424 Plastid glycolysis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0018580 R-AUM-1127873 AeUmb.TA1851.r1.2UG0018580 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.2UG0018710 R-AUM-9766876 AeUmb.TA1851.r1.2UG0018710 [nucleoplasm] R-AUM-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9766881 TF network involved in salinity response none Aegilops umbellulata AeUmb.TA1851.r1.2UG0018800 R-AUM-5632200 AeUmb.TA1851.r1.2UG0018800 [cytosol] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0018900 R-AUM-1128637-2 AeUmb.TA1851.r1.2UG0018900 [chloroplast] R-AUM-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119494 Tryptophan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0018950 R-AUM-1123551 AeUmb.TA1851.r1.2UG0018950 [chloroplast] R-AUM-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119579 Glycine betaine biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.2UG0019170 R-AUM-1125533 AeUmb.TA1851.r1.2UG0019170 [cytosol] R-AUM-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119304 Putrescine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.2UG0019880 R-AUM-9639957 AeUmb.TA1851.r1.2UG0019880 [plasma membrane] R-AUM-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9639861 Development of root hair none Aegilops umbellulata AeUmb.TA1851.r1.2UG0020030 R-AUM-1130141 AeUmb.TA1851.r1.2UG0020030 [mitochondrial matrix] R-AUM-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119533 TCA cycle (plant) none Aegilops umbellulata AeUmb.TA1851.r1.2UG0020030 R-AUM-1130141 AeUmb.TA1851.r1.2UG0020030 [mitochondrial matrix] R-AUM-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119540 Leucine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0021460 R-AUM-9675272 AeUmb.TA1851.r1.2UG0021460 [plasma membrane] R-AUM-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030654 Primary root development none Aegilops umbellulata AeUmb.TA1851.r1.2UG0021470 R-AUM-1123563-2 AeUmb.TA1851.r1.2UG0021470 [cytosol] R-AUM-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119379 Flavin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0021480 R-AUM-1123563 AeUmb.TA1851.r1.2UG0021480 [cytosol] R-AUM-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119379 Flavin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0021610 R-AUM-1122932 AeUmb.TA1851.r1.2UG0021610 [cytosol] R-AUM-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119317 Spermine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0021610 R-AUM-1122932 AeUmb.TA1851.r1.2UG0021610 [cytosol] R-AUM-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119343 Spermidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0021610 R-AUM-1122932 AeUmb.TA1851.r1.2UG0021610 [cytosol] R-AUM-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119446 Lysine degradation I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0021720 R-AUM-1125317 AeUmb.TA1851.r1.2UG0021720 [cytosol] R-AUM-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119316 Phenylpropanoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0021940 R-AUM-5683299 AeUmb.TA1851.r1.2UG0021940 [cytosol] R-AUM-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119451 Xylose degradation none Aegilops umbellulata AeUmb.TA1851.r1.2UG0022180 R-AUM-8934251 AeUmb.TA1851.r1.2UG0022180 [nucleoplasm] R-AUM-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934108 Short day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.2UG0022470 R-AUM-9640689-2 AeUmb.TA1851.r1.2UG0022470 [nucleoplasm] R-AUM-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675782 Maturation none Aegilops umbellulata AeUmb.TA1851.r1.2UG0022470 R-AUM-9640689-2 AeUmb.TA1851.r1.2UG0022470 [nucleoplasm] R-AUM-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675815 Leading strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0022470 R-AUM-9640689-2 AeUmb.TA1851.r1.2UG0022470 [nucleoplasm] R-AUM-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675885 Lagging strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0023120 R-AUM-9025541 AeUmb.TA1851.r1.2UG0023120 [endoplasmic reticulum membrane] R-AUM-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119325 Sphingolipid metabolism none Aegilops umbellulata AeUmb.TA1851.r1.2UG0023180 R-AUM-9918222 AeUmb.TA1851.r1.2UG0023180 [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0023760 R-AUM-2685732 AeUmb.TA1851.r1.2UG0023760 [cytosol] R-AUM-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119580 IAA biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.2UG0023900 R-AUM-1127614-3 AeUmb.TA1851.r1.2UG0023900 [cytosol] R-AUM-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119261 Salicylate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0023900 R-AUM-1127614-3 AeUmb.TA1851.r1.2UG0023900 [cytosol] R-AUM-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119418 Suberin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0023900 R-AUM-1127614-3 AeUmb.TA1851.r1.2UG0023900 [cytosol] R-AUM-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops umbellulata AeUmb.TA1851.r1.2UG0023910 R-AUM-1127614-9 AeUmb.TA1851.r1.2UG0023910 [cytosol] R-AUM-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119261 Salicylate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0023910 R-AUM-1127614-9 AeUmb.TA1851.r1.2UG0023910 [cytosol] R-AUM-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119418 Suberin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0023910 R-AUM-1127614-9 AeUmb.TA1851.r1.2UG0023910 [cytosol] R-AUM-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops umbellulata AeUmb.TA1851.r1.2UG0023920 R-AUM-1127614-2 AeUmb.TA1851.r1.2UG0023920 [cytosol] R-AUM-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119261 Salicylate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0023920 R-AUM-1127614-2 AeUmb.TA1851.r1.2UG0023920 [cytosol] R-AUM-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119418 Suberin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0023920 R-AUM-1127614-2 AeUmb.TA1851.r1.2UG0023920 [cytosol] R-AUM-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops umbellulata AeUmb.TA1851.r1.2UG0024080 R-AUM-1128298 AeUmb.TA1851.r1.2UG0024080 [cytosol] R-AUM-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119271 Threonine degradation none Aegilops umbellulata AeUmb.TA1851.r1.2UG0024080 R-AUM-1128298 AeUmb.TA1851.r1.2UG0024080 [cytosol] R-AUM-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119610 Biotin biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.2UG0024410 R-AUM-1122855 AeUmb.TA1851.r1.2UG0024410 [cytosol] R-AUM-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119360 Fructan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0024760 R-AUM-9658643 AeUmb.TA1851.r1.2UG0024760 [cytosol] R-AUM-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119567 Beta-alanine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0024930 R-AUM-9025791 AeUmb.TA1851.r1.2UG0024930 [plasma membrane] R-AUM-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9025727 Iron uptake and transport in root vascular system none Aegilops umbellulata AeUmb.TA1851.r1.2UG0025140 R-AUM-6786973 AeUmb.TA1851.r1.2UG0025140 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0025270 R-AUM-6787093-2 AeUmb.TA1851.r1.2UG0025270 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0025570 R-AUM-1129892 AeUmb.TA1851.r1.2UG0025570 [cytosol] R-AUM-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119334 Ethylene biosynthesis from methionine none Aegilops umbellulata AeUmb.TA1851.r1.2UG0025570 R-AUM-1129892 AeUmb.TA1851.r1.2UG0025570 [cytosol] R-AUM-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119624 Methionine salvage pathway none Aegilops umbellulata AeUmb.TA1851.r1.2UG0025660 R-AUM-1125093 AeUmb.TA1851.r1.2UG0025660 [cytosol] R-AUM-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119456 Brassinosteroid biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.2UG0025680 R-AUM-1126602 AeUmb.TA1851.r1.2UG0025680 [cytosol] R-AUM-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119273 Lysine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0025680 R-AUM-1126602 AeUmb.TA1851.r1.2UG0025680 [cytosol] R-AUM-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119283 Lysine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.2UG0025680 R-AUM-5606494 AeUmb.TA1851.r1.2UG0025680 [plastid stroma] R-AUM-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119419 Lysine biosynthesis VI none Aegilops umbellulata AeUmb.TA1851.r1.2UG0025690 R-AUM-3899389 AeUmb.TA1851.r1.2UG0025690 [plasma membrane] R-AUM-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-3899351 Abscisic acid (ABA) mediated signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0025690 R-AUM-3899371 phospho-AeUmb.TA1851.r1.2UG0025690 [plasma membrane] R-AUM-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-3899351 Abscisic acid (ABA) mediated signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0025980 R-AUM-9675851 AeUmb.TA1851.r1.2UG0025980 [nucleoplasm] R-AUM-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675815 Leading strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0026010 R-AUM-6787864 AeUmb.TA1851.r1.2UG0026010 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0026440 R-AUM-1128815 AeUmb.TA1851.r1.2UG0026440 [cytosol] R-AUM-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119452 Galactose degradation II none Aegilops umbellulata AeUmb.TA1851.r1.2UG0026440 R-AUM-1128815 AeUmb.TA1851.r1.2UG0026440 [cytosol] R-AUM-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119465 Sucrose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0026590 R-AUM-1129277 AeUmb.TA1851.r1.2UG0026590 [cytosol] R-AUM-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119460 Isoleucine biosynthesis from threonine none Aegilops umbellulata AeUmb.TA1851.r1.2UG0026590 R-AUM-1129277 AeUmb.TA1851.r1.2UG0026590 [cytosol] R-AUM-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119496 Pantothenate biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0026590 R-AUM-1129277 AeUmb.TA1851.r1.2UG0026590 [cytosol] R-AUM-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119540 Leucine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0026590 R-AUM-1129277 AeUmb.TA1851.r1.2UG0026590 [cytosol] R-AUM-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119544 Pantothenate biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.2UG0026830 R-AUM-1126615 AeUmb.TA1851.r1.2UG0026830 [cytosol] R-AUM-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119437 Glutathione redox reactions I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0027120 R-AUM-9924407-2 EXPB5 [basolateral plasma membrane] R-AUM-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops umbellulata AeUmb.TA1851.r1.2UG0027130 R-AUM-9924407 EXPB5 [basolateral plasma membrane] R-AUM-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops umbellulata AeUmb.TA1851.r1.2UG0027260 R-AUM-5367777 AeUmb.TA1851.r1.2UG0027260 [plastid stroma] R-AUM-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5367729 Strigolactone biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0027270 R-AUM-5138507 AeUmb.TA1851.r1.2UG0027270 [plastid stroma] R-AUM-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119263 Arginine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0027270 R-AUM-5138507 AeUmb.TA1851.r1.2UG0027270 [plastid stroma] R-AUM-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119539 Ornithine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0027270 R-AUM-5138507 AeUmb.TA1851.r1.2UG0027270 [plastid stroma] R-AUM-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119622 Arginine biosynthesis II (acetyl cycle) none Aegilops umbellulata AeUmb.TA1851.r1.2UG0027340 R-AUM-1128812 AeUmb.TA1851.r1.2UG0027340 [cytosol] R-AUM-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119393 Asparagine degradation I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0027370 R-AUM-1128298-4 AeUmb.TA1851.r1.2UG0027370 [cytosol] R-AUM-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119271 Threonine degradation none Aegilops umbellulata AeUmb.TA1851.r1.2UG0027370 R-AUM-1128298-4 AeUmb.TA1851.r1.2UG0027370 [cytosol] R-AUM-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119610 Biotin biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.2UG0027880 R-AUM-9026148 AeUmb.TA1851.r1.2UG0027880 [mitochondrion] R-AUM-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119458 Glutamate degradation none Aegilops umbellulata AeUmb.TA1851.r1.2UG0028200 R-AUM-9826677 AeUmb.TA1851.r1.2UG0028200 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.2UG0028280 R-AUM-2731026-2 AeUmb.TA1851.r1.2UG0028280 [endoplasmic reticulum membrane] R-AUM-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119557 GA12 biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0028280 R-AUM-1130405-3 AeUmb.TA1851.r1.2UG0028280 [endoplasmic reticulum membrane] R-AUM-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119557 GA12 biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0028730 R-AUM-2731026-3 AeUmb.TA1851.r1.2UG0028730 [endoplasmic reticulum membrane] R-AUM-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119557 GA12 biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0028730 R-AUM-1130405 AeUmb.TA1851.r1.2UG0028730 [endoplasmic reticulum membrane] R-AUM-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119557 GA12 biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0029440 R-AUM-9675818-2 AeUmb.TA1851.r1.2UG0029440 [nucleoplasm] R-AUM-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675815 Leading strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0030500 R-AUM-6786926-4 AeUmb.TA1851.r1.2UG0030500 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0030880 R-AUM-9675878 AeUmb.TA1851.r1.2UG0030880 [nucleoplasm] R-AUM-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675782 Maturation none Aegilops umbellulata AeUmb.TA1851.r1.2UG0031350 R-AUM-5221147 AeUmb.TA1851.r1.2UG0031350 [cytosol] R-AUM-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-3899351 Abscisic acid (ABA) mediated signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0031630 R-AUM-1125584 AeUmb.TA1851.r1.2UG0031630 [plastid stroma] R-AUM-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119509 Histidine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0031690 R-AUM-1129564 AeUmb.TA1851.r1.2UG0031690 [cytosol] R-AUM-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119428 GDP-D-rhamnose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0031690 R-AUM-9681913 AeUmb.TA1851.r1.2UG0031690 [Golgi membrane] R-AUM-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops umbellulata AeUmb.TA1851.r1.2UG0031690 R-AUM-1129564 AeUmb.TA1851.r1.2UG0031690 [cytosol] R-AUM-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops umbellulata AeUmb.TA1851.r1.2UG0031920 R-AUM-8879040 AeUmb.TA1851.r1.2UG0031920 [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.2UG0032060 R-AUM-9618186 AeUmb.TA1851.r1.2UG0032060 [plant-type vacuole membrane] R-AUM-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9618218 Arsenic uptake and detoxification none Aegilops umbellulata AeUmb.TA1851.r1.2UG0032300 R-AUM-8987539 AeUmb.TA1851.r1.2UG0032300 [peroxisomal matrix] R-AUM-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119312 Photorespiration none Aegilops umbellulata AeUmb.TA1851.r1.2UG0032300 R-AUM-1127383 AeUmb.TA1851.r1.2UG0032300 [cytosol] R-AUM-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119596 Glutamate biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0032310 R-AUM-8987488 AeUmb.TA1851.r1.2UG0032310 [mitochondrial matrix] R-AUM-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119312 Photorespiration none Aegilops umbellulata AeUmb.TA1851.r1.2UG0032400 R-AUM-1127243 AeUmb.TA1851.r1.2UG0032400 [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0032590 R-AUM-1125974-2 AeUmb.TA1851.r1.2UG0032590 [cytosol] R-AUM-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119262 Threonine biosynthesis from homoserine none Aegilops umbellulata AeUmb.TA1851.r1.2UG0032590 R-AUM-1125974-2 AeUmb.TA1851.r1.2UG0032590 [cytosol] R-AUM-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119400 Methionine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.2UG0032600 R-AUM-1126305 AeUmb.TA1851.r1.2UG0032600 [cytosol] R-AUM-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119332 Jasmonic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0033190 R-AUM-1126269 AeUmb.TA1851.r1.2UG0033190 [mitochondrial matrix] R-AUM-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119479 Valine degradation none Aegilops umbellulata AeUmb.TA1851.r1.2UG0033650 R-AUM-5654913-2 AeUmb.TA1851.r1.2UG0033650 [Golgi lumen] R-AUM-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5654909 Xylan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0034450 R-AUM-6787257-2 AeUmb.TA1851.r1.2UG0034450 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0034450 R-AUM-6787976-2 AeUmb.TA1851.r1.2UG0034450 [cytosol] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0034450 R-AUM-6787257-2 AeUmb.TA1851.r1.2UG0034450 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0034470 R-AUM-1129029 AeUmb.TA1851.r1.2UG0034470 [cytosol] R-AUM-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119501 S-adenosyl-L-methionine cycle none Aegilops umbellulata AeUmb.TA1851.r1.2UG0034540 R-AUM-1128613-3 AeUmb.TA1851.r1.2UG0034540 [cytosol] R-AUM-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119316 Phenylpropanoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0034600 R-AUM-5608137 AeUmb.TA1851.r1.2UG0034600 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0034800 R-AUM-2672431 AeUmb.TA1851.r1.2UG0034800 [cytosol] R-AUM-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119322 Leucodelphinidin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0034800 R-AUM-2672431 AeUmb.TA1851.r1.2UG0034800 [cytosol] R-AUM-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0034800 R-AUM-1124195 AeUmb.TA1851.r1.2UG0034800 [cytosol] R-AUM-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119531 Flavonoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0034810 R-AUM-1129029-2 AeUmb.TA1851.r1.2UG0034810 [cytosol] R-AUM-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119501 S-adenosyl-L-methionine cycle none Aegilops umbellulata AeUmb.TA1851.r1.2UG0034830 R-AUM-9766892 SAPK1 [nucleoplasm] R-AUM-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9766881 TF network involved in salinity response none Aegilops umbellulata AeUmb.TA1851.r1.2UG0035040 R-AUM-9675426 AeUmb.TA1851.r1.2UG0035040 [nucleoplasm] R-AUM-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030654 Primary root development none Aegilops umbellulata AeUmb.TA1851.r1.2UG0035250 R-AUM-9675426-3 AeUmb.TA1851.r1.2UG0035250 [nucleoplasm] R-AUM-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030654 Primary root development none Aegilops umbellulata AeUmb.TA1851.r1.2UG0035370 R-AUM-9681905 AeUmb.TA1851.r1.2UG0035370 [Golgi membrane] R-AUM-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops umbellulata AeUmb.TA1851.r1.2UG0035400 R-AUM-5632226 AeUmb.TA1851.r1.2UG0035400 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0036520 R-AUM-6787173 AeUmb.TA1851.r1.2UG0036520 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0036520 R-AUM-6786972 AeUmb.TA1851.r1.2UG0036520 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0036790 R-AUM-5654750-4 AeUmb.TA1851.r1.2UG0036790 [cytosol] R-AUM-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119393 Asparagine degradation I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0036800 R-AUM-5654750-2 AeUmb.TA1851.r1.2UG0036800 [cytosol] R-AUM-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119393 Asparagine degradation I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0036810 R-AUM-5654750-3 AeUmb.TA1851.r1.2UG0036810 [cytosol] R-AUM-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119393 Asparagine degradation I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0036910 R-AUM-1126602-2 AeUmb.TA1851.r1.2UG0036910 [cytosol] R-AUM-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119273 Lysine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0036910 R-AUM-1126602-2 AeUmb.TA1851.r1.2UG0036910 [cytosol] R-AUM-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119283 Lysine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.2UG0036910 R-AUM-5606494-2 AeUmb.TA1851.r1.2UG0036910 [plastid stroma] R-AUM-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119419 Lysine biosynthesis VI none Aegilops umbellulata AeUmb.TA1851.r1.2UG0037200 R-AUM-9920344 AeUmb.TA1851.r1.2UG0037200 [nucleoplasm] R-AUM-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934108 Short day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.2UG0037310 R-AUM-1126860 AeUmb.TA1851.r1.2UG0037310 [cytosol] R-AUM-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119321 Glycerol degradation I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0037390 R-AUM-1123150-5 AeUmb.TA1851.r1.2UG0037390 [cytosol] R-AUM-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0037390 R-AUM-1123150-5 AeUmb.TA1851.r1.2UG0037390 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0037390 R-AUM-1123150-5 AeUmb.TA1851.r1.2UG0037390 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0037400 R-AUM-1123150-9 AeUmb.TA1851.r1.2UG0037400 [cytosol] R-AUM-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0037400 R-AUM-1123150-9 AeUmb.TA1851.r1.2UG0037400 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0037400 R-AUM-1123150-9 AeUmb.TA1851.r1.2UG0037400 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0037410 R-AUM-1123150-3 AeUmb.TA1851.r1.2UG0037410 [cytosol] R-AUM-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0037410 R-AUM-1123150-3 AeUmb.TA1851.r1.2UG0037410 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0037410 R-AUM-1123150-3 AeUmb.TA1851.r1.2UG0037410 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0037600 R-AUM-1125417 AeUmb.TA1851.r1.2UG0037600 [cytosol] R-AUM-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119265 Tetrahydrofolate biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0037600 R-AUM-1125417 AeUmb.TA1851.r1.2UG0037600 [cytosol] R-AUM-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119523 Tetrahydrofolate biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.2UG0037910 R-AUM-5632242 AeUmb.TA1851.r1.2UG0037910 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0037930 R-AUM-5632242-2 AeUmb.TA1851.r1.2UG0037930 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0038120 R-AUM-1130308 AeUmb.TA1851.r1.2UG0038120 [plastid stroma] R-AUM-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119430 Chorismate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0038260 R-AUM-1128463-2 AeUmb.TA1851.r1.2UG0038260 [cytosol] R-AUM-1119550 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119550 Gentiodelphin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0038270 R-AUM-1128463 AeUmb.TA1851.r1.2UG0038270 [cytosol] R-AUM-1119550 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119550 Gentiodelphin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0038280 R-AUM-1128463-3 AeUmb.TA1851.r1.2UG0038280 [cytosol] R-AUM-1119550 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119550 Gentiodelphin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0038610 R-AUM-1126354-2 AeUmb.TA1851.r1.2UG0038610 [cytosol] R-AUM-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119531 Flavonoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0039410 R-AUM-1129811 AeUmb.TA1851.r1.2UG0039410 [mitochondrion] R-AUM-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119403 Removal of superoxide radicals none Aegilops umbellulata AeUmb.TA1851.r1.2UG0040400 R-AUM-9611465 AeUmb.TA1851.r1.2UG0040400 [nucleoplasm] R-AUM-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops umbellulata AeUmb.TA1851.r1.2UG0040400 R-AUM-9611445 AeUmb.TA1851.r1.2UG0040400 [nucleoplasm] R-AUM-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops umbellulata AeUmb.TA1851.r1.2UG0040490 R-AUM-5603891 AeUmb.TA1851.r1.2UG0040490 [plastid stroma] R-AUM-1119420 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119420 Glutamate biosynthesis V none Aegilops umbellulata AeUmb.TA1851.r1.2UG0040490 R-AUM-1125410 AeUmb.TA1851.r1.2UG0040490 [chloroplast stroma] R-AUM-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119443 Ammonia assimilation cycle none Aegilops umbellulata AeUmb.TA1851.r1.2UG0040830 R-AUM-1129311 AeUmb.TA1851.r1.2UG0040830 [cytosol] R-AUM-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0041370 R-AUM-1127820 AeUmb.TA1851.r1.2UG0041370 [plasma membrane] R-AUM-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119314 Cellulose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0041630 R-AUM-1124206 AeUmb.TA1851.r1.2UG0041630 [cytosol] R-AUM-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119403 Removal of superoxide radicals none Aegilops umbellulata AeUmb.TA1851.r1.2UG0041630 R-AUM-1124206 AeUmb.TA1851.r1.2UG0041630 [cytosol] R-AUM-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops umbellulata AeUmb.TA1851.r1.2UG0042050 R-AUM-1123477 AeUmb.TA1851.r1.2UG0042050 [cytosol] R-AUM-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119451 Xylose degradation none Aegilops umbellulata AeUmb.TA1851.r1.2UG0042930 R-AUM-9826657 AeUmb.TA1851.r1.2UG0042930 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.2UG0043690 R-AUM-1123087 AeUmb.TA1851.r1.2UG0043690 [plasma membrane] R-AUM-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119314 Cellulose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0044050 R-AUM-9025758 AeUmb.TA1851.r1.2UG0044050 [cytosol] R-AUM-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9025754 Mugineic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0044230 R-AUM-6787018 AeUmb.TA1851.r1.2UG0044230 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0044370 R-AUM-6787254 AeUmb.TA1851.r1.2UG0044370 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0044370 R-AUM-6787112 AeUmb.TA1851.r1.2UG0044370 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0044400 R-AUM-1127527 AeUmb.TA1851.r1.2UG0044400 [cytosol] R-AUM-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Aegilops umbellulata AeUmb.TA1851.r1.2UG0044420 R-AUM-9927865 AeUmb.TA1851.r1.2UG0044420 [nucleoplasm] R-AUM-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934257 Transition from vegetative to reproductive shoot apical meristem none Aegilops umbellulata AeUmb.TA1851.r1.2UG0044480 R-AUM-6788050 AeUmb.TA1851.r1.2UG0044480 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0044890 R-AUM-1124234 AeUmb.TA1851.r1.2UG0044890 [cytosol] R-AUM-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119436 Peptidoglycan biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0045210 R-AUM-9025290 AeUmb.TA1851.r1.2UG0045210 [cytosol] R-AUM-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119267 Phenylalanine degradation III none Aegilops umbellulata AeUmb.TA1851.r1.2UG0045210 R-AUM-1127774 AeUmb.TA1851.r1.2UG0045210 [cytosol] R-AUM-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119460 Isoleucine biosynthesis from threonine none Aegilops umbellulata AeUmb.TA1851.r1.2UG0045210 R-AUM-1127774 AeUmb.TA1851.r1.2UG0045210 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0045210 R-AUM-1127774 AeUmb.TA1851.r1.2UG0045210 [cytosol] R-AUM-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119600 Valine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0045240 R-AUM-9025290-2 AeUmb.TA1851.r1.2UG0045240 [cytosol] R-AUM-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119267 Phenylalanine degradation III none Aegilops umbellulata AeUmb.TA1851.r1.2UG0045240 R-AUM-1127774-2 AeUmb.TA1851.r1.2UG0045240 [cytosol] R-AUM-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119460 Isoleucine biosynthesis from threonine none Aegilops umbellulata AeUmb.TA1851.r1.2UG0045240 R-AUM-1127774-2 AeUmb.TA1851.r1.2UG0045240 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0045240 R-AUM-1127774-2 AeUmb.TA1851.r1.2UG0045240 [cytosol] R-AUM-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119600 Valine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0045550 R-AUM-1129616 AeUmb.TA1851.r1.2UG0045550 [cytosol] R-AUM-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119300 Glycolipid desaturation none Aegilops umbellulata AeUmb.TA1851.r1.2UG0045810 R-AUM-8986771 AeUmb.TA1851.r1.2UG0045810 [plasma membrane] R-AUM-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8986768 Anther and pollen development none Aegilops umbellulata AeUmb.TA1851.r1.2UG0045820 R-AUM-1126883 AeUmb.TA1851.r1.2UG0045820 [cytosol] R-AUM-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119389 Phenylalanine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0045860 R-AUM-8933718 AeUmb.TA1851.r1.2UG0045860 [nucleoplasm] R-AUM-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9928946 Drought escape (DE) via ABA-independent pathway none Aegilops umbellulata AeUmb.TA1851.r1.2UG0046080 R-AUM-1129818 AeUmb.TA1851.r1.2UG0046080 [mitochondrial matrix] R-AUM-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119365 Lysine degradation II none Aegilops umbellulata AeUmb.TA1851.r1.2UG0046080 R-AUM-1173242 AeUmb.TA1851.r1.2UG0046080 [mitochondrial matrix] R-AUM-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119533 TCA cycle (plant) none Aegilops umbellulata AeUmb.TA1851.r1.2UG0046200 R-AUM-1127257 AeUmb.TA1851.r1.2UG0046200 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0046230 R-AUM-1127257-2 AeUmb.TA1851.r1.2UG0046230 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0046360 R-AUM-1129559-4 AeUmb.TA1851.r1.2UG0046360 [plastid stroma] R-AUM-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119308 Momilactone biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0046390 R-AUM-1129559 AeUmb.TA1851.r1.2UG0046390 [plastid stroma] R-AUM-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119308 Momilactone biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0046510 R-AUM-1127509 AeUmb.TA1851.r1.2UG0046510 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.2UG0046540 R-AUM-5367725 AeUmb.TA1851.r1.2UG0046540 [plastid stroma] R-AUM-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5367729 Strigolactone biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0046910 R-AUM-1122373-2 AeUmb.TA1851.r1.2UG0046910 [cytosol] R-AUM-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119304 Putrescine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.2UG0046910 R-AUM-1122373-2 AeUmb.TA1851.r1.2UG0046910 [cytosol] R-AUM-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119447 Putrescine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0046950 R-AUM-1125631 AeUmb.TA1851.r1.2UG0046950 [cytosol] R-AUM-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119321 Glycerol degradation I none Aegilops umbellulata AeUmb.TA1851.r1.2UG0047290 R-AUM-8987531-4 AeUmb.TA1851.r1.2UG0047290 [chloroplast] R-AUM-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119312 Photorespiration none Aegilops umbellulata AeUmb.TA1851.r1.2UG0047290 R-AUM-1125951-4 AeUmb.TA1851.r1.2UG0047290 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.2UG0047300 R-AUM-8987531 AeUmb.TA1851.r1.2UG0047300 [chloroplast] R-AUM-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119312 Photorespiration none Aegilops umbellulata AeUmb.TA1851.r1.2UG0047300 R-AUM-1125951 AeUmb.TA1851.r1.2UG0047300 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.2UG0047390 R-AUM-9618112 AeUmb.TA1851.r1.2UG0047390 [plasma membrane] R-AUM-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9618218 Arsenic uptake and detoxification none Aegilops umbellulata AeUmb.TA1851.r1.2UG0048580 R-AUM-9609608-5 AeUmb.TA1851.r1.2UG0048580 [cytosol] R-AUM-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9609573 Tricin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0048580 R-AUM-9916171-5 OsOMT [cytosol] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.2UG0048580 R-AUM-9916312-5 OsOMT [nucleoplasm] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.2UG0049000 R-AUM-6786904 AeUmb.TA1851.r1.2UG0049000 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0049010 R-AUM-6786904-2 AeUmb.TA1851.r1.2UG0049010 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0049380 R-AUM-9609569 AeUmb.TA1851.r1.2UG0049380 [cytosol] R-AUM-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9609573 Tricin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0049640 R-AUM-1128606 AeUmb.TA1851.r1.2UG0049640 [mitochondrial matrix] R-AUM-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119365 Lysine degradation II none Aegilops umbellulata AeUmb.TA1851.r1.2UG0049640 R-AUM-1173244 AeUmb.TA1851.r1.2UG0049640 [mitochondrial matrix] R-AUM-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119533 TCA cycle (plant) none Aegilops umbellulata AeUmb.TA1851.r1.2UG0049680 R-AUM-5654942 AeUmb.TA1851.r1.2UG0049680 [Golgi lumen] R-AUM-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5654909 Xylan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0050030 R-AUM-1126998-2 AeUmb.TA1851.r1.2UG0050030 [cytosol] R-AUM-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119615 Mevalonate pathway none Aegilops umbellulata AeUmb.TA1851.r1.2UG0050070 R-AUM-5631969 AeUmb.TA1851.r1.2UG0050070 [mitochondrial matrix] R-AUM-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119289 Arginine degradation none Aegilops umbellulata AeUmb.TA1851.r1.2UG0050070 R-AUM-5633275 AeUmb.TA1851.r1.2UG0050070 [cytosol] R-AUM-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119495 Citrulline biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0050100 R-AUM-1126354-3 AeUmb.TA1851.r1.2UG0050100 [cytosol] R-AUM-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119531 Flavonoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0050110 R-AUM-1126354 AeUmb.TA1851.r1.2UG0050110 [cytosol] R-AUM-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119531 Flavonoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0050420 R-AUM-1126344 AeUmb.TA1851.r1.2UG0050420 [plastid stroma] R-AUM-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119529 Sulfate activation for sulfonation none Aegilops umbellulata AeUmb.TA1851.r1.2UG0050460 R-AUM-9640718-2 AeUmb.TA1851.r1.2UG0050460 [nucleoplasm] R-AUM-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640887 G1/S transition none Aegilops umbellulata AeUmb.TA1851.r1.2UG0050500 R-AUM-9640718 AeUmb.TA1851.r1.2UG0050500 [nucleoplasm] R-AUM-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640887 G1/S transition none Aegilops umbellulata AeUmb.TA1851.r1.2UG0050880 R-AUM-1129559-5 AeUmb.TA1851.r1.2UG0050880 [plastid stroma] R-AUM-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119308 Momilactone biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0050900 R-AUM-1123662 AeUmb.TA1851.r1.2UG0050900 [plastid stroma] R-AUM-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119308 Momilactone biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0050920 R-AUM-1129559-3 AeUmb.TA1851.r1.2UG0050920 [plastid stroma] R-AUM-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119308 Momilactone biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0050940 R-AUM-1129559-2 AeUmb.TA1851.r1.2UG0050940 [plastid stroma] R-AUM-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119308 Momilactone biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0051120 R-AUM-1126354-4 AeUmb.TA1851.r1.2UG0051120 [cytosol] R-AUM-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119531 Flavonoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0051520 R-AUM-9640782 AeUmb.TA1851.r1.2UG0051520 [nucleoplasm] R-AUM-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640882 Assembly of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.2UG0051830 R-AUM-9924522 AeUmb.TA1851.r1.2UG0051830 [nucleoplasm] R-AUM-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops umbellulata AeUmb.TA1851.r1.2UG0052150 R-AUM-8879085 AeUmb.TA1851.r1.2UG0052150 [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.2UG0052540 R-AUM-6787056 AeUmb.TA1851.r1.2UG0052540 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.2UG0053030 R-AUM-1123465 AeUmb.TA1851.r1.2UG0053030 [plastid stroma] R-AUM-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119424 Plastid glycolysis none Aegilops umbellulata AeUmb.TA1851.r1.2UG0053030 R-AUM-5633368 AeUmb.TA1851.r1.2UG0053030 [cytosol] R-AUM-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119601 Trehalose degradation II none Aegilops umbellulata AeUmb.TA1851.r1.2UG0053600 R-AUM-5225766 AeUmb.TA1851.r1.2UG0053600 [nucleoplasm] R-AUM-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5225756 Ethylene mediated signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0000080 R-AUM-1125060 AeUmb.TA1851.r1.3UG0000080 [cytosol] R-AUM-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119334 Ethylene biosynthesis from methionine none Aegilops umbellulata AeUmb.TA1851.r1.3UG0000080 R-AUM-1125060 AeUmb.TA1851.r1.3UG0000080 [cytosol] R-AUM-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119624 Methionine salvage pathway none Aegilops umbellulata AeUmb.TA1851.r1.3UG0000110 R-AUM-9916314 OsDOS [nucleoplasm] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.3UG0000200 R-AUM-1125058 AeUmb.TA1851.r1.3UG0000200 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0000270 R-AUM-1122541 AeUmb.TA1851.r1.3UG0000270 [cytosol] R-AUM-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Aegilops umbellulata AeUmb.TA1851.r1.3UG0000270 R-AUM-1122541 AeUmb.TA1851.r1.3UG0000270 [cytosol] R-AUM-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Aegilops umbellulata AeUmb.TA1851.r1.3UG0000720 R-AUM-2885386 AeUmb.TA1851.r1.3UG0000720 [cytosol] R-AUM-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119417 Stachyose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0000870 R-AUM-8854120 AeUmb.TA1851.r1.3UG0000870 [cytosol] R-AUM-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119556 Choline biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0000910 R-AUM-8933813 AeUmb.TA1851.r1.3UG0000910 [nucleoplasm] R-AUM-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8933811 Circadian rhythm none Aegilops umbellulata AeUmb.TA1851.r1.3UG0000910 R-AUM-8933813 AeUmb.TA1851.r1.3UG0000910 [nucleoplasm] R-AUM-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934036 Long day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.3UG0000910 R-AUM-8933813 AeUmb.TA1851.r1.3UG0000910 [nucleoplasm] R-AUM-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops umbellulata AeUmb.TA1851.r1.3UG0000910 R-AUM-8933813 AeUmb.TA1851.r1.3UG0000910 [nucleoplasm] R-AUM-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9928946 Drought escape (DE) via ABA-independent pathway none Aegilops umbellulata AeUmb.TA1851.r1.3UG0001130 R-AUM-9645866 AeUmb.TA1851.r1.3UG0001130 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.3UG0001130 R-AUM-9645866 AeUmb.TA1851.r1.3UG0001130 [nucleoplasm] R-AUM-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675824 DNA replication Initiation none Aegilops umbellulata AeUmb.TA1851.r1.3UG0001670 R-AUM-1128678 AeUmb.TA1851.r1.3UG0001670 [cytosol] R-AUM-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119292 Cytokinins 7-N-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0001670 R-AUM-1128678 AeUmb.TA1851.r1.3UG0001670 [cytosol] R-AUM-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119375 Cytokinins 9-N-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0001670 R-AUM-1128678 AeUmb.TA1851.r1.3UG0001670 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0001700 R-AUM-1128678-3 AeUmb.TA1851.r1.3UG0001700 [cytosol] R-AUM-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119292 Cytokinins 7-N-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0001700 R-AUM-1128678-3 AeUmb.TA1851.r1.3UG0001700 [cytosol] R-AUM-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119375 Cytokinins 9-N-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0001700 R-AUM-1128678-3 AeUmb.TA1851.r1.3UG0001700 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0001720 R-AUM-1128678-2 AeUmb.TA1851.r1.3UG0001720 [cytosol] R-AUM-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119292 Cytokinins 7-N-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0001720 R-AUM-1128678-2 AeUmb.TA1851.r1.3UG0001720 [cytosol] R-AUM-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119375 Cytokinins 9-N-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0001720 R-AUM-1128678-2 AeUmb.TA1851.r1.3UG0001720 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0001740 R-AUM-1128678-4 AeUmb.TA1851.r1.3UG0001740 [cytosol] R-AUM-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119292 Cytokinins 7-N-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0001740 R-AUM-1128678-4 AeUmb.TA1851.r1.3UG0001740 [cytosol] R-AUM-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119375 Cytokinins 9-N-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0001740 R-AUM-1128678-4 AeUmb.TA1851.r1.3UG0001740 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0002140 R-AUM-1122471 AeUmb.TA1851.r1.3UG0002140 [cytosol] R-AUM-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119276 Choline biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.3UG0002650 R-AUM-1127076-2 AeUmb.TA1851.r1.3UG0002650 [cytosol] R-AUM-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119418 Suberin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0002650 R-AUM-1127076-2 AeUmb.TA1851.r1.3UG0002650 [cytosol] R-AUM-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops umbellulata AeUmb.TA1851.r1.3UG0002680 R-AUM-5632139 AeUmb.TA1851.r1.3UG0002680 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0002810 R-AUM-9675827 AeUmb.TA1851.r1.3UG0002810 [nucleoplasm] R-AUM-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675782 Maturation none Aegilops umbellulata AeUmb.TA1851.r1.3UG0002810 R-AUM-9675827 AeUmb.TA1851.r1.3UG0002810 [nucleoplasm] R-AUM-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675815 Leading strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0002810 R-AUM-9675827 AeUmb.TA1851.r1.3UG0002810 [nucleoplasm] R-AUM-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675885 Lagging strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0002870 R-AUM-5632315 AeUmb.TA1851.r1.3UG0002870 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0002870 R-AUM-5632284 phospho-AeUmb.TA1851.r1.3UG0002870 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0002870 R-AUM-5632277 phospho-AeUmb.TA1851.r1.3UG0002870 [cytosol] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0002870 R-AUM-5632315 AeUmb.TA1851.r1.3UG0002870 [nucleoplasm] R-AUM-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5679411 Gibberellin signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0003130 R-AUM-1125698 AeUmb.TA1851.r1.3UG0003130 [cytosol] R-AUM-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119436 Peptidoglycan biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0004460 R-AUM-6787202 AeUmb.TA1851.r1.3UG0004460 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0004860 R-AUM-1129411 AeUmb.TA1851.r1.3UG0004860 [cytosol] R-AUM-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119496 Pantothenate biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0004860 R-AUM-1129411 AeUmb.TA1851.r1.3UG0004860 [cytosol] R-AUM-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119544 Pantothenate biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.3UG0005040 R-AUM-1126395 AeUmb.TA1851.r1.3UG0005040 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0005060 R-AUM-1124096 AeUmb.TA1851.r1.3UG0005060 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0005200 R-AUM-9611557 RAC1 [plasma membrane] R-AUM-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops umbellulata AeUmb.TA1851.r1.3UG0005270 R-AUM-1126435 AeUmb.TA1851.r1.3UG0005270 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0005580 R-AUM-6787066 AeUmb.TA1851.r1.3UG0005580 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0005620 R-AUM-9675365 AeUmb.TA1851.r1.3UG0005620 [nucleoplasm] R-AUM-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675508 Root elongation none Aegilops umbellulata AeUmb.TA1851.r1.3UG0006080 R-AUM-5679436 AeUmb.TA1851.r1.3UG0006080 [nucleoplasm] R-AUM-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5679411 Gibberellin signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0006380 R-AUM-6787229 AeUmb.TA1851.r1.3UG0006380 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0006380 R-AUM-9826659 AeUmb.TA1851.r1.3UG0006380 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.3UG0006680 R-AUM-9675273 AeUmb.TA1851.r1.3UG0006680 [nucleoplasm] R-AUM-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030557 Lateral root initiation none Aegilops umbellulata AeUmb.TA1851.r1.3UG0006840 R-AUM-5632301 AeUmb.TA1851.r1.3UG0006840 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0006840 R-AUM-5632301 AeUmb.TA1851.r1.3UG0006840 [nucleoplasm] R-AUM-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5654828 Strigolactone signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0006840 R-AUM-5632301 AeUmb.TA1851.r1.3UG0006840 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0007350 R-AUM-4788601 AeUmb.TA1851.r1.3UG0007350 [plastid stroma] R-AUM-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119509 Histidine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0007660 R-AUM-9607132 RBOHB [plasma membrane] R-AUM-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops umbellulata AeUmb.TA1851.r1.3UG0007660 R-AUM-9611529 phospho-phosphorylated-RBOHB [plasma membrane] R-AUM-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops umbellulata AeUmb.TA1851.r1.3UG0008180 R-AUM-1123596 AeUmb.TA1851.r1.3UG0008180 [plastid stroma] R-AUM-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119509 Histidine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0009030 R-AUM-8987535 AeUmb.TA1851.r1.3UG0009030 [chloroplast] R-AUM-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119312 Photorespiration none Aegilops umbellulata AeUmb.TA1851.r1.3UG0009500 R-AUM-1126625 AeUmb.TA1851.r1.3UG0009500 [cytosol] R-AUM-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119334 Ethylene biosynthesis from methionine none Aegilops umbellulata AeUmb.TA1851.r1.3UG0009500 R-AUM-1126625 AeUmb.TA1851.r1.3UG0009500 [cytosol] R-AUM-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119501 S-adenosyl-L-methionine cycle none Aegilops umbellulata AeUmb.TA1851.r1.3UG0009500 R-AUM-1126625 AeUmb.TA1851.r1.3UG0009500 [cytosol] R-AUM-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119624 Methionine salvage pathway none Aegilops umbellulata AeUmb.TA1851.r1.3UG0009500 R-AUM-9025797 AeUmb.TA1851.r1.3UG0009500 [cytosol] R-AUM-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9025754 Mugineic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0009580 R-AUM-1127695 AeUmb.TA1851.r1.3UG0009580 [plastid stroma] R-AUM-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119430 Chorismate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0010160 R-AUM-2685730 AeUmb.TA1851.r1.3UG0010160 [cytosol] R-AUM-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119580 IAA biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.3UG0010180 R-AUM-9612380 AeUmb.TA1851.r1.3UG0010180 [cytosol] R-AUM-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119612 Cysteine degradation none Aegilops umbellulata AeUmb.TA1851.r1.3UG0010460 R-AUM-9640761 AeUmb.TA1851.r1.3UG0010460 [nucleoplasm] R-AUM-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640882 Assembly of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.3UG0010460 R-AUM-9640761 AeUmb.TA1851.r1.3UG0010460 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.3UG0010460 R-AUM-9640761 AeUmb.TA1851.r1.3UG0010460 [nucleoplasm] R-AUM-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675824 DNA replication Initiation none Aegilops umbellulata AeUmb.TA1851.r1.3UG0010700 R-AUM-5679401 AeUmb.TA1851.r1.3UG0010700 [nucleoplasm] R-AUM-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5679411 Gibberellin signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0011160 R-AUM-9608693 AeUmb.TA1851.r1.3UG0011160 [cytosol] R-AUM-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9608575 Reproductive meristem phase change none Aegilops umbellulata AeUmb.TA1851.r1.3UG0012230 R-AUM-9684771 AeUmb.TA1851.r1.3UG0012230 [cytosol] R-AUM-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9609102 Flower development none Aegilops umbellulata AeUmb.TA1851.r1.3UG0012570 R-AUM-9684771-3 AeUmb.TA1851.r1.3UG0012570 [cytosol] R-AUM-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9609102 Flower development none Aegilops umbellulata AeUmb.TA1851.r1.3UG0012750 R-AUM-5632188 AeUmb.TA1851.r1.3UG0012750 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0013010 R-AUM-1125570-2 AeUmb.TA1851.r1.3UG0013010 [cytosol] R-AUM-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119450 Homocysteine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0013100 R-AUM-1130327-3 AeUmb.TA1851.r1.3UG0013100 [cytosol] R-AUM-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119586 Cyanate degradation none Aegilops umbellulata AeUmb.TA1851.r1.3UG0013120 R-AUM-1123694 AeUmb.TA1851.r1.3UG0013120 [plastid stroma] R-AUM-1119274 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119274 Monoterpene biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0013120 R-AUM-1123694 AeUmb.TA1851.r1.3UG0013120 [plastid stroma] R-AUM-1119593 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119593 Oleoresin monoterpene volatiles biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0013260 R-AUM-1128126 AeUmb.TA1851.r1.3UG0013260 [endosome] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0013260 R-AUM-5679348 AeUmb.TA1851.r1.3UG0013260 [plasma membrane] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0013420 R-AUM-1126875 AeUmb.TA1851.r1.3UG0013420 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0014130 R-AUM-4752547 AeUmb.TA1851.r1.3UG0014130 [plastid stroma] R-AUM-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119498 Phylloquinone biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0014440 R-AUM-9612372 AeUmb.TA1851.r1.3UG0014440 [mitochondrial matrix] R-AUM-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119612 Cysteine degradation none Aegilops umbellulata AeUmb.TA1851.r1.3UG0014600 R-AUM-5608132 AeUmb.TA1851.r1.3UG0014600 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0014880 R-AUM-8854110 AeUmb.TA1851.r1.3UG0014880 [cytosol] R-AUM-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119556 Choline biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0014900 R-AUM-1129466 AeUmb.TA1851.r1.3UG0014900 [cytosol] R-AUM-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119449 Carotenoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0014960 R-AUM-8858063 AeUmb.TA1851.r1.3UG0014960 [plasma membrane] R-AUM-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8858053 Polar auxin transport none Aegilops umbellulata AeUmb.TA1851.r1.3UG0015030 R-AUM-6787204 AeUmb.TA1851.r1.3UG0015030 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0015080 R-AUM-8934263 AeUmb.TA1851.r1.3UG0015080 [nucleoplasm] R-AUM-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934036 Long day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.3UG0015190 R-AUM-8987557 AeUmb.TA1851.r1.3UG0015190 [mitochondrial matrix] R-AUM-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119312 Photorespiration none Aegilops umbellulata AeUmb.TA1851.r1.3UG0015480 R-AUM-6787238 AeUmb.TA1851.r1.3UG0015480 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0015640 R-AUM-1130006 AeUmb.TA1851.r1.3UG0015640 [plastid stroma] R-AUM-1119569 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119569 Kievitone biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0016030 R-AUM-1124970 AeUmb.TA1851.r1.3UG0016030 [cytosol] R-AUM-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119556 Choline biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0016120 R-AUM-1130059 AeUmb.TA1851.r1.3UG0016120 [cytosol] R-AUM-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119262 Threonine biosynthesis from homoserine none Aegilops umbellulata AeUmb.TA1851.r1.3UG0016320 R-AUM-5632121 AeUmb.TA1851.r1.3UG0016320 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0016760 R-AUM-9640785 AeUmb.TA1851.r1.3UG0016760 [nucleoplasm] R-AUM-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640882 Assembly of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.3UG0016760 R-AUM-9640785 AeUmb.TA1851.r1.3UG0016760 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.3UG0016780 R-AUM-8987467 AeUmb.TA1851.r1.3UG0016780 [chloroplast] R-AUM-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119502 Allantoin degradation none Aegilops umbellulata AeUmb.TA1851.r1.3UG0016830 R-AUM-1129859 AeUmb.TA1851.r1.3UG0016830 [chloroplast stroma] R-AUM-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119443 Ammonia assimilation cycle none Aegilops umbellulata AeUmb.TA1851.r1.3UG0016830 R-AUM-5606382 AeUmb.TA1851.r1.3UG0016830 [plastid stroma] R-AUM-1119535 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119535 Glutamate biosynthesis IV none Aegilops umbellulata AeUmb.TA1851.r1.3UG0017040 R-AUM-9640723 AeUmb.TA1851.r1.3UG0017040 [nucleoplasm] R-AUM-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640887 G1/S transition none Aegilops umbellulata AeUmb.TA1851.r1.3UG0017160 R-AUM-1124692 AeUmb.TA1851.r1.3UG0017160 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0017570 R-AUM-5367761 AeUmb.TA1851.r1.3UG0017570 [plastid stroma] R-AUM-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5367729 Strigolactone biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0017830 R-AUM-1126981 AeUmb.TA1851.r1.3UG0017830 [nucleoplasm] R-AUM-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030680 Crown root development none Aegilops umbellulata AeUmb.TA1851.r1.3UG0018080 R-AUM-1127292 AeUmb.TA1851.r1.3UG0018080 [plastid stroma] R-AUM-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Aegilops umbellulata AeUmb.TA1851.r1.3UG0018240 R-AUM-9607105 AeUmb.TA1851.r1.3UG0018240 [mitochondrion] R-AUM-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9607185 Generation of superoxide radicals none Aegilops umbellulata AeUmb.TA1851.r1.3UG0018310 R-AUM-1124809 AeUmb.TA1851.r1.3UG0018310 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0018830 R-AUM-1127753 AeUmb.TA1851.r1.3UG0018830 [cytosol] R-AUM-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119278 PRPP biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0018970 R-AUM-1128798 AeUmb.TA1851.r1.3UG0018970 [cytosol] R-AUM-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119331 Cysteine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0019240 R-AUM-6788120 AeUmb.TA1851.r1.3UG0019240 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0019240 R-AUM-6788120 AeUmb.TA1851.r1.3UG0019240 [nucleoplasm] R-AUM-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9766881 TF network involved in salinity response none Aegilops umbellulata AeUmb.TA1851.r1.3UG0019250 R-AUM-1124491 AeUmb.TA1851.r1.3UG0019250 [plasma membrane] R-AUM-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119314 Cellulose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0019420 R-AUM-1124083 AeUmb.TA1851.r1.3UG0019420 [cytosol] R-AUM-1119323 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119323 Lipid-A-precursor biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0019520 R-AUM-5608212 AeUmb.TA1851.r1.3UG0019520 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0019520 R-AUM-5608212 AeUmb.TA1851.r1.3UG0019520 [nucleoplasm] R-AUM-9675304 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675304 Lateral root emergence none Aegilops umbellulata AeUmb.TA1851.r1.3UG0019850 R-AUM-1123745-2 AeUmb.TA1851.r1.3UG0019850 [endoplasmic reticulum membrane] R-AUM-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119260 Cardiolipin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0019850 R-AUM-1123745-2 AeUmb.TA1851.r1.3UG0019850 [endoplasmic reticulum membrane] R-AUM-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119402 Phospholipid biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0019950 R-AUM-1125734 AeUmb.TA1851.r1.3UG0019950 [cytosol] R-AUM-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119281 Aspartate biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0019950 R-AUM-5632000 AeUmb.TA1851.r1.3UG0019950 [plastid stroma] R-AUM-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119553 Asparagine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0020300 R-AUM-1126095 AeUmb.TA1851.r1.3UG0020300 [cytosol] R-AUM-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119389 Phenylalanine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0020580 R-AUM-6788026 AeUmb.TA1851.r1.3UG0020580 [cytosol] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0020760 R-AUM-1127318 AeUmb.TA1851.r1.3UG0020760 [cytosol] R-AUM-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0020760 R-AUM-1127318 AeUmb.TA1851.r1.3UG0020760 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0020760 R-AUM-1127318 AeUmb.TA1851.r1.3UG0020760 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0021630 R-AUM-9025487 AeUmb.TA1851.r1.3UG0021630 [cytosol] R-AUM-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119325 Sphingolipid metabolism none Aegilops umbellulata AeUmb.TA1851.r1.3UG0022070 R-AUM-9675860 AeUmb.TA1851.r1.3UG0022070 [nucleoplasm] R-AUM-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675824 DNA replication Initiation none Aegilops umbellulata AeUmb.TA1851.r1.3UG0022110 R-AUM-1127999 AeUmb.TA1851.r1.3UG0022110 [mitochondrial inner membrane] R-AUM-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119260 Cardiolipin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0022270 R-AUM-8853988 Phosphatidylglycerophosphatase [mitochondrial matrix] R-AUM-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119260 Cardiolipin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0022510 R-AUM-9025331 AeUmb.TA1851.r1.3UG0022510 [cytosol] R-AUM-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119402 Phospholipid biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0022550 R-AUM-4723690 AeUmb.TA1851.r1.3UG0022550 [plastid stroma] R-AUM-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119464 Methylerythritol phosphate pathway none Aegilops umbellulata AeUmb.TA1851.r1.3UG0022580 R-AUM-1130025 AeUmb.TA1851.r1.3UG0022580 [endosome] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0022580 R-AUM-5679302 AeUmb.TA1851.r1.3UG0022580 [plasma membrane] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0022590 R-AUM-9681915 AeUmb.TA1851.r1.3UG0022590 [Golgi membrane] R-AUM-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops umbellulata AeUmb.TA1851.r1.3UG0022800 R-AUM-1127373 AeUmb.TA1851.r1.3UG0022800 [cytosol] R-AUM-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119297 Beta-alanine biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.3UG0022810 R-AUM-6788041 AeUmb.TA1851.r1.3UG0022810 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0022950 R-AUM-9608678 AeUmb.TA1851.r1.3UG0022950 [cytosol] R-AUM-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9608575 Reproductive meristem phase change none Aegilops umbellulata AeUmb.TA1851.r1.3UG0022950 R-AUM-8986843 AeUmb.TA1851.r1.3UG0022950 [nucleoplasm] R-AUM-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9608575 Reproductive meristem phase change none Aegilops umbellulata AeUmb.TA1851.r1.3UG0023000 R-AUM-9618135 AeUmb.TA1851.r1.3UG0023000 [plasma membrane] R-AUM-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9618218 Arsenic uptake and detoxification none Aegilops umbellulata AeUmb.TA1851.r1.3UG0023160 R-AUM-1123610-2 AeUmb.TA1851.r1.3UG0023160 [cytosol] R-AUM-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119389 Phenylalanine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0023160 R-AUM-1123610-2 AeUmb.TA1851.r1.3UG0023160 [cytosol] R-AUM-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119400 Methionine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.3UG0023160 R-AUM-1123610-2 AeUmb.TA1851.r1.3UG0023160 [cytosol] R-AUM-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119506 tyrosine degradation I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0023310 R-AUM-6788072 AeUmb.TA1851.r1.3UG0023310 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0023500 R-AUM-8868904 AeUmb.TA1851.r1.3UG0023500 [endoplasmic reticulum membrane] R-AUM-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8868949 Intracellular auxin transport none Aegilops umbellulata AeUmb.TA1851.r1.3UG0023660 R-AUM-1123787 AeUmb.TA1851.r1.3UG0023660 [cytosol] R-AUM-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119418 Suberin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0023660 R-AUM-1123787 AeUmb.TA1851.r1.3UG0023660 [cytosol] R-AUM-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops umbellulata AeUmb.TA1851.r1.3UG0023720 R-AUM-9766833 AeUmb.TA1851.r1.3UG0023720 [nucleoplasm] R-AUM-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9766881 TF network involved in salinity response none Aegilops umbellulata AeUmb.TA1851.r1.3UG0023920 R-AUM-9675399 AeUmb.TA1851.r1.3UG0023920 [nucleoplasm] R-AUM-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030654 Primary root development none Aegilops umbellulata AeUmb.TA1851.r1.3UG0024030 R-AUM-6786908 AeUmb.TA1851.r1.3UG0024030 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0024030 R-AUM-6786908 AeUmb.TA1851.r1.3UG0024030 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.3UG0024410 R-AUM-9916309 CPK3 [plasma membrane] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.3UG0024760 R-AUM-9639874 AeUmb.TA1851.r1.3UG0024760 [plasma membrane] R-AUM-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9639861 Development of root hair none Aegilops umbellulata AeUmb.TA1851.r1.3UG0024970 R-AUM-9639018 AeUmb.TA1851.r1.3UG0024970 [cytosol] R-AUM-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119434 Phytic acid biosynthesis (lipid-independent) none Aegilops umbellulata AeUmb.TA1851.r1.3UG0025000 R-AUM-8879076-2 AeUmb.TA1851.r1.3UG0025000 [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.3UG0025020 R-AUM-8879076-3 AeUmb.TA1851.r1.3UG0025020 [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.3UG0025030 R-AUM-8879076 AeUmb.TA1851.r1.3UG0025030 [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.3UG0025060 R-AUM-9930212 AeUmb.TA1851.r1.3UG0025060 [nucleoplasm] R-AUM-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9766881 TF network involved in salinity response none Aegilops umbellulata AeUmb.TA1851.r1.3UG0025520 R-AUM-4415084 AeUmb.TA1851.r1.3UG0025520 [cytosol] R-AUM-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-3899351 Abscisic acid (ABA) mediated signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0025610 R-AUM-1130202 AeUmb.TA1851.r1.3UG0025610 [cytosol] R-AUM-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119410 Ascorbate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0025850 R-AUM-1124269 AeUmb.TA1851.r1.3UG0025850 [cytosol] R-AUM-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119456 Brassinosteroid biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.3UG0025910 R-AUM-5149683 AeUmb.TA1851.r1.3UG0025910 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.3UG0025970 R-AUM-6787181 AeUmb.TA1851.r1.3UG0025970 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0026110 R-AUM-9640886 AeUmb.TA1851.r1.3UG0026110 [nucleoplasm] R-AUM-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640882 Assembly of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.3UG0026110 R-AUM-9640886 AeUmb.TA1851.r1.3UG0026110 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.3UG0026130 R-AUM-8858070 AeUmb.TA1851.r1.3UG0026130 [plasma membrane] R-AUM-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9639861 Development of root hair none Aegilops umbellulata AeUmb.TA1851.r1.3UG0026430 R-AUM-9930216-2 ABI5 [nucleoplasm] R-AUM-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9766881 TF network involved in salinity response none Aegilops umbellulata AeUmb.TA1851.r1.3UG0026460 R-AUM-9930216 ABI5 [nucleoplasm] R-AUM-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9766881 TF network involved in salinity response none Aegilops umbellulata AeUmb.TA1851.r1.3UG0026480 R-AUM-6787863 AeUmb.TA1851.r1.3UG0026480 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0026500 R-AUM-9930216-3 ABI5 [nucleoplasm] R-AUM-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9766881 TF network involved in salinity response none Aegilops umbellulata AeUmb.TA1851.r1.3UG0026920 R-AUM-1124453 AeUmb.TA1851.r1.3UG0026920 [peroxisomal matrix] R-AUM-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119407 Ureide biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0027150 R-AUM-9928771 AeUmb.TA1851.r1.3UG0027150 [nucleoplasm] R-AUM-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9928831 Severe drought none Aegilops umbellulata AeUmb.TA1851.r1.3UG0027240 R-AUM-9645950 AeUmb.TA1851.r1.3UG0027240 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.3UG0027240 R-AUM-9645950 AeUmb.TA1851.r1.3UG0027240 [nucleoplasm] R-AUM-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675782 Maturation none Aegilops umbellulata AeUmb.TA1851.r1.3UG0027240 R-AUM-9645950 AeUmb.TA1851.r1.3UG0027240 [nucleoplasm] R-AUM-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675815 Leading strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0027240 R-AUM-9645950 AeUmb.TA1851.r1.3UG0027240 [nucleoplasm] R-AUM-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675824 DNA replication Initiation none Aegilops umbellulata AeUmb.TA1851.r1.3UG0027240 R-AUM-9645950 AeUmb.TA1851.r1.3UG0027240 [nucleoplasm] R-AUM-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675885 Lagging strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0027280 R-AUM-9639111 AeUmb.TA1851.r1.3UG0027280 [plasma membrane] R-AUM-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9639136 Response to Aluminum stress none Aegilops umbellulata AeUmb.TA1851.r1.3UG0028310 R-AUM-5149646 AeUmb.TA1851.r1.3UG0028310 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.3UG0028310 R-AUM-1126652 AeUmb.TA1851.r1.3UG0028310 [cytosol] R-AUM-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119570 Cytosolic glycolysis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0028320 R-AUM-5149646-2 AeUmb.TA1851.r1.3UG0028320 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.3UG0028320 R-AUM-1126652-2 AeUmb.TA1851.r1.3UG0028320 [cytosol] R-AUM-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119570 Cytosolic glycolysis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0028540 R-AUM-1124291 AeUmb.TA1851.r1.3UG0028540 [cytosol] R-AUM-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0028540 R-AUM-1124291 AeUmb.TA1851.r1.3UG0028540 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0028540 R-AUM-1124291 AeUmb.TA1851.r1.3UG0028540 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0028930 R-AUM-9675297 AeUmb.TA1851.r1.3UG0028930 [mitochondrion] R-AUM-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030654 Primary root development none Aegilops umbellulata AeUmb.TA1851.r1.3UG0028990 R-AUM-9639789 AeUmb.TA1851.r1.3UG0028990 [plasma membrane] R-AUM-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9639861 Development of root hair none Aegilops umbellulata AeUmb.TA1851.r1.3UG0029650 R-AUM-1124242 AeUmb.TA1851.r1.3UG0029650 [plastid stroma] R-AUM-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119464 Methylerythritol phosphate pathway none Aegilops umbellulata AeUmb.TA1851.r1.3UG0029850 R-AUM-9675790 AeUmb.TA1851.r1.3UG0029850 [nucleoplasm] R-AUM-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675824 DNA replication Initiation none Aegilops umbellulata AeUmb.TA1851.r1.3UG0029890 R-AUM-9930308 SNAC2 (OsNAC6) [nucleoplasm] R-AUM-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9766881 TF network involved in salinity response none Aegilops umbellulata AeUmb.TA1851.r1.3UG0030580 R-AUM-1122881 AeUmb.TA1851.r1.3UG0030580 [cytosol] R-AUM-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0030580 R-AUM-1122881 AeUmb.TA1851.r1.3UG0030580 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0030580 R-AUM-1122881 AeUmb.TA1851.r1.3UG0030580 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0031720 R-AUM-8986863 AeUmb.TA1851.r1.3UG0031720 [plasma membrane] R-AUM-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8986768 Anther and pollen development none Aegilops umbellulata AeUmb.TA1851.r1.3UG0031970 R-AUM-1124348 AeUmb.TA1851.r1.3UG0031970 [cytosol] R-AUM-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119465 Sucrose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0032380 R-AUM-9675500 AeUmb.TA1851.r1.3UG0032380 [endoplasmic reticulum membrane] R-AUM-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030654 Primary root development none Aegilops umbellulata AeUmb.TA1851.r1.3UG0032600 R-AUM-8934185-5 AeUmb.TA1851.r1.3UG0032600 [nucleoplasm] R-AUM-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934108 Short day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.3UG0032730 R-AUM-8934185-3 AeUmb.TA1851.r1.3UG0032730 [nucleoplasm] R-AUM-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934108 Short day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.3UG0032740 R-AUM-8934185-4 AeUmb.TA1851.r1.3UG0032740 [nucleoplasm] R-AUM-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934108 Short day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.3UG0032750 R-AUM-8934185-2 AeUmb.TA1851.r1.3UG0032750 [nucleoplasm] R-AUM-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934108 Short day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.3UG0033370 R-AUM-1123690 AeUmb.TA1851.r1.3UG0033370 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0033380 R-AUM-1125452 AeUmb.TA1851.r1.3UG0033380 [cytosol] R-AUM-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119273 Lysine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0033380 R-AUM-1125452 AeUmb.TA1851.r1.3UG0033380 [cytosol] R-AUM-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119283 Lysine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.3UG0033380 R-AUM-1125452 AeUmb.TA1851.r1.3UG0033380 [cytosol] R-AUM-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119295 Homoserine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0033380 R-AUM-5606511 AeUmb.TA1851.r1.3UG0033380 [plastid stroma] R-AUM-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119419 Lysine biosynthesis VI none Aegilops umbellulata AeUmb.TA1851.r1.3UG0033390 R-AUM-8879006 AeUmb.TA1851.r1.3UG0033390 [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.3UG0033500 R-AUM-9025492 AeUmb.TA1851.r1.3UG0033500 [endoplasmic reticulum membrane] R-AUM-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119325 Sphingolipid metabolism none Aegilops umbellulata AeUmb.TA1851.r1.3UG0033500 R-AUM-1126933 AeUmb.TA1851.r1.3UG0033500 [cytosol] R-AUM-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119610 Biotin biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.3UG0033630 R-AUM-1123561 AeUmb.TA1851.r1.3UG0033630 [cytosol] R-AUM-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119624 Methionine salvage pathway none Aegilops umbellulata AeUmb.TA1851.r1.3UG0033650 R-AUM-1126955 AeUmb.TA1851.r1.3UG0033650 [plastid] R-AUM-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119407 Ureide biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0034120 R-AUM-1123690-2 AeUmb.TA1851.r1.3UG0034120 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.3UG0035340 R-AUM-1173282 AeUmb.TA1851.r1.3UG0035340 [mitochondrial inner membrane] R-AUM-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119533 TCA cycle (plant) none Aegilops umbellulata AeUmb.TA1851.r1.3UG0035880 R-AUM-1123860 AeUmb.TA1851.r1.3UG0035880 [cytosol] R-AUM-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119292 Cytokinins 7-N-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0035880 R-AUM-1123860 AeUmb.TA1851.r1.3UG0035880 [cytosol] R-AUM-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119375 Cytokinins 9-N-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0035880 R-AUM-1123860 AeUmb.TA1851.r1.3UG0035880 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0035900 R-AUM-5367730 AeUmb.TA1851.r1.3UG0035900 [cytosol] R-AUM-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5367729 Strigolactone biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0036660 R-AUM-9675500-2 AeUmb.TA1851.r1.3UG0036660 [endoplasmic reticulum membrane] R-AUM-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030654 Primary root development none Aegilops umbellulata AeUmb.TA1851.r1.3UG0036740 R-AUM-1125570 AeUmb.TA1851.r1.3UG0036740 [cytosol] R-AUM-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119450 Homocysteine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0036860 R-AUM-9025338 AeUmb.TA1851.r1.3UG0036860 [cytosol] R-AUM-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119402 Phospholipid biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0037180 R-AUM-1127928 AeUmb.TA1851.r1.3UG0037180 [cytosol] R-AUM-1119595 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119595 Mannose degradation none Aegilops umbellulata AeUmb.TA1851.r1.3UG0037180 R-AUM-1127928 AeUmb.TA1851.r1.3UG0037180 [cytosol] R-AUM-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119601 Trehalose degradation II none Aegilops umbellulata AeUmb.TA1851.r1.3UG0037180 R-AUM-1127928 AeUmb.TA1851.r1.3UG0037180 [cytosol] R-AUM-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119628 GDP-mannose metabolism none Aegilops umbellulata AeUmb.TA1851.r1.3UG0038010 R-AUM-5631958 AeUmb.TA1851.r1.3UG0038010 [cytosol] R-AUM-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119289 Arginine degradation none Aegilops umbellulata AeUmb.TA1851.r1.3UG0038010 R-AUM-1122345 AeUmb.TA1851.r1.3UG0038010 [cytosol] R-AUM-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119318 Proline biosynthesis V (from arginine) none Aegilops umbellulata AeUmb.TA1851.r1.3UG0038010 R-AUM-1122345 AeUmb.TA1851.r1.3UG0038010 [cytosol] R-AUM-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119631 Proline biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0038090 R-AUM-1123867 AeUmb.TA1851.r1.3UG0038090 [cytosol] R-AUM-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119370 Sterol biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0038320 R-AUM-1125755 AeUmb.TA1851.r1.3UG0038320 [cytosol] R-AUM-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0039900 R-AUM-1122287 AeUmb.TA1851.r1.3UG0039900 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0039930 R-AUM-1122287-10 AeUmb.TA1851.r1.3UG0039930 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0039940 R-AUM-1122287-15 AeUmb.TA1851.r1.3UG0039940 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0040520 R-AUM-1126488 AeUmb.TA1851.r1.3UG0040520 [mitochondrial inner membrane] R-AUM-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119402 Phospholipid biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0041030 R-AUM-1126048 AeUmb.TA1851.r1.3UG0041030 [mitochondrion] R-AUM-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119407 Ureide biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0041080 R-AUM-1128396 AeUmb.TA1851.r1.3UG0041080 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0041540 R-AUM-8858194-2 AeUmb.TA1851.r1.3UG0041540 [cytosol] R-AUM-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119556 Choline biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0041580 R-AUM-8858194 AeUmb.TA1851.r1.3UG0041580 [cytosol] R-AUM-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119556 Choline biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.3UG0041990 R-AUM-1126436 AeUmb.TA1851.r1.3UG0041990 [cytosol] R-AUM-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119615 Mevalonate pathway none Aegilops umbellulata AeUmb.TA1851.r1.3UG0042320 R-AUM-1124560 AeUmb.TA1851.r1.3UG0042320 [cytosol] R-AUM-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119563 UDP-D-xylose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0042320 R-AUM-9681903 AeUmb.TA1851.r1.3UG0042320 [Golgi lumen] R-AUM-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops umbellulata AeUmb.TA1851.r1.3UG0042320 R-AUM-1124560 AeUmb.TA1851.r1.3UG0042320 [cytosol] R-AUM-5654894 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5654894 UDP-D-apiose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0042650 R-AUM-8868990 AeUmb.TA1851.r1.3UG0042650 [endoplasmic reticulum membrane] R-AUM-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8868949 Intracellular auxin transport none Aegilops umbellulata AeUmb.TA1851.r1.3UG0042960 R-AUM-9766887 AeUmb.TA1851.r1.3UG0042960 [nucleoplasm] R-AUM-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9766881 TF network involved in salinity response none Aegilops umbellulata AeUmb.TA1851.r1.3UG0043600 R-AUM-9609608-9 AeUmb.TA1851.r1.3UG0043600 [cytosol] R-AUM-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9609573 Tricin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.3UG0043600 R-AUM-9916171-9 OsOMT [cytosol] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.3UG0043600 R-AUM-9916312-9 OsOMT [nucleoplasm] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.3UG0043640 R-AUM-9826691 AeUmb.TA1851.r1.3UG0043640 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.3UG0043880 R-AUM-1122373 AeUmb.TA1851.r1.3UG0043880 [cytosol] R-AUM-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119304 Putrescine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.3UG0043880 R-AUM-1122373 AeUmb.TA1851.r1.3UG0043880 [cytosol] R-AUM-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119447 Putrescine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0000290 R-AUM-1125974 AeUmb.TA1851.r1.4UG0000290 [cytosol] R-AUM-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119262 Threonine biosynthesis from homoserine none Aegilops umbellulata AeUmb.TA1851.r1.4UG0000290 R-AUM-1125974 AeUmb.TA1851.r1.4UG0000290 [cytosol] R-AUM-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119400 Methionine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.4UG0000320 R-AUM-1128766 AeUmb.TA1851.r1.4UG0000320 [cytosol] R-AUM-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119452 Galactose degradation II none Aegilops umbellulata AeUmb.TA1851.r1.4UG0000320 R-AUM-1128766 AeUmb.TA1851.r1.4UG0000320 [cytosol] R-AUM-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119465 Sucrose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0000580 R-AUM-9611549-2 phospho-phosphorylated-CERK1 [plasma membrane] R-AUM-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops umbellulata AeUmb.TA1851.r1.4UG0000580 R-AUM-9611466-2 CERK1 [plasma membrane] R-AUM-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops umbellulata AeUmb.TA1851.r1.4UG0000770 R-AUM-9826642 LAZY1 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.4UG0000770 R-AUM-9826622 LAZY1 [plasma membrane] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.4UG0000770 R-AUM-9826642 LAZY1 [nucleoplasm] R-AUM-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops umbellulata AeUmb.TA1851.r1.4UG0000770 R-AUM-9826622 LAZY1 [plasma membrane] R-AUM-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops umbellulata AeUmb.TA1851.r1.4UG0000810 R-AUM-8933787 AeUmb.TA1851.r1.4UG0000810 [nucleoplasm] R-AUM-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8933811 Circadian rhythm none Aegilops umbellulata AeUmb.TA1851.r1.4UG0000850 R-AUM-1125612 AeUmb.TA1851.r1.4UG0000850 [cytosol] R-AUM-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119353 Linear furanocoumarin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0000860 R-AUM-9645872 AeUmb.TA1851.r1.4UG0000860 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.4UG0002330 R-AUM-1129160 AeUmb.TA1851.r1.4UG0002330 [mitochondrial matrix] R-AUM-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119533 TCA cycle (plant) none Aegilops umbellulata AeUmb.TA1851.r1.4UG0002330 R-AUM-1129160 AeUmb.TA1851.r1.4UG0002330 [mitochondrial matrix] R-AUM-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119540 Leucine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0002710 R-AUM-9639018-2 AeUmb.TA1851.r1.4UG0002710 [cytosol] R-AUM-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119434 Phytic acid biosynthesis (lipid-independent) none Aegilops umbellulata AeUmb.TA1851.r1.4UG0002840 R-AUM-1128385 AeUmb.TA1851.r1.4UG0002840 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0003580 R-AUM-1128327 AeUmb.TA1851.r1.4UG0003580 [cytosol] R-AUM-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119267 Phenylalanine degradation III none Aegilops umbellulata AeUmb.TA1851.r1.4UG0003610 R-AUM-9025712-6 AeUmb.TA1851.r1.4UG0003610 [cytosol] R-AUM-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9025754 Mugineic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0003800 R-AUM-1129113 AeUmb.TA1851.r1.4UG0003800 [cytosol] R-AUM-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119298 Glutathione redox reactions II none Aegilops umbellulata AeUmb.TA1851.r1.4UG0003800 R-AUM-1129113 AeUmb.TA1851.r1.4UG0003800 [cytosol] R-AUM-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119437 Glutathione redox reactions I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0004040 R-AUM-8879050 CBF1 homolog [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.4UG0004050 R-AUM-8879050-4 CBF1 homolog [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.4UG0004710 R-AUM-9640689 AeUmb.TA1851.r1.4UG0004710 [nucleoplasm] R-AUM-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675782 Maturation none Aegilops umbellulata AeUmb.TA1851.r1.4UG0004710 R-AUM-9640689 AeUmb.TA1851.r1.4UG0004710 [nucleoplasm] R-AUM-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675815 Leading strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0004710 R-AUM-9640689 AeUmb.TA1851.r1.4UG0004710 [nucleoplasm] R-AUM-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675885 Lagging strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0004720 R-AUM-1127247 AeUmb.TA1851.r1.4UG0004720 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0004960 R-AUM-1129514 AeUmb.TA1851.r1.4UG0004960 [chloroplast] R-AUM-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119579 Glycine betaine biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.4UG0005650 R-AUM-1122369 AeUmb.TA1851.r1.4UG0005650 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0005950 R-AUM-1123797 AeUmb.TA1851.r1.4UG0005950 [cytosol] R-AUM-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119281 Aspartate biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0005950 R-AUM-5632003 AeUmb.TA1851.r1.4UG0005950 [plastid stroma] R-AUM-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119553 Asparagine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0005960 R-AUM-9640704 AeUmb.TA1851.r1.4UG0005960 [nucleoplasm] R-AUM-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640882 Assembly of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.4UG0005960 R-AUM-9640704 AeUmb.TA1851.r1.4UG0005960 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.4UG0005960 R-AUM-9640704 AeUmb.TA1851.r1.4UG0005960 [nucleoplasm] R-AUM-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675824 DNA replication Initiation none Aegilops umbellulata AeUmb.TA1851.r1.4UG0006590 R-AUM-1129203 AeUmb.TA1851.r1.4UG0006590 [cytosol] R-AUM-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119428 GDP-D-rhamnose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0006590 R-AUM-1129203 AeUmb.TA1851.r1.4UG0006590 [cytosol] R-AUM-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops umbellulata AeUmb.TA1851.r1.4UG0006760 R-AUM-1123210 AeUmb.TA1851.r1.4UG0006760 [cytosol] R-AUM-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119516 Trehalose biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0007220 R-AUM-9675354 AeUmb.TA1851.r1.4UG0007220 [nucleoplasm] R-AUM-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675508 Root elongation none Aegilops umbellulata AeUmb.TA1851.r1.4UG0007260 R-AUM-1129068-2 AeUmb.TA1851.r1.4UG0007260 [cytosol] R-AUM-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119460 Isoleucine biosynthesis from threonine none Aegilops umbellulata AeUmb.TA1851.r1.4UG0007260 R-AUM-1129068-2 AeUmb.TA1851.r1.4UG0007260 [cytosol] R-AUM-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119600 Valine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0007430 R-AUM-1129571 AeUmb.TA1851.r1.4UG0007430 [mitochondrion] R-AUM-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119365 Lysine degradation II none Aegilops umbellulata AeUmb.TA1851.r1.4UG0007560 R-AUM-1124797-4 AeUmb.TA1851.r1.4UG0007560 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0007980 R-AUM-1123610 AeUmb.TA1851.r1.4UG0007980 [cytosol] R-AUM-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119389 Phenylalanine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0007980 R-AUM-1123610 AeUmb.TA1851.r1.4UG0007980 [cytosol] R-AUM-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119400 Methionine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.4UG0007980 R-AUM-1123610 AeUmb.TA1851.r1.4UG0007980 [cytosol] R-AUM-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119506 tyrosine degradation I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0008030 R-AUM-5632312 AeUmb.TA1851.r1.4UG0008030 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0008030 R-AUM-5632125 phospho-AeUmb.TA1851.r1.4UG0008030 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0008030 R-AUM-5632342 phospho-AeUmb.TA1851.r1.4UG0008030 [cytosol] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0008030 R-AUM-5632312 AeUmb.TA1851.r1.4UG0008030 [nucleoplasm] R-AUM-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5679411 Gibberellin signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0008470 R-AUM-1127526 AeUmb.TA1851.r1.4UG0008470 [cytosol] R-AUM-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119332 Jasmonic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0008570 R-AUM-9928961 AeUmb.TA1851.r1.4UG0008570 [nucleoplasm] R-AUM-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9928995 Drought escape (DE) via ABA-dependent pathway none Aegilops umbellulata AeUmb.TA1851.r1.4UG0008760 R-AUM-1124797 AeUmb.TA1851.r1.4UG0008760 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0008770 R-AUM-1124797-5 AeUmb.TA1851.r1.4UG0008770 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0009190 R-AUM-1130304 AeUmb.TA1851.r1.4UG0009190 [cytosol] R-AUM-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119291 Nitrate assimilation none Aegilops umbellulata AeUmb.TA1851.r1.4UG0009200 R-AUM-8933714 AeUmb.TA1851.r1.4UG0009200 [nucleoplasm] R-AUM-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8933811 Circadian rhythm none Aegilops umbellulata AeUmb.TA1851.r1.4UG0009570 R-AUM-9675818 AeUmb.TA1851.r1.4UG0009570 [nucleoplasm] R-AUM-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675815 Leading strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0009660 R-AUM-9630306 AeUmb.TA1851.r1.4UG0009660 [nucleoplasm] R-AUM-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640760 G1 phase none Aegilops umbellulata AeUmb.TA1851.r1.4UG0009760 R-AUM-5655106 AeUmb.TA1851.r1.4UG0009760 [Golgi lumen] R-AUM-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5655101 Xyloglucan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0009810 R-AUM-5655076 AeUmb.TA1851.r1.4UG0009810 [Golgi lumen] R-AUM-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5655101 Xyloglucan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0010040 R-AUM-1124797-3 AeUmb.TA1851.r1.4UG0010040 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0010240 R-AUM-5679294 AeUmb.TA1851.r1.4UG0010240 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0010530 R-AUM-8987554 AeUmb.TA1851.r1.4UG0010530 [mitochondrial matrix] R-AUM-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119312 Photorespiration none Aegilops umbellulata AeUmb.TA1851.r1.4UG0010970 R-AUM-3315084 AeUmb.TA1851.r1.4UG0010970 [cytosol] R-AUM-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119342 Gamma-glutamyl cycle none Aegilops umbellulata AeUmb.TA1851.r1.4UG0011000 R-AUM-1122656 AeUmb.TA1851.r1.4UG0011000 [endosome] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0011000 R-AUM-5679312 AeUmb.TA1851.r1.4UG0011000 [plasma membrane] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0011080 R-AUM-9918275 soluble Starch Synthase (SSII-2/SSIIb) [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0011090 R-AUM-1122261 AeUmb.TA1851.r1.4UG0011090 [plastid stroma] R-AUM-1119602 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119602 Phytyl-PP biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0011090 R-AUM-1122261 AeUmb.TA1851.r1.4UG0011090 [plastid stroma] R-AUM-1119605 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119605 Chlorophyll a biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.4UG0011130 R-AUM-9618131 AeUmb.TA1851.r1.4UG0011130 [plasma membrane] R-AUM-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9618218 Arsenic uptake and detoxification none Aegilops umbellulata AeUmb.TA1851.r1.4UG0011220 R-AUM-9025498 AeUmb.TA1851.r1.4UG0011220 [endoplasmic reticulum membrane] R-AUM-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119325 Sphingolipid metabolism none Aegilops umbellulata AeUmb.TA1851.r1.4UG0011370 R-AUM-1127429 AeUmb.TA1851.r1.4UG0011370 [plastid stroma] R-AUM-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119430 Chorismate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0011890 R-AUM-9658702 AeUmb.TA1851.r1.4UG0011890 [plastid stroma] R-AUM-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119297 Beta-alanine biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.4UG0012450 R-AUM-9924576 OsMADS57 [nucleoplasm] R-AUM-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Aegilops umbellulata AeUmb.TA1851.r1.4UG0012760 R-AUM-9025482 AeUmb.TA1851.r1.4UG0012760 [endoplasmic reticulum membrane] R-AUM-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119325 Sphingolipid metabolism none Aegilops umbellulata AeUmb.TA1851.r1.4UG0012870 R-AUM-5632087 AeUmb.TA1851.r1.4UG0012870 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0012890 R-AUM-1127382 AeUmb.TA1851.r1.4UG0012890 [cytosol] R-AUM-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119460 Isoleucine biosynthesis from threonine none Aegilops umbellulata AeUmb.TA1851.r1.4UG0012890 R-AUM-1127382 AeUmb.TA1851.r1.4UG0012890 [cytosol] R-AUM-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119600 Valine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0013070 R-AUM-5655075 AeUmb.TA1851.r1.4UG0013070 [Golgi lumen] R-AUM-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5655101 Xyloglucan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0013550 R-AUM-2960780 AeUmb.TA1851.r1.4UG0013550 [cytosol] R-AUM-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119386 UDP-N-acetylgalactosamine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0013610 R-AUM-1124598 AeUmb.TA1851.r1.4UG0013610 [cytosol] R-AUM-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119300 Glycolipid desaturation none Aegilops umbellulata AeUmb.TA1851.r1.4UG0013670 R-AUM-1123913 AeUmb.TA1851.r1.4UG0013670 [cytosol] R-AUM-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119300 Glycolipid desaturation none Aegilops umbellulata AeUmb.TA1851.r1.4UG0013740 R-AUM-1123092 AeUmb.TA1851.r1.4UG0013740 [cytosol] R-AUM-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119278 PRPP biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0013890 R-AUM-9826666 AeUmb.TA1851.r1.4UG0013890 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.4UG0013900 R-AUM-1125802 AeUmb.TA1851.r1.4UG0013900 [cytosol] R-AUM-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119615 Mevalonate pathway none Aegilops umbellulata AeUmb.TA1851.r1.4UG0014220 R-AUM-1125447 AeUmb.TA1851.r1.4UG0014220 [plastid stroma] R-AUM-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119509 Histidine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0014360 R-AUM-1127815 AeUmb.TA1851.r1.4UG0014360 [cytosol] R-AUM-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119450 Homocysteine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0014440 R-AUM-9916252 OsEGT1 [nucleoplasm] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.4UG0014520 R-AUM-5138486 AeUmb.TA1851.r1.4UG0014520 [plastid stroma] R-AUM-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119263 Arginine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0014520 R-AUM-1123709 AeUmb.TA1851.r1.4UG0014520 [cytosol] R-AUM-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119318 Proline biosynthesis V (from arginine) none Aegilops umbellulata AeUmb.TA1851.r1.4UG0014520 R-AUM-1123709 AeUmb.TA1851.r1.4UG0014520 [cytosol] R-AUM-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119444 Canavanine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0014570 R-AUM-9924558 NCED1 [plastid] R-AUM-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Aegilops umbellulata AeUmb.TA1851.r1.4UG0014590 R-AUM-1128857 AeUmb.TA1851.r1.4UG0014590 [cytosol] R-AUM-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119609 Phaseic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0014720 R-AUM-9025500 AeUmb.TA1851.r1.4UG0014720 [endoplasmic reticulum membrane] R-AUM-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119325 Sphingolipid metabolism none Aegilops umbellulata AeUmb.TA1851.r1.4UG0014740 R-AUM-3321260 AeUmb.TA1851.r1.4UG0014740 [chloroplast stroma] R-AUM-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119287 Vitamin E biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0014760 R-AUM-9826605 OsBRXL1 [plasma membrane] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.4UG0014760 R-AUM-9826610 OsBRXL1 [cytosol] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.4UG0014760 R-AUM-9826605 OsBRXL1 [plasma membrane] R-AUM-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops umbellulata AeUmb.TA1851.r1.4UG0014760 R-AUM-9826610 OsBRXL1 [cytosol] R-AUM-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops umbellulata AeUmb.TA1851.r1.4UG0014990 R-AUM-5149678 AeUmb.TA1851.r1.4UG0014990 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.4UG0015060 R-AUM-1129650 AeUmb.TA1851.r1.4UG0015060 [cytosol] R-AUM-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119418 Suberin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0015370 R-AUM-5138481 AeUmb.TA1851.r1.4UG0015370 [plastid stroma] R-AUM-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119263 Arginine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0015370 R-AUM-5138481 AeUmb.TA1851.r1.4UG0015370 [plastid stroma] R-AUM-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119539 Ornithine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0015510 R-AUM-1130181 AeUmb.TA1851.r1.4UG0015510 [plastid stroma] R-AUM-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119430 Chorismate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0015600 R-AUM-5221151 AeUmb.TA1851.r1.4UG0015600 [cytosol] R-AUM-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-3899351 Abscisic acid (ABA) mediated signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0015860 R-AUM-1129922 AeUmb.TA1851.r1.4UG0015860 [plastid stroma] R-AUM-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119464 Methylerythritol phosphate pathway none Aegilops umbellulata AeUmb.TA1851.r1.4UG0015930 R-AUM-9608680 AeUmb.TA1851.r1.4UG0015930 [nucleoplasm] R-AUM-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9608575 Reproductive meristem phase change none Aegilops umbellulata AeUmb.TA1851.r1.4UG0015930 R-AUM-9608583 AeUmb.TA1851.r1.4UG0015930 [cytosol] R-AUM-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9608575 Reproductive meristem phase change none Aegilops umbellulata AeUmb.TA1851.r1.4UG0015990 R-AUM-8879029 DREB1G [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.4UG0016030 R-AUM-9826696 AeUmb.TA1851.r1.4UG0016030 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.4UG0016580 R-AUM-9826639 AeUmb.TA1851.r1.4UG0016580 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.4UG0016600 R-AUM-5138484 AeUmb.TA1851.r1.4UG0016600 [plastid stroma] R-AUM-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119263 Arginine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0016600 R-AUM-5138484 AeUmb.TA1851.r1.4UG0016600 [plastid stroma] R-AUM-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119539 Ornithine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0016600 R-AUM-5138484 AeUmb.TA1851.r1.4UG0016600 [plastid stroma] R-AUM-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119622 Arginine biosynthesis II (acetyl cycle) none Aegilops umbellulata AeUmb.TA1851.r1.4UG0017260 R-AUM-1126625-2 AeUmb.TA1851.r1.4UG0017260 [cytosol] R-AUM-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119334 Ethylene biosynthesis from methionine none Aegilops umbellulata AeUmb.TA1851.r1.4UG0017260 R-AUM-1126625-2 AeUmb.TA1851.r1.4UG0017260 [cytosol] R-AUM-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119501 S-adenosyl-L-methionine cycle none Aegilops umbellulata AeUmb.TA1851.r1.4UG0017260 R-AUM-1126625-2 AeUmb.TA1851.r1.4UG0017260 [cytosol] R-AUM-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119624 Methionine salvage pathway none Aegilops umbellulata AeUmb.TA1851.r1.4UG0017260 R-AUM-9025797-2 AeUmb.TA1851.r1.4UG0017260 [cytosol] R-AUM-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9025754 Mugineic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0017380 R-AUM-1125474 AeUmb.TA1851.r1.4UG0017380 [cytosol] R-AUM-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119437 Glutathione redox reactions I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0017620 R-AUM-9025447 AeUmb.TA1851.r1.4UG0017620 [cytosol] R-AUM-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119325 Sphingolipid metabolism none Aegilops umbellulata AeUmb.TA1851.r1.4UG0017680 R-AUM-1124032 AeUmb.TA1851.r1.4UG0017680 [cytosol] R-AUM-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119540 Leucine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0017780 R-AUM-1126053 AeUmb.TA1851.r1.4UG0017780 [mitochondrial matrix] R-AUM-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119479 Valine degradation none Aegilops umbellulata AeUmb.TA1851.r1.4UG0017980 R-AUM-9025772 AeUmb.TA1851.r1.4UG0017980 [plasma membrane] R-AUM-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9025727 Iron uptake and transport in root vascular system none Aegilops umbellulata AeUmb.TA1851.r1.4UG0017990 R-AUM-9025699 AeUmb.TA1851.r1.4UG0017990 [plasma membrane] R-AUM-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8858053 Polar auxin transport none Aegilops umbellulata AeUmb.TA1851.r1.4UG0018150 R-AUM-9826692 AeUmb.TA1851.r1.4UG0018150 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.4UG0018340 R-AUM-3321270 AeUmb.TA1851.r1.4UG0018340 [chloroplast inner membrane] R-AUM-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119287 Vitamin E biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0018720 R-AUM-1124490 AeUmb.TA1851.r1.4UG0018720 [cytosol] R-AUM-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119534 Pyridoxal 5'-phosphate salvage pathway none Aegilops umbellulata AeUmb.TA1851.r1.4UG0018720 R-AUM-1124490 AeUmb.TA1851.r1.4UG0018720 [cytosol] R-AUM-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119594 Pyridoxal 5'-phosphate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0018730 R-AUM-1125730-2 AeUmb.TA1851.r1.4UG0018730 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0018740 R-AUM-1127161 AeUmb.TA1851.r1.4UG0018740 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0018760 R-AUM-1125730 AeUmb.TA1851.r1.4UG0018760 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0019100 R-AUM-1124767 AeUmb.TA1851.r1.4UG0019100 [cytosol] R-AUM-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119261 Salicylate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0019100 R-AUM-1124767 AeUmb.TA1851.r1.4UG0019100 [cytosol] R-AUM-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119418 Suberin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0019100 R-AUM-1124767 AeUmb.TA1851.r1.4UG0019100 [cytosol] R-AUM-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops umbellulata AeUmb.TA1851.r1.4UG0019120 R-AUM-1125701-2 AeUmb.TA1851.r1.4UG0019120 [cytosol] R-AUM-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119261 Salicylate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0019120 R-AUM-1125701-2 AeUmb.TA1851.r1.4UG0019120 [cytosol] R-AUM-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119418 Suberin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0019120 R-AUM-1125701-2 AeUmb.TA1851.r1.4UG0019120 [cytosol] R-AUM-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops umbellulata AeUmb.TA1851.r1.4UG0019230 R-AUM-8933738 AeUmb.TA1851.r1.4UG0019230 [nucleoplasm] R-AUM-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8933811 Circadian rhythm none Aegilops umbellulata AeUmb.TA1851.r1.4UG0019260 R-AUM-8879002-3 AeUmb.TA1851.r1.4UG0019260 [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.4UG0019270 R-AUM-8879002-2 AeUmb.TA1851.r1.4UG0019270 [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.4UG0019280 R-AUM-8879002 AeUmb.TA1851.r1.4UG0019280 [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.4UG0019410 R-AUM-1129896 AeUmb.TA1851.r1.4UG0019410 [mitochondrial matrix] R-AUM-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119533 TCA cycle (plant) none Aegilops umbellulata AeUmb.TA1851.r1.4UG0019610 R-AUM-8933833 AeUmb.TA1851.r1.4UG0019610 [nucleoplasm] R-AUM-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8933811 Circadian rhythm none Aegilops umbellulata AeUmb.TA1851.r1.4UG0019610 R-AUM-8933833 AeUmb.TA1851.r1.4UG0019610 [nucleoplasm] R-AUM-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9928995 Drought escape (DE) via ABA-dependent pathway none Aegilops umbellulata AeUmb.TA1851.r1.4UG0019980 R-AUM-1128431 AeUmb.TA1851.r1.4UG0019980 [cytosol] R-AUM-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119316 Phenylpropanoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0020030 R-AUM-8934060 AeUmb.TA1851.r1.4UG0020030 [nucleoplasm] R-AUM-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934036 Long day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.4UG0020030 R-AUM-8934060 AeUmb.TA1851.r1.4UG0020030 [nucleoplasm] R-AUM-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934108 Short day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.4UG0020110 R-AUM-1124523 AeUmb.TA1851.r1.4UG0020110 [cytosol] R-AUM-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119460 Isoleucine biosynthesis from threonine none Aegilops umbellulata AeUmb.TA1851.r1.4UG0020110 R-AUM-1124523 AeUmb.TA1851.r1.4UG0020110 [cytosol] R-AUM-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119600 Valine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0020180 R-AUM-1126689 AeUmb.TA1851.r1.4UG0020180 [cytosol] R-AUM-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119353 Linear furanocoumarin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0020530 R-AUM-1124778-2 AeUmb.TA1851.r1.4UG0020530 [plastid stroma] R-AUM-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119464 Methylerythritol phosphate pathway none Aegilops umbellulata AeUmb.TA1851.r1.4UG0020550 R-AUM-1124778 AeUmb.TA1851.r1.4UG0020550 [plastid stroma] R-AUM-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119464 Methylerythritol phosphate pathway none Aegilops umbellulata AeUmb.TA1851.r1.4UG0020680 R-AUM-1126647 AeUmb.TA1851.r1.4UG0020680 [cytosol] R-AUM-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119273 Lysine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0020680 R-AUM-1126647 AeUmb.TA1851.r1.4UG0020680 [cytosol] R-AUM-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119283 Lysine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.4UG0020720 R-AUM-6787934 AeUmb.TA1851.r1.4UG0020720 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0021070 R-AUM-1126662 AeUmb.TA1851.r1.4UG0021070 [mitochondrial matrix] R-AUM-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119533 TCA cycle (plant) none Aegilops umbellulata AeUmb.TA1851.r1.4UG0021070 R-AUM-1126662 AeUmb.TA1851.r1.4UG0021070 [mitochondrial matrix] R-AUM-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119540 Leucine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0021470 R-AUM-1128950 AeUmb.TA1851.r1.4UG0021470 [cytosol] R-AUM-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119379 Flavin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0021710 R-AUM-8933710 AeUmb.TA1851.r1.4UG0021710 [nucleoplasm] R-AUM-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8933811 Circadian rhythm none Aegilops umbellulata AeUmb.TA1851.r1.4UG0021800 R-AUM-1128319 AeUmb.TA1851.r1.4UG0021800 [cytosol] R-AUM-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119341 Galactosylcyclitol biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0021900 R-AUM-9640739 AeUmb.TA1851.r1.4UG0021900 [nucleoplasm] R-AUM-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640887 G1/S transition none Aegilops umbellulata AeUmb.TA1851.r1.4UG0022150 R-AUM-1129851 AeUmb.TA1851.r1.4UG0022150 [mitochondrial matrix] R-AUM-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119533 TCA cycle (plant) none Aegilops umbellulata AeUmb.TA1851.r1.4UG0022150 R-AUM-1129851 AeUmb.TA1851.r1.4UG0022150 [mitochondrial matrix] R-AUM-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119540 Leucine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0022450 R-AUM-9675481 AeUmb.TA1851.r1.4UG0022450 [cytosol] R-AUM-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030654 Primary root development none Aegilops umbellulata AeUmb.TA1851.r1.4UG0022830 R-AUM-5655094 AeUmb.TA1851.r1.4UG0022830 [Golgi lumen] R-AUM-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5655101 Xyloglucan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0023260 R-AUM-5632264 AeUmb.TA1851.r1.4UG0023260 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0023310 R-AUM-5367743 AeUmb.TA1851.r1.4UG0023310 [cytosol] R-AUM-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5367729 Strigolactone biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0023380 R-AUM-8879050-3 CBF1 homolog [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.4UG0023650 R-AUM-6787113 AeUmb.TA1851.r1.4UG0023650 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0023870 R-AUM-6787185 AeUmb.TA1851.r1.4UG0023870 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0023890 R-AUM-9918179 AeUmb.TA1851.r1.4UG0023890 [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0023980 R-AUM-1129769 AeUmb.TA1851.r1.4UG0023980 [cytosol] R-AUM-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119332 Jasmonic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0023980 R-AUM-1129769 AeUmb.TA1851.r1.4UG0023980 [cytosol] R-AUM-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119618 13-LOX and 13-HPL pathway none Aegilops umbellulata AeUmb.TA1851.r1.4UG0024090 R-AUM-1126730 AeUmb.TA1851.r1.4UG0024090 [cytosol] R-AUM-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119389 Phenylalanine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0024090 R-AUM-1126730 AeUmb.TA1851.r1.4UG0024090 [cytosol] R-AUM-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119400 Methionine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.4UG0024090 R-AUM-1126730 AeUmb.TA1851.r1.4UG0024090 [cytosol] R-AUM-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119506 tyrosine degradation I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0024130 R-AUM-1129055 AeUmb.TA1851.r1.4UG0024130 [mitochondrial matrix] R-AUM-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119533 TCA cycle (plant) none Aegilops umbellulata AeUmb.TA1851.r1.4UG0024370 R-AUM-1125615 AeUmb.TA1851.r1.4UG0024370 [cytosol] R-AUM-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119334 Ethylene biosynthesis from methionine none Aegilops umbellulata AeUmb.TA1851.r1.4UG0024370 R-AUM-1125615 AeUmb.TA1851.r1.4UG0024370 [cytosol] R-AUM-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119501 S-adenosyl-L-methionine cycle none Aegilops umbellulata AeUmb.TA1851.r1.4UG0024370 R-AUM-1125615 AeUmb.TA1851.r1.4UG0024370 [cytosol] R-AUM-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119624 Methionine salvage pathway none Aegilops umbellulata AeUmb.TA1851.r1.4UG0024370 R-AUM-9025738 AeUmb.TA1851.r1.4UG0024370 [cytosol] R-AUM-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9025754 Mugineic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0024640 R-AUM-1122832 AeUmb.TA1851.r1.4UG0024640 [plastid stroma] R-AUM-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119449 Carotenoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0024870 R-AUM-1125967 AeUmb.TA1851.r1.4UG0024870 [cytosol] R-AUM-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119316 Phenylpropanoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0025650 R-AUM-1122849 AeUmb.TA1851.r1.4UG0025650 [mitochondrion] R-AUM-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119506 tyrosine degradation I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0025760 R-AUM-1124048 AeUmb.TA1851.r1.4UG0025760 [cytosol] R-AUM-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119610 Biotin biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.4UG0025800 R-AUM-4415060 AeUmb.TA1851.r1.4UG0025800 [plasma membrane] R-AUM-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-3899351 Abscisic acid (ABA) mediated signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0025800 R-AUM-4415065 phospho-AeUmb.TA1851.r1.4UG0025800 [plasma membrane] R-AUM-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-3899351 Abscisic acid (ABA) mediated signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0026060 R-AUM-5149657 AeUmb.TA1851.r1.4UG0026060 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.4UG0026060 R-AUM-1129239 AeUmb.TA1851.r1.4UG0026060 [cytosol] R-AUM-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119570 Cytosolic glycolysis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0026100 R-AUM-9025712-3 AeUmb.TA1851.r1.4UG0026100 [cytosol] R-AUM-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9025754 Mugineic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0026240 R-AUM-1125241 AeUmb.TA1851.r1.4UG0026240 [cytosol] R-AUM-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119273 Lysine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0026240 R-AUM-1125241 AeUmb.TA1851.r1.4UG0026240 [cytosol] R-AUM-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119283 Lysine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.4UG0026300 R-AUM-6787138 AeUmb.TA1851.r1.4UG0026300 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0026300 R-AUM-6787092 AeUmb.TA1851.r1.4UG0026300 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0026320 R-AUM-1125187 AeUmb.TA1851.r1.4UG0026320 [cytosol] R-AUM-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119276 Choline biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.4UG0026390 R-AUM-1129846 AeUmb.TA1851.r1.4UG0026390 [mitochondrion] R-AUM-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119337 Proline degradation none Aegilops umbellulata AeUmb.TA1851.r1.4UG0026390 R-AUM-1129846 AeUmb.TA1851.r1.4UG0026390 [mitochondrion] R-AUM-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119458 Glutamate degradation none Aegilops umbellulata AeUmb.TA1851.r1.4UG0026850 R-AUM-1122463-2 AeUmb.TA1851.r1.4UG0026850 [cytosol] R-AUM-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119321 Glycerol degradation I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0026870 R-AUM-1122463 AeUmb.TA1851.r1.4UG0026870 [cytosol] R-AUM-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119321 Glycerol degradation I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0027210 R-AUM-1130344 AeUmb.TA1851.r1.4UG0027210 [cytosol] R-AUM-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119389 Phenylalanine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0027260 R-AUM-1125275 AeUmb.TA1851.r1.4UG0027260 [cytosol] R-AUM-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119629 Thiamine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0027270 R-AUM-6787130 AeUmb.TA1851.r1.4UG0027270 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0027270 R-AUM-6787130 AeUmb.TA1851.r1.4UG0027270 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.4UG0027500 R-AUM-1125090 AeUmb.TA1851.r1.4UG0027500 [cytosol] R-AUM-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119465 Sucrose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0027620 R-AUM-4827041 AeUmb.TA1851.r1.4UG0027620 [plastid stroma] R-AUM-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-4827054 Tetrapyrrole biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0027790 R-AUM-1128974-2 AeUmb.TA1851.r1.4UG0027790 [cytosol] R-AUM-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119287 Vitamin E biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0027790 R-AUM-1128974-2 AeUmb.TA1851.r1.4UG0027790 [cytosol] R-AUM-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119506 tyrosine degradation I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0027850 R-AUM-1127799 AeUmb.TA1851.r1.4UG0027850 [cytosol] R-AUM-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119342 Gamma-glutamyl cycle none Aegilops umbellulata AeUmb.TA1851.r1.4UG0027850 R-AUM-1127799 AeUmb.TA1851.r1.4UG0027850 [cytosol] R-AUM-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119483 Glutathione biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0028800 R-AUM-6787213 AeUmb.TA1851.r1.4UG0028800 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0029180 R-AUM-9930276 AeUmb.TA1851.r1.4UG0029180 [nucleoplasm] R-AUM-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9766881 TF network involved in salinity response none Aegilops umbellulata AeUmb.TA1851.r1.4UG0029220 R-AUM-9924413 WOX6 [nucleoplasm] R-AUM-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops umbellulata AeUmb.TA1851.r1.4UG0029280 R-AUM-6787084 AeUmb.TA1851.r1.4UG0029280 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0029450 R-AUM-9826700 AeUmb.TA1851.r1.4UG0029450 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.4UG0029550 R-AUM-6786916 AeUmb.TA1851.r1.4UG0029550 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0029550 R-AUM-6787027 AeUmb.TA1851.r1.4UG0029550 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0029640 R-AUM-6788172 AeUmb.TA1851.r1.4UG0029640 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0029750 R-AUM-9031290 AeUmb.TA1851.r1.4UG0029750 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.4UG0030010 R-AUM-8933856 AeUmb.TA1851.r1.4UG0030010 [nucleoplasm] R-AUM-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8933811 Circadian rhythm none Aegilops umbellulata AeUmb.TA1851.r1.4UG0030010 R-AUM-8933748 AeUmb.TA1851.r1.4UG0030010 [cytosol] R-AUM-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8933811 Circadian rhythm none Aegilops umbellulata AeUmb.TA1851.r1.4UG0030010 R-AUM-8933856 AeUmb.TA1851.r1.4UG0030010 [nucleoplasm] R-AUM-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934036 Long day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.4UG0030010 R-AUM-8933856 AeUmb.TA1851.r1.4UG0030010 [nucleoplasm] R-AUM-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9928995 Drought escape (DE) via ABA-dependent pathway none Aegilops umbellulata AeUmb.TA1851.r1.4UG0030160 R-AUM-9025712 AeUmb.TA1851.r1.4UG0030160 [cytosol] R-AUM-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9025754 Mugineic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0030240 R-AUM-5655092 AeUmb.TA1851.r1.4UG0030240 [Golgi lumen] R-AUM-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5655101 Xyloglucan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0030260 R-AUM-5655071 AeUmb.TA1851.r1.4UG0030260 [Golgi lumen] R-AUM-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5655101 Xyloglucan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0030290 R-AUM-9675331 AeUmb.TA1851.r1.4UG0030290 [plastid] R-AUM-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030654 Primary root development none Aegilops umbellulata AeUmb.TA1851.r1.4UG0030570 R-AUM-9639810 AeUmb.TA1851.r1.4UG0030570 [cell wall] R-AUM-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9639861 Development of root hair none Aegilops umbellulata AeUmb.TA1851.r1.4UG0030580 R-AUM-5606478-2 AeUmb.TA1851.r1.4UG0030580 [plastid stroma] R-AUM-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119419 Lysine biosynthesis VI none Aegilops umbellulata AeUmb.TA1851.r1.4UG0031000 R-AUM-9025294 AeUmb.TA1851.r1.4UG0031000 [cytosol] R-AUM-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119267 Phenylalanine degradation III none Aegilops umbellulata AeUmb.TA1851.r1.4UG0031000 R-AUM-1123342 AeUmb.TA1851.r1.4UG0031000 [cytosol] R-AUM-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119460 Isoleucine biosynthesis from threonine none Aegilops umbellulata AeUmb.TA1851.r1.4UG0031000 R-AUM-1123342 AeUmb.TA1851.r1.4UG0031000 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0031000 R-AUM-1123342 AeUmb.TA1851.r1.4UG0031000 [cytosol] R-AUM-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119600 Valine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0031050 R-AUM-1128279 AeUmb.TA1851.r1.4UG0031050 [cytosol] R-AUM-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119354 Asparagine biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.4UG0031050 R-AUM-1128279 AeUmb.TA1851.r1.4UG0031050 [cytosol] R-AUM-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119553 Asparagine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0031110 R-AUM-1129351 AeUmb.TA1851.r1.4UG0031110 [cytosol] R-AUM-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119300 Glycolipid desaturation none Aegilops umbellulata AeUmb.TA1851.r1.4UG0031360 R-AUM-1126138 AeUmb.TA1851.r1.4UG0031360 [cytosol] R-AUM-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119389 Phenylalanine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0031380 R-AUM-9675423 AeUmb.TA1851.r1.4UG0031380 [nucleoplasm] R-AUM-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675508 Root elongation none Aegilops umbellulata AeUmb.TA1851.r1.4UG0031380 R-AUM-9930290 MPK5 [nucleoplasm] R-AUM-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9766881 TF network involved in salinity response none Aegilops umbellulata AeUmb.TA1851.r1.4UG0031390 R-AUM-1127140 AeUmb.TA1851.r1.4UG0031390 [cytosol] R-AUM-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119403 Removal of superoxide radicals none Aegilops umbellulata AeUmb.TA1851.r1.4UG0031540 R-AUM-9025230 AeUmb.TA1851.r1.4UG0031540 [peroxisomal matrix] R-AUM-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119407 Ureide biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0031560 R-AUM-1130032 AeUmb.TA1851.r1.4UG0031560 [mitochondrial inner membrane] R-AUM-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119260 Cardiolipin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0032010 R-AUM-9658613 AeUmb.TA1851.r1.4UG0032010 [plastid stroma] R-AUM-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119263 Arginine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0032010 R-AUM-9658613 AeUmb.TA1851.r1.4UG0032010 [plastid stroma] R-AUM-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119622 Arginine biosynthesis II (acetyl cycle) none Aegilops umbellulata AeUmb.TA1851.r1.4UG0032130 R-AUM-1125259 AeUmb.TA1851.r1.4UG0032130 [cytosol] R-AUM-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119428 GDP-D-rhamnose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0032130 R-AUM-1125259 AeUmb.TA1851.r1.4UG0032130 [cytosol] R-AUM-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops umbellulata AeUmb.TA1851.r1.4UG0032140 R-AUM-1126799 AeUmb.TA1851.r1.4UG0032140 [cytosol] R-AUM-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119428 GDP-D-rhamnose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0032140 R-AUM-1126799 AeUmb.TA1851.r1.4UG0032140 [cytosol] R-AUM-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119563 UDP-D-xylose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0032140 R-AUM-1126799 AeUmb.TA1851.r1.4UG0032140 [cytosol] R-AUM-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops umbellulata AeUmb.TA1851.r1.4UG0032670 R-AUM-4415078 AeUmb.TA1851.r1.4UG0032670 [cytosol] R-AUM-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-3899351 Abscisic acid (ABA) mediated signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0032680 R-AUM-1123261 AeUmb.TA1851.r1.4UG0032680 [cytosol] R-AUM-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119410 Ascorbate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0032770 R-AUM-1127082 AeUmb.TA1851.r1.4UG0032770 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.4UG0032970 R-AUM-6787198 AeUmb.TA1851.r1.4UG0032970 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0033110 R-AUM-1123998 AeUmb.TA1851.r1.4UG0033110 [chloroplast] R-AUM-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119494 Tryptophan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0033130 R-AUM-9025430 AeUmb.TA1851.r1.4UG0033130 [endoplasmic reticulum membrane] R-AUM-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119325 Sphingolipid metabolism none Aegilops umbellulata AeUmb.TA1851.r1.4UG0033170 R-AUM-1125989 AeUmb.TA1851.r1.4UG0033170 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0033250 R-AUM-9626449 AeUmb.TA1851.r1.4UG0033250 [cytosol] R-AUM-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9626305 Regulatory network of nutrient accumulation none Aegilops umbellulata AeUmb.TA1851.r1.4UG0033720 R-AUM-1130456 AeUmb.TA1851.r1.4UG0033720 [plastid stroma] R-AUM-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119430 Chorismate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0033730 R-AUM-5632157 AeUmb.TA1851.r1.4UG0033730 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0033730 R-AUM-5632157 AeUmb.TA1851.r1.4UG0033730 [nucleoplasm] R-AUM-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5654828 Strigolactone signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0033860 R-AUM-9025453 AeUmb.TA1851.r1.4UG0033860 [endoplasmic reticulum membrane] R-AUM-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119325 Sphingolipid metabolism none Aegilops umbellulata AeUmb.TA1851.r1.4UG0034000 R-AUM-1126421 AeUmb.TA1851.r1.4UG0034000 [cytosol] R-AUM-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119428 GDP-D-rhamnose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0034000 R-AUM-1126421 AeUmb.TA1851.r1.4UG0034000 [cytosol] R-AUM-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops umbellulata AeUmb.TA1851.r1.4UG0034260 R-AUM-1125870 AeUmb.TA1851.r1.4UG0034260 [cytosol] R-AUM-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119273 Lysine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0034260 R-AUM-1125870 AeUmb.TA1851.r1.4UG0034260 [cytosol] R-AUM-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119283 Lysine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.4UG0034260 R-AUM-5606480 AeUmb.TA1851.r1.4UG0034260 [plastid stroma] R-AUM-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119419 Lysine biosynthesis VI none Aegilops umbellulata AeUmb.TA1851.r1.4UG0034830 R-AUM-1125051-2 AeUmb.TA1851.r1.4UG0034830 [cytosol] R-AUM-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119458 Glutamate degradation none Aegilops umbellulata AeUmb.TA1851.r1.4UG0034920 R-AUM-1122726-2 AeUmb.TA1851.r1.4UG0034920 [cytosol] R-AUM-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119265 Tetrahydrofolate biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0034920 R-AUM-1122726-2 AeUmb.TA1851.r1.4UG0034920 [cytosol] R-AUM-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119523 Tetrahydrofolate biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.4UG0034930 R-AUM-1122726 AeUmb.TA1851.r1.4UG0034930 [cytosol] R-AUM-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119265 Tetrahydrofolate biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0034930 R-AUM-1122726 AeUmb.TA1851.r1.4UG0034930 [cytosol] R-AUM-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119523 Tetrahydrofolate biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.4UG0035210 R-AUM-9639049 AeUmb.TA1851.r1.4UG0035210 [cytosol] R-AUM-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119434 Phytic acid biosynthesis (lipid-independent) none Aegilops umbellulata AeUmb.TA1851.r1.4UG0035230 R-AUM-1122974 AeUmb.TA1851.r1.4UG0035230 [mitochondrial matrix] R-AUM-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119479 Valine degradation none Aegilops umbellulata AeUmb.TA1851.r1.4UG0035470 R-AUM-1125556 AeUmb.TA1851.r1.4UG0035470 [cytosol] R-AUM-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119410 Ascorbate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0035470 R-AUM-1125556 AeUmb.TA1851.r1.4UG0035470 [cytosol] R-AUM-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119628 GDP-mannose metabolism none Aegilops umbellulata AeUmb.TA1851.r1.4UG0035510 R-AUM-1128804 AeUmb.TA1851.r1.4UG0035510 [cytosol] R-AUM-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119516 Trehalose biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0035730 R-AUM-1129111 AeUmb.TA1851.r1.4UG0035730 [cytosol] R-AUM-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119349 S-methylmethionine cycle none Aegilops umbellulata AeUmb.TA1851.r1.4UG0035730 R-AUM-1129111 AeUmb.TA1851.r1.4UG0035730 [cytosol] R-AUM-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119400 Methionine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.4UG0036150 R-AUM-9645944 AeUmb.TA1851.r1.4UG0036150 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.4UG0037220 R-AUM-5654859 AeUmb.TA1851.r1.4UG0037220 [nucleoplasm] R-AUM-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5654828 Strigolactone signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0037220 R-AUM-5654859 AeUmb.TA1851.r1.4UG0037220 [nucleoplasm] R-AUM-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Aegilops umbellulata AeUmb.TA1851.r1.4UG0037560 R-AUM-9826620 HOX12/ OsGT1 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.4UG0037560 R-AUM-9826620 HOX12/ OsGT1 [nucleoplasm] R-AUM-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Aegilops umbellulata AeUmb.TA1851.r1.4UG0037730 R-AUM-1127723 AeUmb.TA1851.r1.4UG0037730 [cytosol] R-AUM-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119331 Cysteine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0037820 R-AUM-5606521 AeUmb.TA1851.r1.4UG0037820 [plastid stroma] R-AUM-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119419 Lysine biosynthesis VI none Aegilops umbellulata AeUmb.TA1851.r1.4UG0038050 R-AUM-1129964 AeUmb.TA1851.r1.4UG0038050 [cytosol] R-AUM-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119378 Myo-inositol biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0038050 R-AUM-1129964 AeUmb.TA1851.r1.4UG0038050 [cytosol] R-AUM-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119434 Phytic acid biosynthesis (lipid-independent) none Aegilops umbellulata AeUmb.TA1851.r1.4UG0038430 R-AUM-9916247-3 OsEXPA19 [extracellular region] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.4UG0038430 R-AUM-9916296-3 OsEXPA20 [extracellular region] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.4UG0038530 R-AUM-9916247 OsEXPA19 [extracellular region] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.4UG0038530 R-AUM-9916296 OsEXPA20 [extracellular region] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.4UG0038540 R-AUM-9916247-4 OsEXPA19 [extracellular region] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.4UG0038540 R-AUM-9916296-2 OsEXPA20 [extracellular region] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.4UG0039030 R-AUM-9924379 HSFA2D [nucleoplasm] R-AUM-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops umbellulata AeUmb.TA1851.r1.4UG0039490 R-AUM-9658656 AeUmb.TA1851.r1.4UG0039490 [cytosol] R-AUM-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119271 Threonine degradation none Aegilops umbellulata AeUmb.TA1851.r1.4UG0039490 R-AUM-9658656 AeUmb.TA1851.r1.4UG0039490 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0039490 R-AUM-9658656 AeUmb.TA1851.r1.4UG0039490 [cytosol] R-AUM-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119567 Beta-alanine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0039510 R-AUM-8986767 AeUmb.TA1851.r1.4UG0039510 [plastid] R-AUM-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8986768 Anther and pollen development none Aegilops umbellulata AeUmb.TA1851.r1.4UG0039520 R-AUM-5632205 AeUmb.TA1851.r1.4UG0039520 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0039680 R-AUM-1122934 AeUmb.TA1851.r1.4UG0039680 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.4UG0039800 R-AUM-9025329 AeUmb.TA1851.r1.4UG0039800 [chloroplast stroma] R-AUM-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119402 Phospholipid biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0039800 R-AUM-1125388 AeUmb.TA1851.r1.4UG0039800 [cytosol] R-AUM-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119496 Pantothenate biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0039800 R-AUM-1125388 AeUmb.TA1851.r1.4UG0039800 [cytosol] R-AUM-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119544 Pantothenate biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.4UG0040580 R-AUM-1123433 AeUmb.TA1851.r1.4UG0040580 [cytosol] R-AUM-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119332 Jasmonic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0040580 R-AUM-1123433 AeUmb.TA1851.r1.4UG0040580 [cytosol] R-AUM-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119618 13-LOX and 13-HPL pathway none Aegilops umbellulata AeUmb.TA1851.r1.4UG0040690 R-AUM-6786958 AeUmb.TA1851.r1.4UG0040690 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0040690 R-AUM-6787234 AeUmb.TA1851.r1.4UG0040690 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0040700 R-AUM-6787180 AeUmb.TA1851.r1.4UG0040700 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0040700 R-AUM-6787152 AeUmb.TA1851.r1.4UG0040700 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0040730 R-AUM-5683263 AeUmb.TA1851.r1.4UG0040730 [cytosol] R-AUM-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119586 Cyanate degradation none Aegilops umbellulata AeUmb.TA1851.r1.4UG0041080 R-AUM-5654911 AeUmb.TA1851.r1.4UG0041080 [Golgi lumen] R-AUM-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5654909 Xylan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0041120 R-AUM-9640701 AeUmb.TA1851.r1.4UG0041120 [nucleoplasm] R-AUM-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640882 Assembly of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.4UG0041120 R-AUM-9640701 AeUmb.TA1851.r1.4UG0041120 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.4UG0041200 R-AUM-4827040 AeUmb.TA1851.r1.4UG0041200 [plastid stroma] R-AUM-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-4827054 Tetrapyrrole biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0041310 R-AUM-5608140 AeUmb.TA1851.r1.4UG0041310 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0041380 R-AUM-9826680 AeUmb.TA1851.r1.4UG0041380 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.4UG0041530 R-AUM-1122295 AeUmb.TA1851.r1.4UG0041530 [cytosol] R-AUM-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119353 Linear furanocoumarin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0041540 R-AUM-1122295-2 AeUmb.TA1851.r1.4UG0041540 [cytosol] R-AUM-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119353 Linear furanocoumarin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0041830 R-AUM-5655057 AeUmb.TA1851.r1.4UG0041830 [Golgi lumen] R-AUM-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5655101 Xyloglucan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0042280 R-AUM-9639211-2 AeUmb.TA1851.r1.4UG0042280 [plant-type vacuole membrane] R-AUM-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9639136 Response to Aluminum stress none Aegilops umbellulata AeUmb.TA1851.r1.4UG0042530 R-AUM-1124065 AeUmb.TA1851.r1.4UG0042530 [cytosol] R-AUM-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0042600 R-AUM-1125051 AeUmb.TA1851.r1.4UG0042600 [cytosol] R-AUM-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119458 Glutamate degradation none Aegilops umbellulata AeUmb.TA1851.r1.4UG0043350 R-AUM-1129507 AeUmb.TA1851.r1.4UG0043350 [cytosol] R-AUM-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119452 Galactose degradation II none Aegilops umbellulata AeUmb.TA1851.r1.4UG0043510 R-AUM-9031256-2 AeUmb.TA1851.r1.4UG0043510 [endoplasmic reticulum lumen] R-AUM-9031225 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9031225 Response to phosphate deficiency none Aegilops umbellulata AeUmb.TA1851.r1.4UG0043510 R-AUM-9031289-2 AeUmb.TA1851.r1.4UG0043510 [plasma membrane] R-AUM-9031225 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9031225 Response to phosphate deficiency none Aegilops umbellulata AeUmb.TA1851.r1.4UG0043510 R-AUM-9031289-2 AeUmb.TA1851.r1.4UG0043510 [plasma membrane] R-AUM-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9618218 Arsenic uptake and detoxification none Aegilops umbellulata AeUmb.TA1851.r1.4UG0043520 R-AUM-9031256 AeUmb.TA1851.r1.4UG0043520 [endoplasmic reticulum lumen] R-AUM-9031225 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9031225 Response to phosphate deficiency none Aegilops umbellulata AeUmb.TA1851.r1.4UG0043520 R-AUM-9031289 AeUmb.TA1851.r1.4UG0043520 [plasma membrane] R-AUM-9031225 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9031225 Response to phosphate deficiency none Aegilops umbellulata AeUmb.TA1851.r1.4UG0043520 R-AUM-9031289 AeUmb.TA1851.r1.4UG0043520 [plasma membrane] R-AUM-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9618218 Arsenic uptake and detoxification none Aegilops umbellulata AeUmb.TA1851.r1.4UG0043770 R-AUM-9626474 AeUmb.TA1851.r1.4UG0043770 [trans-Golgi network membrane] R-AUM-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9626305 Regulatory network of nutrient accumulation none Aegilops umbellulata AeUmb.TA1851.r1.4UG0043860 R-AUM-2685731 AeUmb.TA1851.r1.4UG0043860 [cytosol] R-AUM-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119580 IAA biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.4UG0044710 R-AUM-9916247-2 OsEXPA19 [extracellular region] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.4UG0044710 R-AUM-9916296-4 OsEXPA20 [extracellular region] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.4UG0044780 R-AUM-9609608-3 AeUmb.TA1851.r1.4UG0044780 [cytosol] R-AUM-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9609573 Tricin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0044780 R-AUM-9916171-3 OsOMT [cytosol] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.4UG0044780 R-AUM-9916312-3 OsOMT [nucleoplasm] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.4UG0045020 R-AUM-5632129 AeUmb.TA1851.r1.4UG0045020 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.4UG0045260 R-AUM-1126714 AeUmb.TA1851.r1.4UG0045260 [cytosol] R-AUM-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119273 Lysine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.4UG0045260 R-AUM-1126714 AeUmb.TA1851.r1.4UG0045260 [cytosol] R-AUM-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119283 Lysine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.4UG0045260 R-AUM-1126714 AeUmb.TA1851.r1.4UG0045260 [cytosol] R-AUM-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119295 Homoserine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.4UG0045260 R-AUM-5606484 AeUmb.TA1851.r1.4UG0045260 [plastid stroma] R-AUM-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119419 Lysine biosynthesis VI none Aegilops umbellulata AeUmb.TA1851.r1.5UG0000270 R-AUM-9626337 AeUmb.TA1851.r1.5UG0000270 [Golgi-associated vesicle] R-AUM-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9626305 Regulatory network of nutrient accumulation none Aegilops umbellulata AeUmb.TA1851.r1.5UG0000430 R-AUM-8879061 LOS2 homolog [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.5UG0000450 R-AUM-8879061-2 LOS2 homolog [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.5UG0001110 R-AUM-1126971-2 AeUmb.TA1851.r1.5UG0001110 [cytosol] R-AUM-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119332 Jasmonic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0001110 R-AUM-1126971-2 AeUmb.TA1851.r1.5UG0001110 [cytosol] R-AUM-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119618 13-LOX and 13-HPL pathway none Aegilops umbellulata AeUmb.TA1851.r1.5UG0001370 R-AUM-1126636-4 AeUmb.TA1851.r1.5UG0001370 [cytosol] R-AUM-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119370 Sterol biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0001410 R-AUM-1126636-2 AeUmb.TA1851.r1.5UG0001410 [cytosol] R-AUM-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119370 Sterol biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0001420 R-AUM-1126636-3 AeUmb.TA1851.r1.5UG0001420 [cytosol] R-AUM-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119370 Sterol biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0001660 R-AUM-1127089 AeUmb.TA1851.r1.5UG0001660 [cytosol] R-AUM-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119465 Sucrose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0001690 R-AUM-9609343-2 AeUmb.TA1851.r1.5UG0001690 [cytosol] R-AUM-9609352 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9609352 Lycopene catabolism none Aegilops umbellulata AeUmb.TA1851.r1.5UG0001760 R-AUM-9609343 AeUmb.TA1851.r1.5UG0001760 [cytosol] R-AUM-9609352 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9609352 Lycopene catabolism none Aegilops umbellulata AeUmb.TA1851.r1.5UG0002150 R-AUM-9025508 AeUmb.TA1851.r1.5UG0002150 [endoplasmic reticulum membrane] R-AUM-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119325 Sphingolipid metabolism none Aegilops umbellulata AeUmb.TA1851.r1.5UG0002400 R-AUM-1127031 AeUmb.TA1851.r1.5UG0002400 [cytosol] R-AUM-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119460 Isoleucine biosynthesis from threonine none Aegilops umbellulata AeUmb.TA1851.r1.5UG0002440 R-AUM-1122632 AeUmb.TA1851.r1.5UG0002440 [cytosol] R-AUM-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119331 Cysteine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0002450 R-AUM-1122632-2 AeUmb.TA1851.r1.5UG0002450 [cytosol] R-AUM-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119331 Cysteine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0002660 R-AUM-1127065 AeUmb.TA1851.r1.5UG0002660 [cytosol] R-AUM-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119304 Putrescine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.5UG0002690 R-AUM-1125151 AeUmb.TA1851.r1.5UG0002690 [cytosol] R-AUM-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119400 Methionine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.5UG0002690 R-AUM-1125151 AeUmb.TA1851.r1.5UG0002690 [cytosol] R-AUM-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119501 S-adenosyl-L-methionine cycle none Aegilops umbellulata AeUmb.TA1851.r1.5UG0002900 R-AUM-9826669 OsYABBY6 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.5UG0003000 R-AUM-1128131 AeUmb.TA1851.r1.5UG0003000 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0003360 R-AUM-5632111 AeUmb.TA1851.r1.5UG0003360 [cytosol] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0003360 R-AUM-5632216 phospho-AeUmb.TA1851.r1.5UG0003360 [cytosol] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0003360 R-AUM-5632145 phospho-AeUmb.TA1851.r1.5UG0003360 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0003400 R-AUM-5221146 AeUmb.TA1851.r1.5UG0003400 [plastid] R-AUM-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119374 Abscisic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0003560 R-AUM-9826635 PCF8 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.5UG0003640 R-AUM-1126971-3 AeUmb.TA1851.r1.5UG0003640 [cytosol] R-AUM-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119332 Jasmonic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0003640 R-AUM-1126971-3 AeUmb.TA1851.r1.5UG0003640 [cytosol] R-AUM-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119618 13-LOX and 13-HPL pathway none Aegilops umbellulata AeUmb.TA1851.r1.5UG0004000 R-AUM-5655007 AeUmb.TA1851.r1.5UG0004000 [Golgi lumen] R-AUM-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5655010 Xylogalacturonan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0004110 R-AUM-1124232 AeUmb.TA1851.r1.5UG0004110 [cytosol] R-AUM-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119341 Galactosylcyclitol biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0005390 R-AUM-5632280 AeUmb.TA1851.r1.5UG0005390 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0005390 R-AUM-5632280 AeUmb.TA1851.r1.5UG0005390 [nucleoplasm] R-AUM-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5679411 Gibberellin signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0005700 R-AUM-1123255 AeUmb.TA1851.r1.5UG0005700 [cytosol] R-AUM-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119506 tyrosine degradation I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0005780 R-AUM-1127274 AeUmb.TA1851.r1.5UG0005780 [cytosol] R-AUM-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119612 Cysteine degradation none Aegilops umbellulata AeUmb.TA1851.r1.5UG0005880 R-AUM-1128594 AeUmb.TA1851.r1.5UG0005880 [cytosol] R-AUM-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119349 S-methylmethionine cycle none Aegilops umbellulata AeUmb.TA1851.r1.5UG0005880 R-AUM-1128594 AeUmb.TA1851.r1.5UG0005880 [cytosol] R-AUM-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119400 Methionine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.5UG0006320 R-AUM-9682527 AeUmb.TA1851.r1.5UG0006320 [cytosol] R-AUM-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119410 Ascorbate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0006500 R-AUM-1129784 AeUmb.TA1851.r1.5UG0006500 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0006540 R-AUM-1125540 AeUmb.TA1851.r1.5UG0006540 [cytosol] R-AUM-1119303 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119303 Pyridoxamine anabolism none Aegilops umbellulata AeUmb.TA1851.r1.5UG0006540 R-AUM-1125540 AeUmb.TA1851.r1.5UG0006540 [cytosol] R-AUM-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119534 Pyridoxal 5'-phosphate salvage pathway none Aegilops umbellulata AeUmb.TA1851.r1.5UG0006670 R-AUM-9658563 AeUmb.TA1851.r1.5UG0006670 [endoplasmic reticulum lumen] R-AUM-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119502 Allantoin degradation none Aegilops umbellulata AeUmb.TA1851.r1.5UG0007760 R-AUM-4415007 AeUmb.TA1851.r1.5UG0007760 [cytosol] R-AUM-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-3899351 Abscisic acid (ABA) mediated signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0007760 R-AUM-4415016 phospho-AeUmb.TA1851.r1.5UG0007760 [cytosol] R-AUM-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-3899351 Abscisic acid (ABA) mediated signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0007830 R-AUM-8879027 AeUmb.TA1851.r1.5UG0007830 [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.5UG0009040 R-AUM-9611544 SPL11 [nucleoplasm] R-AUM-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops umbellulata AeUmb.TA1851.r1.5UG0009040 R-AUM-9611440 phospho-phosphorylated-SPL11 [nucleoplasm] R-AUM-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops umbellulata AeUmb.TA1851.r1.5UG0009760 R-AUM-9640745 AeUmb.TA1851.r1.5UG0009760 [nucleoplasm] R-AUM-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640882 Assembly of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.5UG0009760 R-AUM-9640745 AeUmb.TA1851.r1.5UG0009760 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.5UG0009760 R-AUM-9640745 AeUmb.TA1851.r1.5UG0009760 [nucleoplasm] R-AUM-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675824 DNA replication Initiation none Aegilops umbellulata AeUmb.TA1851.r1.5UG0009940 R-AUM-1123894 AeUmb.TA1851.r1.5UG0009940 [plasma membrane] R-AUM-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119314 Cellulose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0010230 R-AUM-9607149 AeUmb.TA1851.r1.5UG0010230 [plasma membrane] R-AUM-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9607185 Generation of superoxide radicals none Aegilops umbellulata AeUmb.TA1851.r1.5UG0010230 R-AUM-9607094 phospho-AeUmb.TA1851.r1.5UG0010230 [plasma membrane] R-AUM-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9607185 Generation of superoxide radicals none Aegilops umbellulata AeUmb.TA1851.r1.5UG0010570 R-AUM-9920304 AeUmb.TA1851.r1.5UG0010570 [nucleoplasm] R-AUM-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934108 Short day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.5UG0010690 R-AUM-5608090 AeUmb.TA1851.r1.5UG0010690 [plasma membrane] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0010690 R-AUM-5608190 AeUmb.TA1851.r1.5UG0010690 [cytosol] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0010730 R-AUM-1129924 AeUmb.TA1851.r1.5UG0010730 [cytosol] R-AUM-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119342 Gamma-glutamyl cycle none Aegilops umbellulata AeUmb.TA1851.r1.5UG0010730 R-AUM-1129924 AeUmb.TA1851.r1.5UG0010730 [cytosol] R-AUM-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119483 Glutathione biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0010800 R-AUM-9618056 AeUmb.TA1851.r1.5UG0010800 [plasma membrane] R-AUM-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9618218 Arsenic uptake and detoxification none Aegilops umbellulata AeUmb.TA1851.r1.5UG0010810 R-AUM-9918201 AeUmb.TA1851.r1.5UG0010810 [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0010850 R-AUM-2685738 AeUmb.TA1851.r1.5UG0010850 [cytosol] R-AUM-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119580 IAA biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.5UG0010890 R-AUM-1130036 AeUmb.TA1851.r1.5UG0010890 [endoplasmic reticulum membrane] R-AUM-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119402 Phospholipid biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0010920 R-AUM-9916125 AeUmb.TA1851.r1.5UG0010920 [nucleoplasm] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.5UG0010920 R-AUM-9916231 AeUmb.TA1851.r1.5UG0010920 [cytosol] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.5UG0010920 R-AUM-9916199 phospho-AeUmb.TA1851.r1.5UG0010920 [cytosol] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.5UG0011340 R-AUM-1127151 AeUmb.TA1851.r1.5UG0011340 [cytosol] R-AUM-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119384 NAD biosynthesis I (from aspartate) none Aegilops umbellulata AeUmb.TA1851.r1.5UG0012340 R-AUM-9611889 AeUmb.TA1851.r1.5UG0012340 [mitochondrial matrix] R-AUM-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119479 Valine degradation none Aegilops umbellulata AeUmb.TA1851.r1.5UG0012430 R-AUM-1128906 AeUmb.TA1851.r1.5UG0012430 [cytosol] R-AUM-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119444 Canavanine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0012650 R-AUM-9675877 AeUmb.TA1851.r1.5UG0012650 [nucleoplasm] R-AUM-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675815 Leading strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0012770 R-AUM-1125550 AeUmb.TA1851.r1.5UG0012770 [cytosol] R-AUM-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119623 Acyl-CoA synthetase pathway none Aegilops umbellulata AeUmb.TA1851.r1.5UG0012930 R-AUM-1126741 AeUmb.TA1851.r1.5UG0012930 [plastid] R-AUM-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119407 Ureide biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0013410 R-AUM-9640722 AeUmb.TA1851.r1.5UG0013410 [nucleoplasm] R-AUM-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640887 G1/S transition none Aegilops umbellulata AeUmb.TA1851.r1.5UG0013800 R-AUM-9608694 AeUmb.TA1851.r1.5UG0013800 [cytosol] R-AUM-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9928831 Severe drought none Aegilops umbellulata AeUmb.TA1851.r1.5UG0013800 R-AUM-9928774 AeUmb.TA1851.r1.5UG0013800 [nucleoplasm] R-AUM-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9928831 Severe drought none Aegilops umbellulata AeUmb.TA1851.r1.5UG0013920 R-AUM-5655070 AeUmb.TA1851.r1.5UG0013920 [Golgi lumen] R-AUM-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5655101 Xyloglucan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0014030 R-AUM-1122881-2 AeUmb.TA1851.r1.5UG0014030 [cytosol] R-AUM-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0014030 R-AUM-1122881-2 AeUmb.TA1851.r1.5UG0014030 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0014030 R-AUM-1122881-2 AeUmb.TA1851.r1.5UG0014030 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0014210 R-AUM-1129809 AeUmb.TA1851.r1.5UG0014210 [mitochondrial inner membrane] R-AUM-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119410 Ascorbate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0014330 R-AUM-1127173 AeUmb.TA1851.r1.5UG0014330 [cytosol] R-AUM-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119540 Leucine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0014340 R-AUM-1122326 AeUmb.TA1851.r1.5UG0014340 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0014350 R-AUM-9826645 NH5 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.5UG0014500 R-AUM-1123943 AeUmb.TA1851.r1.5UG0014500 [plastid] R-AUM-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119365 Lysine degradation II none Aegilops umbellulata AeUmb.TA1851.r1.5UG0014550 R-AUM-9681911 AeUmb.TA1851.r1.5UG0014550 [Golgi membrane] R-AUM-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops umbellulata AeUmb.TA1851.r1.5UG0014700 R-AUM-9025819 AeUmb.TA1851.r1.5UG0014700 [plasma membrane] R-AUM-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9025727 Iron uptake and transport in root vascular system none Aegilops umbellulata AeUmb.TA1851.r1.5UG0014740 R-AUM-1125839 AeUmb.TA1851.r1.5UG0014740 [cytosol] R-AUM-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119386 UDP-N-acetylgalactosamine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0015070 R-AUM-1126387-2 AeUmb.TA1851.r1.5UG0015070 [cytosol] R-AUM-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119295 Homoserine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0015080 R-AUM-1126387 AeUmb.TA1851.r1.5UG0015080 [cytosol] R-AUM-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119295 Homoserine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0015110 R-AUM-9645907-2 AeUmb.TA1851.r1.5UG0015110 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.5UG0015110 R-AUM-9645907-2 AeUmb.TA1851.r1.5UG0015110 [nucleoplasm] R-AUM-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675824 DNA replication Initiation none Aegilops umbellulata AeUmb.TA1851.r1.5UG0015180 R-AUM-9826671 NAC77 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.5UG0016360 R-AUM-1125804 AeUmb.TA1851.r1.5UG0016360 [cytosol] R-AUM-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119300 Glycolipid desaturation none Aegilops umbellulata AeUmb.TA1851.r1.5UG0016380 R-AUM-5654797-2 AeUmb.TA1851.r1.5UG0016380 [nucleoplasm] R-AUM-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5654828 Strigolactone signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0016500 R-AUM-5633270 AeUmb.TA1851.r1.5UG0016500 [cytosol] R-AUM-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119495 Citrulline biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0016930 R-AUM-9640671 AeUmb.TA1851.r1.5UG0016930 [nucleoplasm] R-AUM-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640760 G1 phase none Aegilops umbellulata AeUmb.TA1851.r1.5UG0016930 R-AUM-9640671 AeUmb.TA1851.r1.5UG0016930 [nucleoplasm] R-AUM-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640887 G1/S transition none Aegilops umbellulata AeUmb.TA1851.r1.5UG0017320 R-AUM-8987531-2 AeUmb.TA1851.r1.5UG0017320 [chloroplast] R-AUM-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119312 Photorespiration none Aegilops umbellulata AeUmb.TA1851.r1.5UG0017320 R-AUM-1125951-2 AeUmb.TA1851.r1.5UG0017320 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.5UG0017340 R-AUM-9927723 AeUmb.TA1851.r1.5UG0017340 [nucleoplasm] R-AUM-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934036 Long day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.5UG0017360 R-AUM-8987531-3 AeUmb.TA1851.r1.5UG0017360 [chloroplast] R-AUM-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119312 Photorespiration none Aegilops umbellulata AeUmb.TA1851.r1.5UG0017360 R-AUM-1125951-3 AeUmb.TA1851.r1.5UG0017360 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.5UG0017760 R-AUM-1126998 AeUmb.TA1851.r1.5UG0017760 [cytosol] R-AUM-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119615 Mevalonate pathway none Aegilops umbellulata AeUmb.TA1851.r1.5UG0017790 R-AUM-1123161 AeUmb.TA1851.r1.5UG0017790 [chloroplast] R-AUM-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119494 Tryptophan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0017800 R-AUM-1124959 AeUmb.TA1851.r1.5UG0017800 [cytosol] R-AUM-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119623 Acyl-CoA synthetase pathway none Aegilops umbellulata AeUmb.TA1851.r1.5UG0017890 R-AUM-1127491 AeUmb.TA1851.r1.5UG0017890 [chloroplast] R-AUM-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119312 Photorespiration none Aegilops umbellulata AeUmb.TA1851.r1.5UG0018420 R-AUM-5632251 AeUmb.TA1851.r1.5UG0018420 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0018560 R-AUM-1123557 AeUmb.TA1851.r1.5UG0018560 [cytosol] R-AUM-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119273 Lysine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0018560 R-AUM-1123557 AeUmb.TA1851.r1.5UG0018560 [cytosol] R-AUM-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119283 Lysine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.5UG0018560 R-AUM-1123557 AeUmb.TA1851.r1.5UG0018560 [cytosol] R-AUM-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119295 Homoserine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0018560 R-AUM-5606479 AeUmb.TA1851.r1.5UG0018560 [plastid stroma] R-AUM-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119419 Lysine biosynthesis VI none Aegilops umbellulata AeUmb.TA1851.r1.5UG0018640 R-AUM-1127443 AeUmb.TA1851.r1.5UG0018640 [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0019210 R-AUM-1122936 AeUmb.TA1851.r1.5UG0019210 [cytosol] R-AUM-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119452 Galactose degradation II none Aegilops umbellulata AeUmb.TA1851.r1.5UG0019290 R-AUM-4415015 AeUmb.TA1851.r1.5UG0019290 [cytosol] R-AUM-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-3899351 Abscisic acid (ABA) mediated signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0019470 R-AUM-9826647 AeUmb.TA1851.r1.5UG0019470 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.5UG0019480 R-AUM-9826647-2 AeUmb.TA1851.r1.5UG0019480 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.5UG0019510 R-AUM-5083827 AeUmb.TA1851.r1.5UG0019510 [mitochondrial matrix] R-AUM-1119319 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119319 Alanine biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.5UG0019510 R-AUM-5083827 AeUmb.TA1851.r1.5UG0019510 [mitochondrial matrix] R-AUM-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119612 Cysteine degradation none Aegilops umbellulata AeUmb.TA1851.r1.5UG0019930 R-AUM-6787276 AeUmb.TA1851.r1.5UG0019930 [plastid stroma] R-AUM-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119261 Salicylate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0019930 R-AUM-6787950 AeUmb.TA1851.r1.5UG0019930 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0019940 R-AUM-1122242-4 AeUmb.TA1851.r1.5UG0019940 [cytosol] R-AUM-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119267 Phenylalanine degradation III none Aegilops umbellulata AeUmb.TA1851.r1.5UG0020260 R-AUM-1125587 AeUmb.TA1851.r1.5UG0020260 [cytosol] R-AUM-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119379 Flavin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0020360 R-AUM-1123096 AeUmb.TA1851.r1.5UG0020360 [mitochondrial inner membrane] R-AUM-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119533 TCA cycle (plant) none Aegilops umbellulata AeUmb.TA1851.r1.5UG0020370 R-AUM-6786947 AeUmb.TA1851.r1.5UG0020370 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0020620 R-AUM-1129438-2 AeUmb.TA1851.r1.5UG0020620 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0021050 R-AUM-9640729 AeUmb.TA1851.r1.5UG0021050 [nucleoplasm] R-AUM-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640760 G1 phase none Aegilops umbellulata AeUmb.TA1851.r1.5UG0021050 R-AUM-9640729 AeUmb.TA1851.r1.5UG0021050 [nucleoplasm] R-AUM-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640887 G1/S transition none Aegilops umbellulata AeUmb.TA1851.r1.5UG0021210 R-AUM-1124956 AeUmb.TA1851.r1.5UG0021210 [cytosol] R-AUM-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119276 Choline biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.5UG0021230 R-AUM-6788036 AeUmb.TA1851.r1.5UG0021230 [cytosol] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0021230 R-AUM-1126611 AeUmb.TA1851.r1.5UG0021230 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0021370 R-AUM-1128160 AeUmb.TA1851.r1.5UG0021370 [cytosol] R-AUM-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119516 Trehalose biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0021480 R-AUM-6786969 AeUmb.TA1851.r1.5UG0021480 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0021480 R-AUM-6787121 AeUmb.TA1851.r1.5UG0021480 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0021480 R-AUM-6786969 AeUmb.TA1851.r1.5UG0021480 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0021490 R-AUM-6786969-2 AeUmb.TA1851.r1.5UG0021490 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0021490 R-AUM-6787121-2 AeUmb.TA1851.r1.5UG0021490 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0021490 R-AUM-6786969-2 AeUmb.TA1851.r1.5UG0021490 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0021550 R-AUM-2730728 AeUmb.TA1851.r1.5UG0021550 [cytosol] R-AUM-1119413 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119413 Trans-zeatin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0022160 R-AUM-1124813 AeUmb.TA1851.r1.5UG0022160 [mitochondrial matrix] R-AUM-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119337 Proline degradation none Aegilops umbellulata AeUmb.TA1851.r1.5UG0022160 R-AUM-8986570 AeUmb.TA1851.r1.5UG0022160 [mitochondrial matrix] R-AUM-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119365 Lysine degradation II none Aegilops umbellulata AeUmb.TA1851.r1.5UG0022160 R-AUM-9658682 AeUmb.TA1851.r1.5UG0022160 [cytosol] R-AUM-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119567 Beta-alanine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0022230 R-AUM-5679378 AeUmb.TA1851.r1.5UG0022230 [nucleoplasm] R-AUM-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5679411 Gibberellin signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0022230 R-AUM-5679378 AeUmb.TA1851.r1.5UG0022230 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0022230 R-AUM-6787094 AeUmb.TA1851.r1.5UG0022230 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0022230 R-AUM-5679378 AeUmb.TA1851.r1.5UG0022230 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0022260 R-AUM-8854102 AeUmb.TA1851.r1.5UG0022260 [cytosol] R-AUM-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119556 Choline biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0022310 R-AUM-9607102 AeUmb.TA1851.r1.5UG0022310 [mitochondrion] R-AUM-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9607185 Generation of superoxide radicals none Aegilops umbellulata AeUmb.TA1851.r1.5UG0022990 R-AUM-5654765 AeUmb.TA1851.r1.5UG0022990 [cytosol] R-AUM-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119446 Lysine degradation I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0023160 R-AUM-1124334 AeUmb.TA1851.r1.5UG0023160 [plasma membrane] R-AUM-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119314 Cellulose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0023240 R-AUM-1124786 AeUmb.TA1851.r1.5UG0023240 [cytosol] R-AUM-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119276 Choline biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.5UG0023380 R-AUM-1125953 AeUmb.TA1851.r1.5UG0023380 [cytosol] R-AUM-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119316 Phenylpropanoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0023410 R-AUM-6787948 AeUmb.TA1851.r1.5UG0023410 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0023420 R-AUM-6787876 AeUmb.TA1851.r1.5UG0023420 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0023430 R-AUM-6787876-2 AeUmb.TA1851.r1.5UG0023430 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0024110 R-AUM-1126542 AeUmb.TA1851.r1.5UG0024110 [cytosol] R-AUM-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119523 Tetrahydrofolate biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.5UG0024110 R-AUM-1126542 AeUmb.TA1851.r1.5UG0024110 [cytosol] R-AUM-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119617 Folate polyglutamylation I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0024200 R-AUM-5679470 AeUmb.TA1851.r1.5UG0024200 [nucleoplasm] R-AUM-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5679411 Gibberellin signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0024240 R-AUM-1122827 AeUmb.TA1851.r1.5UG0024240 [cytosol] R-AUM-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119334 Ethylene biosynthesis from methionine none Aegilops umbellulata AeUmb.TA1851.r1.5UG0024250 R-AUM-1122827-2 AeUmb.TA1851.r1.5UG0024250 [cytosol] R-AUM-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119334 Ethylene biosynthesis from methionine none Aegilops umbellulata AeUmb.TA1851.r1.5UG0024300 R-AUM-9611489 LYP4 [plasma membrane] R-AUM-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops umbellulata AeUmb.TA1851.r1.5UG0024370 R-AUM-1123097 AeUmb.TA1851.r1.5UG0024370 [cytosol] R-AUM-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119341 Galactosylcyclitol biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0024490 R-AUM-1122877 AeUmb.TA1851.r1.5UG0024490 [cytosol] R-AUM-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119586 Cyanate degradation none Aegilops umbellulata AeUmb.TA1851.r1.5UG0024650 R-AUM-1126380 AeUmb.TA1851.r1.5UG0024650 [cytosol] R-AUM-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119609 Phaseic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0025380 R-AUM-1128980 AeUmb.TA1851.r1.5UG0025380 [cytosol] R-AUM-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119586 Cyanate degradation none Aegilops umbellulata AeUmb.TA1851.r1.5UG0025460 R-AUM-9640777 AeUmb.TA1851.r1.5UG0025460 [nucleoplasm] R-AUM-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640760 G1 phase none Aegilops umbellulata AeUmb.TA1851.r1.5UG0025460 R-AUM-9640777 AeUmb.TA1851.r1.5UG0025460 [nucleoplasm] R-AUM-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640887 G1/S transition none Aegilops umbellulata AeUmb.TA1851.r1.5UG0025480 R-AUM-9640777-2 AeUmb.TA1851.r1.5UG0025480 [nucleoplasm] R-AUM-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640760 G1 phase none Aegilops umbellulata AeUmb.TA1851.r1.5UG0025480 R-AUM-9640777-2 AeUmb.TA1851.r1.5UG0025480 [nucleoplasm] R-AUM-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640887 G1/S transition none Aegilops umbellulata AeUmb.TA1851.r1.5UG0025490 R-AUM-2960195 AeUmb.TA1851.r1.5UG0025490 [cytosol] R-AUM-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119410 Ascorbate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0025490 R-AUM-2960195 AeUmb.TA1851.r1.5UG0025490 [cytosol] R-AUM-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119570 Cytosolic glycolysis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0025680 R-AUM-9918264 ISA3 [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0026070 R-AUM-1130049-3 AeUmb.TA1851.r1.5UG0026070 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0026090 R-AUM-1130049-2 AeUmb.TA1851.r1.5UG0026090 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0027290 R-AUM-2960790 AeUmb.TA1851.r1.5UG0027290 [cytosol] R-AUM-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119386 UDP-N-acetylgalactosamine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0027290 R-AUM-2960790 AeUmb.TA1851.r1.5UG0027290 [cytosol] R-AUM-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030654 Primary root development none Aegilops umbellulata AeUmb.TA1851.r1.5UG0027390 R-AUM-6786917 AeUmb.TA1851.r1.5UG0027390 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0027410 R-AUM-9608743 AeUmb.TA1851.r1.5UG0027410 [cytosol] R-AUM-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9608575 Reproductive meristem phase change none Aegilops umbellulata AeUmb.TA1851.r1.5UG0027410 R-AUM-9608705 AeUmb.TA1851.r1.5UG0027410 [nucleoplasm] R-AUM-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9608575 Reproductive meristem phase change none Aegilops umbellulata AeUmb.TA1851.r1.5UG0027460 R-AUM-8987499-2 AeUmb.TA1851.r1.5UG0027460 [peroxisomal matrix] R-AUM-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119312 Photorespiration none Aegilops umbellulata AeUmb.TA1851.r1.5UG0027460 R-AUM-1130222-2 AeUmb.TA1851.r1.5UG0027460 [cytosol] R-AUM-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119596 Glutamate biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0027540 R-AUM-8868866 AeUmb.TA1851.r1.5UG0027540 [endoplasmic reticulum membrane] R-AUM-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8868949 Intracellular auxin transport none Aegilops umbellulata AeUmb.TA1851.r1.5UG0027750 R-AUM-1125142 AeUmb.TA1851.r1.5UG0027750 [cytosol] R-AUM-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119615 Mevalonate pathway none Aegilops umbellulata AeUmb.TA1851.r1.5UG0027860 R-AUM-1122454 AeUmb.TA1851.r1.5UG0027860 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0028880 R-AUM-5608218 AeUmb.TA1851.r1.5UG0028880 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0028930 R-AUM-1129921 AeUmb.TA1851.r1.5UG0028930 [cytosol] R-AUM-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119428 GDP-D-rhamnose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0028930 R-AUM-1129921 AeUmb.TA1851.r1.5UG0028930 [cytosol] R-AUM-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops umbellulata AeUmb.TA1851.r1.5UG0029150 R-AUM-1125374 AeUmb.TA1851.r1.5UG0029150 [cytosol] R-AUM-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119586 Cyanate degradation none Aegilops umbellulata AeUmb.TA1851.r1.5UG0029250 R-AUM-8858081 AeUmb.TA1851.r1.5UG0029250 [plasma membrane] R-AUM-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8858053 Polar auxin transport none Aegilops umbellulata AeUmb.TA1851.r1.5UG0029270 R-AUM-1123575 AeUmb.TA1851.r1.5UG0029270 [cytosol] R-AUM-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119297 Beta-alanine biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.5UG0029320 R-AUM-1124138 AeUmb.TA1851.r1.5UG0029320 [cytosol] R-AUM-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119394 Pantothenate and coenzyme A biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.5UG0029330 R-AUM-1124905 AeUmb.TA1851.r1.5UG0029330 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.5UG0029840 R-AUM-1125489 AeUmb.TA1851.r1.5UG0029840 [Golgi membrane] R-AUM-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119428 GDP-D-rhamnose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0029840 R-AUM-1125489 AeUmb.TA1851.r1.5UG0029840 [Golgi membrane] R-AUM-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops umbellulata AeUmb.TA1851.r1.5UG0029840 R-AUM-1125489 AeUmb.TA1851.r1.5UG0029840 [Golgi membrane] R-AUM-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops umbellulata AeUmb.TA1851.r1.5UG0030520 R-AUM-1129136 AeUmb.TA1851.r1.5UG0030520 [plastid stroma] R-AUM-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Aegilops umbellulata AeUmb.TA1851.r1.5UG0030930 R-AUM-1128511 AeUmb.TA1851.r1.5UG0030930 [cytosol] R-AUM-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119506 tyrosine degradation I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0031130 R-AUM-9639010 AeUmb.TA1851.r1.5UG0031130 [cytosol] R-AUM-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119434 Phytic acid biosynthesis (lipid-independent) none Aegilops umbellulata AeUmb.TA1851.r1.5UG0031210 R-AUM-6786926-5 AeUmb.TA1851.r1.5UG0031210 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0031220 R-AUM-6786926 AeUmb.TA1851.r1.5UG0031220 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0031230 R-AUM-6786926-7 AeUmb.TA1851.r1.5UG0031230 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0031240 R-AUM-6786926-3 AeUmb.TA1851.r1.5UG0031240 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0031250 R-AUM-6786926-2 AeUmb.TA1851.r1.5UG0031250 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0031260 R-AUM-9675866 AeUmb.TA1851.r1.5UG0031260 [nucleoplasm] R-AUM-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675782 Maturation none Aegilops umbellulata AeUmb.TA1851.r1.5UG0031260 R-AUM-9675866 AeUmb.TA1851.r1.5UG0031260 [nucleoplasm] R-AUM-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675815 Leading strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0031260 R-AUM-9675866 AeUmb.TA1851.r1.5UG0031260 [nucleoplasm] R-AUM-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675885 Lagging strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0031550 R-AUM-8879050-6 CBF1 homolog [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.5UG0031660 R-AUM-8879050-2 CBF1 homolog [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.5UG0031720 R-AUM-8879050-5 CBF1 homolog [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.5UG0031750 R-AUM-9766868 DREB1A [nucleoplasm] R-AUM-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9766881 TF network involved in salinity response none Aegilops umbellulata AeUmb.TA1851.r1.5UG0031820 R-AUM-9916305 AeUmb.TA1851.r1.5UG0031820 [nucleoplasm] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.5UG0031960 R-AUM-1130394 AeUmb.TA1851.r1.5UG0031960 [cytosol] R-AUM-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119452 Galactose degradation II none Aegilops umbellulata AeUmb.TA1851.r1.5UG0032130 R-AUM-9924533 TAC1 [nucleoplasm] R-AUM-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops umbellulata AeUmb.TA1851.r1.5UG0032210 R-AUM-1126373 AeUmb.TA1851.r1.5UG0032210 [cytosol] R-AUM-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0032320 R-AUM-1122564 AeUmb.TA1851.r1.5UG0032320 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0032470 R-AUM-1130049 AeUmb.TA1851.r1.5UG0032470 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0032500 R-AUM-8933784 AeUmb.TA1851.r1.5UG0032500 [nucleoplasm] R-AUM-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8933811 Circadian rhythm none Aegilops umbellulata AeUmb.TA1851.r1.5UG0032540 R-AUM-1127502 AeUmb.TA1851.r1.5UG0032540 [cytosol] R-AUM-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119394 Pantothenate and coenzyme A biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.5UG0032890 R-AUM-1128877 AeUmb.TA1851.r1.5UG0032890 [plastid stroma] R-AUM-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119424 Plastid glycolysis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0032890 R-AUM-1128877 AeUmb.TA1851.r1.5UG0032890 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.5UG0033470 R-AUM-1126440 AeUmb.TA1851.r1.5UG0033470 [plastid stroma] R-AUM-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119430 Chorismate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0033500 R-AUM-9645954 AeUmb.TA1851.r1.5UG0033500 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.5UG0033590 R-AUM-9927863 phospho-AeUmb.TA1851.r1.5UG0033590 [nucleoplasm] R-AUM-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934257 Transition from vegetative to reproductive shoot apical meristem none Aegilops umbellulata AeUmb.TA1851.r1.5UG0033590 R-AUM-9927884 AeUmb.TA1851.r1.5UG0033590 [nucleoplasm] R-AUM-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934257 Transition from vegetative to reproductive shoot apical meristem none Aegilops umbellulata AeUmb.TA1851.r1.5UG0033590 R-AUM-9927863 phospho-AeUmb.TA1851.r1.5UG0033590 [nucleoplasm] R-AUM-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9928831 Severe drought none Aegilops umbellulata AeUmb.TA1851.r1.5UG0033620 R-AUM-9618156 AeUmb.TA1851.r1.5UG0033620 [plasma membrane] R-AUM-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9618218 Arsenic uptake and detoxification none Aegilops umbellulata AeUmb.TA1851.r1.5UG0033870 R-AUM-9675280 AeUmb.TA1851.r1.5UG0033870 [nucleoplasm] R-AUM-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030680 Crown root development none Aegilops umbellulata AeUmb.TA1851.r1.5UG0033930 R-AUM-1129187 AeUmb.TA1851.r1.5UG0033930 [cytosol] R-AUM-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119276 Choline biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.5UG0034520 R-AUM-9924417 SAUR39 [cytosol] R-AUM-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops umbellulata AeUmb.TA1851.r1.5UG0035550 R-AUM-1124095 AeUmb.TA1851.r1.5UG0035550 [cytosol] R-AUM-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119452 Galactose degradation II none Aegilops umbellulata AeUmb.TA1851.r1.5UG0035600 R-AUM-8868994 AeUmb.TA1851.r1.5UG0035600 [endoplasmic reticulum membrane] R-AUM-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8868949 Intracellular auxin transport none Aegilops umbellulata AeUmb.TA1851.r1.5UG0035680 R-AUM-1123525 AeUmb.TA1851.r1.5UG0035680 [cytosol] R-AUM-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119384 NAD biosynthesis I (from aspartate) none Aegilops umbellulata AeUmb.TA1851.r1.5UG0035830 R-AUM-5679404 AeUmb.TA1851.r1.5UG0035830 [nucleoplasm] R-AUM-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5679411 Gibberellin signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0036880 R-AUM-1130348 AeUmb.TA1851.r1.5UG0036880 [cytosol] R-AUM-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0037160 R-AUM-1129481 AeUmb.TA1851.r1.5UG0037160 [cytosol] R-AUM-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119389 Phenylalanine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0037470 R-AUM-5221144 AeUmb.TA1851.r1.5UG0037470 [plastid] R-AUM-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119374 Abscisic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0037600 R-AUM-5631953 AeUmb.TA1851.r1.5UG0037600 [mitochondrial matrix] R-AUM-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119289 Arginine degradation none Aegilops umbellulata AeUmb.TA1851.r1.5UG0037600 R-AUM-1124214 AeUmb.TA1851.r1.5UG0037600 [cytosol] R-AUM-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119318 Proline biosynthesis V (from arginine) none Aegilops umbellulata AeUmb.TA1851.r1.5UG0037600 R-AUM-1124214 AeUmb.TA1851.r1.5UG0037600 [cytosol] R-AUM-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119610 Biotin biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.5UG0037990 R-AUM-1122892 AeUmb.TA1851.r1.5UG0037990 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0037990 R-AUM-1122892 AeUmb.TA1851.r1.5UG0037990 [nucleoplasm] R-AUM-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030557 Lateral root initiation none Aegilops umbellulata AeUmb.TA1851.r1.5UG0038370 R-AUM-1128092 AeUmb.TA1851.r1.5UG0038370 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0038370 R-AUM-1128092 AeUmb.TA1851.r1.5UG0038370 [nucleoplasm] R-AUM-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030557 Lateral root initiation none Aegilops umbellulata AeUmb.TA1851.r1.5UG0038370 R-AUM-1128092 AeUmb.TA1851.r1.5UG0038370 [nucleoplasm] R-AUM-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030654 Primary root development none Aegilops umbellulata AeUmb.TA1851.r1.5UG0038400 R-AUM-1128257 AeUmb.TA1851.r1.5UG0038400 [plastid stroma] R-AUM-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119529 Sulfate activation for sulfonation none Aegilops umbellulata AeUmb.TA1851.r1.5UG0039080 R-AUM-1126604 AeUmb.TA1851.r1.5UG0039080 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0039240 R-AUM-8934009 AeUmb.TA1851.r1.5UG0039240 [nucleoplasm] R-AUM-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934036 Long day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.5UG0039240 R-AUM-8934009 AeUmb.TA1851.r1.5UG0039240 [nucleoplasm] R-AUM-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934257 Transition from vegetative to reproductive shoot apical meristem none Aegilops umbellulata AeUmb.TA1851.r1.5UG0039240 R-AUM-8934009 AeUmb.TA1851.r1.5UG0039240 [nucleoplasm] R-AUM-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9609102 Flower development none Aegilops umbellulata AeUmb.TA1851.r1.5UG0039320 R-AUM-9639171 AeUmb.TA1851.r1.5UG0039320 [plant-type vacuole membrane] R-AUM-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9639136 Response to Aluminum stress none Aegilops umbellulata AeUmb.TA1851.r1.5UG0039500 R-AUM-1125460-2 AeUmb.TA1851.r1.5UG0039500 [cytosol] R-AUM-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119452 Galactose degradation II none Aegilops umbellulata AeUmb.TA1851.r1.5UG0039500 R-AUM-1125460-2 AeUmb.TA1851.r1.5UG0039500 [cytosol] R-AUM-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119563 UDP-D-xylose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0039500 R-AUM-1125460-2 AeUmb.TA1851.r1.5UG0039500 [cytosol] R-AUM-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops umbellulata AeUmb.TA1851.r1.5UG0039690 R-AUM-9640694 AeUmb.TA1851.r1.5UG0039690 [nucleoplasm] R-AUM-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640882 Assembly of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.5UG0039690 R-AUM-9640694 AeUmb.TA1851.r1.5UG0039690 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.5UG0039800 R-AUM-1125504 AeUmb.TA1851.r1.5UG0039800 [cytosol] R-AUM-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119273 Lysine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0039800 R-AUM-1125504 AeUmb.TA1851.r1.5UG0039800 [cytosol] R-AUM-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119283 Lysine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.5UG0039800 R-AUM-1125504 AeUmb.TA1851.r1.5UG0039800 [cytosol] R-AUM-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119295 Homoserine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0039800 R-AUM-5606489 AeUmb.TA1851.r1.5UG0039800 [plastid stroma] R-AUM-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119419 Lysine biosynthesis VI none Aegilops umbellulata AeUmb.TA1851.r1.5UG0040080 R-AUM-8933816 AeUmb.TA1851.r1.5UG0040080 [nucleoplasm] R-AUM-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8933811 Circadian rhythm none Aegilops umbellulata AeUmb.TA1851.r1.5UG0040140 R-AUM-4415109 phospho-AeUmb.TA1851.r1.5UG0040140 [cytosol] R-AUM-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-3899351 Abscisic acid (ABA) mediated signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0041460 R-AUM-1123404 AeUmb.TA1851.r1.5UG0041460 [peroxisomal matrix] R-AUM-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119407 Ureide biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0041480 R-AUM-9025548 AeUmb.TA1851.r1.5UG0041480 [endoplasmic reticulum membrane] R-AUM-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119325 Sphingolipid metabolism none Aegilops umbellulata AeUmb.TA1851.r1.5UG0041520 R-AUM-1124484 AeUmb.TA1851.r1.5UG0041520 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.5UG0041880 R-AUM-5632110 AeUmb.TA1851.r1.5UG0041880 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0041880 R-AUM-5632110 AeUmb.TA1851.r1.5UG0041880 [nucleoplasm] R-AUM-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5679411 Gibberellin signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0042220 R-AUM-8987551 AeUmb.TA1851.r1.5UG0042220 [peroxisomal matrix] R-AUM-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119312 Photorespiration none Aegilops umbellulata AeUmb.TA1851.r1.5UG0042220 R-AUM-1124984 AeUmb.TA1851.r1.5UG0042220 [cytosol] R-AUM-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119596 Glutamate biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0042470 R-AUM-1250418-2 AeUmb.TA1851.r1.5UG0042470 [cytosol] R-AUM-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119374 Abscisic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0042470 R-AUM-1129305-2 AeUmb.TA1851.r1.5UG0042470 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0042480 R-AUM-1250418 AeUmb.TA1851.r1.5UG0042480 [cytosol] R-AUM-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119374 Abscisic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0042480 R-AUM-1129305 AeUmb.TA1851.r1.5UG0042480 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0042630 R-AUM-9675838 AeUmb.TA1851.r1.5UG0042630 [nucleoplasm] R-AUM-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675815 Leading strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0043810 R-AUM-1129781-3 AeUmb.TA1851.r1.5UG0043810 [chloroplast] R-AUM-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119494 Tryptophan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0043850 R-AUM-1129781-4 AeUmb.TA1851.r1.5UG0043850 [chloroplast] R-AUM-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119494 Tryptophan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0043860 R-AUM-1129781-2 AeUmb.TA1851.r1.5UG0043860 [chloroplast] R-AUM-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119494 Tryptophan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0044010 R-AUM-1126436-2 AeUmb.TA1851.r1.5UG0044010 [cytosol] R-AUM-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119615 Mevalonate pathway none Aegilops umbellulata AeUmb.TA1851.r1.5UG0045260 R-AUM-1128553 AeUmb.TA1851.r1.5UG0045260 [cytosol] R-AUM-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Aegilops umbellulata AeUmb.TA1851.r1.5UG0045260 R-AUM-1128553 AeUmb.TA1851.r1.5UG0045260 [cytosol] R-AUM-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119370 Sterol biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0045260 R-AUM-1128553 AeUmb.TA1851.r1.5UG0045260 [cytosol] R-AUM-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119439 Cholesterol biosynthesis III (via desmosterol) none Aegilops umbellulata AeUmb.TA1851.r1.5UG0045260 R-AUM-1128553 AeUmb.TA1851.r1.5UG0045260 [cytosol] R-AUM-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119559 Cholesterol biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0045310 R-AUM-5632241 AeUmb.TA1851.r1.5UG0045310 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0045730 R-AUM-1122861 AeUmb.TA1851.r1.5UG0045730 [plasma membrane] R-AUM-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119314 Cellulose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0046250 R-AUM-1250417 AeUmb.TA1851.r1.5UG0046250 [cytosol] R-AUM-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119374 Abscisic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0046930 R-AUM-1122398 AeUmb.TA1851.r1.5UG0046930 [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0047130 R-AUM-9608682 AeUmb.TA1851.r1.5UG0047130 [nucleoplasm] R-AUM-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934036 Long day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.5UG0047130 R-AUM-9608682 AeUmb.TA1851.r1.5UG0047130 [nucleoplasm] R-AUM-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9608575 Reproductive meristem phase change none Aegilops umbellulata AeUmb.TA1851.r1.5UG0047130 R-AUM-9608606 AeUmb.TA1851.r1.5UG0047130 [cytosol] R-AUM-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9608575 Reproductive meristem phase change none Aegilops umbellulata AeUmb.TA1851.r1.5UG0047160 R-AUM-1126714-2 AeUmb.TA1851.r1.5UG0047160 [cytosol] R-AUM-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119273 Lysine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0047160 R-AUM-1126714-2 AeUmb.TA1851.r1.5UG0047160 [cytosol] R-AUM-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119283 Lysine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.5UG0047160 R-AUM-1126714-2 AeUmb.TA1851.r1.5UG0047160 [cytosol] R-AUM-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119295 Homoserine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0047160 R-AUM-5606484-2 AeUmb.TA1851.r1.5UG0047160 [plastid stroma] R-AUM-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119419 Lysine biosynthesis VI none Aegilops umbellulata AeUmb.TA1851.r1.5UG0047300 R-AUM-1124274 AeUmb.TA1851.r1.5UG0047300 [cytosol] R-AUM-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119513 Pinobanksin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0047300 R-AUM-1124274 AeUmb.TA1851.r1.5UG0047300 [cytosol] R-AUM-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119531 Flavonoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0048280 R-AUM-1123751 AeUmb.TA1851.r1.5UG0048280 [cytosol] R-AUM-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119292 Cytokinins 7-N-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0048280 R-AUM-1123751 AeUmb.TA1851.r1.5UG0048280 [cytosol] R-AUM-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119375 Cytokinins 9-N-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0048280 R-AUM-1123751 AeUmb.TA1851.r1.5UG0048280 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0048350 R-AUM-8986695 AeUmb.TA1851.r1.5UG0048350 [endoplasmic reticulum membrane] R-AUM-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8986768 Anther and pollen development none Aegilops umbellulata AeUmb.TA1851.r1.5UG0048480 R-AUM-1128656 AeUmb.TA1851.r1.5UG0048480 [chloroplast] R-AUM-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119494 Tryptophan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0048640 R-AUM-1126238 AeUmb.TA1851.r1.5UG0048640 [chloroplast] R-AUM-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119494 Tryptophan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0048900 R-AUM-9675876 AeUmb.TA1851.r1.5UG0048900 [nucleoplasm] R-AUM-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675782 Maturation none Aegilops umbellulata AeUmb.TA1851.r1.5UG0048900 R-AUM-9675876 AeUmb.TA1851.r1.5UG0048900 [nucleoplasm] R-AUM-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675815 Leading strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0048900 R-AUM-9675876 AeUmb.TA1851.r1.5UG0048900 [nucleoplasm] R-AUM-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675885 Lagging strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0049010 R-AUM-1126728 AeUmb.TA1851.r1.5UG0049010 [plastid stroma] R-AUM-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119424 Plastid glycolysis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0049130 R-AUM-6787009-3 AeUmb.TA1851.r1.5UG0049130 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0049140 R-AUM-6787009 AeUmb.TA1851.r1.5UG0049140 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0049150 R-AUM-6787009-2 AeUmb.TA1851.r1.5UG0049150 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0049500 R-AUM-5632232 phospho-AeUmb.TA1851.r1.5UG0049500 [plasma membrane] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0049520 R-AUM-9025698-2 AeUmb.TA1851.r1.5UG0049520 [plasma membrane] R-AUM-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9025727 Iron uptake and transport in root vascular system none Aegilops umbellulata AeUmb.TA1851.r1.5UG0049590 R-AUM-9611526 CEBiP [plasma membrane] R-AUM-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops umbellulata AeUmb.TA1851.r1.5UG0049650 R-AUM-1128641 AeUmb.TA1851.r1.5UG0049650 [cytosol] R-AUM-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119331 Cysteine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0049660 R-AUM-1128263 AeUmb.TA1851.r1.5UG0049660 [plastid stroma] R-AUM-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119509 Histidine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0049860 R-AUM-1127899 AeUmb.TA1851.r1.5UG0049860 [cytosol] R-AUM-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119370 Sterol biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0049980 R-AUM-1130136 AeUmb.TA1851.r1.5UG0049980 [mitochondrial matrix] R-AUM-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119533 TCA cycle (plant) none Aegilops umbellulata AeUmb.TA1851.r1.5UG0049980 R-AUM-1130136 AeUmb.TA1851.r1.5UG0049980 [mitochondrial matrix] R-AUM-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119540 Leucine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0050090 R-AUM-9639211 AeUmb.TA1851.r1.5UG0050090 [plant-type vacuole membrane] R-AUM-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9639136 Response to Aluminum stress none Aegilops umbellulata AeUmb.TA1851.r1.5UG0050120 R-AUM-9640687 AeUmb.TA1851.r1.5UG0050120 [nucleoplasm] R-AUM-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640760 G1 phase none Aegilops umbellulata AeUmb.TA1851.r1.5UG0050440 R-AUM-1126307 AeUmb.TA1851.r1.5UG0050440 [cytosol] R-AUM-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119370 Sterol biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0050520 R-AUM-9924360-5 AeUmb.TA1851.r1.5UG0050520 [nucleoplasm] R-AUM-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops umbellulata AeUmb.TA1851.r1.5UG0050530 R-AUM-9924360-3 AeUmb.TA1851.r1.5UG0050530 [nucleoplasm] R-AUM-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops umbellulata AeUmb.TA1851.r1.5UG0050550 R-AUM-9924360-2 AeUmb.TA1851.r1.5UG0050550 [nucleoplasm] R-AUM-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops umbellulata AeUmb.TA1851.r1.5UG0050990 R-AUM-8934063 AeUmb.TA1851.r1.5UG0050990 [nucleoplasm] R-AUM-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934036 Long day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.5UG0050990 R-AUM-8934063 AeUmb.TA1851.r1.5UG0050990 [nucleoplasm] R-AUM-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934108 Short day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.5UG0050990 R-AUM-8934063 AeUmb.TA1851.r1.5UG0050990 [nucleoplasm] R-AUM-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9928946 Drought escape (DE) via ABA-independent pathway none Aegilops umbellulata AeUmb.TA1851.r1.5UG0051420 R-AUM-8934185 AeUmb.TA1851.r1.5UG0051420 [nucleoplasm] R-AUM-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934108 Short day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.5UG0051490 R-AUM-1125610 AeUmb.TA1851.r1.5UG0051490 [cytosol] R-AUM-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119276 Choline biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.5UG0051510 R-AUM-1128298-2 AeUmb.TA1851.r1.5UG0051510 [cytosol] R-AUM-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119271 Threonine degradation none Aegilops umbellulata AeUmb.TA1851.r1.5UG0051510 R-AUM-1128298-2 AeUmb.TA1851.r1.5UG0051510 [cytosol] R-AUM-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119610 Biotin biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.5UG0051550 R-AUM-1128328 AeUmb.TA1851.r1.5UG0051550 [cytosol] R-AUM-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119615 Mevalonate pathway none Aegilops umbellulata AeUmb.TA1851.r1.5UG0051630 R-AUM-9924360-4 AeUmb.TA1851.r1.5UG0051630 [nucleoplasm] R-AUM-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops umbellulata AeUmb.TA1851.r1.5UG0051640 R-AUM-1128298-3 AeUmb.TA1851.r1.5UG0051640 [cytosol] R-AUM-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119271 Threonine degradation none Aegilops umbellulata AeUmb.TA1851.r1.5UG0051640 R-AUM-1128298-3 AeUmb.TA1851.r1.5UG0051640 [cytosol] R-AUM-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119610 Biotin biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.5UG0051720 R-AUM-1125834 AeUmb.TA1851.r1.5UG0051720 [cytosol] R-AUM-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119379 Flavin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0051780 R-AUM-1129478 AeUmb.TA1851.r1.5UG0051780 [cytosol] R-AUM-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119273 Lysine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0051780 R-AUM-1129478 AeUmb.TA1851.r1.5UG0051780 [cytosol] R-AUM-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119283 Lysine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.5UG0051780 R-AUM-5606483 AeUmb.TA1851.r1.5UG0051780 [plastid stroma] R-AUM-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119419 Lysine biosynthesis VI none Aegilops umbellulata AeUmb.TA1851.r1.5UG0052100 R-AUM-9607132-2 RBOHB [plasma membrane] R-AUM-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops umbellulata AeUmb.TA1851.r1.5UG0052100 R-AUM-9611529-2 phospho-phosphorylated-RBOHB [plasma membrane] R-AUM-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops umbellulata AeUmb.TA1851.r1.5UG0052180 R-AUM-1126671 AeUmb.TA1851.r1.5UG0052180 [cytosol] R-AUM-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119534 Pyridoxal 5'-phosphate salvage pathway none Aegilops umbellulata AeUmb.TA1851.r1.5UG0052180 R-AUM-1126671 AeUmb.TA1851.r1.5UG0052180 [cytosol] R-AUM-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119594 Pyridoxal 5'-phosphate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0052250 R-AUM-1126671-2 AeUmb.TA1851.r1.5UG0052250 [cytosol] R-AUM-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119534 Pyridoxal 5'-phosphate salvage pathway none Aegilops umbellulata AeUmb.TA1851.r1.5UG0052250 R-AUM-1126671-2 AeUmb.TA1851.r1.5UG0052250 [cytosol] R-AUM-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119594 Pyridoxal 5'-phosphate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0052370 R-AUM-9618139 AeUmb.TA1851.r1.5UG0052370 [plasma membrane] R-AUM-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9618218 Arsenic uptake and detoxification none Aegilops umbellulata AeUmb.TA1851.r1.5UG0052480 R-AUM-1126113 AeUmb.TA1851.r1.5UG0052480 [cytosol] R-AUM-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119460 Isoleucine biosynthesis from threonine none Aegilops umbellulata AeUmb.TA1851.r1.5UG0052480 R-AUM-1126113 AeUmb.TA1851.r1.5UG0052480 [cytosol] R-AUM-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119496 Pantothenate biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0052480 R-AUM-1126113 AeUmb.TA1851.r1.5UG0052480 [cytosol] R-AUM-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119540 Leucine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0052480 R-AUM-1126113 AeUmb.TA1851.r1.5UG0052480 [cytosol] R-AUM-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119544 Pantothenate biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.5UG0052620 R-AUM-6787007 AeUmb.TA1851.r1.5UG0052620 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0052620 R-AUM-6787147 AeUmb.TA1851.r1.5UG0052620 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.5UG0052620 R-AUM-9826596 OSJAZ3 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.5UG0052690 R-AUM-1127076 AeUmb.TA1851.r1.5UG0052690 [cytosol] R-AUM-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119418 Suberin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0052690 R-AUM-1127076 AeUmb.TA1851.r1.5UG0052690 [cytosol] R-AUM-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops umbellulata AeUmb.TA1851.r1.5UG0053160 R-AUM-1127338 AeUmb.TA1851.r1.5UG0053160 [mitochondrial inner membrane] R-AUM-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119402 Phospholipid biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0053340 R-AUM-9924360 AeUmb.TA1851.r1.5UG0053340 [nucleoplasm] R-AUM-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops umbellulata AeUmb.TA1851.r1.5UG0053450 R-AUM-1127170 AeUmb.TA1851.r1.5UG0053450 [cytosol] R-AUM-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119276 Choline biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.5UG0054130 R-AUM-1127318-2 AeUmb.TA1851.r1.5UG0054130 [cytosol] R-AUM-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0054130 R-AUM-1127318-2 AeUmb.TA1851.r1.5UG0054130 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0054130 R-AUM-1127318-2 AeUmb.TA1851.r1.5UG0054130 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0054160 R-AUM-9658681 AeUmb.TA1851.r1.5UG0054160 [plasma membrane] R-AUM-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119567 Beta-alanine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0054460 R-AUM-9025712-4 AeUmb.TA1851.r1.5UG0054460 [cytosol] R-AUM-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9025754 Mugineic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0054480 R-AUM-9025712-5 AeUmb.TA1851.r1.5UG0054480 [cytosol] R-AUM-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9025754 Mugineic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0054700 R-AUM-5655107 AeUmb.TA1851.r1.5UG0054700 [Golgi lumen] R-AUM-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5655101 Xyloglucan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.5UG0054740 R-AUM-1125194 AeUmb.TA1851.r1.5UG0054740 [cytosol] R-AUM-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119484 Folate polyglutamylation II none Aegilops umbellulata AeUmb.TA1851.r1.5UG0054740 R-AUM-1125194 AeUmb.TA1851.r1.5UG0054740 [cytosol] R-AUM-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119523 Tetrahydrofolate biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.5UG0054740 R-AUM-1125194 AeUmb.TA1851.r1.5UG0054740 [cytosol] R-AUM-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119617 Folate polyglutamylation I none Aegilops umbellulata AeUmb.TA1851.r1.5UG0054840 R-AUM-1126996-2 AeUmb.TA1851.r1.5UG0054840 [cytosol] R-AUM-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119316 Phenylpropanoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0000060 R-AUM-1126115 AeUmb.TA1851.r1.6UG0000060 [cytosol] R-AUM-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119452 Galactose degradation II none Aegilops umbellulata AeUmb.TA1851.r1.6UG0000060 R-AUM-1126115 AeUmb.TA1851.r1.6UG0000060 [cytosol] R-AUM-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119465 Sucrose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0000200 R-AUM-1126830 AeUmb.TA1851.r1.6UG0000200 [mitochondrial matrix] R-AUM-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119533 TCA cycle (plant) none Aegilops umbellulata AeUmb.TA1851.r1.6UG0000210 R-AUM-1126444 AeUmb.TA1851.r1.6UG0000210 [cytosol] R-AUM-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119610 Biotin biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.6UG0000320 R-AUM-5632134 AeUmb.TA1851.r1.6UG0000320 [cytosol] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0000440 R-AUM-9681910 AeUmb.TA1851.r1.6UG0000440 [Golgi membrane] R-AUM-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops umbellulata AeUmb.TA1851.r1.6UG0000570 R-AUM-5632114 AeUmb.TA1851.r1.6UG0000570 [cytosol] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0000600 R-AUM-8933824 AeUmb.TA1851.r1.6UG0000600 [nucleoplasm] R-AUM-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8933811 Circadian rhythm none Aegilops umbellulata AeUmb.TA1851.r1.6UG0000610 R-AUM-9639016 AeUmb.TA1851.r1.6UG0000610 [cytosol] R-AUM-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119410 Ascorbate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0000610 R-AUM-9639016 AeUmb.TA1851.r1.6UG0000610 [cytosol] R-AUM-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119434 Phytic acid biosynthesis (lipid-independent) none Aegilops umbellulata AeUmb.TA1851.r1.6UG0000880 R-AUM-9682481 AeUmb.TA1851.r1.6UG0000880 [cytosol] R-AUM-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119410 Ascorbate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0000880 R-AUM-9682481 AeUmb.TA1851.r1.6UG0000880 [cytosol] R-AUM-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119628 GDP-mannose metabolism none Aegilops umbellulata AeUmb.TA1851.r1.6UG0000890 R-AUM-1128534 AeUmb.TA1851.r1.6UG0000890 [cytosol] R-AUM-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119437 Glutathione redox reactions I none Aegilops umbellulata AeUmb.TA1851.r1.6UG0001910 R-AUM-9640734 AeUmb.TA1851.r1.6UG0001910 [nucleoplasm] R-AUM-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640887 G1/S transition none Aegilops umbellulata AeUmb.TA1851.r1.6UG0001910 R-AUM-9640881 phospho-AeUmb.TA1851.r1.6UG0001910 [nucleoplasm] R-AUM-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640887 G1/S transition none Aegilops umbellulata AeUmb.TA1851.r1.6UG0002390 R-AUM-9658729 AeUmb.TA1851.r1.6UG0002390 [cytosol] R-AUM-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119389 Phenylalanine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.6UG0002390 R-AUM-9658729 AeUmb.TA1851.r1.6UG0002390 [cytosol] R-AUM-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119506 tyrosine degradation I none Aegilops umbellulata AeUmb.TA1851.r1.6UG0003360 R-AUM-1127539 AeUmb.TA1851.r1.6UG0003360 [cytosol] R-AUM-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Aegilops umbellulata AeUmb.TA1851.r1.6UG0003360 R-AUM-1127539 AeUmb.TA1851.r1.6UG0003360 [cytosol] R-AUM-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119439 Cholesterol biosynthesis III (via desmosterol) none Aegilops umbellulata AeUmb.TA1851.r1.6UG0003360 R-AUM-1127539 AeUmb.TA1851.r1.6UG0003360 [cytosol] R-AUM-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119559 Cholesterol biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.6UG0004030 R-AUM-1125804-2 AeUmb.TA1851.r1.6UG0004030 [cytosol] R-AUM-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119300 Glycolipid desaturation none Aegilops umbellulata AeUmb.TA1851.r1.6UG0004040 R-AUM-5654797 AeUmb.TA1851.r1.6UG0004040 [nucleoplasm] R-AUM-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5654828 Strigolactone signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0004120 R-AUM-6788085 AeUmb.TA1851.r1.6UG0004120 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0004430 R-AUM-1125839-2 AeUmb.TA1851.r1.6UG0004430 [cytosol] R-AUM-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119386 UDP-N-acetylgalactosamine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0004480 R-AUM-9025698 AeUmb.TA1851.r1.6UG0004480 [plasma membrane] R-AUM-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9025727 Iron uptake and transport in root vascular system none Aegilops umbellulata AeUmb.TA1851.r1.6UG0004530 R-AUM-1126593 AeUmb.TA1851.r1.6UG0004530 [endosome] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0004530 R-AUM-5679293 AeUmb.TA1851.r1.6UG0004530 [plasma membrane] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0004530 R-AUM-8858098 AeUmb.TA1851.r1.6UG0004530 [plasma membrane] R-AUM-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8858053 Polar auxin transport none Aegilops umbellulata AeUmb.TA1851.r1.6UG0004760 R-AUM-9645907 AeUmb.TA1851.r1.6UG0004760 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.6UG0004760 R-AUM-9645907 AeUmb.TA1851.r1.6UG0004760 [nucleoplasm] R-AUM-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675824 DNA replication Initiation none Aegilops umbellulata AeUmb.TA1851.r1.6UG0005460 R-AUM-9684771-2 AeUmb.TA1851.r1.6UG0005460 [cytosol] R-AUM-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9609102 Flower development none Aegilops umbellulata AeUmb.TA1851.r1.6UG0005640 R-AUM-9681886 AeUmb.TA1851.r1.6UG0005640 [cytosol] R-AUM-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops umbellulata AeUmb.TA1851.r1.6UG0006270 R-AUM-1123855 AeUmb.TA1851.r1.6UG0006270 [plastid] R-AUM-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119407 Ureide biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0006410 R-AUM-1125307 AeUmb.TA1851.r1.6UG0006410 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0006500 R-AUM-5084918 AeUmb.TA1851.r1.6UG0006500 [cytosol] R-AUM-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119624 Methionine salvage pathway none Aegilops umbellulata AeUmb.TA1851.r1.6UG0006680 R-AUM-1122242-2 AeUmb.TA1851.r1.6UG0006680 [cytosol] R-AUM-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119267 Phenylalanine degradation III none Aegilops umbellulata AeUmb.TA1851.r1.6UG0007270 R-AUM-6788234 AeUmb.TA1851.r1.6UG0007270 [cytosol] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0007270 R-AUM-1124041 AeUmb.TA1851.r1.6UG0007270 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0007300 R-AUM-9645941 AeUmb.TA1851.r1.6UG0007300 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.6UG0007410 R-AUM-9675807 AeUmb.TA1851.r1.6UG0007410 [nucleoplasm] R-AUM-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675782 Maturation none Aegilops umbellulata AeUmb.TA1851.r1.6UG0007410 R-AUM-9675807 AeUmb.TA1851.r1.6UG0007410 [nucleoplasm] R-AUM-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675815 Leading strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0007410 R-AUM-9675807 AeUmb.TA1851.r1.6UG0007410 [nucleoplasm] R-AUM-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675885 Lagging strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0008620 R-AUM-1127455 AeUmb.TA1851.r1.6UG0008620 [cytosol] R-AUM-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119460 Isoleucine biosynthesis from threonine none Aegilops umbellulata AeUmb.TA1851.r1.6UG0008620 R-AUM-1127455 AeUmb.TA1851.r1.6UG0008620 [cytosol] R-AUM-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119600 Valine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0009020 R-AUM-5138500 AeUmb.TA1851.r1.6UG0009020 [plastid stroma] R-AUM-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119263 Arginine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0009020 R-AUM-1129397 AeUmb.TA1851.r1.6UG0009020 [cytosol] R-AUM-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119273 Lysine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.6UG0009020 R-AUM-1129397 AeUmb.TA1851.r1.6UG0009020 [cytosol] R-AUM-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119283 Lysine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.6UG0009020 R-AUM-1129397 AeUmb.TA1851.r1.6UG0009020 [cytosol] R-AUM-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119295 Homoserine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0009020 R-AUM-5138500 AeUmb.TA1851.r1.6UG0009020 [plastid stroma] R-AUM-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119539 Ornithine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0009020 R-AUM-5138500 AeUmb.TA1851.r1.6UG0009020 [plastid stroma] R-AUM-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119622 Arginine biosynthesis II (acetyl cycle) none Aegilops umbellulata AeUmb.TA1851.r1.6UG0009110 R-AUM-4415055 AeUmb.TA1851.r1.6UG0009110 [cytosol] R-AUM-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-3899351 Abscisic acid (ABA) mediated signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0009110 R-AUM-4415073 phospho-AeUmb.TA1851.r1.6UG0009110 [cytosol] R-AUM-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-3899351 Abscisic acid (ABA) mediated signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0009110 R-AUM-4415055 AeUmb.TA1851.r1.6UG0009110 [cytosol] R-AUM-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9639861 Development of root hair none Aegilops umbellulata AeUmb.TA1851.r1.6UG0009180 R-AUM-1129390 AeUmb.TA1851.r1.6UG0009180 [mitochondrion] R-AUM-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119506 tyrosine degradation I none Aegilops umbellulata AeUmb.TA1851.r1.6UG0009260 R-AUM-1124935 AeUmb.TA1851.r1.6UG0009260 [cytosol] R-AUM-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119349 S-methylmethionine cycle none Aegilops umbellulata AeUmb.TA1851.r1.6UG0009360 R-AUM-9681869 AeUmb.TA1851.r1.6UG0009360 [cytosol] R-AUM-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops umbellulata AeUmb.TA1851.r1.6UG0009900 R-AUM-1123470 AeUmb.TA1851.r1.6UG0009900 [cytosol] R-AUM-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119292 Cytokinins 7-N-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0009900 R-AUM-1123470 AeUmb.TA1851.r1.6UG0009900 [cytosol] R-AUM-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119375 Cytokinins 9-N-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0009900 R-AUM-1123470 AeUmb.TA1851.r1.6UG0009900 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0010030 R-AUM-8987575 AeUmb.TA1851.r1.6UG0010030 [mitochondrial matrix] R-AUM-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119311 Glycine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.6UG0010190 R-AUM-9640783 AeUmb.TA1851.r1.6UG0010190 [nucleoplasm] R-AUM-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640760 G1 phase none Aegilops umbellulata AeUmb.TA1851.r1.6UG0010210 R-AUM-8879001 AeUmb.TA1851.r1.6UG0010210 [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.6UG0010220 R-AUM-1125341 AeUmb.TA1851.r1.6UG0010220 [cytosol] R-AUM-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119460 Isoleucine biosynthesis from threonine none Aegilops umbellulata AeUmb.TA1851.r1.6UG0010220 R-AUM-1125341 AeUmb.TA1851.r1.6UG0010220 [cytosol] R-AUM-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119600 Valine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0010460 R-AUM-6786984 AeUmb.TA1851.r1.6UG0010460 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0010460 R-AUM-6787051 AeUmb.TA1851.r1.6UG0010460 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0010590 R-AUM-9035785 AeUmb.TA1851.r1.6UG0010590 [nucleoplasm] R-AUM-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9608575 Reproductive meristem phase change none Aegilops umbellulata AeUmb.TA1851.r1.6UG0010700 R-AUM-1128745 AeUmb.TA1851.r1.6UG0010700 [plastid stroma] R-AUM-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119464 Methylerythritol phosphate pathway none Aegilops umbellulata AeUmb.TA1851.r1.6UG0010910 R-AUM-9035593 AeUmb.TA1851.r1.6UG0010910 [cytosol] R-AUM-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9035605 Regulation of seed size none Aegilops umbellulata AeUmb.TA1851.r1.6UG0010910 R-AUM-9035634 AeUmb.TA1851.r1.6UG0010910 [nucleoplasm] R-AUM-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9035605 Regulation of seed size none Aegilops umbellulata AeUmb.TA1851.r1.6UG0010910 R-AUM-9035593 AeUmb.TA1851.r1.6UG0010910 [cytosol] R-AUM-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9608575 Reproductive meristem phase change none Aegilops umbellulata AeUmb.TA1851.r1.6UG0010910 R-AUM-9035634 AeUmb.TA1851.r1.6UG0010910 [nucleoplasm] R-AUM-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9608575 Reproductive meristem phase change none Aegilops umbellulata AeUmb.TA1851.r1.6UG0011050 R-AUM-1123895 AeUmb.TA1851.r1.6UG0011050 [cytosol] R-AUM-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119334 Ethylene biosynthesis from methionine none Aegilops umbellulata AeUmb.TA1851.r1.6UG0011050 R-AUM-1123895 AeUmb.TA1851.r1.6UG0011050 [cytosol] R-AUM-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119624 Methionine salvage pathway none Aegilops umbellulata AeUmb.TA1851.r1.6UG0011070 R-AUM-9631619 AeUmb.TA1851.r1.6UG0011070 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.6UG0011190 R-AUM-9639012 AeUmb.TA1851.r1.6UG0011190 [cytosol] R-AUM-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119434 Phytic acid biosynthesis (lipid-independent) none Aegilops umbellulata AeUmb.TA1851.r1.6UG0011220 R-AUM-9927759 AeUmb.TA1851.r1.6UG0011220 [nucleoplasm] R-AUM-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934036 Long day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.6UG0011630 R-AUM-1123077 AeUmb.TA1851.r1.6UG0011630 [cytosol] R-AUM-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119458 Glutamate degradation none Aegilops umbellulata AeUmb.TA1851.r1.6UG0011660 R-AUM-8933842 AeUmb.TA1851.r1.6UG0011660 [cytosol] R-AUM-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8933811 Circadian rhythm none Aegilops umbellulata AeUmb.TA1851.r1.6UG0011660 R-AUM-8933843 AeUmb.TA1851.r1.6UG0011660 [nucleoplasm] R-AUM-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8933811 Circadian rhythm none Aegilops umbellulata AeUmb.TA1851.r1.6UG0011810 R-AUM-1125460 AeUmb.TA1851.r1.6UG0011810 [cytosol] R-AUM-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119452 Galactose degradation II none Aegilops umbellulata AeUmb.TA1851.r1.6UG0011810 R-AUM-1125460 AeUmb.TA1851.r1.6UG0011810 [cytosol] R-AUM-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119563 UDP-D-xylose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0011810 R-AUM-1125460 AeUmb.TA1851.r1.6UG0011810 [cytosol] R-AUM-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops umbellulata AeUmb.TA1851.r1.6UG0012020 R-AUM-1127031-2 AeUmb.TA1851.r1.6UG0012020 [cytosol] R-AUM-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119460 Isoleucine biosynthesis from threonine none Aegilops umbellulata AeUmb.TA1851.r1.6UG0012080 R-AUM-1125564 AeUmb.TA1851.r1.6UG0012080 [cytosol] R-AUM-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119291 Nitrate assimilation none Aegilops umbellulata AeUmb.TA1851.r1.6UG0012080 R-AUM-1125564 AeUmb.TA1851.r1.6UG0012080 [cytosol] R-AUM-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119293 Glutamine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.6UG0012080 R-AUM-1125564 AeUmb.TA1851.r1.6UG0012080 [cytosol] R-AUM-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119443 Ammonia assimilation cycle none Aegilops umbellulata AeUmb.TA1851.r1.6UG0012090 R-AUM-1128632 AeUmb.TA1851.r1.6UG0012090 [cytosol] R-AUM-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119465 Sucrose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0012090 R-AUM-1128632 AeUmb.TA1851.r1.6UG0012090 [cytosol] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0012310 R-AUM-5632316 AeUmb.TA1851.r1.6UG0012310 [cytosol] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0012490 R-AUM-1126513 AeUmb.TA1851.r1.6UG0012490 [cytosol] R-AUM-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119332 Jasmonic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0012520 R-AUM-5679455 AeUmb.TA1851.r1.6UG0012520 [nucleoplasm] R-AUM-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5679411 Gibberellin signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0012520 R-AUM-6787020 AeUmb.TA1851.r1.6UG0012520 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0012550 R-AUM-5654829 AeUmb.TA1851.r1.6UG0012550 [nucleoplasm] R-AUM-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Aegilops umbellulata AeUmb.TA1851.r1.6UG0012710 R-AUM-1124285 AeUmb.TA1851.r1.6UG0012710 [cytosol] R-AUM-1119284 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119284 Coumarin biosynthesis (via 2-coumarate) none Aegilops umbellulata AeUmb.TA1851.r1.6UG0013980 R-AUM-9618156-2 AeUmb.TA1851.r1.6UG0013980 [plasma membrane] R-AUM-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9618218 Arsenic uptake and detoxification none Aegilops umbellulata AeUmb.TA1851.r1.6UG0014010 R-AUM-6787127 AeUmb.TA1851.r1.6UG0014010 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0014010 R-AUM-6787052 AeUmb.TA1851.r1.6UG0014010 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0014660 R-AUM-9622269 AeUmb.TA1851.r1.6UG0014660 [plasma membrane] R-AUM-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9035605 Regulation of seed size none Aegilops umbellulata AeUmb.TA1851.r1.6UG0014710 R-AUM-9025728-2 AeUmb.TA1851.r1.6UG0014710 [plasma membrane] R-AUM-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9025727 Iron uptake and transport in root vascular system none Aegilops umbellulata AeUmb.TA1851.r1.6UG0014720 R-AUM-9025728 AeUmb.TA1851.r1.6UG0014720 [plasma membrane] R-AUM-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9025727 Iron uptake and transport in root vascular system none Aegilops umbellulata AeUmb.TA1851.r1.6UG0014730 R-AUM-6788149 AeUmb.TA1851.r1.6UG0014730 [cytosol] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0015850 R-AUM-1129078 AeUmb.TA1851.r1.6UG0015850 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0016130 R-AUM-6787144 AeUmb.TA1851.r1.6UG0016130 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0016550 R-AUM-1128626 AeUmb.TA1851.r1.6UG0016550 [cytosol] R-AUM-1119581 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119581 Thiosulfate disproportionation III (rhodanese) none Aegilops umbellulata AeUmb.TA1851.r1.6UG0016810 R-AUM-9618085 AeUmb.TA1851.r1.6UG0016810 [cytosol] R-AUM-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9618218 Arsenic uptake and detoxification none Aegilops umbellulata AeUmb.TA1851.r1.6UG0017000 R-AUM-8934084 AeUmb.TA1851.r1.6UG0017000 [nucleoplasm] R-AUM-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9928995 Drought escape (DE) via ABA-dependent pathway none Aegilops umbellulata AeUmb.TA1851.r1.6UG0017010 R-AUM-5633387 AeUmb.TA1851.r1.6UG0017010 [mitochondrial matrix] R-AUM-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119445 Beta-alanine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.6UG0017210 R-AUM-9920292 AeUmb.TA1851.r1.6UG0017210 [nucleoplasm] R-AUM-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934108 Short day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.6UG0017320 R-AUM-1127738 AeUmb.TA1851.r1.6UG0017320 [cytosol] R-AUM-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119273 Lysine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.6UG0017320 R-AUM-1127738 AeUmb.TA1851.r1.6UG0017320 [cytosol] R-AUM-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119283 Lysine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.6UG0017320 R-AUM-5606514 AeUmb.TA1851.r1.6UG0017320 [plastid stroma] R-AUM-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119419 Lysine biosynthesis VI none Aegilops umbellulata AeUmb.TA1851.r1.6UG0017400 R-AUM-8933832 AeUmb.TA1851.r1.6UG0017400 [nucleoplasm] R-AUM-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8933811 Circadian rhythm none Aegilops umbellulata AeUmb.TA1851.r1.6UG0017660 R-AUM-6787224 AeUmb.TA1851.r1.6UG0017660 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0017660 R-AUM-6787146 AeUmb.TA1851.r1.6UG0017660 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0018210 R-AUM-1130281 AeUmb.TA1851.r1.6UG0018210 [cytosol] R-AUM-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops umbellulata AeUmb.TA1851.r1.6UG0019090 R-AUM-9675439 AeUmb.TA1851.r1.6UG0019090 [mitochondrial matrix] R-AUM-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030654 Primary root development none Aegilops umbellulata AeUmb.TA1851.r1.6UG0019380 R-AUM-8986777-4 AeUmb.TA1851.r1.6UG0019380 [extracellular region] R-AUM-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8986768 Anther and pollen development none Aegilops umbellulata AeUmb.TA1851.r1.6UG0019460 R-AUM-1122347 AeUmb.TA1851.r1.6UG0019460 [cytosol] R-AUM-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119384 NAD biosynthesis I (from aspartate) none Aegilops umbellulata AeUmb.TA1851.r1.6UG0019590 R-AUM-8986777 AeUmb.TA1851.r1.6UG0019590 [extracellular region] R-AUM-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8986768 Anther and pollen development none Aegilops umbellulata AeUmb.TA1851.r1.6UG0019600 R-AUM-8986777-2 AeUmb.TA1851.r1.6UG0019600 [extracellular region] R-AUM-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8986768 Anther and pollen development none Aegilops umbellulata AeUmb.TA1851.r1.6UG0019610 R-AUM-8986777-3 AeUmb.TA1851.r1.6UG0019610 [extracellular region] R-AUM-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8986768 Anther and pollen development none Aegilops umbellulata AeUmb.TA1851.r1.6UG0019810 R-AUM-9645891 AeUmb.TA1851.r1.6UG0019810 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.6UG0020030 R-AUM-1130162 AeUmb.TA1851.r1.6UG0020030 [chloroplast] R-AUM-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119494 Tryptophan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0020040 R-AUM-9025712-2 AeUmb.TA1851.r1.6UG0020040 [cytosol] R-AUM-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9025754 Mugineic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0020770 R-AUM-1124520 AeUmb.TA1851.r1.6UG0020770 [cytosol] R-AUM-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119278 PRPP biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.6UG0021290 R-AUM-1124939 AeUmb.TA1851.r1.6UG0021290 [cytosol] R-AUM-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119540 Leucine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0021480 R-AUM-9640697 phospho-AeUmb.TA1851.r1.6UG0021480 [nucleoplasm] R-AUM-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640760 G1 phase none Aegilops umbellulata AeUmb.TA1851.r1.6UG0021480 R-AUM-9640660 AeUmb.TA1851.r1.6UG0021480 [nucleoplasm] R-AUM-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640760 G1 phase none Aegilops umbellulata AeUmb.TA1851.r1.6UG0021480 R-AUM-9640697 phospho-AeUmb.TA1851.r1.6UG0021480 [nucleoplasm] R-AUM-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640887 G1/S transition none Aegilops umbellulata AeUmb.TA1851.r1.6UG0021510 R-AUM-1130088 AeUmb.TA1851.r1.6UG0021510 [plasma membrane] R-AUM-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119314 Cellulose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0022040 R-AUM-8854445 AeUmb.TA1851.r1.6UG0022040 [cytosol] R-AUM-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119276 Choline biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.6UG0022170 R-AUM-3240748 AeUmb.TA1851.r1.6UG0022170 [cytosol] R-AUM-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Aegilops umbellulata AeUmb.TA1851.r1.6UG0022180 R-AUM-8986723 AeUmb.TA1851.r1.6UG0022180 [nucleoplasm] R-AUM-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8986768 Anther and pollen development none Aegilops umbellulata AeUmb.TA1851.r1.6UG0022310 R-AUM-1114864 AeUmb.TA1851.r1.6UG0022310 [cytosol] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0022460 R-AUM-9675293 AeUmb.TA1851.r1.6UG0022460 [nucleoplasm] R-AUM-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030557 Lateral root initiation none Aegilops umbellulata AeUmb.TA1851.r1.6UG0022960 R-AUM-1127705 AeUmb.TA1851.r1.6UG0022960 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.6UG0025740 R-AUM-9611864 AeUmb.TA1851.r1.6UG0025740 [mitochondrial matrix] R-AUM-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119479 Valine degradation none Aegilops umbellulata AeUmb.TA1851.r1.6UG0026550 R-AUM-1126373-2 AeUmb.TA1851.r1.6UG0026550 [cytosol] R-AUM-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0027130 R-AUM-1126888 AeUmb.TA1851.r1.6UG0027130 [cytosol] R-AUM-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119360 Fructan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0027140 R-AUM-9025463 AeUmb.TA1851.r1.6UG0027140 [endoplasmic reticulum membrane] R-AUM-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119325 Sphingolipid metabolism none Aegilops umbellulata AeUmb.TA1851.r1.6UG0027830 R-AUM-1127442 AeUmb.TA1851.r1.6UG0027830 [cytosol] R-AUM-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119281 Aspartate biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.6UG0027830 R-AUM-5632001 AeUmb.TA1851.r1.6UG0027830 [plastid stroma] R-AUM-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119553 Asparagine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0028000 R-AUM-1127880-2 AeUmb.TA1851.r1.6UG0028000 [cytosol] R-AUM-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119291 Nitrate assimilation none Aegilops umbellulata AeUmb.TA1851.r1.6UG0028280 R-AUM-5633332 AeUmb.TA1851.r1.6UG0028280 [plastid stroma] R-AUM-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5633340 Citrulline-nitric oxide cycle none Aegilops umbellulata AeUmb.TA1851.r1.6UG0028360 R-AUM-1128178 AeUmb.TA1851.r1.6UG0028360 [cytosol] R-AUM-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119322 Leucodelphinidin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0028360 R-AUM-1128178 AeUmb.TA1851.r1.6UG0028360 [cytosol] R-AUM-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0028360 R-AUM-9609575 AeUmb.TA1851.r1.6UG0028360 [endoplasmic reticulum membrane] R-AUM-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9609573 Tricin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0028490 R-AUM-1124291-2 AeUmb.TA1851.r1.6UG0028490 [cytosol] R-AUM-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0028490 R-AUM-1124291-2 AeUmb.TA1851.r1.6UG0028490 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0028490 R-AUM-1124291-2 AeUmb.TA1851.r1.6UG0028490 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.6UG0028940 R-AUM-9609608-7 AeUmb.TA1851.r1.6UG0028940 [cytosol] R-AUM-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9609573 Tricin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0028940 R-AUM-9916171-7 OsOMT [cytosol] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.6UG0028940 R-AUM-9916312-7 OsOMT [nucleoplasm] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.6UG0029170 R-AUM-1130078 AeUmb.TA1851.r1.6UG0029170 [cytosol] R-AUM-1119440 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119440 Anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside) none Aegilops umbellulata AeUmb.TA1851.r1.6UG0029170 R-AUM-2672102 AeUmb.TA1851.r1.6UG0029170 [cytosol] R-AUM-1119514 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119514 Anthocyanin biosynthesis (delphinidin 3-O-glucoside) none Aegilops umbellulata AeUmb.TA1851.r1.6UG0029540 R-AUM-8858085 AeUmb.TA1851.r1.6UG0029540 [plasma membrane] R-AUM-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8858053 Polar auxin transport none Aegilops umbellulata AeUmb.TA1851.r1.6UG0029540 R-AUM-8858085 AeUmb.TA1851.r1.6UG0029540 [plasma membrane] R-AUM-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924494 Gravity sensing and statolith sedimentation none Aegilops umbellulata AeUmb.TA1851.r1.6UG0029540 R-AUM-9928298 PIN2 [endosome] R-AUM-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924494 Gravity sensing and statolith sedimentation none Aegilops umbellulata AeUmb.TA1851.r1.6UG0029720 R-AUM-1124540-2 AeUmb.TA1851.r1.6UG0029720 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0029730 R-AUM-1124540 AeUmb.TA1851.r1.6UG0029730 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0030540 R-AUM-1125014 AeUmb.TA1851.r1.6UG0030540 [cytosol] R-AUM-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops umbellulata AeUmb.TA1851.r1.6UG0031250 R-AUM-1250419 AeUmb.TA1851.r1.6UG0031250 [cytosol] R-AUM-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119374 Abscisic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0031250 R-AUM-1129637 AeUmb.TA1851.r1.6UG0031250 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.6UG0031260 R-AUM-1250419-2 AeUmb.TA1851.r1.6UG0031260 [cytosol] R-AUM-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119374 Abscisic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0031260 R-AUM-1129637-2 AeUmb.TA1851.r1.6UG0031260 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.6UG0032370 R-AUM-1126892 AeUmb.TA1851.r1.6UG0032370 [cytosol] R-AUM-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119353 Linear furanocoumarin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0034890 R-AUM-9918274 SBE1 [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0034890 R-AUM-9626342 AeUmb.TA1851.r1.6UG0034890 [plastid stroma] R-AUM-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9626305 Regulatory network of nutrient accumulation none Aegilops umbellulata AeUmb.TA1851.r1.6UG0035420 R-AUM-1128244-3 AeUmb.TA1851.r1.6UG0035420 [chloroplast] R-AUM-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119348 Ent-kaurene biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0035440 R-AUM-9609608 AeUmb.TA1851.r1.6UG0035440 [cytosol] R-AUM-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9609573 Tricin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0035440 R-AUM-9916171 OsOMT [cytosol] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.6UG0035440 R-AUM-9916312 OsOMT [nucleoplasm] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.6UG0035450 R-AUM-9609608-8 AeUmb.TA1851.r1.6UG0035450 [cytosol] R-AUM-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9609573 Tricin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0035450 R-AUM-9916171-8 OsOMT [cytosol] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.6UG0035450 R-AUM-9916312-8 OsOMT [nucleoplasm] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.6UG0035460 R-AUM-1128244-2 AeUmb.TA1851.r1.6UG0035460 [chloroplast] R-AUM-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119348 Ent-kaurene biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0035860 R-AUM-1124861 AeUmb.TA1851.r1.6UG0035860 [plastid stroma] R-AUM-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119449 Carotenoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0036110 R-AUM-9916305-2 AeUmb.TA1851.r1.6UG0036110 [nucleoplasm] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.6UG0036380 R-AUM-9609608-6 AeUmb.TA1851.r1.6UG0036380 [cytosol] R-AUM-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9609573 Tricin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0036380 R-AUM-9916171-6 OsOMT [cytosol] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.6UG0036380 R-AUM-9916312-6 OsOMT [nucleoplasm] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.6UG0037110 R-AUM-1127324 AeUmb.TA1851.r1.6UG0037110 [cytosol] R-AUM-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119624 Methionine salvage pathway none Aegilops umbellulata AeUmb.TA1851.r1.6UG0037360 R-AUM-8986682-2 AeUmb.TA1851.r1.6UG0037360 [extracellular region] R-AUM-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8986768 Anther and pollen development none Aegilops umbellulata AeUmb.TA1851.r1.6UG0037410 R-AUM-8986682 AeUmb.TA1851.r1.6UG0037410 [extracellular region] R-AUM-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8986768 Anther and pollen development none Aegilops umbellulata AeUmb.TA1851.r1.6UG0037540 R-AUM-5608169 AeUmb.TA1851.r1.6UG0037540 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0038710 R-AUM-1129851-2 AeUmb.TA1851.r1.6UG0038710 [mitochondrial matrix] R-AUM-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119533 TCA cycle (plant) none Aegilops umbellulata AeUmb.TA1851.r1.6UG0038710 R-AUM-1129851-2 AeUmb.TA1851.r1.6UG0038710 [mitochondrial matrix] R-AUM-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119540 Leucine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0039040 R-AUM-9025224 AeUmb.TA1851.r1.6UG0039040 [endoplasmic reticulum lumen] R-AUM-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119502 Allantoin degradation none Aegilops umbellulata AeUmb.TA1851.r1.6UG0039120 R-AUM-1127597 AeUmb.TA1851.r1.6UG0039120 [cytosol] R-AUM-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119615 Mevalonate pathway none Aegilops umbellulata AeUmb.TA1851.r1.6UG0039310 R-AUM-1125556-2 AeUmb.TA1851.r1.6UG0039310 [cytosol] R-AUM-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119410 Ascorbate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0039310 R-AUM-1125556-2 AeUmb.TA1851.r1.6UG0039310 [cytosol] R-AUM-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119628 GDP-mannose metabolism none Aegilops umbellulata AeUmb.TA1851.r1.6UG0039370 R-AUM-1125670 AeUmb.TA1851.r1.6UG0039370 [cytosol] R-AUM-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119393 Asparagine degradation I none Aegilops umbellulata AeUmb.TA1851.r1.6UG0040410 R-AUM-1122433 AeUmb.TA1851.r1.6UG0040410 [mitochondrial inner membrane] R-AUM-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119533 TCA cycle (plant) none Aegilops umbellulata AeUmb.TA1851.r1.6UG0040820 R-AUM-5654750 AeUmb.TA1851.r1.6UG0040820 [cytosol] R-AUM-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119393 Asparagine degradation I none Aegilops umbellulata AeUmb.TA1851.r1.6UG0040860 R-AUM-5608213 AeUmb.TA1851.r1.6UG0040860 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0041010 R-AUM-4723663 AeUmb.TA1851.r1.6UG0041010 [plastid stroma] R-AUM-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119464 Methylerythritol phosphate pathway none Aegilops umbellulata AeUmb.TA1851.r1.6UG0041010 R-AUM-1126491 AeUmb.TA1851.r1.6UG0041010 [cytosol] R-AUM-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119594 Pyridoxal 5'-phosphate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0041010 R-AUM-1126491 AeUmb.TA1851.r1.6UG0041010 [cytosol] R-AUM-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119629 Thiamine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0041240 R-AUM-1127599 AeUmb.TA1851.r1.6UG0041240 [cytosol] R-AUM-1119388 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119388 IAA biosynthesis VI (via indole-3-acetamide) none Aegilops umbellulata AeUmb.TA1851.r1.6UG0041650 R-AUM-1122560 AeUmb.TA1851.r1.6UG0041650 [cytosol] R-AUM-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119331 Cysteine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.6UG0041680 R-AUM-1129175 AeUmb.TA1851.r1.6UG0041680 [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0041990 R-AUM-8854108 AeUmb.TA1851.r1.6UG0041990 [cytosol] R-AUM-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119556 Choline biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.6UG0042140 R-AUM-1124037 AeUmb.TA1851.r1.6UG0042140 [mitochondrial matrix] R-AUM-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119289 Arginine degradation none Aegilops umbellulata AeUmb.TA1851.r1.6UG0042210 R-AUM-4415101 AeUmb.TA1851.r1.6UG0042210 [cytosol] R-AUM-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-3899351 Abscisic acid (ABA) mediated signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0042350 R-AUM-9675857 AeUmb.TA1851.r1.6UG0042350 [nucleoplasm] R-AUM-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675782 Maturation none Aegilops umbellulata AeUmb.TA1851.r1.6UG0042490 R-AUM-1127346 AeUmb.TA1851.r1.6UG0042490 [cytosol] R-AUM-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119316 Phenylpropanoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0042580 R-AUM-9920284 AeUmb.TA1851.r1.6UG0042580 [nucleoplasm] R-AUM-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934108 Short day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.6UG0042690 R-AUM-8879034-2 HVA1 homolog [vacuolar lumen] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.6UG0042700 R-AUM-8879034-3 HVA1 homolog [vacuolar lumen] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.6UG0042720 R-AUM-8879034-4 HVA1 homolog [vacuolar lumen] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.6UG0043190 R-AUM-6786926-6 AeUmb.TA1851.r1.6UG0043190 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0043260 R-AUM-8854127-2 AeUmb.TA1851.r1.6UG0043260 [cytosol] R-AUM-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119556 Choline biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.6UG0043270 R-AUM-8854127 AeUmb.TA1851.r1.6UG0043270 [cytosol] R-AUM-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119556 Choline biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.6UG0043310 R-AUM-1122242 AeUmb.TA1851.r1.6UG0043310 [cytosol] R-AUM-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119267 Phenylalanine degradation III none Aegilops umbellulata AeUmb.TA1851.r1.6UG0043320 R-AUM-1122242-3 AeUmb.TA1851.r1.6UG0043320 [cytosol] R-AUM-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119267 Phenylalanine degradation III none Aegilops umbellulata AeUmb.TA1851.r1.6UG0043480 R-AUM-1123935 AeUmb.TA1851.r1.6UG0043480 [cytosol] R-AUM-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119262 Threonine biosynthesis from homoserine none Aegilops umbellulata AeUmb.TA1851.r1.6UG0043610 R-AUM-1125532 AeUmb.TA1851.r1.6UG0043610 [cytosol] R-AUM-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119276 Choline biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.6UG0044390 R-AUM-9826667 AeUmb.TA1851.r1.6UG0044390 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.6UG0044560 R-AUM-9025372 AeUmb.TA1851.r1.6UG0044560 [endoplasmic reticulum membrane] R-AUM-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119402 Phospholipid biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.6UG0044670 R-AUM-1122351-2 AeUmb.TA1851.r1.6UG0044670 [cytosol] R-AUM-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119354 Asparagine biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.6UG0044670 R-AUM-5633281-2 AeUmb.TA1851.r1.6UG0044670 [cytosol] R-AUM-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119495 Citrulline biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0044670 R-AUM-1122351-2 AeUmb.TA1851.r1.6UG0044670 [cytosol] R-AUM-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119553 Asparagine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0044890 R-AUM-9675820 AeUmb.TA1851.r1.6UG0044890 [nucleoplasm] R-AUM-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675824 DNA replication Initiation none Aegilops umbellulata AeUmb.TA1851.r1.6UG0044900 R-AUM-4723663-2 AeUmb.TA1851.r1.6UG0044900 [plastid stroma] R-AUM-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119464 Methylerythritol phosphate pathway none Aegilops umbellulata AeUmb.TA1851.r1.6UG0044900 R-AUM-1126491-2 AeUmb.TA1851.r1.6UG0044900 [cytosol] R-AUM-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119594 Pyridoxal 5'-phosphate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0044900 R-AUM-1126491-2 AeUmb.TA1851.r1.6UG0044900 [cytosol] R-AUM-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119629 Thiamine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0045390 R-AUM-6786999 AeUmb.TA1851.r1.6UG0045390 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0045450 R-AUM-1128214 AeUmb.TA1851.r1.6UG0045450 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0045500 R-AUM-5654957 AeUmb.TA1851.r1.6UG0045500 [Golgi lumen] R-AUM-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5654909 Xylan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0045740 R-AUM-1129926 AeUmb.TA1851.r1.6UG0045740 [cytosol] R-AUM-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Aegilops umbellulata AeUmb.TA1851.r1.6UG0046070 R-AUM-5608184 AeUmb.TA1851.r1.6UG0046070 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0046660 R-AUM-9682506 AeUmb.TA1851.r1.6UG0046660 [cytosol] R-AUM-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119410 Ascorbate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0046880 R-AUM-9618186-2 AeUmb.TA1851.r1.6UG0046880 [plant-type vacuole membrane] R-AUM-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9618218 Arsenic uptake and detoxification none Aegilops umbellulata AeUmb.TA1851.r1.6UG0047290 R-AUM-8933788 AeUmb.TA1851.r1.6UG0047290 [nucleoplasm] R-AUM-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8933811 Circadian rhythm none Aegilops umbellulata AeUmb.TA1851.r1.6UG0047430 R-AUM-1126157 AeUmb.TA1851.r1.6UG0047430 [cytosol] R-AUM-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119460 Isoleucine biosynthesis from threonine none Aegilops umbellulata AeUmb.TA1851.r1.6UG0047430 R-AUM-1126157 AeUmb.TA1851.r1.6UG0047430 [cytosol] R-AUM-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119600 Valine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0047520 R-AUM-1128961 AeUmb.TA1851.r1.6UG0047520 [mitochondrial matrix] R-AUM-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119533 TCA cycle (plant) none Aegilops umbellulata AeUmb.TA1851.r1.6UG0047730 R-AUM-1126713 AeUmb.TA1851.r1.6UG0047730 [endosome] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0047730 R-AUM-5679319 AeUmb.TA1851.r1.6UG0047730 [plasma membrane] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0047740 R-AUM-9025699-2 AeUmb.TA1851.r1.6UG0047740 [plasma membrane] R-AUM-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8858053 Polar auxin transport none Aegilops umbellulata AeUmb.TA1851.r1.6UG0047780 R-AUM-1127922 AeUmb.TA1851.r1.6UG0047780 [cytosol] R-AUM-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119370 Sterol biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0047970 R-AUM-1127414 AeUmb.TA1851.r1.6UG0047970 [cytosol] R-AUM-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119265 Tetrahydrofolate biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.6UG0048210 R-AUM-1127562 AeUmb.TA1851.r1.6UG0048210 [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0048390 R-AUM-1123482 AeUmb.TA1851.r1.6UG0048390 [plastid stroma] R-AUM-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119367 Polyisoprenoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0048530 R-AUM-1122351 AeUmb.TA1851.r1.6UG0048530 [cytosol] R-AUM-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119354 Asparagine biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.6UG0048530 R-AUM-5633281 AeUmb.TA1851.r1.6UG0048530 [cytosol] R-AUM-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119495 Citrulline biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0048530 R-AUM-1122351 AeUmb.TA1851.r1.6UG0048530 [cytosol] R-AUM-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119553 Asparagine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0048870 R-AUM-6787184 AeUmb.TA1851.r1.6UG0048870 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0049180 R-AUM-1128354 AeUmb.TA1851.r1.6UG0049180 [chloroplast] R-AUM-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119494 Tryptophan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0050210 R-AUM-3899348 AeUmb.TA1851.r1.6UG0050210 [cytosol] R-AUM-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-3899351 Abscisic acid (ABA) mediated signaling none Aegilops umbellulata AeUmb.TA1851.r1.6UG0050210 R-AUM-3899348 AeUmb.TA1851.r1.6UG0050210 [cytosol] R-AUM-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9639861 Development of root hair none Aegilops umbellulata AeUmb.TA1851.r1.6UG0050270 R-AUM-1124404 AeUmb.TA1851.r1.6UG0050270 [cytosol] R-AUM-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119322 Leucodelphinidin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0050270 R-AUM-1124404 AeUmb.TA1851.r1.6UG0050270 [cytosol] R-AUM-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.6UG0050370 R-AUM-8933860 AeUmb.TA1851.r1.6UG0050370 [nucleoplasm] R-AUM-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8933811 Circadian rhythm none Aegilops umbellulata AeUmb.TA1851.r1.6UG0050370 R-AUM-8933860 AeUmb.TA1851.r1.6UG0050370 [nucleoplasm] R-AUM-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9928946 Drought escape (DE) via ABA-independent pathway none Aegilops umbellulata AeUmb.TA1851.r1.6UG0050480 R-AUM-1123746 AeUmb.TA1851.r1.6UG0050480 [cytosol] R-AUM-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119586 Cyanate degradation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0000030 R-AUM-1123046-2 AeUmb.TA1851.r1.7UG0000030 [cytosol] R-AUM-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119386 UDP-N-acetylgalactosamine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0001030 R-AUM-5149644 AeUmb.TA1851.r1.7UG0001030 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.7UG0001130 R-AUM-9826604 AeUmb.TA1851.r1.7UG0001130 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.7UG0001440 R-AUM-1128334 AeUmb.TA1851.r1.7UG0001440 [mitochondrial matrix] R-AUM-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119337 Proline degradation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0001800 R-AUM-9640716 AeUmb.TA1851.r1.7UG0001800 [nucleoplasm] R-AUM-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030654 Primary root development none Aegilops umbellulata AeUmb.TA1851.r1.7UG0001800 R-AUM-9640716 AeUmb.TA1851.r1.7UG0001800 [nucleoplasm] R-AUM-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640882 Assembly of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.7UG0001800 R-AUM-9640716 AeUmb.TA1851.r1.7UG0001800 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.7UG0002100 R-AUM-9618197 AeUmb.TA1851.r1.7UG0002100 [plasma membrane] R-AUM-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9618218 Arsenic uptake and detoxification none Aegilops umbellulata AeUmb.TA1851.r1.7UG0002820 R-AUM-1129082-2 AeUmb.TA1851.r1.7UG0002820 [mitochondrial matrix] R-AUM-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119445 Beta-alanine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.7UG0003180 R-AUM-1130152 AeUmb.TA1851.r1.7UG0003180 [cytosol] R-AUM-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119394 Pantothenate and coenzyme A biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.7UG0004170 R-AUM-8986638 AeUmb.TA1851.r1.7UG0004170 [COPII-coated ER to Golgi transport vesicle] R-AUM-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8986768 Anther and pollen development none Aegilops umbellulata AeUmb.TA1851.r1.7UG0004320 R-AUM-9658611 AeUmb.TA1851.r1.7UG0004320 [plastid stroma] R-AUM-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119263 Arginine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0004320 R-AUM-9658611 AeUmb.TA1851.r1.7UG0004320 [plastid stroma] R-AUM-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119539 Ornithine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0004320 R-AUM-9658611 AeUmb.TA1851.r1.7UG0004320 [plastid stroma] R-AUM-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119622 Arginine biosynthesis II (acetyl cycle) none Aegilops umbellulata AeUmb.TA1851.r1.7UG0004480 R-AUM-1127414-2 AeUmb.TA1851.r1.7UG0004480 [cytosol] R-AUM-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119265 Tetrahydrofolate biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0004570 R-AUM-8987571 AeUmb.TA1851.r1.7UG0004570 [peroxisomal matrix] R-AUM-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119312 Photorespiration none Aegilops umbellulata AeUmb.TA1851.r1.7UG0004860 R-AUM-6786987 AeUmb.TA1851.r1.7UG0004860 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0004870 R-AUM-1126107 AeUmb.TA1851.r1.7UG0004870 [cytosol] R-AUM-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119332 Jasmonic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0004870 R-AUM-1126107 AeUmb.TA1851.r1.7UG0004870 [cytosol] R-AUM-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119618 13-LOX and 13-HPL pathway none Aegilops umbellulata AeUmb.TA1851.r1.7UG0004900 R-AUM-9030976 AeUmb.TA1851.r1.7UG0004900 [nucleoplasm] R-AUM-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5654828 Strigolactone signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0004900 R-AUM-9030976 AeUmb.TA1851.r1.7UG0004900 [nucleoplasm] R-AUM-9030908 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030908 Underwater shoot and internode elongation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0004900 R-AUM-9030976 AeUmb.TA1851.r1.7UG0004900 [nucleoplasm] R-AUM-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9035605 Regulation of seed size none Aegilops umbellulata AeUmb.TA1851.r1.7UG0004900 R-AUM-9035631 AeUmb.TA1851.r1.7UG0004900 [cytosol] R-AUM-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9035605 Regulation of seed size none Aegilops umbellulata AeUmb.TA1851.r1.7UG0004900 R-AUM-9030976 AeUmb.TA1851.r1.7UG0004900 [nucleoplasm] R-AUM-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9608575 Reproductive meristem phase change none Aegilops umbellulata AeUmb.TA1851.r1.7UG0004900 R-AUM-9035631 AeUmb.TA1851.r1.7UG0004900 [cytosol] R-AUM-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9608575 Reproductive meristem phase change none Aegilops umbellulata AeUmb.TA1851.r1.7UG0005200 R-AUM-1124496 AeUmb.TA1851.r1.7UG0005200 [cytosol] R-AUM-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119615 Mevalonate pathway none Aegilops umbellulata AeUmb.TA1851.r1.7UG0005500 R-AUM-9918265 ISA1 [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0005500 R-AUM-9626527 AeUmb.TA1851.r1.7UG0005500 [plastid stroma] R-AUM-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9626305 Regulatory network of nutrient accumulation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0005720 R-AUM-1124231 AeUmb.TA1851.r1.7UG0005720 [cytosol] R-AUM-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119389 Phenylalanine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0006310 R-AUM-1129068 AeUmb.TA1851.r1.7UG0006310 [cytosol] R-AUM-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119460 Isoleucine biosynthesis from threonine none Aegilops umbellulata AeUmb.TA1851.r1.7UG0006310 R-AUM-1129068 AeUmb.TA1851.r1.7UG0006310 [cytosol] R-AUM-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119600 Valine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0006380 R-AUM-1124056 AeUmb.TA1851.r1.7UG0006380 [cytosol] R-AUM-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119394 Pantothenate and coenzyme A biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.7UG0006540 R-AUM-9035600 AeUmb.TA1851.r1.7UG0006540 [cytosol] R-AUM-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9035605 Regulation of seed size none Aegilops umbellulata AeUmb.TA1851.r1.7UG0006540 R-AUM-9035669 AeUmb.TA1851.r1.7UG0006540 [nucleoplasm] R-AUM-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9035605 Regulation of seed size none Aegilops umbellulata AeUmb.TA1851.r1.7UG0006580 R-AUM-4827081 AeUmb.TA1851.r1.7UG0006580 [plastid stroma] R-AUM-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-4827054 Tetrapyrrole biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0007000 R-AUM-9611549 phospho-phosphorylated-CERK1 [plasma membrane] R-AUM-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops umbellulata AeUmb.TA1851.r1.7UG0007000 R-AUM-9611466 CERK1 [plasma membrane] R-AUM-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops umbellulata AeUmb.TA1851.r1.7UG0007020 R-AUM-9640763 AeUmb.TA1851.r1.7UG0007020 [nucleoplasm] R-AUM-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640887 G1/S transition none Aegilops umbellulata AeUmb.TA1851.r1.7UG0007020 R-AUM-9640885 phospho-AeUmb.TA1851.r1.7UG0007020 [nucleoplasm] R-AUM-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640887 G1/S transition none Aegilops umbellulata AeUmb.TA1851.r1.7UG0007050 R-AUM-1127254 AeUmb.TA1851.r1.7UG0007050 [cytosol] R-AUM-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119317 Spermine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0007050 R-AUM-1127254 AeUmb.TA1851.r1.7UG0007050 [cytosol] R-AUM-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119343 Spermidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0007060 R-AUM-1127254-2 AeUmb.TA1851.r1.7UG0007060 [cytosol] R-AUM-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119317 Spermine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0007060 R-AUM-1127254-2 AeUmb.TA1851.r1.7UG0007060 [cytosol] R-AUM-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119343 Spermidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0007230 R-AUM-1124791 AeUmb.TA1851.r1.7UG0007230 [cytosol] R-AUM-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119610 Biotin biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.7UG0007450 R-AUM-1130277 AeUmb.TA1851.r1.7UG0007450 [cytosol] R-AUM-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119615 Mevalonate pathway none Aegilops umbellulata AeUmb.TA1851.r1.7UG0007840 R-AUM-1123786 AeUmb.TA1851.r1.7UG0007840 R-AUM-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119403 Removal of superoxide radicals none Aegilops umbellulata AeUmb.TA1851.r1.7UG0008200 R-AUM-1127357 AeUmb.TA1851.r1.7UG0008200 [cytosol] R-AUM-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119273 Lysine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0008200 R-AUM-1127357 AeUmb.TA1851.r1.7UG0008200 [cytosol] R-AUM-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119283 Lysine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.7UG0008650 R-AUM-5632174 AeUmb.TA1851.r1.7UG0008650 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0008650 R-AUM-5632174 AeUmb.TA1851.r1.7UG0008650 [nucleoplasm] R-AUM-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5654828 Strigolactone signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0008650 R-AUM-5632174 AeUmb.TA1851.r1.7UG0008650 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0008650 R-AUM-5632174 AeUmb.TA1851.r1.7UG0008650 [nucleoplasm] R-AUM-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9608575 Reproductive meristem phase change none Aegilops umbellulata AeUmb.TA1851.r1.7UG0008700 R-AUM-1122818 AeUmb.TA1851.r1.7UG0008700 [cytosol] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0008770 R-AUM-5632192 AeUmb.TA1851.r1.7UG0008770 [cytosol] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0009010 R-AUM-9918175 AeUmb.TA1851.r1.7UG0009010 [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0009090 R-AUM-1126828 AeUmb.TA1851.r1.7UG0009090 [plastid] R-AUM-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119403 Removal of superoxide radicals none Aegilops umbellulata AeUmb.TA1851.r1.7UG0009850 R-AUM-1127733 AeUmb.TA1851.r1.7UG0009850 [cytosol] R-AUM-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119460 Isoleucine biosynthesis from threonine none Aegilops umbellulata AeUmb.TA1851.r1.7UG0009850 R-AUM-1127733 AeUmb.TA1851.r1.7UG0009850 [cytosol] R-AUM-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119600 Valine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0010040 R-AUM-1127625 AeUmb.TA1851.r1.7UG0010040 [cytosol] R-AUM-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119265 Tetrahydrofolate biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0010040 R-AUM-1127625 AeUmb.TA1851.r1.7UG0010040 [cytosol] R-AUM-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119523 Tetrahydrofolate biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.7UG0010440 R-AUM-8933759 AeUmb.TA1851.r1.7UG0010440 [nucleoplasm] R-AUM-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8933811 Circadian rhythm none Aegilops umbellulata AeUmb.TA1851.r1.7UG0010470 R-AUM-6788261 AeUmb.TA1851.r1.7UG0010470 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0010600 R-AUM-9675426-2 AeUmb.TA1851.r1.7UG0010600 [nucleoplasm] R-AUM-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030654 Primary root development none Aegilops umbellulata AeUmb.TA1851.r1.7UG0010620 R-AUM-5608126 AeUmb.TA1851.r1.7UG0010620 [plasma membrane] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0010660 R-AUM-9684723 AeUmb.TA1851.r1.7UG0010660 [cytosol] R-AUM-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9609102 Flower development none Aegilops umbellulata AeUmb.TA1851.r1.7UG0011220 R-AUM-1129867 AeUmb.TA1851.r1.7UG0011220 [chloroplast] R-AUM-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119494 Tryptophan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0011310 R-AUM-1122605 AeUmb.TA1851.r1.7UG0011310 [cytosol] R-AUM-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119341 Galactosylcyclitol biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0011460 R-AUM-1127743 AeUmb.TA1851.r1.7UG0011460 [cytosol] R-AUM-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119428 GDP-D-rhamnose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0011460 R-AUM-9681930 AeUmb.TA1851.r1.7UG0011460 [Golgi membrane] R-AUM-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops umbellulata AeUmb.TA1851.r1.7UG0011460 R-AUM-1127743 AeUmb.TA1851.r1.7UG0011460 [cytosol] R-AUM-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops umbellulata AeUmb.TA1851.r1.7UG0011700 R-AUM-1122785 AeUmb.TA1851.r1.7UG0011700 [cytosol] R-AUM-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119273 Lysine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0011700 R-AUM-1122785 AeUmb.TA1851.r1.7UG0011700 [cytosol] R-AUM-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119283 Lysine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.7UG0011700 R-AUM-1122785 AeUmb.TA1851.r1.7UG0011700 [cytosol] R-AUM-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119570 Cytosolic glycolysis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0011830 R-AUM-1122601 AeUmb.TA1851.r1.7UG0011830 [mitochondrial inner membrane] R-AUM-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119533 TCA cycle (plant) none Aegilops umbellulata AeUmb.TA1851.r1.7UG0012640 R-AUM-5608123 AeUmb.TA1851.r1.7UG0012640 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0012800 R-AUM-8934208 AeUmb.TA1851.r1.7UG0012800 [nucleoplasm] R-AUM-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934036 Long day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.7UG0013150 R-AUM-9025739 AeUmb.TA1851.r1.7UG0013150 [plasma membrane] R-AUM-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9025727 Iron uptake and transport in root vascular system none Aegilops umbellulata AeUmb.TA1851.r1.7UG0013150 R-AUM-9025739 AeUmb.TA1851.r1.7UG0013150 [plasma membrane] R-AUM-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9618218 Arsenic uptake and detoxification none Aegilops umbellulata AeUmb.TA1851.r1.7UG0013620 R-AUM-1123059 AeUmb.TA1851.r1.7UG0013620 [cytosol] R-AUM-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119317 Spermine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0013620 R-AUM-1123059 AeUmb.TA1851.r1.7UG0013620 [cytosol] R-AUM-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119343 Spermidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0014310 R-AUM-5654827 AeUmb.TA1851.r1.7UG0014310 [nucleoplasm] R-AUM-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5654828 Strigolactone signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0014520 R-AUM-1129723 AeUmb.TA1851.r1.7UG0014520 [chloroplast] R-AUM-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119494 Tryptophan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0014670 R-AUM-5608120 AeUmb.TA1851.r1.7UG0014670 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0014710 R-AUM-1124613 AeUmb.TA1851.r1.7UG0014710 [plasma membrane] R-AUM-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119314 Cellulose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0014910 R-AUM-9609608-4 AeUmb.TA1851.r1.7UG0014910 [cytosol] R-AUM-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9609573 Tricin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0014910 R-AUM-9916171-4 OsOMT [cytosol] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.7UG0014910 R-AUM-9916312-4 OsOMT [nucleoplasm] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.7UG0014950 R-AUM-9026139 AeUmb.TA1851.r1.7UG0014950 [mitochondrion] R-AUM-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119458 Glutamate degradation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0014950 R-AUM-1130288 AeUmb.TA1851.r1.7UG0014950 [cytosol] R-AUM-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119610 Biotin biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.7UG0015010 R-AUM-1129547 AeUmb.TA1851.r1.7UG0015010 [cytosol] R-AUM-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119389 Phenylalanine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0015010 R-AUM-1129547 AeUmb.TA1851.r1.7UG0015010 [cytosol] R-AUM-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119400 Methionine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.7UG0015010 R-AUM-1129547 AeUmb.TA1851.r1.7UG0015010 [cytosol] R-AUM-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119506 tyrosine degradation I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0015170 R-AUM-1122403 AeUmb.TA1851.r1.7UG0015170 [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0015250 R-AUM-9918159 AeUmb.TA1851.r1.7UG0015250 [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0015380 R-AUM-6787257 AeUmb.TA1851.r1.7UG0015380 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0015380 R-AUM-6787976 AeUmb.TA1851.r1.7UG0015380 [cytosol] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0015380 R-AUM-6787257 AeUmb.TA1851.r1.7UG0015380 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0015780 R-AUM-1124921 AeUmb.TA1851.r1.7UG0015780 [cytosol] R-AUM-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0015840 R-AUM-1127346-3 AeUmb.TA1851.r1.7UG0015840 [cytosol] R-AUM-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119316 Phenylpropanoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0016470 R-AUM-6787012 AeUmb.TA1851.r1.7UG0016470 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0016660 R-AUM-5632120 AeUmb.TA1851.r1.7UG0016660 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0016840 R-AUM-2731026 AeUmb.TA1851.r1.7UG0016840 [endoplasmic reticulum membrane] R-AUM-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119557 GA12 biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0016840 R-AUM-1130405-2 AeUmb.TA1851.r1.7UG0016840 [endoplasmic reticulum membrane] R-AUM-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119557 GA12 biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0017100 R-AUM-5632340 AeUmb.TA1851.r1.7UG0017100 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0017200 R-AUM-1127523 AeUmb.TA1851.r1.7UG0017200 [cytosol] R-AUM-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Aegilops umbellulata AeUmb.TA1851.r1.7UG0017630 R-AUM-1128914 AeUmb.TA1851.r1.7UG0017630 [cytosol] R-AUM-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119281 Aspartate biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0017630 R-AUM-5632008 AeUmb.TA1851.r1.7UG0017630 [plastid stroma] R-AUM-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119553 Asparagine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0017780 R-AUM-9675352 AeUmb.TA1851.r1.7UG0017780 [plasma membrane] R-AUM-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030654 Primary root development none Aegilops umbellulata AeUmb.TA1851.r1.7UG0017980 R-AUM-1127170-2 AeUmb.TA1851.r1.7UG0017980 [cytosol] R-AUM-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119276 Choline biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.7UG0018450 R-AUM-5149694 AeUmb.TA1851.r1.7UG0018450 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.7UG0018790 R-AUM-6788201 AeUmb.TA1851.r1.7UG0018790 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0018980 R-AUM-9675803 AeUmb.TA1851.r1.7UG0018980 [nucleoplasm] R-AUM-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675815 Leading strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0019020 R-AUM-1123150-4 AeUmb.TA1851.r1.7UG0019020 [cytosol] R-AUM-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0019020 R-AUM-1123150-4 AeUmb.TA1851.r1.7UG0019020 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0019020 R-AUM-1123150-4 AeUmb.TA1851.r1.7UG0019020 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0019490 R-AUM-1126400 AeUmb.TA1851.r1.7UG0019490 [chloroplast] R-AUM-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119494 Tryptophan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0020170 R-AUM-1125277 AeUmb.TA1851.r1.7UG0020170 [cytosol] R-AUM-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119278 PRPP biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0021180 R-AUM-1128178-2 AeUmb.TA1851.r1.7UG0021180 [cytosol] R-AUM-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119322 Leucodelphinidin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0021180 R-AUM-1128178-2 AeUmb.TA1851.r1.7UG0021180 [cytosol] R-AUM-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0021180 R-AUM-9609575-2 AeUmb.TA1851.r1.7UG0021180 [endoplasmic reticulum membrane] R-AUM-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9609573 Tricin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0021240 R-AUM-1130153 AeUmb.TA1851.r1.7UG0021240 [cytosol] R-AUM-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119332 Jasmonic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0021240 R-AUM-6787115 AeUmb.TA1851.r1.7UG0021240 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0021550 R-AUM-4827046 AeUmb.TA1851.r1.7UG0021550 [plastid stroma] R-AUM-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-4827054 Tetrapyrrole biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0021560 R-AUM-5632143 AeUmb.TA1851.r1.7UG0021560 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0021560 R-AUM-5632143 AeUmb.TA1851.r1.7UG0021560 [nucleoplasm] R-AUM-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924451 Shoot (tiller) formation and regulation of tiller angle none Aegilops umbellulata AeUmb.TA1851.r1.7UG0021670 R-AUM-9675274 AeUmb.TA1851.r1.7UG0021670 [nucleoplasm] R-AUM-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030654 Primary root development none Aegilops umbellulata AeUmb.TA1851.r1.7UG0021930 R-AUM-5679502 AeUmb.TA1851.r1.7UG0021930 [plastid stroma] R-AUM-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5367729 Strigolactone biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0022010 R-AUM-3240749 AeUmb.TA1851.r1.7UG0022010 [cytosol] R-AUM-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Aegilops umbellulata AeUmb.TA1851.r1.7UG0022010 R-AUM-9681918 AeUmb.TA1851.r1.7UG0022010 [cytosol] R-AUM-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119574 UDP-L-arabinose biosynthesis and transport none Aegilops umbellulata AeUmb.TA1851.r1.7UG0022190 R-AUM-1129880 AeUmb.TA1851.r1.7UG0022190 [chloroplast] R-AUM-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119494 Tryptophan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0022650 R-AUM-9638997 AeUmb.TA1851.r1.7UG0022650 [cytosol] R-AUM-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119434 Phytic acid biosynthesis (lipid-independent) none Aegilops umbellulata AeUmb.TA1851.r1.7UG0022680 R-AUM-9639211-3 AeUmb.TA1851.r1.7UG0022680 [plant-type vacuole membrane] R-AUM-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9639136 Response to Aluminum stress none Aegilops umbellulata AeUmb.TA1851.r1.7UG0022790 R-AUM-1122287-4 AeUmb.TA1851.r1.7UG0022790 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0023020 R-AUM-8933763 AeUmb.TA1851.r1.7UG0023020 [nucleoplasm] R-AUM-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8933811 Circadian rhythm none Aegilops umbellulata AeUmb.TA1851.r1.7UG0023100 R-AUM-9645838 AeUmb.TA1851.r1.7UG0023100 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.7UG0023100 R-AUM-9645838 AeUmb.TA1851.r1.7UG0023100 [nucleoplasm] R-AUM-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675782 Maturation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0023100 R-AUM-9645838 AeUmb.TA1851.r1.7UG0023100 [nucleoplasm] R-AUM-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675885 Lagging strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0023350 R-AUM-2685721 AeUmb.TA1851.r1.7UG0023350 [cytosol] R-AUM-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119580 IAA biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.7UG0023960 R-AUM-1123336 AeUmb.TA1851.r1.7UG0023960 [cytosol] R-AUM-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119342 Gamma-glutamyl cycle none Aegilops umbellulata AeUmb.TA1851.r1.7UG0023960 R-AUM-1123336 AeUmb.TA1851.r1.7UG0023960 [cytosol] R-AUM-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119483 Glutathione biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0024440 R-AUM-5608129 AeUmb.TA1851.r1.7UG0024440 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0024880 R-AUM-5655071-2 AeUmb.TA1851.r1.7UG0024880 [Golgi lumen] R-AUM-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5655101 Xyloglucan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0024920 R-AUM-9645947 AeUmb.TA1851.r1.7UG0024920 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.7UG0024920 R-AUM-9645947 AeUmb.TA1851.r1.7UG0024920 [nucleoplasm] R-AUM-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675782 Maturation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0024920 R-AUM-9645947 AeUmb.TA1851.r1.7UG0024920 [nucleoplasm] R-AUM-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675815 Leading strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0024920 R-AUM-9645947 AeUmb.TA1851.r1.7UG0024920 [nucleoplasm] R-AUM-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675824 DNA replication Initiation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0024920 R-AUM-9645947 AeUmb.TA1851.r1.7UG0024920 [nucleoplasm] R-AUM-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675885 Lagging strand synthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0025130 R-AUM-1130327-2 AeUmb.TA1851.r1.7UG0025130 [cytosol] R-AUM-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119586 Cyanate degradation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0025140 R-AUM-1130327 AeUmb.TA1851.r1.7UG0025140 [cytosol] R-AUM-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119586 Cyanate degradation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0025460 R-AUM-1128734 AeUmb.TA1851.r1.7UG0025460 [cytosol] R-AUM-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119332 Jasmonic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0025540 R-AUM-1130025-2 AeUmb.TA1851.r1.7UG0025540 [endosome] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0025540 R-AUM-5679302-2 AeUmb.TA1851.r1.7UG0025540 [plasma membrane] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0025800 R-AUM-5608154 AeUmb.TA1851.r1.7UG0025800 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0025860 R-AUM-1128624 AeUmb.TA1851.r1.7UG0025860 [mitochondrial inner membrane] R-AUM-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119479 Valine degradation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0026070 R-AUM-5606478 AeUmb.TA1851.r1.7UG0026070 [plastid stroma] R-AUM-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119419 Lysine biosynthesis VI none Aegilops umbellulata AeUmb.TA1851.r1.7UG0026340 R-AUM-1127353 AeUmb.TA1851.r1.7UG0026340 [cytosol] R-AUM-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119506 tyrosine degradation I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0026490 R-AUM-9826627 OSMPH1 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.7UG0026870 R-AUM-5149675 AeUmb.TA1851.r1.7UG0026870 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.7UG0026870 R-AUM-1123828 AeUmb.TA1851.r1.7UG0026870 [cytosol] R-AUM-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119570 Cytosolic glycolysis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0027340 R-AUM-1123470-2 AeUmb.TA1851.r1.7UG0027340 [cytosol] R-AUM-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119292 Cytokinins 7-N-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0027340 R-AUM-1123470-2 AeUmb.TA1851.r1.7UG0027340 [cytosol] R-AUM-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119375 Cytokinins 9-N-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0027340 R-AUM-1123470-2 AeUmb.TA1851.r1.7UG0027340 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0027350 R-AUM-1125920 AeUmb.TA1851.r1.7UG0027350 [cytosol] R-AUM-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119273 Lysine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0027350 R-AUM-1125920 AeUmb.TA1851.r1.7UG0027350 [cytosol] R-AUM-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119283 Lysine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.7UG0027400 R-AUM-6787134 AeUmb.TA1851.r1.7UG0027400 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0027400 R-AUM-6787188 AeUmb.TA1851.r1.7UG0027400 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0027590 R-AUM-9658573 AeUmb.TA1851.r1.7UG0027590 [endoplasmic reticulum lumen] R-AUM-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119502 Allantoin degradation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0027800 R-AUM-3230566 AeUmb.TA1851.r1.7UG0027800 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.7UG0028340 R-AUM-8987448 AeUmb.TA1851.r1.7UG0028340 [peroxisomal matrix] R-AUM-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119312 Photorespiration none Aegilops umbellulata AeUmb.TA1851.r1.7UG0028370 R-AUM-1123046 AeUmb.TA1851.r1.7UG0028370 [cytosol] R-AUM-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119386 UDP-N-acetylgalactosamine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0028790 R-AUM-9618156-3 AeUmb.TA1851.r1.7UG0028790 [plasma membrane] R-AUM-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9618218 Arsenic uptake and detoxification none Aegilops umbellulata AeUmb.TA1851.r1.7UG0028850 R-AUM-1124759 AeUmb.TA1851.r1.7UG0028850 [endosome] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0028850 R-AUM-5679306 AeUmb.TA1851.r1.7UG0028850 [plasma membrane] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0029050 R-AUM-9918260 soluble Starch Synthase (SSII-3/SSIIa) [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0029180 R-AUM-9618126 AeUmb.TA1851.r1.7UG0029180 [plasma membrane] R-AUM-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9618218 Arsenic uptake and detoxification none Aegilops umbellulata AeUmb.TA1851.r1.7UG0029250 R-AUM-9025469 AeUmb.TA1851.r1.7UG0029250 [endoplasmic reticulum membrane] R-AUM-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119325 Sphingolipid metabolism none Aegilops umbellulata AeUmb.TA1851.r1.7UG0029260 R-AUM-9025469-2 AeUmb.TA1851.r1.7UG0029260 [endoplasmic reticulum membrane] R-AUM-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119325 Sphingolipid metabolism none Aegilops umbellulata AeUmb.TA1851.r1.7UG0029460 R-AUM-1122651 AeUmb.TA1851.r1.7UG0029460 [plastid stroma] R-AUM-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119430 Chorismate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0030580 R-AUM-9640707 AeUmb.TA1851.r1.7UG0030580 [nucleoplasm] R-AUM-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640760 G1 phase none Aegilops umbellulata AeUmb.TA1851.r1.7UG0030690 R-AUM-5655090 AeUmb.TA1851.r1.7UG0030690 [Golgi lumen] R-AUM-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5655101 Xyloglucan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0030700 R-AUM-5655095 AeUmb.TA1851.r1.7UG0030700 [Golgi lumen] R-AUM-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5655101 Xyloglucan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0030710 R-AUM-5655100 AeUmb.TA1851.r1.7UG0030710 [Golgi lumen] R-AUM-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5655101 Xyloglucan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0030930 R-AUM-9611524 LYP6 [plasma membrane] R-AUM-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9611432 Recognition of fungal and bacterial pathogens and immunity response none Aegilops umbellulata AeUmb.TA1851.r1.7UG0031230 R-AUM-8854458 AeUmb.TA1851.r1.7UG0031230 [cytosol] R-AUM-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119276 Choline biosynthesis III none Aegilops umbellulata AeUmb.TA1851.r1.7UG0031630 R-AUM-5608125 AeUmb.TA1851.r1.7UG0031630 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0031910 R-AUM-1124377 AeUmb.TA1851.r1.7UG0031910 [cytosol] R-AUM-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119452 Galactose degradation II none Aegilops umbellulata AeUmb.TA1851.r1.7UG0031910 R-AUM-1124377 AeUmb.TA1851.r1.7UG0031910 [cytosol] R-AUM-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119465 Sucrose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0031960 R-AUM-9639003 AeUmb.TA1851.r1.7UG0031960 [cytosol] R-AUM-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119434 Phytic acid biosynthesis (lipid-independent) none Aegilops umbellulata AeUmb.TA1851.r1.7UG0032350 R-AUM-9675335 AeUmb.TA1851.r1.7UG0032350 [mitochondrial matrix] R-AUM-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675508 Root elongation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0032530 R-AUM-1125911 AeUmb.TA1851.r1.7UG0032530 [cytosol] R-AUM-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119428 GDP-D-rhamnose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0032530 R-AUM-1125911 AeUmb.TA1851.r1.7UG0032530 [cytosol] R-AUM-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops umbellulata AeUmb.TA1851.r1.7UG0032560 R-AUM-9640675 AeUmb.TA1851.r1.7UG0032560 [nucleoplasm] R-AUM-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9640882 Assembly of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.7UG0032560 R-AUM-9640675 AeUmb.TA1851.r1.7UG0032560 [nucleoplasm] R-AUM-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9645850 Activation of pre-replication complex none Aegilops umbellulata AeUmb.TA1851.r1.7UG0032680 R-AUM-1128173 AeUmb.TA1851.r1.7UG0032680 [cytosol] R-AUM-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119437 Glutathione redox reactions I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0033230 R-AUM-9675476-2 AeUmb.TA1851.r1.7UG0033230 [nucleoplasm] R-AUM-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030654 Primary root development none Aegilops umbellulata AeUmb.TA1851.r1.7UG0033240 R-AUM-9675476 AeUmb.TA1851.r1.7UG0033240 [nucleoplasm] R-AUM-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030654 Primary root development none Aegilops umbellulata AeUmb.TA1851.r1.7UG0033620 R-AUM-1129082 AeUmb.TA1851.r1.7UG0033620 [mitochondrial matrix] R-AUM-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119445 Beta-alanine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.7UG0033770 R-AUM-1129485 AeUmb.TA1851.r1.7UG0033770 [cytosol] R-AUM-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119341 Galactosylcyclitol biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0033880 R-AUM-1122287-6 AeUmb.TA1851.r1.7UG0033880 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0033890 R-AUM-1122287-16 AeUmb.TA1851.r1.7UG0033890 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0033900 R-AUM-1125261 AeUmb.TA1851.r1.7UG0033900 R-AUM-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119400 Methionine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.7UG0033930 R-AUM-1122287-14 AeUmb.TA1851.r1.7UG0033930 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0033940 R-AUM-1122287-2 AeUmb.TA1851.r1.7UG0033940 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0034400 R-AUM-9918273 AeUmb.TA1851.r1.7UG0034400 [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0034400 R-AUM-9626376 AeUmb.TA1851.r1.7UG0034400 [plastid stroma] R-AUM-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9626305 Regulatory network of nutrient accumulation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0034760 R-AUM-1125910 AeUmb.TA1851.r1.7UG0034760 [plastid stroma] R-AUM-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119367 Polyisoprenoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0034850 R-AUM-5608174 AeUmb.TA1851.r1.7UG0034850 [nucleoplasm] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0034870 R-AUM-8879009 AeUmb.TA1851.r1.7UG0034870 [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.7UG0035250 R-AUM-5655100-2 AeUmb.TA1851.r1.7UG0035250 [Golgi lumen] R-AUM-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5655101 Xyloglucan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0035590 R-AUM-1128586 AeUmb.TA1851.r1.7UG0035590 [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0035860 R-AUM-8986623 AeUmb.TA1851.r1.7UG0035860 [nucleoplasm] R-AUM-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8986768 Anther and pollen development none Aegilops umbellulata AeUmb.TA1851.r1.7UG0036030 R-AUM-8934025 AeUmb.TA1851.r1.7UG0036030 [nucleoplasm] R-AUM-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934036 Long day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.7UG0036030 R-AUM-8934025 AeUmb.TA1851.r1.7UG0036030 [nucleoplasm] R-AUM-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934108 Short day regulated expression of florigens none Aegilops umbellulata AeUmb.TA1851.r1.7UG0036030 R-AUM-8934025 AeUmb.TA1851.r1.7UG0036030 [nucleoplasm] R-AUM-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934257 Transition from vegetative to reproductive shoot apical meristem none Aegilops umbellulata AeUmb.TA1851.r1.7UG0036030 R-AUM-9684733 AeUmb.TA1851.r1.7UG0036030 [cytosol] R-AUM-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8934257 Transition from vegetative to reproductive shoot apical meristem none Aegilops umbellulata AeUmb.TA1851.r1.7UG0036030 R-AUM-9684733 AeUmb.TA1851.r1.7UG0036030 [cytosol] R-AUM-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9609102 Flower development none Aegilops umbellulata AeUmb.TA1851.r1.7UG0036030 R-AUM-8934025 AeUmb.TA1851.r1.7UG0036030 [nucleoplasm] R-AUM-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9928946 Drought escape (DE) via ABA-independent pathway none Aegilops umbellulata AeUmb.TA1851.r1.7UG0036030 R-AUM-8934025 AeUmb.TA1851.r1.7UG0036030 [nucleoplasm] R-AUM-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9928995 Drought escape (DE) via ABA-dependent pathway none Aegilops umbellulata AeUmb.TA1851.r1.7UG0036410 R-AUM-9675391 AeUmb.TA1851.r1.7UG0036410 [nucleoplasm] R-AUM-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9675508 Root elongation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0036430 R-AUM-5654840 AeUmb.TA1851.r1.7UG0036430 [nucleoplasm] R-AUM-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5654828 Strigolactone signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0036430 R-AUM-5654840 AeUmb.TA1851.r1.7UG0036430 [nucleoplasm] R-AUM-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Aegilops umbellulata AeUmb.TA1851.r1.7UG0036900 R-AUM-9916124 OsPRX95 [extracellular region] R-AUM-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119403 Removal of superoxide radicals none Aegilops umbellulata AeUmb.TA1851.r1.7UG0036900 R-AUM-9916124 OsPRX95 [extracellular region] R-AUM-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9607185 Generation of superoxide radicals none Aegilops umbellulata AeUmb.TA1851.r1.7UG0038260 R-AUM-1129355 AeUmb.TA1851.r1.7UG0038260 [plastid] R-AUM-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119403 Removal of superoxide radicals none Aegilops umbellulata AeUmb.TA1851.r1.7UG0038370 R-AUM-1122836-4 AeUmb.TA1851.r1.7UG0038370 [cytosol] R-AUM-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119586 Cyanate degradation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0038380 R-AUM-1122836-2 AeUmb.TA1851.r1.7UG0038380 [cytosol] R-AUM-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119586 Cyanate degradation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0038390 R-AUM-1122836-5 AeUmb.TA1851.r1.7UG0038390 [cytosol] R-AUM-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119586 Cyanate degradation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0038400 R-AUM-1122836-3 AeUmb.TA1851.r1.7UG0038400 [cytosol] R-AUM-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119586 Cyanate degradation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0038410 R-AUM-9916108 AeUmb.TA1851.r1.7UG0038410 [extracellular region] R-AUM-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119403 Removal of superoxide radicals none Aegilops umbellulata AeUmb.TA1851.r1.7UG0038410 R-AUM-9916108 AeUmb.TA1851.r1.7UG0038410 [extracellular region] R-AUM-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9607185 Generation of superoxide radicals none Aegilops umbellulata AeUmb.TA1851.r1.7UG0038420 R-AUM-1122836 AeUmb.TA1851.r1.7UG0038420 [cytosol] R-AUM-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119586 Cyanate degradation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0039150 R-AUM-1129438 AeUmb.TA1851.r1.7UG0039150 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0039160 R-AUM-1122287-17 AeUmb.TA1851.r1.7UG0039160 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0039170 R-AUM-1122287-12 AeUmb.TA1851.r1.7UG0039170 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0039180 R-AUM-1122287-9 AeUmb.TA1851.r1.7UG0039180 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0039190 R-AUM-1122287-11 AeUmb.TA1851.r1.7UG0039190 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0039200 R-AUM-1122287-5 AeUmb.TA1851.r1.7UG0039200 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0039210 R-AUM-1122287-3 AeUmb.TA1851.r1.7UG0039210 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0039220 R-AUM-1122287-13 AeUmb.TA1851.r1.7UG0039220 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0039230 R-AUM-1122287-7 AeUmb.TA1851.r1.7UG0039230 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0039240 R-AUM-1122287-8 AeUmb.TA1851.r1.7UG0039240 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0039590 R-AUM-1127880 AeUmb.TA1851.r1.7UG0039590 [cytosol] R-AUM-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119291 Nitrate assimilation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0039630 R-AUM-1129282 AeUmb.TA1851.r1.7UG0039630 [cytosol] R-AUM-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119428 GDP-D-rhamnose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0039630 R-AUM-1129282 AeUmb.TA1851.r1.7UG0039630 [cytosol] R-AUM-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops umbellulata AeUmb.TA1851.r1.7UG0039660 R-AUM-1129282-2 AeUmb.TA1851.r1.7UG0039660 [cytosol] R-AUM-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119428 GDP-D-rhamnose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0039660 R-AUM-1129282-2 AeUmb.TA1851.r1.7UG0039660 [cytosol] R-AUM-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Aegilops umbellulata AeUmb.TA1851.r1.7UG0039830 R-AUM-8878987 AeUmb.TA1851.r1.7UG0039830 [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.7UG0040470 R-AUM-1130247 AeUmb.TA1851.r1.7UG0040470 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.7UG0040540 R-AUM-9918210 granule-bound starch synthase 1 (GBSSI, or Waxy) [amyloplast] R-AUM-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119477 Starch biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0040540 R-AUM-9626344 AeUmb.TA1851.r1.7UG0040540 [plastid stroma] R-AUM-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9626305 Regulatory network of nutrient accumulation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0040620 R-AUM-1123832 AeUmb.TA1851.r1.7UG0040620 [cytosol] R-AUM-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119304 Putrescine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.7UG0040620 R-AUM-1123832 AeUmb.TA1851.r1.7UG0040620 [cytosol] R-AUM-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119447 Putrescine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0041460 R-AUM-1123150 AeUmb.TA1851.r1.7UG0041460 [cytosol] R-AUM-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0041460 R-AUM-1123150 AeUmb.TA1851.r1.7UG0041460 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0041460 R-AUM-1123150 AeUmb.TA1851.r1.7UG0041460 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0041470 R-AUM-1123150-10 AeUmb.TA1851.r1.7UG0041470 [cytosol] R-AUM-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0041470 R-AUM-1123150-10 AeUmb.TA1851.r1.7UG0041470 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0041470 R-AUM-1123150-10 AeUmb.TA1851.r1.7UG0041470 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0041490 R-AUM-1123150-7 AeUmb.TA1851.r1.7UG0041490 [cytosol] R-AUM-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0041490 R-AUM-1123150-7 AeUmb.TA1851.r1.7UG0041490 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0041490 R-AUM-1123150-7 AeUmb.TA1851.r1.7UG0041490 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0041540 R-AUM-5632261 AeUmb.TA1851.r1.7UG0041540 [nucleoplasm] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0041650 R-AUM-8879085-3 AeUmb.TA1851.r1.7UG0041650 [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.7UG0041660 R-AUM-8879085-2 AeUmb.TA1851.r1.7UG0041660 [nucleoplasm] R-AUM-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8879007 Response to cold temperature none Aegilops umbellulata AeUmb.TA1851.r1.7UG0041700 R-AUM-1124866-3 AeUmb.TA1851.r1.7UG0041700 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0041810 R-AUM-1124866-2 AeUmb.TA1851.r1.7UG0041810 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0041820 R-AUM-1124866 AeUmb.TA1851.r1.7UG0041820 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0041830 R-AUM-1126916-2 AeUmb.TA1851.r1.7UG0041830 [plastid stroma] R-AUM-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119464 Methylerythritol phosphate pathway none Aegilops umbellulata AeUmb.TA1851.r1.7UG0041840 R-AUM-1124778-3 AeUmb.TA1851.r1.7UG0041840 [plastid stroma] R-AUM-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119464 Methylerythritol phosphate pathway none Aegilops umbellulata AeUmb.TA1851.r1.7UG0041850 R-AUM-1124866-5 AeUmb.TA1851.r1.7UG0041850 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0042610 R-AUM-1125399 AeUmb.TA1851.r1.7UG0042610 [plastid] R-AUM-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119403 Removal of superoxide radicals none Aegilops umbellulata AeUmb.TA1851.r1.7UG0043150 R-AUM-1124695 AeUmb.TA1851.r1.7UG0043150 [cytosol] R-AUM-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119452 Galactose degradation II none Aegilops umbellulata AeUmb.TA1851.r1.7UG0043150 R-AUM-1124695 AeUmb.TA1851.r1.7UG0043150 [cytosol] R-AUM-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119465 Sucrose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0043900 R-AUM-1123609 AeUmb.TA1851.r1.7UG0043900 [plasma membrane] R-AUM-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119314 Cellulose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0043960 R-AUM-1126971 AeUmb.TA1851.r1.7UG0043960 [cytosol] R-AUM-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119332 Jasmonic acid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0043960 R-AUM-1126971 AeUmb.TA1851.r1.7UG0043960 [cytosol] R-AUM-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119618 13-LOX and 13-HPL pathway none Aegilops umbellulata AeUmb.TA1851.r1.7UG0044000 R-AUM-1123561-2 AeUmb.TA1851.r1.7UG0044000 [cytosol] R-AUM-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119624 Methionine salvage pathway none Aegilops umbellulata AeUmb.TA1851.r1.7UG0044190 R-AUM-1125766 AeUmb.TA1851.r1.7UG0044190 [cytosol] R-AUM-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119557 GA12 biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0044730 R-AUM-6788127-2 AeUmb.TA1851.r1.7UG0044730 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0044730 R-AUM-6788179-2 AeUmb.TA1851.r1.7UG0044730 [cytosol] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0044760 R-AUM-9639892 AeUmb.TA1851.r1.7UG0044760 [cell wall] R-AUM-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9639861 Development of root hair none Aegilops umbellulata AeUmb.TA1851.r1.7UG0045070 R-AUM-9622200 AeUmb.TA1851.r1.7UG0045070 [plasma membrane] R-AUM-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9035605 Regulation of seed size none Aegilops umbellulata AeUmb.TA1851.r1.7UG0045620 R-AUM-5608093 AeUmb.TA1851.r1.7UG0045620 [plasma membrane] R-AUM-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5608118 Auxin signalling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0045940 R-AUM-1127734 AeUmb.TA1851.r1.7UG0045940 [cytosol] R-AUM-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119506 tyrosine degradation I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0046240 R-AUM-6787880 AeUmb.TA1851.r1.7UG0046240 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0046300 R-AUM-6788127 AeUmb.TA1851.r1.7UG0046300 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0046300 R-AUM-6788179 AeUmb.TA1851.r1.7UG0046300 [cytosol] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0046320 R-AUM-5679376 AeUmb.TA1851.r1.7UG0046320 [nucleoplasm] R-AUM-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5679411 Gibberellin signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0046510 R-AUM-9826661 AeUmb.TA1851.r1.7UG0046510 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.7UG0046570 R-AUM-1124944-2 AeUmb.TA1851.r1.7UG0046570 [plastid stroma] R-AUM-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119460 Isoleucine biosynthesis from threonine none Aegilops umbellulata AeUmb.TA1851.r1.7UG0046570 R-AUM-1124944-2 AeUmb.TA1851.r1.7UG0046570 [plastid stroma] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0046570 R-AUM-1124944-2 AeUmb.TA1851.r1.7UG0046570 [plastid stroma] R-AUM-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119502 Allantoin degradation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0046570 R-AUM-1124944-2 AeUmb.TA1851.r1.7UG0046570 [plastid stroma] R-AUM-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119600 Valine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0046580 R-AUM-1124944 AeUmb.TA1851.r1.7UG0046580 [plastid stroma] R-AUM-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119460 Isoleucine biosynthesis from threonine none Aegilops umbellulata AeUmb.TA1851.r1.7UG0046580 R-AUM-1124944 AeUmb.TA1851.r1.7UG0046580 [plastid stroma] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0046580 R-AUM-1124944 AeUmb.TA1851.r1.7UG0046580 [plastid stroma] R-AUM-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119502 Allantoin degradation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0046580 R-AUM-1124944 AeUmb.TA1851.r1.7UG0046580 [plastid stroma] R-AUM-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119600 Valine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0046710 R-AUM-1124797-2 AeUmb.TA1851.r1.7UG0046710 [cytosol] R-AUM-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119473 Cytokinins-O-glucoside biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0046880 R-AUM-6788042 AeUmb.TA1851.r1.7UG0046880 [nucleoplasm] R-AUM-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6788019 Salicylic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0047480 R-AUM-1125521 AeUmb.TA1851.r1.7UG0047480 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0047510 R-AUM-1127752 AeUmb.TA1851.r1.7UG0047510 [cytosol] R-AUM-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119417 Stachyose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0048040 R-AUM-1122545 AeUmb.TA1851.r1.7UG0048040 [cytosol] R-AUM-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119331 Cysteine biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0048250 R-AUM-1130231 AeUmb.TA1851.r1.7UG0048250 [endoplasmic reticulum membrane] R-AUM-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119325 Sphingolipid metabolism none Aegilops umbellulata AeUmb.TA1851.r1.7UG0048420 R-AUM-1128613 AeUmb.TA1851.r1.7UG0048420 [cytosol] R-AUM-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119316 Phenylpropanoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0048500 R-AUM-1125182 AeUmb.TA1851.r1.7UG0048500 [plastid stroma] R-AUM-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119430 Chorismate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0048810 R-AUM-1123211 AeUmb.TA1851.r1.7UG0048810 [cytosol] R-AUM-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Aegilops umbellulata AeUmb.TA1851.r1.7UG0048810 R-AUM-1123211 AeUmb.TA1851.r1.7UG0048810 [cytosol] R-AUM-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119370 Sterol biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0048810 R-AUM-1123211 AeUmb.TA1851.r1.7UG0048810 [cytosol] R-AUM-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119439 Cholesterol biosynthesis III (via desmosterol) none Aegilops umbellulata AeUmb.TA1851.r1.7UG0048810 R-AUM-1123211 AeUmb.TA1851.r1.7UG0048810 [cytosol] R-AUM-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119559 Cholesterol biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0049050 R-AUM-5633387-2 AeUmb.TA1851.r1.7UG0049050 [mitochondrial matrix] R-AUM-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119445 Beta-alanine biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.7UG0049110 R-AUM-1128322 AeUmb.TA1851.r1.7UG0049110 [cytosol] R-AUM-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119384 NAD biosynthesis I (from aspartate) none Aegilops umbellulata AeUmb.TA1851.r1.7UG0049270 R-AUM-1125877 AeUmb.TA1851.r1.7UG0049270 [cytosol] R-AUM-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119456 Brassinosteroid biosynthesis II none Aegilops umbellulata AeUmb.TA1851.r1.7UG0049340 R-AUM-5367761-2 AeUmb.TA1851.r1.7UG0049340 [plastid stroma] R-AUM-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5367729 Strigolactone biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0050730 R-AUM-5632238 AeUmb.TA1851.r1.7UG0050730 [cytosol] R-AUM-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5632095 Brassinosteroid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0050930 R-AUM-9826681-2 EREBP129 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.7UG0050960 R-AUM-9826681 EREBP129 [nucleoplasm] R-AUM-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Aegilops umbellulata AeUmb.TA1851.r1.7UG0051170 R-AUM-1127346-2 AeUmb.TA1851.r1.7UG0051170 [cytosol] R-AUM-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119316 Phenylpropanoid biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0052190 R-AUM-1128637 AeUmb.TA1851.r1.7UG0052190 [chloroplast] R-AUM-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119494 Tryptophan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0052230 R-AUM-1129781 AeUmb.TA1851.r1.7UG0052230 [chloroplast] R-AUM-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119494 Tryptophan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0052430 R-AUM-6787004 AeUmb.TA1851.r1.7UG0052430 [cytosol] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0052430 R-AUM-6786938 AeUmb.TA1851.r1.7UG0052430 [nucleoplasm] R-AUM-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-6787011 Jasmonic acid signaling none Aegilops umbellulata AeUmb.TA1851.r1.7UG0052500 R-AUM-1126531 AeUmb.TA1851.r1.7UG0052500 [cytosol] R-AUM-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119410 Ascorbate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0052500 R-AUM-1126531 AeUmb.TA1851.r1.7UG0052500 [cytosol] R-AUM-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119628 GDP-mannose metabolism none Aegilops umbellulata AeUmb.TA1851.r1.7UG0052830 R-AUM-9916160 AeUmb.TA1851.r1.7UG0052830 [nucleoplasm] R-AUM-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9916190 Root angle formation: elongation and curvature response none Aegilops umbellulata AeUmb.TA1851.r1.7UG0053070 R-AUM-5654913 AeUmb.TA1851.r1.7UG0053070 [Golgi lumen] R-AUM-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-5654909 Xylan biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0053340 R-AUM-1125701 AeUmb.TA1851.r1.7UG0053340 [cytosol] R-AUM-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119261 Salicylate biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0053340 R-AUM-1125701 AeUmb.TA1851.r1.7UG0053340 [cytosol] R-AUM-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119418 Suberin biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0053340 R-AUM-1125701 AeUmb.TA1851.r1.7UG0053340 [cytosol] R-AUM-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119582 Phenylpropanoid biosynthesis, initial reactions none Aegilops umbellulata AeUmb.TA1851.r1.7UG0053580 R-AUM-1123150-8 AeUmb.TA1851.r1.7UG0053580 [cytosol] R-AUM-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0053580 R-AUM-1123150-8 AeUmb.TA1851.r1.7UG0053580 [cytosol] R-AUM-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119438 Secologanin and strictosidine biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0053580 R-AUM-1123150-8 AeUmb.TA1851.r1.7UG0053580 [cytosol] R-AUM-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119486 IAA biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0053960 R-AUM-1122843 AeUmb.TA1851.r1.7UG0053960 [cytosol] R-AUM-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119458 Glutamate degradation none Aegilops umbellulata AeUmb.TA1851.r1.7UG0053990 R-AUM-9675352-2 AeUmb.TA1851.r1.7UG0053990 [plasma membrane] R-AUM-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-9030654 Primary root development none Aegilops umbellulata AeUmb.TA1851.r1.7UG0054040 R-AUM-9025363 AeUmb.TA1851.r1.7UG0054040 [endoplasmic reticulum membrane] R-AUM-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119402 Phospholipid biosynthesis I none Aegilops umbellulata AeUmb.TA1851.r1.7UG0054080 R-AUM-5149676 AeUmb.TA1851.r1.7UG0054080 [plastid stroma] R-AUM-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119519 Calvin cycle none Aegilops umbellulata AeUmb.TA1851.r1.7UG0054400 R-AUM-1127574 AeUmb.TA1851.r1.7UG0054400 [cytosol] R-AUM-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119465 Sucrose biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0055080 R-AUM-8868961 AeUmb.TA1851.r1.7UG0055080 [plant-type vacuole membrane] R-AUM-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-8868949 Intracellular auxin transport none Aegilops umbellulata AeUmb.TA1851.r1.7UG0055320 R-AUM-1124270 AeUmb.TA1851.r1.7UG0055320 [cytosol] R-AUM-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119615 Mevalonate pathway none Aegilops umbellulata AeUmb.TA1851.r1.7UG0055810 R-AUM-1126636 AeUmb.TA1851.r1.7UG0055810 [cytosol] R-AUM-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119370 Sterol biosynthesis none Aegilops umbellulata AeUmb.TA1851.r1.7UG0055830 R-AUM-1126916 AeUmb.TA1851.r1.7UG0055830 [plastid stroma] R-AUM-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119464 Methylerythritol phosphate pathway none Aegilops umbellulata AeUmb.TA1851.r1.UnG0004720 R-AUM-8987535-2 AeUmb.TA1851.r1.UnG0004720 [chloroplast] R-AUM-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-AUM-1119312 Photorespiration none Aegilops umbellulata Al_scaffold_0001_1139 R-ALY-9611469-2 phospho-phosphorylated-SDS2 [plasma membrane] R-ALY-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis lyrata Al_scaffold_0001_1139 R-ALY-9611553-2 ubiquitinated-SDS2 [cytosol] R-ALY-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis lyrata Al_scaffold_0001_1145 R-ALY-9611469 phospho-phosphorylated-SDS2 [plasma membrane] R-ALY-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis lyrata Al_scaffold_0001_1145 R-ALY-9611553 ubiquitinated-SDS2 [cytosol] R-ALY-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9611432 Recognition of fungal and bacterial pathogens and immunity response none Arabidopsis lyrata Al_scaffold_0001_1171 R-ALY-9918175 Al_scaffold_0001_1171 [amyloplast] R-ALY-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119477 Starch biosynthesis none Arabidopsis lyrata Al_scaffold_0001_1215 R-ALY-1122827 Al_scaffold_0001_1215 [cytosol] R-ALY-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119334 Ethylene biosynthesis from methionine none Arabidopsis lyrata Al_scaffold_0001_1326 R-ALY-8879006-2 Al_scaffold_0001_1326 [nucleoplasm] R-ALY-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-8879007 Response to cold temperature none Arabidopsis lyrata Al_scaffold_0001_1456 R-ALY-5655076 Al_scaffold_0001_1456 [Golgi lumen] R-ALY-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-5655101 Xyloglucan biosynthesis none Arabidopsis lyrata Al_scaffold_0001_1457 R-ALY-5655076-4 Al_scaffold_0001_1457 [Golgi lumen] R-ALY-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-5655101 Xyloglucan biosynthesis none Arabidopsis lyrata Al_scaffold_0001_1761 R-ALY-1123482-2 Al_scaffold_0001_1761 [plastid stroma] R-ALY-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119367 Polyisoprenoid biosynthesis none Arabidopsis lyrata Al_scaffold_0001_1819 R-ALY-4415101 Al_scaffold_0001_1819 [cytosol] R-ALY-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis lyrata Al_scaffold_0001_1819 R-ALY-4415101 Al_scaffold_0001_1819 [cytosol] R-ALY-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9639861 Development of root hair none Arabidopsis lyrata Al_scaffold_0001_2487 R-ALY-1130327-2 Al_scaffold_0001_2487 [cytosol] R-ALY-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119586 Cyanate degradation none Arabidopsis lyrata Al_scaffold_0001_2743 R-ALY-5679470 Al_scaffold_0001_2743 [nucleoplasm] R-ALY-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-5679411 Gibberellin signaling none Arabidopsis lyrata Al_scaffold_0001_3249 R-ALY-9618197-3 Al_scaffold_0001_3249 [plasma membrane] R-ALY-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9618218 Arsenic uptake and detoxification none Arabidopsis lyrata Al_scaffold_0001_3451 R-ALY-9916305-2 Al_scaffold_0001_3451 [nucleoplasm] R-ALY-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9916190 Root angle formation: elongation and curvature response none Arabidopsis lyrata Al_scaffold_0001_3492 R-ALY-8854108 Al_scaffold_0001_3492 [cytosol] R-ALY-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119556 Choline biosynthesis I none Arabidopsis lyrata Al_scaffold_0001_3500 R-ALY-9675365-5 Al_scaffold_0001_3500 [nucleoplasm] R-ALY-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9675508 Root elongation none Arabidopsis lyrata Al_scaffold_0001_353 R-ALY-5225766-3 Al_scaffold_0001_353 [nucleoplasm] R-ALY-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-5225756 Ethylene mediated signaling none Arabidopsis lyrata Al_scaffold_0001_3749 R-ALY-9675365-4 Al_scaffold_0001_3749 [nucleoplasm] R-ALY-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9675508 Root elongation none Arabidopsis lyrata Al_scaffold_0001_4531 R-ALY-1127089 Al_scaffold_0001_4531 [cytosol] R-ALY-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119465 Sucrose biosynthesis none Arabidopsis lyrata Al_scaffold_0001_4669 R-ALY-1128334-2 Al_scaffold_0001_4669 [mitochondrial matrix] R-ALY-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119337 Proline degradation none Arabidopsis lyrata Al_scaffold_0001_4681 R-ALY-1125906 Al_scaffold_0001_4681 [cytosol] R-ALY-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119276 Choline biosynthesis III none Arabidopsis lyrata Al_scaffold_0001_4800 R-ALY-9612372 Al_scaffold_0001_4800 [mitochondrial matrix] R-ALY-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119612 Cysteine degradation none Arabidopsis lyrata Al_scaffold_0001_4885 R-ALY-5679401 Al_scaffold_0001_4885 [nucleoplasm] R-ALY-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-5679411 Gibberellin signaling none Arabidopsis lyrata Al_scaffold_0001_4899 R-ALY-1124786 Al_scaffold_0001_4899 [cytosol] R-ALY-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119276 Choline biosynthesis III none Arabidopsis lyrata Al_scaffold_0001_5055 R-ALY-5632268-3 Al_scaffold_0001_5055 [nucleoplasm] R-ALY-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-5632095 Brassinosteroid signaling none Arabidopsis lyrata Al_scaffold_0001_981 R-ALY-1122974-4 Al_scaffold_0001_981 [mitochondrial matrix] R-ALY-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119479 Valine degradation none Arabidopsis lyrata Al_scaffold_0002_1331 R-ALY-1126531 Al_scaffold_0002_1331 [cytosol] R-ALY-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119410 Ascorbate biosynthesis none Arabidopsis lyrata Al_scaffold_0002_1331 R-ALY-1126531 Al_scaffold_0002_1331 [cytosol] R-ALY-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119628 GDP-mannose metabolism none Arabidopsis lyrata Al_scaffold_0002_1456 R-ALY-1128804 Al_scaffold_0002_1456 [cytosol] R-ALY-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119516 Trehalose biosynthesis I none Arabidopsis lyrata Al_scaffold_0002_1774 R-ALY-1128126 Al_scaffold_0002_1774 [endosome] R-ALY-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-5608118 Auxin signalling none Arabidopsis lyrata Al_scaffold_0002_1774 R-ALY-5679348 Al_scaffold_0002_1774 [plasma membrane] R-ALY-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-5608118 Auxin signalling none Arabidopsis lyrata Al_scaffold_0002_2053 R-ALY-8854127 Al_scaffold_0002_2053 [cytosol] R-ALY-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119556 Choline biosynthesis I none Arabidopsis lyrata Al_scaffold_0002_210 R-ALY-9826696-5 Al_scaffold_0002_210 [nucleoplasm] R-ALY-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis lyrata Al_scaffold_0002_2143 R-ALY-5655076-7 Al_scaffold_0002_2143 [Golgi lumen] R-ALY-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-5655101 Xyloglucan biosynthesis none Arabidopsis lyrata Al_scaffold_0002_256 R-ALY-1126888-2 Al_scaffold_0002_256 [cytosol] R-ALY-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119360 Fructan biosynthesis none Arabidopsis lyrata Al_scaffold_0002_2661 R-ALY-1127527 Al_scaffold_0002_2661 [cytosol] R-ALY-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Arabidopsis lyrata Al_scaffold_0002_2733 R-ALY-5138505 Al_scaffold_0002_2733 [plastid stroma] R-ALY-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119263 Arginine biosynthesis none Arabidopsis lyrata Al_scaffold_0002_2733 R-ALY-5138505 Al_scaffold_0002_2733 [plastid stroma] R-ALY-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119539 Ornithine biosynthesis none Arabidopsis lyrata Al_scaffold_0002_2733 R-ALY-5138505 Al_scaffold_0002_2733 [plastid stroma] R-ALY-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119622 Arginine biosynthesis II (acetyl cycle) none Arabidopsis lyrata Al_scaffold_0002_2757 R-ALY-8987467 Al_scaffold_0002_2757 [chloroplast] R-ALY-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119502 Allantoin degradation none Arabidopsis lyrata Al_scaffold_0002_69 R-ALY-5654827 Al_scaffold_0002_69 [nucleoplasm] R-ALY-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-5654828 Strigolactone signaling none Arabidopsis lyrata Al_scaffold_0003_1142 R-ALY-1123470-7 Al_scaffold_0003_1142 [cytosol] R-ALY-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis lyrata Al_scaffold_0003_1142 R-ALY-1123470-7 Al_scaffold_0003_1142 [cytosol] R-ALY-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis lyrata Al_scaffold_0003_1142 R-ALY-1123470-7 Al_scaffold_0003_1142 [cytosol] R-ALY-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis lyrata Al_scaffold_0003_1850 R-ALY-1129914 Al_scaffold_0003_1850 [nucleoplasm] R-ALY-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-5608118 Auxin signalling none Arabidopsis lyrata Al_scaffold_0003_2177 R-ALY-1122403 Al_scaffold_0003_2177 [amyloplast] R-ALY-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119477 Starch biosynthesis none Arabidopsis lyrata Al_scaffold_0003_2273 R-ALY-1125406-2 Al_scaffold_0003_2273 [cytosol] R-ALY-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119418 Suberin biosynthesis none Arabidopsis lyrata Al_scaffold_0003_2329 R-ALY-1127625-3 Al_scaffold_0003_2329 [cytosol] R-ALY-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119265 Tetrahydrofolate biosynthesis I none Arabidopsis lyrata Al_scaffold_0003_2329 R-ALY-1127625-3 Al_scaffold_0003_2329 [cytosol] R-ALY-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119523 Tetrahydrofolate biosynthesis II none Arabidopsis lyrata Al_scaffold_0003_2493 R-ALY-5225766-2 Al_scaffold_0003_2493 [nucleoplasm] R-ALY-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-5225756 Ethylene mediated signaling none Arabidopsis lyrata Al_scaffold_0003_27 R-ALY-1124905-2 Al_scaffold_0003_27 [plastid stroma] R-ALY-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119519 Calvin cycle none Arabidopsis lyrata Al_scaffold_0003_2863 R-ALY-9639789 Al_scaffold_0003_2863 [plasma membrane] R-ALY-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9639861 Development of root hair none Arabidopsis lyrata Al_scaffold_0003_2903 R-ALY-1124959 Al_scaffold_0003_2903 [cytosol] R-ALY-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119623 Acyl-CoA synthetase pathway none Arabidopsis lyrata Al_scaffold_0003_3402 R-ALY-5655076-5 Al_scaffold_0003_3402 [Golgi lumen] R-ALY-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-5655101 Xyloglucan biosynthesis none Arabidopsis lyrata Al_scaffold_0003_3514 R-ALY-5138500 Al_scaffold_0003_3514 [plastid stroma] R-ALY-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119263 Arginine biosynthesis none Arabidopsis lyrata Al_scaffold_0003_3514 R-ALY-1129397 Al_scaffold_0003_3514 [cytosol] R-ALY-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119273 Lysine biosynthesis I none Arabidopsis lyrata Al_scaffold_0003_3514 R-ALY-1129397 Al_scaffold_0003_3514 [cytosol] R-ALY-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119283 Lysine biosynthesis II none Arabidopsis lyrata Al_scaffold_0003_3514 R-ALY-1129397 Al_scaffold_0003_3514 [cytosol] R-ALY-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119295 Homoserine biosynthesis none Arabidopsis lyrata Al_scaffold_0003_3514 R-ALY-5138500 Al_scaffold_0003_3514 [plastid stroma] R-ALY-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119539 Ornithine biosynthesis none Arabidopsis lyrata Al_scaffold_0003_3514 R-ALY-5138500 Al_scaffold_0003_3514 [plastid stroma] R-ALY-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119622 Arginine biosynthesis II (acetyl cycle) none Arabidopsis lyrata Al_scaffold_0003_3745 R-ALY-9618057-2 Al_scaffold_0003_3745 [cytosol] R-ALY-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9618218 Arsenic uptake and detoxification none Arabidopsis lyrata Al_scaffold_0003_3857 R-ALY-1123210 Al_scaffold_0003_3857 [cytosol] R-ALY-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119516 Trehalose biosynthesis I none Arabidopsis lyrata Al_scaffold_0003_3902 R-ALY-9640761 Al_scaffold_0003_3902 [nucleoplasm] R-ALY-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9645850 Activation of pre-replication complex none Arabidopsis lyrata Al_scaffold_0003_3902 R-ALY-9640761 Al_scaffold_0003_3902 [nucleoplasm] R-ALY-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9675824 DNA replication Initiation none Arabidopsis lyrata Al_scaffold_0003_788 R-ALY-5655007-2 Al_scaffold_0003_788 [Golgi lumen] R-ALY-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-5655010 Xylogalacturonan biosynthesis none Arabidopsis lyrata Al_scaffold_0003_789 R-ALY-1126883 Al_scaffold_0003_789 [cytosol] R-ALY-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119389 Phenylalanine biosynthesis I none Arabidopsis lyrata Al_scaffold_0003_796 R-ALY-9025331 Al_scaffold_0003_796 [cytosol] R-ALY-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119402 Phospholipid biosynthesis I none Arabidopsis lyrata Al_scaffold_0004_1351 R-ALY-4415078-3 Al_scaffold_0004_1351 [cytosol] R-ALY-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis lyrata Al_scaffold_0004_1391 R-ALY-9640886-2 Al_scaffold_0004_1391 [nucleoplasm] R-ALY-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9645850 Activation of pre-replication complex none Arabidopsis lyrata Al_scaffold_0004_1917 R-ALY-9618197-2 Al_scaffold_0004_1917 [plasma membrane] R-ALY-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9618218 Arsenic uptake and detoxification none Arabidopsis lyrata Al_scaffold_0004_1976 R-ALY-1125489-2 Al_scaffold_0004_1976 [Golgi membrane] R-ALY-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis lyrata Al_scaffold_0004_1976 R-ALY-1127743-3 Al_scaffold_0004_1976 [cytosol] R-ALY-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis lyrata Al_scaffold_0004_1976 R-ALY-1125489-2 Al_scaffold_0004_1976 [Golgi membrane] R-ALY-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis lyrata Al_scaffold_0004_1976 R-ALY-1125489-2 Al_scaffold_0004_1976 [Golgi membrane] R-ALY-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis lyrata Al_scaffold_0004_1976 R-ALY-1127743-3 Al_scaffold_0004_1976 [cytosol] R-ALY-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis lyrata Al_scaffold_0004_2365 R-ALY-1124269 Al_scaffold_0004_2365 [cytosol] R-ALY-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119456 Brassinosteroid biosynthesis II none Arabidopsis lyrata Al_scaffold_0004_2504 R-ALY-1130032-3 Al_scaffold_0004_2504 [mitochondrial inner membrane] R-ALY-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119260 Cardiolipin biosynthesis none Arabidopsis lyrata Al_scaffold_0004_2992 R-ALY-1124791-3 Al_scaffold_0004_2992 [cytosol] R-ALY-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119610 Biotin biosynthesis II none Arabidopsis lyrata Al_scaffold_0004_3181 R-ALY-5367777 Al_scaffold_0004_3181 [plastid stroma] R-ALY-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-5367729 Strigolactone biosynthesis none Arabidopsis lyrata Al_scaffold_0004_72 R-ALY-1125417 Al_scaffold_0004_72 [cytosol] R-ALY-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119265 Tetrahydrofolate biosynthesis I none Arabidopsis lyrata Al_scaffold_0004_72 R-ALY-1125417 Al_scaffold_0004_72 [cytosol] R-ALY-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119523 Tetrahydrofolate biosynthesis II none Arabidopsis lyrata Al_scaffold_0004_77 R-ALY-1127562 Al_scaffold_0004_77 [amyloplast] R-ALY-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119477 Starch biosynthesis none Arabidopsis lyrata Al_scaffold_0004_77 R-ALY-1130466 Al_scaffold_0004_77 [cytosol] R-ALY-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119477 Starch biosynthesis none Arabidopsis lyrata Al_scaffold_0004_812 R-ALY-1128637-3 Al_scaffold_0004_812 [chloroplast] R-ALY-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119494 Tryptophan biosynthesis none Arabidopsis lyrata Al_scaffold_0005_1357 R-ALY-9639874-2 Al_scaffold_0005_1357 [plasma membrane] R-ALY-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9639861 Development of root hair none Arabidopsis lyrata Al_scaffold_0005_144 R-ALY-1127353-2 Al_scaffold_0005_144 [cytosol] R-ALY-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119506 tyrosine degradation I none Arabidopsis lyrata Al_scaffold_0005_1453 R-ALY-1123470-17 Al_scaffold_0005_1453 [cytosol] R-ALY-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis lyrata Al_scaffold_0005_1453 R-ALY-1123470-17 Al_scaffold_0005_1453 [cytosol] R-ALY-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis lyrata Al_scaffold_0005_1453 R-ALY-1123470-17 Al_scaffold_0005_1453 [cytosol] R-ALY-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis lyrata Al_scaffold_0005_1457 R-ALY-1123751 Al_scaffold_0005_1457 [cytosol] R-ALY-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis lyrata Al_scaffold_0005_1457 R-ALY-1123751 Al_scaffold_0005_1457 [cytosol] R-ALY-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis lyrata Al_scaffold_0005_1457 R-ALY-1123751 Al_scaffold_0005_1457 [cytosol] R-ALY-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis lyrata Al_scaffold_0005_1460 R-ALY-1123470-15 Al_scaffold_0005_1460 [cytosol] R-ALY-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis lyrata Al_scaffold_0005_1460 R-ALY-1123470-15 Al_scaffold_0005_1460 [cytosol] R-ALY-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis lyrata Al_scaffold_0005_1460 R-ALY-1123470-15 Al_scaffold_0005_1460 [cytosol] R-ALY-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis lyrata Al_scaffold_0005_156 R-ALY-1124242 Al_scaffold_0005_156 [plastid stroma] R-ALY-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119464 Methylerythritol phosphate pathway none Arabidopsis lyrata Al_scaffold_0005_2479 R-ALY-1123470-10 Al_scaffold_0005_2479 [cytosol] R-ALY-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis lyrata Al_scaffold_0005_2479 R-ALY-1123470-10 Al_scaffold_0005_2479 [cytosol] R-ALY-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis lyrata Al_scaffold_0005_2479 R-ALY-1123470-10 Al_scaffold_0005_2479 [cytosol] R-ALY-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis lyrata Al_scaffold_0005_2899 R-ALY-9675391 Al_scaffold_0005_2899 [nucleoplasm] R-ALY-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9675508 Root elongation none Arabidopsis lyrata Al_scaffold_0005_3082 R-ALY-1129892 Al_scaffold_0005_3082 [cytosol] R-ALY-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119334 Ethylene biosynthesis from methionine none Arabidopsis lyrata Al_scaffold_0005_3082 R-ALY-1129892 Al_scaffold_0005_3082 [cytosol] R-ALY-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119624 Methionine salvage pathway none Arabidopsis lyrata Al_scaffold_0005_593 R-ALY-1123717-2 Al_scaffold_0005_593 [cytosol] R-ALY-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119395 Maackiain biosynthesis none Arabidopsis lyrata Al_scaffold_0005_593 R-ALY-1123717-2 Al_scaffold_0005_593 [cytosol] R-ALY-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119453 Medicarpin biosynthesis none Arabidopsis lyrata Al_scaffold_0005_81 R-ALY-8879061-2 LOS2 homolog [nucleoplasm] R-ALY-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-8879007 Response to cold temperature none Arabidopsis lyrata Al_scaffold_0006_1383 R-ALY-5631958 Al_scaffold_0006_1383 [cytosol] R-ALY-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119289 Arginine degradation none Arabidopsis lyrata Al_scaffold_0006_1383 R-ALY-1122345 Al_scaffold_0006_1383 [cytosol] R-ALY-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119318 Proline biosynthesis V (from arginine) none Arabidopsis lyrata Al_scaffold_0006_1383 R-ALY-1122345 Al_scaffold_0006_1383 [cytosol] R-ALY-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119631 Proline biosynthesis I none Arabidopsis lyrata Al_scaffold_0006_1385 R-ALY-1126373 Al_scaffold_0006_1385 [cytosol] R-ALY-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Arabidopsis lyrata Al_scaffold_0006_1511 R-ALY-5632238-2 Al_scaffold_0006_1511 [cytosol] R-ALY-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-5632095 Brassinosteroid signaling none Arabidopsis lyrata Al_scaffold_0006_1511 R-ALY-5632238-2 Al_scaffold_0006_1511 [cytosol] R-ALY-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-8934257 Transition from vegetative to reproductive shoot apical meristem none Arabidopsis lyrata Al_scaffold_0006_1511 R-ALY-9927894-3 Al_scaffold_0006_1511 [nucleoplasm] R-ALY-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-8934257 Transition from vegetative to reproductive shoot apical meristem none Arabidopsis lyrata Al_scaffold_0006_1511 R-ALY-5632238-2 Al_scaffold_0006_1511 [cytosol] R-ALY-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9609102 Flower development none Arabidopsis lyrata Al_scaffold_0006_1511 R-ALY-5632238-2 Al_scaffold_0006_1511 [cytosol] R-ALY-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9928831 Severe drought none Arabidopsis lyrata Al_scaffold_0006_1511 R-ALY-9927894-3 Al_scaffold_0006_1511 [nucleoplasm] R-ALY-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9928831 Severe drought none Arabidopsis lyrata Al_scaffold_0006_1694 R-ALY-9924413 WOX6 [nucleoplasm] R-ALY-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9924451 Shoot (tiller) formation and regulation of tiller angle none Arabidopsis lyrata Al_scaffold_0006_1722 R-ALY-1123046 Al_scaffold_0006_1722 [cytosol] R-ALY-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119386 UDP-N-acetylgalactosamine biosynthesis none Arabidopsis lyrata Al_scaffold_0006_2098 R-ALY-1127161-3 Al_scaffold_0006_2098 [cytosol] R-ALY-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119486 IAA biosynthesis I none Arabidopsis lyrata Al_scaffold_0006_279 R-ALY-5149646-2 Al_scaffold_0006_279 [plastid stroma] R-ALY-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119519 Calvin cycle none Arabidopsis lyrata Al_scaffold_0006_279 R-ALY-1126652-2 Al_scaffold_0006_279 [cytosol] R-ALY-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119570 Cytosolic glycolysis none Arabidopsis lyrata Al_scaffold_0006_3549 R-ALY-1127999 Al_scaffold_0006_3549 [mitochondrial inner membrane] R-ALY-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119260 Cardiolipin biosynthesis none Arabidopsis lyrata Al_scaffold_0006_997 R-ALY-1130344 Al_scaffold_0006_997 [cytosol] R-ALY-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119389 Phenylalanine biosynthesis I none Arabidopsis lyrata Al_scaffold_0007_1118 R-ALY-9640694 Al_scaffold_0007_1118 [nucleoplasm] R-ALY-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9640882 Assembly of pre-replication complex none Arabidopsis lyrata Al_scaffold_0007_1118 R-ALY-9640694 Al_scaffold_0007_1118 [nucleoplasm] R-ALY-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9645850 Activation of pre-replication complex none Arabidopsis lyrata Al_scaffold_0007_15 R-ALY-5221147-2 Al_scaffold_0007_15 [cytosol] R-ALY-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis lyrata Al_scaffold_0007_2057 R-ALY-1128069 Al_scaffold_0007_2057 [cytosol] R-ALY-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Arabidopsis lyrata Al_scaffold_0007_2057 R-ALY-1128069 Al_scaffold_0007_2057 [cytosol] R-ALY-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Arabidopsis lyrata Al_scaffold_0007_2074 R-ALY-1122605 Al_scaffold_0007_2074 [cytosol] R-ALY-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119341 Galactosylcyclitol biosynthesis none Arabidopsis lyrata Al_scaffold_0007_2104 R-ALY-1125489-3 Al_scaffold_0007_2104 [Golgi membrane] R-ALY-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis lyrata Al_scaffold_0007_2104 R-ALY-1127743-2 Al_scaffold_0007_2104 [cytosol] R-ALY-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis lyrata Al_scaffold_0007_2104 R-ALY-1125489-3 Al_scaffold_0007_2104 [Golgi membrane] R-ALY-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis lyrata Al_scaffold_0007_2104 R-ALY-1125489-3 Al_scaffold_0007_2104 [Golgi membrane] R-ALY-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis lyrata Al_scaffold_0007_2104 R-ALY-1127743-2 Al_scaffold_0007_2104 [cytosol] R-ALY-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis lyrata Al_scaffold_0007_2194 R-ALY-6788026-2 Al_scaffold_0007_2194 [cytosol] R-ALY-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-6788019 Salicylic acid signaling none Arabidopsis lyrata Al_scaffold_0007_2541 R-ALY-1127338 Al_scaffold_0007_2541 [mitochondrial inner membrane] R-ALY-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119402 Phospholipid biosynthesis I none Arabidopsis lyrata Al_scaffold_0007_2641 R-ALY-5632301-2 Al_scaffold_0007_2641 [nucleoplasm] R-ALY-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-5632095 Brassinosteroid signaling none Arabidopsis lyrata Al_scaffold_0007_2641 R-ALY-5632301-2 Al_scaffold_0007_2641 [nucleoplasm] R-ALY-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-5654828 Strigolactone signaling none Arabidopsis lyrata Al_scaffold_0007_2641 R-ALY-5632301-2 Al_scaffold_0007_2641 [nucleoplasm] R-ALY-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-6787011 Jasmonic acid signaling none Arabidopsis lyrata Al_scaffold_0007_269 R-ALY-9035593-2 Al_scaffold_0007_269 [cytosol] R-ALY-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9035605 Regulation of seed size none Arabidopsis lyrata Al_scaffold_0007_269 R-ALY-9035634-2 Al_scaffold_0007_269 [nucleoplasm] R-ALY-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9035605 Regulation of seed size none Arabidopsis lyrata Al_scaffold_0007_269 R-ALY-9035593-2 Al_scaffold_0007_269 [cytosol] R-ALY-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9608575 Reproductive meristem phase change none Arabidopsis lyrata Al_scaffold_0007_269 R-ALY-9035634-2 Al_scaffold_0007_269 [nucleoplasm] R-ALY-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9608575 Reproductive meristem phase change none Arabidopsis lyrata Al_scaffold_0007_3048 R-ALY-1125584-3 Al_scaffold_0007_3048 [plastid stroma] R-ALY-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119509 Histidine biosynthesis I none Arabidopsis lyrata Al_scaffold_0007_3056 R-ALY-1125584-4 Al_scaffold_0007_3056 [plastid stroma] R-ALY-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119509 Histidine biosynthesis I none Arabidopsis lyrata Al_scaffold_0007_3395 R-ALY-3315084 Al_scaffold_0007_3395 [cytosol] R-ALY-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119342 Gamma-glutamyl cycle none Arabidopsis lyrata Al_scaffold_0007_389 R-ALY-1127815 Al_scaffold_0007_389 [cytosol] R-ALY-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119450 Homocysteine biosynthesis none Arabidopsis lyrata Al_scaffold_0007_743 R-ALY-1124249 Al_scaffold_0007_743 [cytosol] R-ALY-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis lyrata Al_scaffold_0007_743 R-ALY-1124249 Al_scaffold_0007_743 [cytosol] R-ALY-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis lyrata Al_scaffold_0008_1028 R-ALY-9645950-2 Al_scaffold_0008_1028 [nucleoplasm] R-ALY-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9645850 Activation of pre-replication complex none Arabidopsis lyrata Al_scaffold_0008_1028 R-ALY-9645950-2 Al_scaffold_0008_1028 [nucleoplasm] R-ALY-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9675815 Leading strand synthesis none Arabidopsis lyrata Al_scaffold_0008_1028 R-ALY-9645950-2 Al_scaffold_0008_1028 [nucleoplasm] R-ALY-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9675824 DNA replication Initiation none Arabidopsis lyrata Al_scaffold_0008_1028 R-ALY-9645950-2 Al_scaffold_0008_1028 [nucleoplasm] R-ALY-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9675885 Lagging strand synthesis none Arabidopsis lyrata Al_scaffold_0008_1162 R-ALY-9640789 Al_scaffold_0008_1162 [nucleoplasm] R-ALY-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9640760 G1 phase none Arabidopsis lyrata Al_scaffold_0008_1174 R-ALY-9645950 Al_scaffold_0008_1174 [nucleoplasm] R-ALY-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9645850 Activation of pre-replication complex none Arabidopsis lyrata Al_scaffold_0008_1174 R-ALY-9645950 Al_scaffold_0008_1174 [nucleoplasm] R-ALY-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9675815 Leading strand synthesis none Arabidopsis lyrata Al_scaffold_0008_1174 R-ALY-9645950 Al_scaffold_0008_1174 [nucleoplasm] R-ALY-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9675824 DNA replication Initiation none Arabidopsis lyrata Al_scaffold_0008_1174 R-ALY-9645950 Al_scaffold_0008_1174 [nucleoplasm] R-ALY-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9675885 Lagging strand synthesis none Arabidopsis lyrata Al_scaffold_0008_1192 R-ALY-9675790-2 Al_scaffold_0008_1192 [nucleoplasm] R-ALY-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9675824 DNA replication Initiation none Arabidopsis lyrata Al_scaffold_0008_132 R-ALY-6787119-4 Al_scaffold_0008_132 [nucleoplasm] R-ALY-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-6787011 Jasmonic acid signaling none Arabidopsis lyrata Al_scaffold_0008_1748 R-ALY-9025699-3 Al_scaffold_0008_1748 [plasma membrane] R-ALY-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-8858053 Polar auxin transport none Arabidopsis lyrata Al_scaffold_0008_1748 R-ALY-9025699-3 Al_scaffold_0008_1748 [plasma membrane] R-ALY-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9025727 Iron uptake and transport in root vascular system none Arabidopsis lyrata Al_scaffold_0008_2175 R-ALY-1126488-4 Al_scaffold_0008_2175 [mitochondrial inner membrane] R-ALY-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119402 Phospholipid biosynthesis I none Arabidopsis lyrata Al_scaffold_0008_2452 R-ALY-1123470-16 Al_scaffold_0008_2452 [cytosol] R-ALY-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119292 Cytokinins 7-N-glucoside biosynthesis none Arabidopsis lyrata Al_scaffold_0008_2452 R-ALY-1123470-16 Al_scaffold_0008_2452 [cytosol] R-ALY-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119375 Cytokinins 9-N-glucoside biosynthesis none Arabidopsis lyrata Al_scaffold_0008_2452 R-ALY-1123470-16 Al_scaffold_0008_2452 [cytosol] R-ALY-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119473 Cytokinins-O-glucoside biosynthesis none Arabidopsis lyrata Al_scaffold_0008_2498 R-ALY-9639874 Al_scaffold_0008_2498 [plasma membrane] R-ALY-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9639861 Development of root hair none Arabidopsis lyrata Al_scaffold_0008_2924 R-ALY-1128989 Al_scaffold_0008_2924 [plastid stroma] R-ALY-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119509 Histidine biosynthesis I none Arabidopsis lyrata Al_scaffold_0008_3090 R-ALY-9640777-3 Al_scaffold_0008_3090 [nucleoplasm] R-ALY-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9640760 G1 phase none Arabidopsis lyrata Al_scaffold_0008_3090 R-ALY-9640777-3 Al_scaffold_0008_3090 [nucleoplasm] R-ALY-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9640887 G1/S transition none Arabidopsis lyrata Al_scaffold_0008_326 R-ALY-1128857-2 Al_scaffold_0008_326 [cytosol] R-ALY-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119609 Phaseic acid biosynthesis none Arabidopsis lyrata Al_scaffold_0008_3299 R-ALY-1129282 Al_scaffold_0008_3299 [cytosol] R-ALY-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis lyrata Al_scaffold_0008_3299 R-ALY-1129282 Al_scaffold_0008_3299 [cytosol] R-ALY-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis lyrata Al_scaffold_0008_3334 R-ALY-8868994-2 Al_scaffold_0008_3334 [endoplasmic reticulum membrane] R-ALY-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-8868949 Intracellular auxin transport none Arabidopsis lyrata Al_scaffold_0008_506 R-ALY-1124484 Al_scaffold_0008_506 [plastid stroma] R-ALY-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119519 Calvin cycle none Arabidopsis lyrata Al_scaffold_0008_517 R-ALY-1125489 Al_scaffold_0008_517 [Golgi membrane] R-ALY-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis lyrata Al_scaffold_0008_517 R-ALY-1127743 Al_scaffold_0008_517 [cytosol] R-ALY-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119428 GDP-D-rhamnose biosynthesis none Arabidopsis lyrata Al_scaffold_0008_517 R-ALY-1125489 Al_scaffold_0008_517 [Golgi membrane] R-ALY-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119574 UDP-L-arabinose biosynthesis and transport none Arabidopsis lyrata Al_scaffold_0008_517 R-ALY-1125489 Al_scaffold_0008_517 [Golgi membrane] R-ALY-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis lyrata Al_scaffold_0008_517 R-ALY-1127743 Al_scaffold_0008_517 [cytosol] R-ALY-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Arabidopsis lyrata Al_scaffold_0008_709 R-ALY-1123819 Al_scaffold_0008_709 [plastid stroma] R-ALY-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119464 Methylerythritol phosphate pathway none Arabidopsis lyrata Al_scaffold_0009_13 R-ALY-1124939 Al_scaffold_0009_13 [cytosol] R-ALY-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119540 Leucine biosynthesis none Arabidopsis lyrata Al_scaffold_0048_9 R-ALY-4415078 Al_scaffold_0048_9 [cytosol] R-ALY-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-3899351 Abscisic acid (ABA) mediated signaling none Arabidopsis lyrata Al_scaffold_0240_1 R-ALY-9826696-3 Al_scaffold_0240_1 [nucleoplasm] R-ALY-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Arabidopsis lyrata Al_scaffold_0242_2 R-ALY-5683263-2 Al_scaffold_0242_2 [cytosol] R-ALY-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-1119586 Cyanate degradation none Arabidopsis lyrata Al_scaffold_0706_1 R-ALY-9645907-2 Al_scaffold_0706_1 [nucleoplasm] R-ALY-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9645850 Activation of pre-replication complex none Arabidopsis lyrata Al_scaffold_0706_1 R-ALY-9645907-2 Al_scaffold_0706_1 [nucleoplasm] R-ALY-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-ALY-9675824 DNA replication Initiation none Arabidopsis lyrata B456_001G000900 R-GRA-9640708-3 phospho-B456_001G000900 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_001G000900 R-GRA-9640770-3 B456_001G000900 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_001G000900 R-GRA-9640708-3 phospho-B456_001G000900 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_001G006400 R-GRA-5633387-3 B456_001G006400 [mitochondrial matrix] R-GRA-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119445 Beta-alanine biosynthesis II none Gossypium raimondii B456_001G010700 R-GRA-1127015-2 B456_001G010700 [cytosol] R-GRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119334 Ethylene biosynthesis from methionine none Gossypium raimondii B456_001G010700 R-GRA-1127015-2 B456_001G010700 [cytosol] R-GRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119624 Methionine salvage pathway none Gossypium raimondii B456_001G011800 R-GRA-9658664-2 B456_001G011800 [plasma membrane] R-GRA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119567 Beta-alanine biosynthesis I none Gossypium raimondii B456_001G013500 R-GRA-4415101-2 B456_001G013500 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_001G013500 R-GRA-4415101-2 B456_001G013500 [cytosol] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_001G015800 R-GRA-5084918-2 B456_001G015800 [cytosol] R-GRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119624 Methionine salvage pathway none Gossypium raimondii B456_001G017400 R-GRA-9607102 B456_001G017400 [mitochondrion] R-GRA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9607185 Generation of superoxide radicals none Gossypium raimondii B456_001G017700 R-GRA-1129561-4 B456_001G017700 [cytosol] R-GRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119452 Galactose degradation II none Gossypium raimondii B456_001G017700 R-GRA-1129561-4 B456_001G017700 [cytosol] R-GRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119465 Sucrose biosynthesis none Gossypium raimondii B456_001G024300 R-GRA-9826667 B456_001G024300 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_001G027000 R-GRA-5367761-2 B456_001G027000 [plastid stroma] R-GRA-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5367729 Strigolactone biosynthesis none Gossypium raimondii B456_001G028100 R-GRA-1125734 B456_001G028100 [cytosol] R-GRA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119281 Aspartate biosynthesis I none Gossypium raimondii B456_001G028100 R-GRA-5632000 B456_001G028100 [plastid stroma] R-GRA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119553 Asparagine biosynthesis none Gossypium raimondii B456_001G028900 R-GRA-1124809-4 B456_001G028900 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_001G029600 R-GRA-5631958 B456_001G029600 [cytosol] R-GRA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119289 Arginine degradation none Gossypium raimondii B456_001G029600 R-GRA-1122345 B456_001G029600 [cytosol] R-GRA-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119318 Proline biosynthesis V (from arginine) none Gossypium raimondii B456_001G029600 R-GRA-1122345 B456_001G029600 [cytosol] R-GRA-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119631 Proline biosynthesis I none Gossypium raimondii B456_001G037700 R-GRA-6787933-2 B456_001G037700 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_001G038000 R-GRA-1128054 B456_001G038000 [mitochondrial matrix] R-GRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119479 Valine degradation none Gossypium raimondii B456_001G038600 R-GRA-1128173 B456_001G038600 [cytosol] R-GRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119437 Glutathione redox reactions I none Gossypium raimondii B456_001G046400 R-GRA-8879061 LOS2 homolog [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_001G046400 R-GRA-8878987 B456_001G046400 [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_001G049800 R-GRA-9826639-5 B456_001G049800 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_001G051500 R-GRA-9608930 B456_001G051500 [nucleoplasm] R-GRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934036 Long day regulated expression of florigens none Gossypium raimondii B456_001G052700 R-GRA-1125399 B456_001G052700 [plastid] R-GRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119403 Removal of superoxide radicals none Gossypium raimondii B456_001G054600 R-GRA-5608102 B456_001G054600 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_001G054600 R-GRA-1123690-3 B456_001G054600 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_001G055800 R-GRA-4827081 B456_001G055800 [plastid stroma] R-GRA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-4827054 Tetrapyrrole biosynthesis I none Gossypium raimondii B456_001G059900 R-GRA-5138489 B456_001G059900 [plastid stroma] R-GRA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119263 Arginine biosynthesis none Gossypium raimondii B456_001G059900 R-GRA-1127893 B456_001G059900 [cytosol] R-GRA-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119444 Canavanine biosynthesis none Gossypium raimondii B456_001G059900 R-GRA-5138489 B456_001G059900 [plastid stroma] R-GRA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119622 Arginine biosynthesis II (acetyl cycle) none Gossypium raimondii B456_001G059900 R-GRA-5138489 B456_001G059900 [plastid stroma] R-GRA-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5633340 Citrulline-nitric oxide cycle none Gossypium raimondii B456_001G063900 R-GRA-1126395-5 B456_001G063900 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_001G064000 R-GRA-1127151 B456_001G064000 [cytosol] R-GRA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119384 NAD biosynthesis I (from aspartate) none Gossypium raimondii B456_001G065900 R-GRA-1125533 B456_001G065900 [cytosol] R-GRA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119304 Putrescine biosynthesis II none Gossypium raimondii B456_001G067400 R-GRA-1126157 B456_001G067400 [cytosol] R-GRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119460 Isoleucine biosynthesis from threonine none Gossypium raimondii B456_001G067400 R-GRA-1126157 B456_001G067400 [cytosol] R-GRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119600 Valine biosynthesis none Gossypium raimondii B456_001G068600 R-GRA-1127254 B456_001G068600 [cytosol] R-GRA-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119317 Spermine biosynthesis none Gossypium raimondii B456_001G068600 R-GRA-1127254 B456_001G068600 [cytosol] R-GRA-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119343 Spermidine biosynthesis none Gossypium raimondii B456_001G070500 R-GRA-1125638-2 B456_001G070500 [cytosol] R-GRA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119516 Trehalose biosynthesis I none Gossypium raimondii B456_001G071200 R-GRA-1129514-2 B456_001G071200 [chloroplast] R-GRA-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119579 Glycine betaine biosynthesis III none Gossypium raimondii B456_001G072600 R-GRA-5655076 B456_001G072600 [Golgi lumen] R-GRA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5655101 Xyloglucan biosynthesis none Gossypium raimondii B456_001G072700 R-GRA-1122934-2 B456_001G072700 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_001G076700 R-GRA-9826682-2 B456_001G076700 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_001G077900 R-GRA-9681886-3 B456_001G077900 [cytosol] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_001G079900 R-GRA-5632238-3 B456_001G079900 [cytosol] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_001G079900 R-GRA-5632238-3 B456_001G079900 [cytosol] R-GRA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934257 Transition from vegetative to reproductive shoot apical meristem none Gossypium raimondii B456_001G079900 R-GRA-9927894-3 B456_001G079900 [nucleoplasm] R-GRA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934257 Transition from vegetative to reproductive shoot apical meristem none Gossypium raimondii B456_001G079900 R-GRA-5632238-3 B456_001G079900 [cytosol] R-GRA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9609102 Flower development none Gossypium raimondii B456_001G079900 R-GRA-5632238-3 B456_001G079900 [cytosol] R-GRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928831 Severe drought none Gossypium raimondii B456_001G079900 R-GRA-9927894-3 B456_001G079900 [nucleoplasm] R-GRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928831 Severe drought none Gossypium raimondii B456_001G080700 R-GRA-1124291 B456_001G080700 [cytosol] R-GRA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Gossypium raimondii B456_001G080700 R-GRA-1124291 B456_001G080700 [cytosol] R-GRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119438 Secologanin and strictosidine biosynthesis none Gossypium raimondii B456_001G080700 R-GRA-1124291 B456_001G080700 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_001G083400 R-GRA-1128815 B456_001G083400 [cytosol] R-GRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119452 Galactose degradation II none Gossypium raimondii B456_001G083400 R-GRA-1128815 B456_001G083400 [cytosol] R-GRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119465 Sucrose biosynthesis none Gossypium raimondii B456_001G083700 R-GRA-1124861 B456_001G083700 [plastid stroma] R-GRA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119449 Carotenoid biosynthesis none Gossypium raimondii B456_001G085300 R-GRA-8868990-2 B456_001G085300 [endoplasmic reticulum membrane] R-GRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8868949 Intracellular auxin transport none Gossypium raimondii B456_001G088100 R-GRA-1130348 B456_001G088100 [cytosol] R-GRA-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Gossypium raimondii B456_001G090200 R-GRA-9681910-2 B456_001G090200 [Golgi membrane] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_001G092000 R-GRA-1128974 B456_001G092000 [cytosol] R-GRA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119287 Vitamin E biosynthesis none Gossypium raimondii B456_001G092000 R-GRA-1128974 B456_001G092000 [cytosol] R-GRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119506 tyrosine degradation I none Gossypium raimondii B456_001G096000 R-GRA-9611549-3 phospho-phosphorylated-CERK1 [plasma membrane] R-GRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Gossypium raimondii B456_001G096300 R-GRA-1122827-2 B456_001G096300 [cytosol] R-GRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119334 Ethylene biosynthesis from methionine none Gossypium raimondii B456_001G096400 R-GRA-1122827-5 B456_001G096400 [cytosol] R-GRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119334 Ethylene biosynthesis from methionine none Gossypium raimondii B456_001G098700 R-GRA-1124959 B456_001G098700 [cytosol] R-GRA-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119623 Acyl-CoA synthetase pathway none Gossypium raimondii B456_001G099100 R-GRA-9916125 B456_001G099100 [nucleoplasm] R-GRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9916190 Root angle formation: elongation and curvature response none Gossypium raimondii B456_001G099100 R-GRA-9916231 B456_001G099100 [cytosol] R-GRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9916190 Root angle formation: elongation and curvature response none Gossypium raimondii B456_001G099100 R-GRA-9916199 phospho-B456_001G099100 [cytosol] R-GRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9916190 Root angle formation: elongation and curvature response none Gossypium raimondii B456_001G100900 R-GRA-9639789-2 B456_001G100900 [plasma membrane] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_001G106500 R-GRA-9639874 B456_001G106500 [plasma membrane] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_001G107900 R-GRA-9826691 B456_001G107900 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_001G109500 R-GRA-9611544-2 SPL11 [nucleoplasm] R-GRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Gossypium raimondii B456_001G109500 R-GRA-9611440-2 phospho-phosphorylated-SPL11 [nucleoplasm] R-GRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Gossypium raimondii B456_001G113200 R-GRA-1123470 B456_001G113200 [cytosol] R-GRA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119292 Cytokinins 7-N-glucoside biosynthesis none Gossypium raimondii B456_001G113200 R-GRA-1123470 B456_001G113200 [cytosol] R-GRA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119375 Cytokinins 9-N-glucoside biosynthesis none Gossypium raimondii B456_001G113200 R-GRA-1123470 B456_001G113200 [cytosol] R-GRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119473 Cytokinins-O-glucoside biosynthesis none Gossypium raimondii B456_001G113300 R-GRA-1123470-4 B456_001G113300 [cytosol] R-GRA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119292 Cytokinins 7-N-glucoside biosynthesis none Gossypium raimondii B456_001G113300 R-GRA-1123470-4 B456_001G113300 [cytosol] R-GRA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119375 Cytokinins 9-N-glucoside biosynthesis none Gossypium raimondii B456_001G113300 R-GRA-1123470-4 B456_001G113300 [cytosol] R-GRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119473 Cytokinins-O-glucoside biosynthesis none Gossypium raimondii B456_001G113800 R-GRA-1123470-8 B456_001G113800 [cytosol] R-GRA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119292 Cytokinins 7-N-glucoside biosynthesis none Gossypium raimondii B456_001G113800 R-GRA-1123470-8 B456_001G113800 [cytosol] R-GRA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119375 Cytokinins 9-N-glucoside biosynthesis none Gossypium raimondii B456_001G113800 R-GRA-1123470-8 B456_001G113800 [cytosol] R-GRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119473 Cytokinins-O-glucoside biosynthesis none Gossypium raimondii B456_001G113900 R-GRA-1123470-7 B456_001G113900 [cytosol] R-GRA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119292 Cytokinins 7-N-glucoside biosynthesis none Gossypium raimondii B456_001G113900 R-GRA-1123470-7 B456_001G113900 [cytosol] R-GRA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119375 Cytokinins 9-N-glucoside biosynthesis none Gossypium raimondii B456_001G113900 R-GRA-1123470-7 B456_001G113900 [cytosol] R-GRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119473 Cytokinins-O-glucoside biosynthesis none Gossypium raimondii B456_001G114000 R-GRA-1123470-5 B456_001G114000 [cytosol] R-GRA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119292 Cytokinins 7-N-glucoside biosynthesis none Gossypium raimondii B456_001G114000 R-GRA-1123470-5 B456_001G114000 [cytosol] R-GRA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119375 Cytokinins 9-N-glucoside biosynthesis none Gossypium raimondii B456_001G114000 R-GRA-1123470-5 B456_001G114000 [cytosol] R-GRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119473 Cytokinins-O-glucoside biosynthesis none Gossypium raimondii B456_001G115500 R-GRA-1123998-2 B456_001G115500 [chloroplast] R-GRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119494 Tryptophan biosynthesis none Gossypium raimondii B456_001G116500 R-GRA-1125804 B456_001G116500 [cytosol] R-GRA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119300 Glycolipid desaturation none Gossypium raimondii B456_001G118900 R-GRA-1124560-2 B456_001G118900 [cytosol] R-GRA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119563 UDP-D-xylose biosynthesis none Gossypium raimondii B456_001G118900 R-GRA-9681903-2 B456_001G118900 [Golgi lumen] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_001G118900 R-GRA-1124560-2 B456_001G118900 [cytosol] R-GRA-5654894 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654894 UDP-D-apiose biosynthesis none Gossypium raimondii B456_001G121800 R-GRA-9608694-2 B456_001G121800 [cytosol] R-GRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928831 Severe drought none Gossypium raimondii B456_001G121800 R-GRA-9928774-2 B456_001G121800 [nucleoplasm] R-GRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928831 Severe drought none Gossypium raimondii B456_001G122100 R-GRA-6787863-2 B456_001G122100 [nucleoplasm] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_001G123400 R-GRA-1127161-2 B456_001G123400 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_001G123900 R-GRA-9640739-4 B456_001G123900 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_001G126900 R-GRA-1126604-2 B456_001G126900 [cytosol] R-GRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119438 Secologanin and strictosidine biosynthesis none Gossypium raimondii B456_001G127000 R-GRA-9826669-2 OsYABBY6 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_001G127800 R-GRA-1250418-2 B456_001G127800 [cytosol] R-GRA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119374 Abscisic acid biosynthesis none Gossypium raimondii B456_001G127800 R-GRA-1129637-2 B456_001G127800 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_001G128200 R-GRA-1125151-4 B456_001G128200 [cytosol] R-GRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119400 Methionine biosynthesis II none Gossypium raimondii B456_001G128200 R-GRA-1125151-4 B456_001G128200 [cytosol] R-GRA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119501 S-adenosyl-L-methionine cycle none Gossypium raimondii B456_001G129400 R-GRA-1126883-3 B456_001G129400 [cytosol] R-GRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119389 Phenylalanine biosynthesis I none Gossypium raimondii B456_001G132200 R-GRA-9927865 B456_001G132200 [nucleoplasm] R-GRA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934257 Transition from vegetative to reproductive shoot apical meristem none Gossypium raimondii B456_001G133000 R-GRA-4723690 B456_001G133000 [plastid stroma] R-GRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119464 Methylerythritol phosphate pathway none Gossypium raimondii B456_001G133200 R-GRA-1127373 B456_001G133200 [cytosol] R-GRA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119297 Beta-alanine biosynthesis III none Gossypium raimondii B456_001G136900 R-GRA-1123943 B456_001G136900 [plastid] R-GRA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119365 Lysine degradation II none Gossypium raimondii B456_001G141300 R-GRA-1126830-2 B456_001G141300 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_001G146800 R-GRA-1128366-4 B456_001G146800 [cytosol] R-GRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119334 Ethylene biosynthesis from methionine none Gossypium raimondii B456_001G146800 R-GRA-1128366-4 B456_001G146800 [cytosol] R-GRA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119501 S-adenosyl-L-methionine cycle none Gossypium raimondii B456_001G146800 R-GRA-1128366-4 B456_001G146800 [cytosol] R-GRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119624 Methionine salvage pathway none Gossypium raimondii B456_001G146800 R-GRA-9025738-2 B456_001G146800 [cytosol] R-GRA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9025754 Mugineic acid biosynthesis none Gossypium raimondii B456_001G148100 R-GRA-1129914-2 B456_001G148100 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_001G148500 R-GRA-9826674 B456_001G148500 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_001G148900 R-GRA-9916298 OsEXPA3 [extracellular region] R-GRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9916190 Root angle formation: elongation and curvature response none Gossypium raimondii B456_001G149300 R-GRA-1129161 B456_001G149300 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_001G153500 R-GRA-1126671 B456_001G153500 [cytosol] R-GRA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119534 Pyridoxal 5'-phosphate salvage pathway none Gossypium raimondii B456_001G153500 R-GRA-1126671 B456_001G153500 [cytosol] R-GRA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119594 Pyridoxal 5'-phosphate biosynthesis none Gossypium raimondii B456_001G153900 R-GRA-9675365-3 B456_001G153900 [nucleoplasm] R-GRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675508 Root elongation none Gossypium raimondii B456_001G155800 R-GRA-9826647-3 B456_001G155800 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_001G156600 R-GRA-6787202-3 B456_001G156600 [cytosol] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_001G170700 R-GRA-5146758-2 B456_001G170700 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_001G174300 R-GRA-1126421-4 B456_001G174300 [cytosol] R-GRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119428 GDP-D-rhamnose biosynthesis none Gossypium raimondii B456_001G174300 R-GRA-1126421-4 B456_001G174300 [cytosol] R-GRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Gossypium raimondii B456_001G174400 R-GRA-1128197 B456_001G174400 [plastid stroma] R-GRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119430 Chorismate biosynthesis none Gossypium raimondii B456_001G174600 R-GRA-1130247-3 B456_001G174600 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_001G176500 R-GRA-9826639-3 B456_001G176500 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_001G176700 R-GRA-6786994-3 B456_001G176700 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_001G179600 R-GRA-5632268-5 B456_001G179600 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_001G179900 R-GRA-1129896 B456_001G179900 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_001G180000 R-GRA-1129896-2 B456_001G180000 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_001G181800 R-GRA-1128385-3 B456_001G181800 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_001G182500 R-GRA-1122881 B456_001G182500 [cytosol] R-GRA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Gossypium raimondii B456_001G182500 R-GRA-1122881 B456_001G182500 [cytosol] R-GRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119438 Secologanin and strictosidine biosynthesis none Gossypium raimondii B456_001G182500 R-GRA-1122881 B456_001G182500 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_001G185900 R-GRA-1126091 B456_001G185900 [cytosol] R-GRA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119394 Pantothenate and coenzyme A biosynthesis III none Gossypium raimondii B456_001G185900 R-GRA-1126091 B456_001G185900 [cytosol] R-GRA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119496 Pantothenate biosynthesis I none Gossypium raimondii B456_001G185900 R-GRA-1126091 B456_001G185900 [cytosol] R-GRA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119544 Pantothenate biosynthesis II none Gossypium raimondii B456_001G185900 R-GRA-1126091 B456_001G185900 [cytosol] R-GRA-1119568 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119568 Pantothenate biosynthesis III none Gossypium raimondii B456_001G189500 R-GRA-5655007-3 B456_001G189500 [Golgi lumen] R-GRA-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5655010 Xylogalacturonan biosynthesis none Gossypium raimondii B456_001G189600 R-GRA-5655007-4 B456_001G189600 [Golgi lumen] R-GRA-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5655010 Xylogalacturonan biosynthesis none Gossypium raimondii B456_001G191000 R-GRA-1123161-2 B456_001G191000 [chloroplast] R-GRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119494 Tryptophan biosynthesis none Gossypium raimondii B456_001G191600 R-GRA-9916125-2 B456_001G191600 [nucleoplasm] R-GRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9916190 Root angle formation: elongation and curvature response none Gossypium raimondii B456_001G191600 R-GRA-9916231-2 B456_001G191600 [cytosol] R-GRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9916190 Root angle formation: elongation and curvature response none Gossypium raimondii B456_001G191600 R-GRA-9916199-2 phospho-B456_001G191600 [cytosol] R-GRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9916190 Root angle formation: elongation and curvature response none Gossypium raimondii B456_001G196500 R-GRA-9681910 B456_001G196500 [Golgi membrane] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_001G197200 R-GRA-5632238-2 B456_001G197200 [cytosol] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_001G197200 R-GRA-5632238-2 B456_001G197200 [cytosol] R-GRA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934257 Transition from vegetative to reproductive shoot apical meristem none Gossypium raimondii B456_001G197200 R-GRA-9927894-2 B456_001G197200 [nucleoplasm] R-GRA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934257 Transition from vegetative to reproductive shoot apical meristem none Gossypium raimondii B456_001G197200 R-GRA-5632238-2 B456_001G197200 [cytosol] R-GRA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9609102 Flower development none Gossypium raimondii B456_001G197200 R-GRA-5632238-2 B456_001G197200 [cytosol] R-GRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928831 Severe drought none Gossypium raimondii B456_001G197200 R-GRA-9927894-2 B456_001G197200 [nucleoplasm] R-GRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928831 Severe drought none Gossypium raimondii B456_001G199900 R-GRA-8868994 B456_001G199900 [endoplasmic reticulum membrane] R-GRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8868949 Intracellular auxin transport none Gossypium raimondii B456_001G201400 R-GRA-5632238 B456_001G201400 [cytosol] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_001G201400 R-GRA-5632238 B456_001G201400 [cytosol] R-GRA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934257 Transition from vegetative to reproductive shoot apical meristem none Gossypium raimondii B456_001G201400 R-GRA-9927894 B456_001G201400 [nucleoplasm] R-GRA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934257 Transition from vegetative to reproductive shoot apical meristem none Gossypium raimondii B456_001G201400 R-GRA-5632238 B456_001G201400 [cytosol] R-GRA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9609102 Flower development none Gossypium raimondii B456_001G201400 R-GRA-5632238 B456_001G201400 [cytosol] R-GRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928831 Severe drought none Gossypium raimondii B456_001G201400 R-GRA-9927894 B456_001G201400 [nucleoplasm] R-GRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928831 Severe drought none Gossypium raimondii B456_001G201800 R-GRA-8987531 B456_001G201800 [chloroplast] R-GRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119312 Photorespiration none Gossypium raimondii B456_001G201800 R-GRA-1125951 B456_001G201800 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_001G202100 R-GRA-1129184-3 B456_001G202100 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_001G202100 R-GRA-1129184-3 B456_001G202100 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_001G202100 R-GRA-5606505-3 B456_001G202100 [plastid stroma] R-GRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119419 Lysine biosynthesis VI none Gossypium raimondii B456_001G203300 R-GRA-1127192 B456_001G203300 [cytosol] R-GRA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119291 Nitrate assimilation none Gossypium raimondii B456_001G203300 R-GRA-1127192 B456_001G203300 [cytosol] R-GRA-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119293 Glutamine biosynthesis I none Gossypium raimondii B456_001G203300 R-GRA-1127192 B456_001G203300 [cytosol] R-GRA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119443 Ammonia assimilation cycle none Gossypium raimondii B456_001G203800 R-GRA-1130416-3 B456_001G203800 [mitochondrial matrix] R-GRA-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119337 Proline degradation none Gossypium raimondii B456_001G203800 R-GRA-1130416-3 B456_001G203800 [mitochondrial matrix] R-GRA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119495 Citrulline biosynthesis none Gossypium raimondii B456_001G204500 R-GRA-5608169 B456_001G204500 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_001G208000 R-GRA-9681910-3 B456_001G208000 [Golgi membrane] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_001G213900 R-GRA-1125187 B456_001G213900 [cytosol] R-GRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119276 Choline biosynthesis III none Gossypium raimondii B456_001G214800 R-GRA-9826659 B456_001G214800 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_001G217400 R-GRA-1122827-6 B456_001G217400 [cytosol] R-GRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119334 Ethylene biosynthesis from methionine none Gossypium raimondii B456_001G218100 R-GRA-1124083 B456_001G218100 [cytosol] R-GRA-1119323 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119323 Lipid-A-precursor biosynthesis none Gossypium raimondii B456_001G222700 R-GRA-1130084 B456_001G222700 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_001G222800 R-GRA-1130084-2 B456_001G222800 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_001G224500 R-GRA-1127443-3 B456_001G224500 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_001G224500 R-GRA-1122818-3 B456_001G224500 [cytosol] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_001G232100 R-GRA-9645907 B456_001G232100 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_001G232100 R-GRA-9645907 B456_001G232100 [nucleoplasm] R-GRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675824 DNA replication Initiation none Gossypium raimondii B456_001G232300 R-GRA-9645907-2 B456_001G232300 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_001G232300 R-GRA-9645907-2 B456_001G232300 [nucleoplasm] R-GRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675824 DNA replication Initiation none Gossypium raimondii B456_001G238100 R-GRA-1128528 B456_001G238100 [plasma membrane] R-GRA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119314 Cellulose biosynthesis none Gossypium raimondii B456_001G239200 R-GRA-1130101-3 B456_001G239200 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_001G242000 R-GRA-5679502 B456_001G242000 [plastid stroma] R-GRA-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5367729 Strigolactone biosynthesis none Gossypium raimondii B456_001G242800 R-GRA-1128214 B456_001G242800 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_001G242900 R-GRA-1122892-5 B456_001G242900 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_001G242900 R-GRA-1122892-5 B456_001G242900 [nucleoplasm] R-GRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030557 Lateral root initiation none Gossypium raimondii B456_001G242900 R-GRA-1122892-5 B456_001G242900 [nucleoplasm] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_001G243600 R-GRA-1125093-2 B456_001G243600 [cytosol] R-GRA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119456 Brassinosteroid biosynthesis II none Gossypium raimondii B456_001G247400 R-GRA-1124145 B456_001G247400 [mitochondrial matrix] R-GRA-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119445 Beta-alanine biosynthesis II none Gossypium raimondii B456_001G252700 R-GRA-6786994-2 B456_001G252700 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_001G252900 R-GRA-6786994-4 B456_001G252900 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_001G254900 R-GRA-5632268-2 B456_001G254900 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_001G256800 R-GRA-4752546-6 B456_001G256800 [plastid stroma] R-GRA-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119498 Phylloquinone biosynthesis none Gossypium raimondii B456_001G262200 R-GRA-1122347 B456_001G262200 [cytosol] R-GRA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119384 NAD biosynthesis I (from aspartate) none Gossypium raimondii B456_001G262400 R-GRA-1130327-7 B456_001G262400 [cytosol] R-GRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119586 Cyanate degradation none Gossypium raimondii B456_001G267500 R-GRA-1122601 B456_001G267500 [mitochondrial inner membrane] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_001G268200 R-GRA-5632129 B456_001G268200 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_001G268500 R-GRA-1122785-3 B456_001G268500 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_001G268500 R-GRA-1126726-3 B456_001G268500 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_001G268500 R-GRA-1122785-3 B456_001G268500 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_001G268500 R-GRA-1126726-3 B456_001G268500 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_001G268500 R-GRA-1122785-3 B456_001G268500 [cytosol] R-GRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119570 Cytosolic glycolysis none Gossypium raimondii B456_001G269600 R-GRA-1124905 B456_001G269600 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_001G270100 R-GRA-1124138-2 B456_001G270100 [cytosol] R-GRA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119394 Pantothenate and coenzyme A biosynthesis III none Gossypium raimondii B456_001G270800 R-GRA-9612406 B456_001G270800 [mitochondrial matrix] R-GRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119612 Cysteine degradation none Gossypium raimondii B456_001G273700 R-GRA-5608218 B456_001G273700 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_001G273700 R-GRA-5608218 B456_001G273700 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_001G273700 R-GRA-9658968 B456_001G273700 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_001G275700 R-GRA-1126714-2 B456_001G275700 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_001G275700 R-GRA-1126714-2 B456_001G275700 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_001G275700 R-GRA-1126714-2 B456_001G275700 [cytosol] R-GRA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119295 Homoserine biosynthesis none Gossypium raimondii B456_001G275700 R-GRA-5606484-2 B456_001G275700 [plastid stroma] R-GRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119419 Lysine biosynthesis VI none Gossypium raimondii B456_001G276400 R-GRA-1127873-2 B456_001G276400 [plastid stroma] R-GRA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119424 Plastid glycolysis none Gossypium raimondii B456_001G276400 R-GRA-1127873-2 B456_001G276400 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_002G004400 R-GRA-1128707 B456_002G004400 [cytosol] R-GRA-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Gossypium raimondii B456_002G004400 R-GRA-1128707 B456_002G004400 [cytosol] R-GRA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119370 Sterol biosynthesis none Gossypium raimondii B456_002G004400 R-GRA-1128707 B456_002G004400 [cytosol] R-GRA-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119439 Cholesterol biosynthesis III (via desmosterol) none Gossypium raimondii B456_002G004400 R-GRA-1128707 B456_002G004400 [cytosol] R-GRA-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119559 Cholesterol biosynthesis I none Gossypium raimondii B456_002G004700 R-GRA-9826692-4 B456_002G004700 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_002G005200 R-GRA-1125417-2 B456_002G005200 [cytosol] R-GRA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119265 Tetrahydrofolate biosynthesis I none Gossypium raimondii B456_002G005200 R-GRA-1125417-2 B456_002G005200 [cytosol] R-GRA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119523 Tetrahydrofolate biosynthesis II none Gossypium raimondii B456_002G006900 R-GRA-4415007-5 B456_002G006900 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_002G006900 R-GRA-4415016-5 phospho-B456_002G006900 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_002G006900 R-GRA-4415007-5 B456_002G006900 [cytosol] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_002G010900 R-GRA-9639111 B456_002G010900 [plasma membrane] R-GRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639136 Response to Aluminum stress none Gossypium raimondii B456_002G014700 R-GRA-1124496-5 B456_002G014700 [cytosol] R-GRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119615 Mevalonate pathway none Gossypium raimondii B456_002G014800 R-GRA-6787113-2 B456_002G014800 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_002G015000 R-GRA-5632121-2 B456_002G015000 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_002G016900 R-GRA-1130189 B456_002G016900 [cytosol] R-GRA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Gossypium raimondii B456_002G016900 R-GRA-1130189 B456_002G016900 [cytosol] R-GRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119438 Secologanin and strictosidine biosynthesis none Gossypium raimondii B456_002G016900 R-GRA-1130189 B456_002G016900 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_002G028600 R-GRA-1129390 B456_002G028600 [mitochondrion] R-GRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119506 tyrosine degradation I none Gossypium raimondii B456_002G029700 R-GRA-6787241 B456_002G029700 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_002G030900 R-GRA-1129507 B456_002G030900 [cytosol] R-GRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119452 Galactose degradation II none Gossypium raimondii B456_002G037900 R-GRA-8987473-3 B456_002G037900 [peroxisomal matrix] R-GRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119312 Photorespiration none Gossypium raimondii B456_002G037900 R-GRA-1124984-3 B456_002G037900 [cytosol] R-GRA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119596 Glutamate biosynthesis I none Gossypium raimondii B456_002G038000 R-GRA-8987473 B456_002G038000 [peroxisomal matrix] R-GRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119312 Photorespiration none Gossypium raimondii B456_002G038000 R-GRA-1124984-2 B456_002G038000 [cytosol] R-GRA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119596 Glutamate biosynthesis I none Gossypium raimondii B456_002G038100 R-GRA-5221144-4 B456_002G038100 [plastid] R-GRA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119374 Abscisic acid biosynthesis none Gossypium raimondii B456_002G038200 R-GRA-1123575-2 B456_002G038200 [cytosol] R-GRA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119297 Beta-alanine biosynthesis III none Gossypium raimondii B456_002G043000 R-GRA-1123046 B456_002G043000 [cytosol] R-GRA-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119386 UDP-N-acetylgalactosamine biosynthesis none Gossypium raimondii B456_002G043100 R-GRA-9612372-2 B456_002G043100 [mitochondrial matrix] R-GRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119612 Cysteine degradation none Gossypium raimondii B456_002G045300 R-GRA-9930197-3 MPK8 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_002G046400 R-GRA-1126560 B456_002G046400 [cytosol] R-GRA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119516 Trehalose biosynthesis I none Gossypium raimondii B456_002G051000 R-GRA-9675827 B456_002G051000 [nucleoplasm] R-GRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675782 Maturation none Gossypium raimondii B456_002G051000 R-GRA-9675827 B456_002G051000 [nucleoplasm] R-GRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675815 Leading strand synthesis none Gossypium raimondii B456_002G051000 R-GRA-9675827 B456_002G051000 [nucleoplasm] R-GRA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675885 Lagging strand synthesis none Gossypium raimondii B456_002G051200 R-GRA-1123733 B456_002G051200 [cytosol] R-GRA-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119484 Folate polyglutamylation II none Gossypium raimondii B456_002G051600 R-GRA-1123733-2 B456_002G051600 [cytosol] R-GRA-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119484 Folate polyglutamylation II none Gossypium raimondii B456_002G052400 R-GRA-5632315 B456_002G052400 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_002G052400 R-GRA-5632284 phospho-B456_002G052400 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_002G052400 R-GRA-5632342 phospho-B456_002G052400 [cytosol] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_002G052400 R-GRA-5632315 B456_002G052400 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_002G058000 R-GRA-8987467-2 B456_002G058000 [chloroplast] R-GRA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119502 Allantoin degradation none Gossypium raimondii B456_002G061600 R-GRA-1129438-5 B456_002G061600 [cytosol] R-GRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119438 Secologanin and strictosidine biosynthesis none Gossypium raimondii B456_002G063300 R-GRA-1128071 B456_002G063300 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_002G063900 R-GRA-1129438-7 B456_002G063900 [cytosol] R-GRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119438 Secologanin and strictosidine biosynthesis none Gossypium raimondii B456_002G065000 R-GRA-1127734 B456_002G065000 [cytosol] R-GRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119506 tyrosine degradation I none Gossypium raimondii B456_002G067900 R-GRA-9638996 B456_002G067900 [cytosol] R-GRA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119434 Phytic acid biosynthesis (lipid-independent) none Gossypium raimondii B456_002G068300 R-GRA-9035727-3 B456_002G068300 [cytosol] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_002G068300 R-GRA-9035692-3 B456_002G068300 [nucleoplasm] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_002G079800 R-GRA-4752547-2 B456_002G079800 [plastid stroma] R-GRA-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119498 Phylloquinone biosynthesis none Gossypium raimondii B456_002G082800 R-GRA-1128069-3 B456_002G082800 [cytosol] R-GRA-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Gossypium raimondii B456_002G082800 R-GRA-1128069-3 B456_002G082800 [cytosol] R-GRA-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Gossypium raimondii B456_002G085200 R-GRA-9918175-2 B456_002G085200 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_002G090700 R-GRA-9025513-2 B456_002G090700 [endoplasmic reticulum membrane] R-GRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119325 Sphingolipid metabolism none Gossypium raimondii B456_002G090700 R-GRA-1129700-2 B456_002G090700 [cytosol] R-GRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119610 Biotin biosynthesis II none Gossypium raimondii B456_002G093700 R-GRA-1123745 B456_002G093700 [endoplasmic reticulum membrane] R-GRA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119260 Cardiolipin biosynthesis none Gossypium raimondii B456_002G093700 R-GRA-1123745 B456_002G093700 [endoplasmic reticulum membrane] R-GRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119402 Phospholipid biosynthesis I none Gossypium raimondii B456_002G098400 R-GRA-1127723 B456_002G098400 [cytosol] R-GRA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119331 Cysteine biosynthesis I none Gossypium raimondii B456_002G102700 R-GRA-1130006-2 B456_002G102700 [plastid stroma] R-GRA-1119569 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119569 Kievitone biosynthesis none Gossypium raimondii B456_002G107200 R-GRA-5149657 B456_002G107200 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_002G107200 R-GRA-1129239 B456_002G107200 [cytosol] R-GRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119570 Cytosolic glycolysis none Gossypium raimondii B456_002G107300 R-GRA-5149643 B456_002G107300 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_002G108700 R-GRA-1125920 B456_002G108700 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_002G108700 R-GRA-1125920 B456_002G108700 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_002G110500 R-GRA-1129846 B456_002G110500 [mitochondrion] R-GRA-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119337 Proline degradation none Gossypium raimondii B456_002G110500 R-GRA-1129846 B456_002G110500 [mitochondrion] R-GRA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119458 Glutamate degradation none Gossypium raimondii B456_002G110600 R-GRA-1124949 B456_002G110600 [plastid stroma] R-GRA-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119308 Momilactone biosynthesis none Gossypium raimondii B456_002G110600 R-GRA-1124949 B456_002G110600 [plastid stroma] R-GRA-1119328 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119328 Oleoresin sesquiterpene volatiles biosynthesis none Gossypium raimondii B456_002G110600 R-GRA-1129421 B456_002G110600 [chloroplast] R-GRA-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119348 Ent-kaurene biosynthesis none Gossypium raimondii B456_002G110600 R-GRA-1124949 B456_002G110600 [plastid stroma] R-GRA-1119371 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119371 Oryzalexin A-F biosynthesis none Gossypium raimondii B456_002G110600 R-GRA-1124949 B456_002G110600 [plastid stroma] R-GRA-1119521 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119521 Oryzalexin S biosynthesis none Gossypium raimondii B456_002G110600 R-GRA-1129220 B456_002G110600 [cytosol] R-GRA-1119583 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119583 Phytocassane biosynthesis none Gossypium raimondii B456_002G110600 R-GRA-9610718 B456_002G110600 [plastid stroma] R-GRA-9610720 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9610720 Oryzalide A biosynthesis none Gossypium raimondii B456_002G114000 R-GRA-1126728 B456_002G114000 [plastid stroma] R-GRA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119424 Plastid glycolysis none Gossypium raimondii B456_002G120800 R-GRA-1129187-3 B456_002G120800 [cytosol] R-GRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119276 Choline biosynthesis III none Gossypium raimondii B456_002G124400 R-GRA-5608137 B456_002G124400 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_002G125900 R-GRA-8868961-3 B456_002G125900 [plant-type vacuole membrane] R-GRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8868949 Intracellular auxin transport none Gossypium raimondii B456_002G127000 R-GRA-1123717 B456_002G127000 [cytosol] R-GRA-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119395 Maackiain biosynthesis none Gossypium raimondii B456_002G127000 R-GRA-1123717 B456_002G127000 [cytosol] R-GRA-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119453 Medicarpin biosynthesis none Gossypium raimondii B456_002G128400 R-GRA-1124742 B456_002G128400 [cytosol] R-GRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119410 Ascorbate biosynthesis none Gossypium raimondii B456_002G128400 R-GRA-1124742 B456_002G128400 [cytosol] R-GRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119570 Cytosolic glycolysis none Gossypium raimondii B456_002G132900 R-GRA-1123819-4 B456_002G132900 [plastid stroma] R-GRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119464 Methylerythritol phosphate pathway none Gossypium raimondii B456_002G133500 R-GRA-9640671-2 B456_002G133500 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_002G133500 R-GRA-9640671-2 B456_002G133500 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_002G133800 R-GRA-8986682-3 B456_002G133800 [extracellular region] R-GRA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8986768 Anther and pollen development none Gossypium raimondii B456_002G134600 R-GRA-8879009-6 B456_002G134600 [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_002G135200 R-GRA-9826683-3 HSFB4A [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_002G136900 R-GRA-1123895-5 B456_002G136900 [cytosol] R-GRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119334 Ethylene biosynthesis from methionine none Gossypium raimondii B456_002G136900 R-GRA-1123895-5 B456_002G136900 [cytosol] R-GRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119624 Methionine salvage pathway none Gossypium raimondii B456_002G137600 R-GRA-5654942 B456_002G137600 [Golgi lumen] R-GRA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654909 Xylan biosynthesis none Gossypium raimondii B456_002G142800 R-GRA-5632120-2 B456_002G142800 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_002G146000 R-GRA-1124496-6 B456_002G146000 [cytosol] R-GRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119615 Mevalonate pathway none Gossypium raimondii B456_002G147800 R-GRA-2885386 B456_002G147800 [cytosol] R-GRA-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119417 Stachyose biosynthesis none Gossypium raimondii B456_002G148000 R-GRA-9675280-2 B456_002G148000 [nucleoplasm] R-GRA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030680 Crown root development none Gossypium raimondii B456_002G149300 R-GRA-1123832-2 B456_002G149300 [cytosol] R-GRA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119304 Putrescine biosynthesis II none Gossypium raimondii B456_002G149300 R-GRA-1123832-2 B456_002G149300 [cytosol] R-GRA-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119447 Putrescine biosynthesis I none Gossypium raimondii B456_002G153400 R-GRA-1127625 B456_002G153400 [cytosol] R-GRA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119265 Tetrahydrofolate biosynthesis I none Gossypium raimondii B456_002G153400 R-GRA-1127625 B456_002G153400 [cytosol] R-GRA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119523 Tetrahydrofolate biosynthesis II none Gossypium raimondii B456_002G154600 R-GRA-1126892 B456_002G154600 [cytosol] R-GRA-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119353 Linear furanocoumarin biosynthesis none Gossypium raimondii B456_002G156500 R-GRA-1124598-5 B456_002G156500 [cytosol] R-GRA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119300 Glycolipid desaturation none Gossypium raimondii B456_002G156600 R-GRA-1124598-3 B456_002G156600 [cytosol] R-GRA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119300 Glycolipid desaturation none Gossypium raimondii B456_002G156700 R-GRA-9030976-3 B456_002G156700 [nucleoplasm] R-GRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654828 Strigolactone signaling none Gossypium raimondii B456_002G156700 R-GRA-9030976-3 B456_002G156700 [nucleoplasm] R-GRA-9030908 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030908 Underwater shoot and internode elongation none Gossypium raimondii B456_002G156700 R-GRA-9030976-3 B456_002G156700 [nucleoplasm] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_002G156700 R-GRA-9035631-3 B456_002G156700 [cytosol] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_002G156700 R-GRA-9030976-3 B456_002G156700 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_002G156700 R-GRA-9035631-3 B456_002G156700 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_002G156700 R-GRA-9608743-3 B456_002G156700 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_002G156700 R-GRA-9608705-3 B456_002G156700 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_002G157200 R-GRA-9640739-5 B456_002G157200 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_002G158300 R-GRA-2960790 B456_002G158300 [cytosol] R-GRA-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119386 UDP-N-acetylgalactosamine biosynthesis none Gossypium raimondii B456_002G158300 R-GRA-2960790 B456_002G158300 [cytosol] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_002G163200 R-GRA-9916305-3 B456_002G163200 [nucleoplasm] R-GRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9916190 Root angle formation: elongation and curvature response none Gossypium raimondii B456_002G169100 R-GRA-5679402-4 B456_002G169100 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_002G171100 R-GRA-5679470 B456_002G171100 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_002G176200 R-GRA-1128632 B456_002G176200 [cytosol] R-GRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119465 Sucrose biosynthesis none Gossypium raimondii B456_002G176200 R-GRA-1128632 B456_002G176200 [cytosol] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_002G177000 R-GRA-5679455 B456_002G177000 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_002G177000 R-GRA-6787020 B456_002G177000 [cytosol] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_002G177300 R-GRA-9918159 B456_002G177300 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_002G179000 R-GRA-1128126 B456_002G179000 [endosome] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_002G179000 R-GRA-5679348 B456_002G179000 [plasma membrane] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_002G179900 R-GRA-1123525 B456_002G179900 [cytosol] R-GRA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119384 NAD biosynthesis I (from aspartate) none Gossypium raimondii B456_002G181100 R-GRA-1126320-2 B456_002G181100 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_002G181300 R-GRA-1130231 B456_002G181300 [endoplasmic reticulum membrane] R-GRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119325 Sphingolipid metabolism none Gossypium raimondii B456_002G191800 R-GRA-9675500 B456_002G191800 [endoplasmic reticulum membrane] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_002G192900 R-GRA-1128877 B456_002G192900 [plastid stroma] R-GRA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119424 Plastid glycolysis none Gossypium raimondii B456_002G192900 R-GRA-1128877 B456_002G192900 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_002G196300 R-GRA-1123596-4 B456_002G196300 [plastid stroma] R-GRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119509 Histidine biosynthesis I none Gossypium raimondii B456_002G196800 R-GRA-1123786 B456_002G196800 R-GRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119403 Removal of superoxide radicals none Gossypium raimondii B456_002G197400 R-GRA-9645954 B456_002G197400 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_002G197500 R-GRA-5679324 B456_002G197500 [cytosol] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_002G198600 R-GRA-8987448 B456_002G198600 [peroxisomal matrix] R-GRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119312 Photorespiration none Gossypium raimondii B456_002G205100 R-GRA-5632232 phospho-B456_002G205100 [plasma membrane] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_002G207000 R-GRA-9928771 B456_002G207000 [nucleoplasm] R-GRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928831 Severe drought none Gossypium raimondii B456_002G212000 R-GRA-1122974-3 B456_002G212000 [mitochondrial matrix] R-GRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119479 Valine degradation none Gossypium raimondii B456_002G212600 R-GRA-1122974 B456_002G212600 [mitochondrial matrix] R-GRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119479 Valine degradation none Gossypium raimondii B456_002G218400 R-GRA-9826604-3 B456_002G218400 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_002G220700 R-GRA-1130304-3 B456_002G220700 [cytosol] R-GRA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119291 Nitrate assimilation none Gossypium raimondii B456_002G222900 R-GRA-1122242-8 B456_002G222900 [cytosol] R-GRA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119267 Phenylalanine degradation III none Gossypium raimondii B456_002G226600 R-GRA-5603891 B456_002G226600 [plastid stroma] R-GRA-1119420 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119420 Glutamate biosynthesis V none Gossypium raimondii B456_002G226600 R-GRA-1125410 B456_002G226600 [chloroplast stroma] R-GRA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119443 Ammonia assimilation cycle none Gossypium raimondii B456_002G228000 R-GRA-1122326 B456_002G228000 [cytosol] R-GRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119438 Secologanin and strictosidine biosynthesis none Gossypium raimondii B456_002G230000 R-GRA-1130036 B456_002G230000 [endoplasmic reticulum membrane] R-GRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119402 Phospholipid biosynthesis I none Gossypium raimondii B456_002G230300 R-GRA-9639088-4 B456_002G230300 [plasma membrane] R-GRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639136 Response to Aluminum stress none Gossypium raimondii B456_002G230900 R-GRA-1126996 B456_002G230900 [cytosol] R-GRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119316 Phenylpropanoid biosynthesis none Gossypium raimondii B456_002G231300 R-GRA-8854121 B456_002G231300 [cytosol] R-GRA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119556 Choline biosynthesis I none Gossypium raimondii B456_002G236100 R-GRA-9608693-3 B456_002G236100 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_002G240500 R-GRA-9930216-4 ABI5 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_002G241400 R-GRA-1124067-2 B456_002G241400 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_002G241400 R-GRA-9626520-2 B456_002G241400 [plastid stroma] R-GRA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9626305 Regulatory network of nutrient accumulation none Gossypium raimondii B456_002G242100 R-GRA-5149646 B456_002G242100 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_002G242100 R-GRA-1126652 B456_002G242100 [cytosol] R-GRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119570 Cytosolic glycolysis none Gossypium raimondii B456_002G242700 R-GRA-1127922 B456_002G242700 [cytosol] R-GRA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119370 Sterol biosynthesis none Gossypium raimondii B456_002G244600 R-GRA-5655007-2 B456_002G244600 [Golgi lumen] R-GRA-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5655010 Xylogalacturonan biosynthesis none Gossypium raimondii B456_002G244900 R-GRA-1122936-2 B456_002G244900 [cytosol] R-GRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119452 Galactose degradation II none Gossypium raimondii B456_002G246000 R-GRA-1130210 B456_002G246000 [cytosol] R-GRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119586 Cyanate degradation none Gossypium raimondii B456_002G246100 R-GRA-1130210-3 B456_002G246100 [cytosol] R-GRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119586 Cyanate degradation none Gossypium raimondii B456_002G247000 R-GRA-9640698-2 B456_002G247000 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_002G248000 R-GRA-1130235-4 B456_002G248000 [cytosol] R-GRA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119261 Salicylate biosynthesis none Gossypium raimondii B456_002G248000 R-GRA-1130235-4 B456_002G248000 [cytosol] R-GRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119418 Suberin biosynthesis none Gossypium raimondii B456_002G248000 R-GRA-1130235-4 B456_002G248000 [cytosol] R-GRA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119582 Phenylpropanoid biosynthesis, initial reactions none Gossypium raimondii B456_002G2484001 R-GRA-9618056-8 B456_002G2484001 [plasma membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_002G2484002 R-GRA-9618056-6 B456_002G2484002 [plasma membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_002G251500 R-GRA-9608682-3 B456_002G251500 [nucleoplasm] R-GRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934036 Long day regulated expression of florigens none Gossypium raimondii B456_002G251500 R-GRA-9608682-3 B456_002G251500 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_002G251500 R-GRA-9608606-3 B456_002G251500 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_002G256200 R-GRA-1127913 B456_002G256200 [cytosol] R-GRA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119495 Citrulline biosynthesis none Gossypium raimondii B456_002G256200 R-GRA-1127913 B456_002G256200 [cytosol] R-GRA-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119631 Proline biosynthesis I none Gossypium raimondii B456_002G260500 R-GRA-9681885-2 B456_002G260500 [Golgi membrane] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_002G262800 R-GRA-1129616-2 B456_002G262800 [cytosol] R-GRA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119300 Glycolipid desaturation none Gossypium raimondii B456_002G267900 R-GRA-1124791 B456_002G267900 [cytosol] R-GRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119610 Biotin biosynthesis II none Gossypium raimondii B456_003G000900 R-GRA-8868866-3 B456_003G000900 [endoplasmic reticulum membrane] R-GRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8868949 Intracellular auxin transport none Gossypium raimondii B456_003G001200 R-GRA-8868994-2 B456_003G001200 [endoplasmic reticulum membrane] R-GRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8868949 Intracellular auxin transport none Gossypium raimondii B456_003G003100 R-GRA-1128641 B456_003G003100 [cytosol] R-GRA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119331 Cysteine biosynthesis I none Gossypium raimondii B456_003G003400 R-GRA-1127087-2 B456_003G003400 [cytosol] R-GRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119438 Secologanin and strictosidine biosynthesis none Gossypium raimondii B456_003G003500 R-GRA-1127087 B456_003G003500 [cytosol] R-GRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119438 Secologanin and strictosidine biosynthesis none Gossypium raimondii B456_003G005500 R-GRA-1129187 B456_003G005500 [cytosol] R-GRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119276 Choline biosynthesis III none Gossypium raimondii B456_003G006000 R-GRA-1130136-2 B456_003G006000 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_003G006000 R-GRA-1130136-2 B456_003G006000 [mitochondrial matrix] R-GRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119540 Leucine biosynthesis none Gossypium raimondii B456_003G010800 R-GRA-1125093-3 B456_003G010800 [cytosol] R-GRA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119456 Brassinosteroid biosynthesis II none Gossypium raimondii B456_003G011600 R-GRA-9658643-2 B456_003G011600 [cytosol] R-GRA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119567 Beta-alanine biosynthesis I none Gossypium raimondii B456_003G013000 R-GRA-9639957 B456_003G013000 [plasma membrane] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_003G015500 R-GRA-1129247-2 B456_003G015500 [mitochondrial inner membrane] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_003G016600 R-GRA-9826620 HOX12/ OsGT1 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_003G016600 R-GRA-9826620 HOX12/ OsGT1 [nucleoplasm] R-GRA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Gossypium raimondii B456_003G026100 R-GRA-8879009 B456_003G026100 [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_003G027100 R-GRA-9640671-5 B456_003G027100 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_003G027100 R-GRA-9640671-5 B456_003G027100 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_003G027900 R-GRA-1123819-3 B456_003G027900 [plastid stroma] R-GRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119464 Methylerythritol phosphate pathway none Gossypium raimondii B456_003G029200 R-GRA-8933816-2 B456_003G029200 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_003G029300 R-GRA-8933816 B456_003G029300 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_003G030900 R-GRA-9658611-3 B456_003G030900 [plastid stroma] R-GRA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119263 Arginine biosynthesis none Gossypium raimondii B456_003G030900 R-GRA-9658611-3 B456_003G030900 [plastid stroma] R-GRA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119539 Ornithine biosynthesis none Gossypium raimondii B456_003G030900 R-GRA-9658611-3 B456_003G030900 [plastid stroma] R-GRA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119622 Arginine biosynthesis II (acetyl cycle) none Gossypium raimondii B456_003G031400 R-GRA-5655075-2 B456_003G031400 [Golgi lumen] R-GRA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5655101 Xyloglucan biosynthesis none Gossypium raimondii B456_003G032300 R-GRA-9035593-2 B456_003G032300 [cytosol] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_003G032300 R-GRA-9035634-2 B456_003G032300 [nucleoplasm] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_003G032300 R-GRA-9035593-2 B456_003G032300 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_003G032300 R-GRA-9035634-2 B456_003G032300 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_003G033000 R-GRA-1123895-3 B456_003G033000 [cytosol] R-GRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119334 Ethylene biosynthesis from methionine none Gossypium raimondii B456_003G033000 R-GRA-1123895-3 B456_003G033000 [cytosol] R-GRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119624 Methionine salvage pathway none Gossypium raimondii B456_003G041800 R-GRA-9826680-2 B456_003G041800 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_003G044700 R-GRA-1129964-2 B456_003G044700 [cytosol] R-GRA-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119378 Myo-inositol biosynthesis none Gossypium raimondii B456_003G044700 R-GRA-1129964-2 B456_003G044700 [cytosol] R-GRA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119434 Phytic acid biosynthesis (lipid-independent) none Gossypium raimondii B456_003G046600 R-GRA-8934251 B456_003G046600 [nucleoplasm] R-GRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934036 Long day regulated expression of florigens none Gossypium raimondii B456_003G046600 R-GRA-8934251 B456_003G046600 [nucleoplasm] R-GRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934108 Short day regulated expression of florigens none Gossypium raimondii B456_003G048000 R-GRA-1129466 B456_003G048000 [cytosol] R-GRA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119449 Carotenoid biosynthesis none Gossypium raimondii B456_003G052100 R-GRA-1129650 B456_003G052100 [cytosol] R-GRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119418 Suberin biosynthesis none Gossypium raimondii B456_003G054300 R-GRA-9638999 B456_003G054300 [cytosol] R-GRA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119434 Phytic acid biosynthesis (lipid-independent) none Gossypium raimondii B456_003G057500 R-GRA-8879040 B456_003G057500 [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_003G057700 R-GRA-9035614 B456_003G057700 [cytosol] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_003G057700 R-GRA-9035651 B456_003G057700 [nucleoplasm] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_003G057900 R-GRA-9640716 B456_003G057900 [nucleoplasm] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_003G057900 R-GRA-9640716 B456_003G057900 [nucleoplasm] R-GRA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640882 Assembly of pre-replication complex none Gossypium raimondii B456_003G057900 R-GRA-9640716 B456_003G057900 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_003G058100 R-GRA-3321260-2 B456_003G058100 [chloroplast stroma] R-GRA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119287 Vitamin E biosynthesis none Gossypium raimondii B456_003G059700 R-GRA-1124786 B456_003G059700 [cytosol] R-GRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119276 Choline biosynthesis III none Gossypium raimondii B456_003G060900 R-GRA-9920284 B456_003G060900 [nucleoplasm] R-GRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934108 Short day regulated expression of florigens none Gossypium raimondii B456_003G061400 R-GRA-8987477 B456_003G061400 [peroxisomal matrix] R-GRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119312 Photorespiration none Gossypium raimondii B456_003G061400 R-GRA-1128688 B456_003G061400 [cytosol] R-GRA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119596 Glutamate biosynthesis I none Gossypium raimondii B456_003G066300 R-GRA-1129924 B456_003G066300 [cytosol] R-GRA-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119342 Gamma-glutamyl cycle none Gossypium raimondii B456_003G066300 R-GRA-1129924 B456_003G066300 [cytosol] R-GRA-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119483 Glutathione biosynthesis none Gossypium raimondii B456_003G069700 R-GRA-5633270 B456_003G069700 [cytosol] R-GRA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119495 Citrulline biosynthesis none Gossypium raimondii B456_003G075200 R-GRA-1124788 B456_003G075200 [cytosol] R-GRA-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119601 Trehalose degradation II none Gossypium raimondii B456_003G076700 R-GRA-9025699 B456_003G076700 [plasma membrane] R-GRA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8858053 Polar auxin transport none Gossypium raimondii B456_003G076700 R-GRA-9025699 B456_003G076700 [plasma membrane] R-GRA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9025727 Iron uptake and transport in root vascular system none Gossypium raimondii B456_003G078000 R-GRA-9675365-2 B456_003G078000 [nucleoplasm] R-GRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675508 Root elongation none Gossypium raimondii B456_003G078800 R-GRA-1122936-3 B456_003G078800 [cytosol] R-GRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119452 Galactose degradation II none Gossypium raimondii B456_003G085100 R-GRA-9607105-2 B456_003G085100 [mitochondrion] R-GRA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9607185 Generation of superoxide radicals none Gossypium raimondii B456_003G085800 R-GRA-1129922 B456_003G085800 [plastid stroma] R-GRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119464 Methylerythritol phosphate pathway none Gossypium raimondii B456_003G087300 R-GRA-9675280 B456_003G087300 [nucleoplasm] R-GRA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030680 Crown root development none Gossypium raimondii B456_003G091700 R-GRA-6787864 B456_003G091700 [nucleoplasm] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_003G092600 R-GRA-1123087 B456_003G092600 [plasma membrane] R-GRA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119314 Cellulose biosynthesis none Gossypium raimondii B456_003G095000 R-GRA-1124037 B456_003G095000 [mitochondrial matrix] R-GRA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119289 Arginine degradation none Gossypium raimondii B456_003G097600 R-GRA-1122261 B456_003G097600 [plastid stroma] R-GRA-1119602 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119602 Phytyl-PP biosynthesis none Gossypium raimondii B456_003G097600 R-GRA-1122261 B456_003G097600 [plastid stroma] R-GRA-1119605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119605 Chlorophyll a biosynthesis II none Gossypium raimondii B456_003G098300 R-GRA-8933833 B456_003G098300 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_003G098300 R-GRA-8933833 B456_003G098300 [nucleoplasm] R-GRA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928995 Drought escape (DE) via ABA-dependent pathway none Gossypium raimondii B456_003G098400 R-GRA-5655070-2 B456_003G098400 [Golgi lumen] R-GRA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5655101 Xyloglucan biosynthesis none Gossypium raimondii B456_003G0997002 R-GRA-8879009-3 B456_003G0997002 [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_003G101500 R-GRA-9645944 B456_003G101500 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_003G104600 R-GRA-8934168 B456_003G104600 [nucleoplasm] R-GRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934036 Long day regulated expression of florigens none Gossypium raimondii B456_003G104600 R-GRA-8934168 B456_003G104600 [nucleoplasm] R-GRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934108 Short day regulated expression of florigens none Gossypium raimondii B456_003G104600 R-GRA-9920270 B456_003G104600 [nucleoplasm] R-GRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934108 Short day regulated expression of florigens none Gossypium raimondii B456_003G104600 R-GRA-8934168 B456_003G104600 [nucleoplasm] R-GRA-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928946 Drought escape (DE) via ABA-independent pathway none Gossypium raimondii B456_003G106500 R-GRA-1123575-4 B456_003G106500 [cytosol] R-GRA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119297 Beta-alanine biosynthesis III none Gossypium raimondii B456_003G107200 R-GRA-1126395-7 B456_003G107200 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_003G108500 R-GRA-1129029 B456_003G108500 [cytosol] R-GRA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119501 S-adenosyl-L-methionine cycle none Gossypium raimondii B456_003G110100 R-GRA-6787185 B456_003G110100 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_003G112000 R-GRA-9608930-2 B456_003G112000 [nucleoplasm] R-GRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934036 Long day regulated expression of florigens none Gossypium raimondii B456_003G113900 R-GRA-1125569 B456_003G113900 [cytosol] R-GRA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119516 Trehalose biosynthesis I none Gossypium raimondii B456_003G114000 R-GRA-1126888-5 B456_003G114000 [cytosol] R-GRA-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119360 Fructan biosynthesis none Gossypium raimondii B456_003G119100 R-GRA-4827081-2 B456_003G119100 [plastid stroma] R-GRA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-4827054 Tetrapyrrole biosynthesis I none Gossypium raimondii B456_003G122700 R-GRA-9025699-3 B456_003G122700 [plasma membrane] R-GRA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8858053 Polar auxin transport none Gossypium raimondii B456_003G122700 R-GRA-9025699-3 B456_003G122700 [plasma membrane] R-GRA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9025727 Iron uptake and transport in root vascular system none Gossypium raimondii B456_003G123500 R-GRA-9640886 B456_003G123500 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_003G128800 R-GRA-1127539 B456_003G128800 [cytosol] R-GRA-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Gossypium raimondii B456_003G128800 R-GRA-1127539 B456_003G128800 [cytosol] R-GRA-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119439 Cholesterol biosynthesis III (via desmosterol) none Gossypium raimondii B456_003G128800 R-GRA-1127539 B456_003G128800 [cytosol] R-GRA-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119559 Cholesterol biosynthesis I none Gossypium raimondii B456_003G128900 R-GRA-4415078 B456_003G128900 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_003G131500 R-GRA-5149632-2 B456_003G131500 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_003G131600 R-GRA-9611477-2 phospho-phosphorylated-RLCK176 [cytosol] R-GRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Gossypium raimondii B456_003G133100 R-GRA-9611544-3 SPL11 [nucleoplasm] R-GRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Gossypium raimondii B456_003G133100 R-GRA-9611440-3 phospho-phosphorylated-SPL11 [nucleoplasm] R-GRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Gossypium raimondii B456_003G136400 R-GRA-9826691-3 B456_003G136400 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_003G136900 R-GRA-1126172 B456_003G136900 [cytosol] R-GRA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119379 Flavin biosynthesis none Gossypium raimondii B456_003G139900 R-GRA-9675423-2 B456_003G139900 [nucleoplasm] R-GRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675508 Root elongation none Gossypium raimondii B456_003G139900 R-GRA-9930290-2 MPK5 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_003G140000 R-GRA-1126387 B456_003G140000 [cytosol] R-GRA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119295 Homoserine biosynthesis none Gossypium raimondii B456_003G141600 R-GRA-9618056-2 B456_003G141600 [plasma membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_003G142500 R-GRA-5608161-3 B456_003G142500 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_003G146000 R-GRA-9675845 B456_003G146000 [nucleoplasm] R-GRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675782 Maturation none Gossypium raimondii B456_003G146200 R-GRA-9826654 B456_003G146200 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_003G150700 R-GRA-6786908 B456_003G150700 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_003G150700 R-GRA-9826697 B456_003G150700 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_003G151800 R-GRA-9675399-3 B456_003G151800 [nucleoplasm] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_003G153700 R-GRA-8987460 B456_003G153700 [chloroplast] R-GRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119312 Photorespiration none Gossypium raimondii B456_003G155700 R-GRA-6788007-2 B456_003G155700 [cytosol] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_003G158300 R-GRA-1122593 B456_003G158300 [cytosol] R-GRA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119436 Peptidoglycan biosynthesis I none Gossypium raimondii B456_003G158300 R-GRA-1122593 B456_003G158300 [cytosol] R-GRA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119523 Tetrahydrofolate biosynthesis II none Gossypium raimondii B456_003G158300 R-GRA-1122593 B456_003G158300 [cytosol] R-GRA-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119617 Folate polyglutamylation I none Gossypium raimondii B456_003G161100 R-GRA-9675851 B456_003G161100 [nucleoplasm] R-GRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675815 Leading strand synthesis none Gossypium raimondii B456_003G162400 R-GRA-5632261-2 B456_003G162400 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_003G162600 R-GRA-9826696-2 B456_003G162600 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_003G162700 R-GRA-8879029-3 DREB1G [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_003G162700 R-GRA-8879085-3 B456_003G162700 [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_003G162700 R-GRA-8879050-2 CBF1 homolog [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_003G163200 R-GRA-1128328-2 B456_003G163200 [cytosol] R-GRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119615 Mevalonate pathway none Gossypium raimondii B456_003G172200 R-GRA-1127338 B456_003G172200 [mitochondrial inner membrane] R-GRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119402 Phospholipid biosynthesis I none Gossypium raimondii B456_003G176300 R-GRA-9608930-3 B456_003G176300 [nucleoplasm] R-GRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934036 Long day regulated expression of florigens none Gossypium raimondii B456_003G178900 R-GRA-8933728-5 B456_003G178900 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_003G179400 R-GRA-1130181 B456_003G179400 [plastid stroma] R-GRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119430 Chorismate biosynthesis none Gossypium raimondii B456_003G180400 R-GRA-8987554 B456_003G180400 [mitochondrial matrix] R-GRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119312 Photorespiration none Gossypium raimondii B456_003G181400 R-GRA-5138481 B456_003G181400 [plastid stroma] R-GRA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119263 Arginine biosynthesis none Gossypium raimondii B456_003G181400 R-GRA-5138481 B456_003G181400 [plastid stroma] R-GRA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119539 Ornithine biosynthesis none Gossypium raimondii B456_003G182100 R-GRA-6787119-2 B456_003G182100 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_003G183200 R-GRA-1127523-2 B456_003G183200 [cytosol] R-GRA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Gossypium raimondii B456_003G185500 R-GRA-1122783-2 B456_003G185500 [chloroplast stroma] R-GRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119402 Phospholipid biosynthesis I none Gossypium raimondii B456_003G186600 R-GRA-5149678-2 B456_003G186600 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_004G001200 R-GRA-9025294-4 B456_004G001200 [cytosol] R-GRA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119267 Phenylalanine degradation III none Gossypium raimondii B456_004G001200 R-GRA-1124944-4 B456_004G001200 [plastid stroma] R-GRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119460 Isoleucine biosynthesis from threonine none Gossypium raimondii B456_004G001200 R-GRA-1127774-4 B456_004G001200 [cytosol] R-GRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119460 Isoleucine biosynthesis from threonine none Gossypium raimondii B456_004G001200 R-GRA-1124944-4 B456_004G001200 [plastid stroma] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_004G001200 R-GRA-1127774-4 B456_004G001200 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_004G001200 R-GRA-1124944-4 B456_004G001200 [plastid stroma] R-GRA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119502 Allantoin degradation none Gossypium raimondii B456_004G001200 R-GRA-1124944-4 B456_004G001200 [plastid stroma] R-GRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119600 Valine biosynthesis none Gossypium raimondii B456_004G001200 R-GRA-1127774-4 B456_004G001200 [cytosol] R-GRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119600 Valine biosynthesis none Gossypium raimondii B456_004G001400 R-GRA-9618056-5 B456_004G001400 [plasma membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_004G005000 R-GRA-5149632-3 B456_004G005000 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_004G006600 R-GRA-9681885-7 B456_004G006600 [Golgi membrane] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_004G011600 R-GRA-5632111-3 B456_004G011600 [cytosol] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_004G011600 R-GRA-5632216-3 phospho-B456_004G011600 [cytosol] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_004G014900 R-GRA-1127373-2 B456_004G014900 [cytosol] R-GRA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119297 Beta-alanine biosynthesis III none Gossypium raimondii B456_004G019600 R-GRA-9640675 B456_004G019600 [nucleoplasm] R-GRA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640882 Assembly of pre-replication complex none Gossypium raimondii B456_004G019600 R-GRA-9640675 B456_004G019600 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_004G027600 R-GRA-9920292-2 B456_004G027600 [nucleoplasm] R-GRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934108 Short day regulated expression of florigens none Gossypium raimondii B456_004G031200 R-GRA-9025712-2 B456_004G031200 [cytosol] R-GRA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9025754 Mugineic acid biosynthesis none Gossypium raimondii B456_004G031700 R-GRA-1128606-2 B456_004G031700 [mitochondrial matrix] R-GRA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119365 Lysine degradation II none Gossypium raimondii B456_004G031700 R-GRA-1173244-2 B456_004G031700 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_004G032600 R-GRA-1123745-5 B456_004G032600 [endoplasmic reticulum membrane] R-GRA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119260 Cardiolipin biosynthesis none Gossypium raimondii B456_004G032600 R-GRA-1123745-5 B456_004G032600 [endoplasmic reticulum membrane] R-GRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119402 Phospholipid biosynthesis I none Gossypium raimondii B456_004G037400 R-GRA-9639088 B456_004G037400 [plasma membrane] R-GRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639136 Response to Aluminum stress none Gossypium raimondii B456_004G038500 R-GRA-8933728-4 B456_004G038500 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_004G040600 R-GRA-1126421 B456_004G040600 [cytosol] R-GRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119428 GDP-D-rhamnose biosynthesis none Gossypium raimondii B456_004G040600 R-GRA-1126421 B456_004G040600 [cytosol] R-GRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Gossypium raimondii B456_004G041700 R-GRA-1129411-2 B456_004G041700 [cytosol] R-GRA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119496 Pantothenate biosynthesis I none Gossypium raimondii B456_004G041700 R-GRA-1129411-2 B456_004G041700 [cytosol] R-GRA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119544 Pantothenate biosynthesis II none Gossypium raimondii B456_004G042100 R-GRA-1125834 B456_004G042100 [cytosol] R-GRA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119379 Flavin biosynthesis none Gossypium raimondii B456_004G045300 R-GRA-1130416-2 B456_004G045300 [mitochondrial matrix] R-GRA-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119337 Proline degradation none Gossypium raimondii B456_004G045300 R-GRA-1130416-2 B456_004G045300 [mitochondrial matrix] R-GRA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119495 Citrulline biosynthesis none Gossypium raimondii B456_004G046100 R-GRA-1127526 B456_004G046100 [cytosol] R-GRA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119332 Jasmonic acid biosynthesis none Gossypium raimondii B456_004G046300 R-GRA-1127526-3 B456_004G046300 [cytosol] R-GRA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119332 Jasmonic acid biosynthesis none Gossypium raimondii B456_004G046400 R-GRA-1127526-2 B456_004G046400 [cytosol] R-GRA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119332 Jasmonic acid biosynthesis none Gossypium raimondii B456_004G047100 R-GRA-9612399-2 B456_004G047100 [peroxisomal matrix] R-GRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119612 Cysteine degradation none Gossypium raimondii B456_004G047100 R-GRA-9612380 B456_004G047100 [cytosol] R-GRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119612 Cysteine degradation none Gossypium raimondii B456_004G048300 R-GRA-1126554 B456_004G048300 [cytosol] R-GRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119452 Galactose degradation II none Gossypium raimondii B456_004G051100 R-GRA-5654937 B456_004G051100 [Golgi lumen] R-GRA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654909 Xylan biosynthesis none Gossypium raimondii B456_004G051500 R-GRA-1126830-3 B456_004G051500 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_004G052700 R-GRA-9639810-2 B456_004G052700 [cell wall] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_004G053500 R-GRA-5608164 B456_004G053500 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_004G053500 R-GRA-5608164 B456_004G053500 [nucleoplasm] R-GRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030557 Lateral root initiation none Gossypium raimondii B456_004G053500 R-GRA-5608164 B456_004G053500 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_004G053500 R-GRA-9658967 B456_004G053500 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_004G053900 R-GRA-5654816-3 B456_004G053900 [nucleoplasm] R-GRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654828 Strigolactone signaling none Gossypium raimondii B456_004G054500 R-GRA-5632341 B456_004G054500 [cytosol] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_004G054500 R-GRA-5632170 phospho-B456_004G054500 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_004G057400 R-GRA-1128528-2 B456_004G057400 [plasma membrane] R-GRA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119314 Cellulose biosynthesis none Gossypium raimondii B456_004G062100 R-GRA-1122827-8 B456_004G062100 [cytosol] R-GRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119334 Ethylene biosynthesis from methionine none Gossypium raimondii B456_004G063100 R-GRA-9026148-2 B456_004G063100 [mitochondrion] R-GRA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119458 Glutamate degradation none Gossypium raimondii B456_004G063100 R-GRA-1130288-2 B456_004G063100 [cytosol] R-GRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119610 Biotin biosynthesis II none Gossypium raimondii B456_004G064800 R-GRA-1130304-2 B456_004G064800 [cytosol] R-GRA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119291 Nitrate assimilation none Gossypium raimondii B456_004G065900 R-GRA-1123087-3 B456_004G065900 [plasma membrane] R-GRA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119314 Cellulose biosynthesis none Gossypium raimondii B456_004G066100 R-GRA-9609343 B456_004G066100 [cytosol] R-GRA-9609352 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9609352 Lycopene catabolism none Gossypium raimondii B456_004G066700 R-GRA-1126307 B456_004G066700 [cytosol] R-GRA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119370 Sterol biosynthesis none Gossypium raimondii B456_004G067000 R-GRA-9658681 B456_004G067000 [plasma membrane] R-GRA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119567 Beta-alanine biosynthesis I none Gossypium raimondii B456_004G076300 R-GRA-3321270 B456_004G076300 [chloroplast inner membrane] R-GRA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119287 Vitamin E biosynthesis none Gossypium raimondii B456_004G076800 R-GRA-8934084-3 B456_004G076800 [nucleoplasm] R-GRA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928995 Drought escape (DE) via ABA-dependent pathway none Gossypium raimondii B456_004G076900 R-GRA-9924379 HSFA2D [nucleoplasm] R-GRA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924451 Shoot (tiller) formation and regulation of tiller angle none Gossypium raimondii B456_004G078000 R-GRA-1128594-2 B456_004G078000 [cytosol] R-GRA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119349 S-methylmethionine cycle none Gossypium raimondii B456_004G078000 R-GRA-1128594-2 B456_004G078000 [cytosol] R-GRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119400 Methionine biosynthesis II none Gossypium raimondii B456_004G079500 R-GRA-1128337-2 B456_004G079500 [plastid stroma] R-GRA-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119308 Momilactone biosynthesis none Gossypium raimondii B456_004G079500 R-GRA-1128244-2 B456_004G079500 [chloroplast] R-GRA-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119348 Ent-kaurene biosynthesis none Gossypium raimondii B456_004G083200 R-GRA-1128534-2 B456_004G083200 [cytosol] R-GRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119437 Glutathione redox reactions I none Gossypium raimondii B456_004G085900 R-GRA-5608164-2 B456_004G085900 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_004G085900 R-GRA-5608164-2 B456_004G085900 [nucleoplasm] R-GRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030557 Lateral root initiation none Gossypium raimondii B456_004G085900 R-GRA-5608164-2 B456_004G085900 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_004G085900 R-GRA-9658967-2 B456_004G085900 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_004G087300 R-GRA-1123430 B456_004G087300 [cytosol] R-GRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119437 Glutathione redox reactions I none Gossypium raimondii B456_004G092100 R-GRA-1129769-2 B456_004G092100 [cytosol] R-GRA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119332 Jasmonic acid biosynthesis none Gossypium raimondii B456_004G092100 R-GRA-1129769-2 B456_004G092100 [cytosol] R-GRA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119618 13-LOX and 13-HPL pathway none Gossypium raimondii B456_004G095400 R-GRA-1127527 B456_004G095400 [cytosol] R-GRA-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Gossypium raimondii B456_004G103500 R-GRA-1123210 B456_004G103500 [cytosol] R-GRA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119516 Trehalose biosynthesis I none Gossypium raimondii B456_004G105200 R-GRA-1129203 B456_004G105200 [cytosol] R-GRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119428 GDP-D-rhamnose biosynthesis none Gossypium raimondii B456_004G105200 R-GRA-1129203 B456_004G105200 [cytosol] R-GRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Gossypium raimondii B456_004G111100 R-GRA-4723660 B456_004G111100 [plastid stroma] R-GRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119464 Methylerythritol phosphate pathway none Gossypium raimondii B456_004G111100 R-GRA-1125869 B456_004G111100 [cytosol] R-GRA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119594 Pyridoxal 5'-phosphate biosynthesis none Gossypium raimondii B456_004G111100 R-GRA-1125869 B456_004G111100 [cytosol] R-GRA-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119629 Thiamine biosynthesis none Gossypium raimondii B456_004G113000 R-GRA-9826604 B456_004G113000 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_004G115100 R-GRA-1123059 B456_004G115100 [cytosol] R-GRA-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119317 Spermine biosynthesis none Gossypium raimondii B456_004G115100 R-GRA-1123059 B456_004G115100 [cytosol] R-GRA-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119343 Spermidine biosynthesis none Gossypium raimondii B456_004G126900 R-GRA-9618171 B456_004G126900 [plasma membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_004G128700 R-GRA-9918210-3 granule-bound starch synthase 1 (GBSSI, or Waxy) [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_004G128700 R-GRA-9918222-3 B456_004G128700 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_004G128700 R-GRA-9626344-3 B456_004G128700 [plastid stroma] R-GRA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9626305 Regulatory network of nutrient accumulation none Gossypium raimondii B456_004G131300 R-GRA-1128322 B456_004G131300 [cytosol] R-GRA-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119384 NAD biosynthesis I (from aspartate) none Gossypium raimondii B456_004G132700 R-GRA-1122936 B456_004G132700 [cytosol] R-GRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119452 Galactose degradation II none Gossypium raimondii B456_004G134600 R-GRA-9826647-5 B456_004G134600 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_004G137300 R-GRA-9607105-3 B456_004G137300 [mitochondrion] R-GRA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9607185 Generation of superoxide radicals none Gossypium raimondii B456_004G137800 R-GRA-1129922-2 B456_004G137800 [plastid stroma] R-GRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119464 Methylerythritol phosphate pathway none Gossypium raimondii B456_004G140500 R-GRA-5608164-3 B456_004G140500 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_004G140500 R-GRA-5608164-3 B456_004G140500 [nucleoplasm] R-GRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030557 Lateral root initiation none Gossypium raimondii B456_004G140500 R-GRA-5608164-3 B456_004G140500 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_004G140500 R-GRA-9658967-3 B456_004G140500 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_004G140600 R-GRA-8934069-2 B456_004G140600 [nucleoplasm] R-GRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934036 Long day regulated expression of florigens none Gossypium raimondii B456_004G140600 R-GRA-8934069-2 B456_004G140600 [nucleoplasm] R-GRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934108 Short day regulated expression of florigens none Gossypium raimondii B456_004G142700 R-GRA-1126115 B456_004G142700 [cytosol] R-GRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119452 Galactose degradation II none Gossypium raimondii B456_004G142700 R-GRA-1126115 B456_004G142700 [cytosol] R-GRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119465 Sucrose biosynthesis none Gossypium raimondii B456_004G144300 R-GRA-9640745 B456_004G144300 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_004G144300 R-GRA-9640745 B456_004G144300 [nucleoplasm] R-GRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675824 DNA replication Initiation none Gossypium raimondii B456_004G146800 R-GRA-1128366-2 B456_004G146800 [cytosol] R-GRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119334 Ethylene biosynthesis from methionine none Gossypium raimondii B456_004G146800 R-GRA-1128366-2 B456_004G146800 [cytosol] R-GRA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119501 S-adenosyl-L-methionine cycle none Gossypium raimondii B456_004G146800 R-GRA-1128366-2 B456_004G146800 [cytosol] R-GRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119624 Methionine salvage pathway none Gossypium raimondii B456_004G146800 R-GRA-9025738-4 B456_004G146800 [cytosol] R-GRA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9025754 Mugineic acid biosynthesis none Gossypium raimondii B456_004G147500 R-GRA-1129914-4 B456_004G147500 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_004G147600 R-GRA-9826674-2 B456_004G147600 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_004G148200 R-GRA-9916298-3 OsEXPA3 [extracellular region] R-GRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9916190 Root angle formation: elongation and curvature response none Gossypium raimondii B456_004G152800 R-GRA-6787202-2 B456_004G152800 [cytosol] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_004G157100 R-GRA-1125556 B456_004G157100 [cytosol] R-GRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119410 Ascorbate biosynthesis none Gossypium raimondii B456_004G157100 R-GRA-1125556 B456_004G157100 [cytosol] R-GRA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119628 GDP-mannose metabolism none Gossypium raimondii B456_004G160400 R-GRA-1129411 B456_004G160400 [cytosol] R-GRA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119496 Pantothenate biosynthesis I none Gossypium raimondii B456_004G160400 R-GRA-1129411 B456_004G160400 [cytosol] R-GRA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119544 Pantothenate biosynthesis II none Gossypium raimondii B456_004G160600 R-GRA-1126602-2 B456_004G160600 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_004G160600 R-GRA-1126602-2 B456_004G160600 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_004G160600 R-GRA-5606494-2 B456_004G160600 [plastid stroma] R-GRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119419 Lysine biosynthesis VI none Gossypium raimondii B456_004G162700 R-GRA-1126421-2 B456_004G162700 [cytosol] R-GRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119428 GDP-D-rhamnose biosynthesis none Gossypium raimondii B456_004G162700 R-GRA-1126421-2 B456_004G162700 [cytosol] R-GRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Gossypium raimondii B456_004G164200 R-GRA-9924407 EXPB5 [basolateral plasma membrane] R-GRA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924451 Shoot (tiller) formation and regulation of tiller angle none Gossypium raimondii B456_004G165300 R-GRA-9826639-2 B456_004G165300 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_004G167300 R-GRA-8933728-6 B456_004G167300 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_004G170800 R-GRA-9658681-2 B456_004G170800 [plasma membrane] R-GRA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119567 Beta-alanine biosynthesis I none Gossypium raimondii B456_004G172400 R-GRA-1123087-2 B456_004G172400 [plasma membrane] R-GRA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119314 Cellulose biosynthesis none Gossypium raimondii B456_004G172500 R-GRA-9639088-3 B456_004G172500 [plasma membrane] R-GRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639136 Response to Aluminum stress none Gossypium raimondii B456_004G177200 R-GRA-1128857 B456_004G177200 [cytosol] R-GRA-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119609 Phaseic acid biosynthesis none Gossypium raimondii B456_004G182200 R-GRA-1122783-3 B456_004G182200 [chloroplast stroma] R-GRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119402 Phospholipid biosynthesis I none Gossypium raimondii B456_004G184800 R-GRA-6787119-3 B456_004G184800 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_004G190300 R-GRA-1130181-4 B456_004G190300 [plastid stroma] R-GRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119430 Chorismate biosynthesis none Gossypium raimondii B456_004G191000 R-GRA-8933728-3 B456_004G191000 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_004G196900 R-GRA-1125340 B456_004G196900 [plastid stroma] R-GRA-1119274 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119274 Monoterpene biosynthesis none Gossypium raimondii B456_004G196900 R-GRA-1125340 B456_004G196900 [plastid stroma] R-GRA-1119593 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119593 Oleoresin monoterpene volatiles biosynthesis none Gossypium raimondii B456_004G200800 R-GRA-1126888 B456_004G200800 [cytosol] R-GRA-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119360 Fructan biosynthesis none Gossypium raimondii B456_004G204300 R-GRA-3899389 B456_004G204300 [plasma membrane] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_004G204300 R-GRA-3899371 phospho-B456_004G204300 [plasma membrane] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_004G205900 R-GRA-1130078 B456_004G205900 [cytosol] R-GRA-1119440 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119440 Anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside) none Gossypium raimondii B456_004G205900 R-GRA-2672102 B456_004G205900 [cytosol] R-GRA-1119514 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119514 Anthocyanin biosynthesis (delphinidin 3-O-glucoside) none Gossypium raimondii B456_004G206100 R-GRA-9639892 B456_004G206100 [cell wall] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_004G207000 R-GRA-1128328-3 B456_004G207000 [cytosol] R-GRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119615 Mevalonate pathway none Gossypium raimondii B456_004G208000 R-GRA-9826696-3 B456_004G208000 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_004G209200 R-GRA-1130394-2 B456_004G209200 [cytosol] R-GRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119452 Galactose degradation II none Gossypium raimondii B456_004G211400 R-GRA-1126615-3 B456_004G211400 [cytosol] R-GRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119437 Glutathione redox reactions I none Gossypium raimondii B456_004G214300 R-GRA-5679398-6 B456_004G214300 [cytosol] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_004G214900 R-GRA-6787105 B456_004G214900 [cytosol] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_004G215500 R-GRA-1128534 B456_004G215500 [cytosol] R-GRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119437 Glutathione redox reactions I none Gossypium raimondii B456_004G218800 R-GRA-1129781 B456_004G218800 [chloroplast] R-GRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119494 Tryptophan biosynthesis none Gossypium raimondii B456_004G222500 R-GRA-1128385 B456_004G222500 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_004G225500 R-GRA-9640789 B456_004G225500 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_004G227100 R-GRA-1127140-3 B456_004G227100 [cytosol] R-GRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119403 Removal of superoxide radicals none Gossypium raimondii B456_004G227200 R-GRA-1127140-2 B456_004G227200 [cytosol] R-GRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119403 Removal of superoxide radicals none Gossypium raimondii B456_004G227300 R-GRA-1127140 B456_004G227300 [cytosol] R-GRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119403 Removal of superoxide radicals none Gossypium raimondii B456_004G228600 R-GRA-1124778 B456_004G228600 [plastid stroma] R-GRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119464 Methylerythritol phosphate pathway none Gossypium raimondii B456_004G229000 R-GRA-9618056 B456_004G229000 [plasma membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_004G236400 R-GRA-9826705-3 OSH71 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_004G236500 R-GRA-9025712-4 B456_004G236500 [cytosol] R-GRA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9025754 Mugineic acid biosynthesis none Gossypium raimondii B456_004G238300 R-GRA-5632301-2 B456_004G238300 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_004G238300 R-GRA-5632301-2 B456_004G238300 [nucleoplasm] R-GRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654828 Strigolactone signaling none Gossypium raimondii B456_004G238300 R-GRA-5632301-2 B456_004G238300 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_004G242800 R-GRA-1129879 B456_004G242800 [cytosol] R-GRA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119436 Peptidoglycan biosynthesis I none Gossypium raimondii B456_004G243100 R-GRA-9826680-4 B456_004G243100 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_004G244100 R-GRA-5679398-5 B456_004G244100 [cytosol] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_004G245500 R-GRA-1126794-3 B456_004G245500 [cytosol] R-GRA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119331 Cysteine biosynthesis I none Gossypium raimondii B456_004G246100 R-GRA-1127705 B456_004G246100 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_004G246500 R-GRA-9682506 B456_004G246500 [cytosol] R-GRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119410 Ascorbate biosynthesis none Gossypium raimondii B456_004G248600 R-GRA-9035785 B456_004G248600 [nucleoplasm] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_004G248600 R-GRA-9035785 B456_004G248600 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_004G249400 R-GRA-5632268-4 B456_004G249400 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_004G250400 R-GRA-1127695 B456_004G250400 [plastid stroma] R-GRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119430 Chorismate biosynthesis none Gossypium raimondii B456_004G251500 R-GRA-1125151 B456_004G251500 [cytosol] R-GRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119400 Methionine biosynthesis II none Gossypium raimondii B456_004G251500 R-GRA-1125151 B456_004G251500 [cytosol] R-GRA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119501 S-adenosyl-L-methionine cycle none Gossypium raimondii B456_004G254500 R-GRA-3240749 B456_004G254500 [cytosol] R-GRA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Gossypium raimondii B456_004G254500 R-GRA-9681918 B456_004G254500 [cytosol] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_004G255900 R-GRA-8879040-2 B456_004G255900 [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_004G259300 R-GRA-5632174 B456_004G259300 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_004G259300 R-GRA-5632174 B456_004G259300 [nucleoplasm] R-GRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654828 Strigolactone signaling none Gossypium raimondii B456_004G259300 R-GRA-5632174 B456_004G259300 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_004G259300 R-GRA-5632174 B456_004G259300 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_004G260800 R-GRA-9681905 B456_004G260800 [Golgi membrane] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_004G262800 R-GRA-1127916 B456_004G262800 [plastid stroma] R-GRA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119367 Polyisoprenoid biosynthesis none Gossypium raimondii B456_004G262800 R-GRA-1127916 B456_004G262800 [plastid stroma] R-GRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119615 Mevalonate pathway none Gossypium raimondii B456_004G267200 R-GRA-1125926 B456_004G267200 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_004G267200 R-GRA-1125926 B456_004G267200 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_004G267200 R-GRA-1125926 B456_004G267200 [cytosol] R-GRA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119295 Homoserine biosynthesis none Gossypium raimondii B456_004G267200 R-GRA-5606498 B456_004G267200 [plastid stroma] R-GRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119419 Lysine biosynthesis VI none Gossypium raimondii B456_004G270800 R-GRA-5221144-3 B456_004G270800 [plastid] R-GRA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119374 Abscisic acid biosynthesis none Gossypium raimondii B456_004G273500 R-GRA-1129203-2 B456_004G273500 [cytosol] R-GRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119428 GDP-D-rhamnose biosynthesis none Gossypium raimondii B456_004G273500 R-GRA-1129203-2 B456_004G273500 [cytosol] R-GRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Gossypium raimondii B456_004G274100 R-GRA-8933766 B456_004G274100 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_004G280500 R-GRA-5633387 B456_004G280500 [mitochondrial matrix] R-GRA-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119445 Beta-alanine biosynthesis II none Gossypium raimondii B456_004G284300 R-GRA-6788127 B456_004G284300 [nucleoplasm] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_004G284300 R-GRA-6788179 B456_004G284300 [cytosol] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_004G284400 R-GRA-4415101 B456_004G284400 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_004G284400 R-GRA-4415101 B456_004G284400 [cytosol] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_004G290300 R-GRA-5654957-2 B456_004G290300 [Golgi lumen] R-GRA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654909 Xylan biosynthesis none Gossypium raimondii B456_004G292400 R-GRA-9681915-4 B456_004G292400 [Golgi membrane] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_004G292800 R-GRA-1127574-3 B456_004G292800 [cytosol] R-GRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119465 Sucrose biosynthesis none Gossypium raimondii B456_004G292900 R-GRA-1129485 B456_004G292900 [cytosol] R-GRA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119341 Galactosylcyclitol biosynthesis none Gossypium raimondii B456_005G002100 R-GRA-8868904-2 B456_005G002100 [endoplasmic reticulum membrane] R-GRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8868949 Intracellular auxin transport none Gossypium raimondii B456_005G006500 R-GRA-1129539-3 B456_005G006500 [cytosol] R-GRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119610 Biotin biosynthesis II none Gossypium raimondii B456_005G007600 R-GRA-1124523 B456_005G007600 [cytosol] R-GRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119460 Isoleucine biosynthesis from threonine none Gossypium raimondii B456_005G007600 R-GRA-1124523 B456_005G007600 [cytosol] R-GRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119600 Valine biosynthesis none Gossypium raimondii B456_005G008700 R-GRA-9639789 B456_005G008700 [plasma membrane] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_005G011100 R-GRA-9675391-3 B456_005G011100 [nucleoplasm] R-GRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675508 Root elongation none Gossypium raimondii B456_005G028000 R-GRA-1129921 B456_005G028000 [cytosol] R-GRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119428 GDP-D-rhamnose biosynthesis none Gossypium raimondii B456_005G028000 R-GRA-1129921 B456_005G028000 [cytosol] R-GRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Gossypium raimondii B456_005G035200 R-GRA-1127733 B456_005G035200 [cytosol] R-GRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119460 Isoleucine biosynthesis from threonine none Gossypium raimondii B456_005G035200 R-GRA-1127733 B456_005G035200 [cytosol] R-GRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119600 Valine biosynthesis none Gossypium raimondii B456_005G035600 R-GRA-9930255 MPK15 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_005G035800 R-GRA-1129629-2 B456_005G035800 [plastid stroma] R-GRA-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119293 Glutamine biosynthesis I none Gossypium raimondii B456_005G035800 R-GRA-1129629-2 B456_005G035800 [plastid stroma] R-GRA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119443 Ammonia assimilation cycle none Gossypium raimondii B456_005G042100 R-GRA-1128902-2 B456_005G042100 [cytosol] R-GRA-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119271 Threonine degradation none Gossypium raimondii B456_005G042100 R-GRA-1128902-2 B456_005G042100 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_005G042100 R-GRA-9658656-2 B456_005G042100 [cytosol] R-GRA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119567 Beta-alanine biosynthesis I none Gossypium raimondii B456_005G044600 R-GRA-1128594 B456_005G044600 [cytosol] R-GRA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119349 S-methylmethionine cycle none Gossypium raimondii B456_005G044600 R-GRA-1128594 B456_005G044600 [cytosol] R-GRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119400 Methionine biosynthesis II none Gossypium raimondii B456_005G045800 R-GRA-1128257 B456_005G045800 [plastid stroma] R-GRA-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119529 Sulfate activation for sulfonation none Gossypium raimondii B456_005G046100 R-GRA-3321270-2 B456_005G046100 [chloroplast inner membrane] R-GRA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119287 Vitamin E biosynthesis none Gossypium raimondii B456_005G046500 R-GRA-1122892-3 B456_005G046500 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_005G046500 R-GRA-1122892-3 B456_005G046500 [nucleoplasm] R-GRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030557 Lateral root initiation none Gossypium raimondii B456_005G046500 R-GRA-1122892-3 B456_005G046500 [nucleoplasm] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_005G047900 R-GRA-5225766 B456_005G047900 [nucleoplasm] R-GRA-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5225756 Ethylene mediated signaling none Gossypium raimondii B456_005G050000 R-GRA-8933738 B456_005G050000 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_005G060400 R-GRA-9639810-4 B456_005G060400 [cell wall] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_005G069400 R-GRA-8986605 B456_005G069400 [mitochondrial matrix] R-GRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119312 Photorespiration none Gossypium raimondii B456_005G069400 R-GRA-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-GRA-1119351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119351 Mitochondrial pyruvate metabolism none Gossypium raimondii B456_005G069400 R-GRA-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_005G073200 R-GRA-9612372 B456_005G073200 [mitochondrial matrix] R-GRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119612 Cysteine degradation none Gossypium raimondii B456_005G078500 R-GRA-9928771-2 B456_005G078500 [nucleoplasm] R-GRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928831 Severe drought none Gossypium raimondii B456_005G081700 R-GRA-1122242-4 B456_005G081700 [cytosol] R-GRA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119267 Phenylalanine degradation III none Gossypium raimondii B456_005G081800 R-GRA-6787181-3 B456_005G081800 [cytosol] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_005G081900 R-GRA-1122242-7 B456_005G081900 [cytosol] R-GRA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119267 Phenylalanine degradation III none Gossypium raimondii B456_005G082300 R-GRA-1122242 B456_005G082300 [cytosol] R-GRA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119267 Phenylalanine degradation III none Gossypium raimondii B456_005G082400 R-GRA-1122242-2 B456_005G082400 [cytosol] R-GRA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119267 Phenylalanine degradation III none Gossypium raimondii B456_005G085000 R-GRA-9611889-2 B456_005G085000 [mitochondrial matrix] R-GRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119479 Valine degradation none Gossypium raimondii B456_005G087200 R-GRA-3240749-2 B456_005G087200 [cytosol] R-GRA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Gossypium raimondii B456_005G087200 R-GRA-9681918-2 B456_005G087200 [cytosol] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_005G088800 R-GRA-9930308 SNAC2 (OsNAC6) [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_005G091600 R-GRA-1130304 B456_005G091600 [cytosol] R-GRA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119291 Nitrate assimilation none Gossypium raimondii B456_005G092100 R-GRA-8987574 B456_005G092100 [mitochondrial matrix] R-GRA-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119311 Glycine biosynthesis I none Gossypium raimondii B456_005G094800 R-GRA-9826680-5 B456_005G094800 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_005G095400 R-GRA-5632192 B456_005G095400 [cytosol] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_005G097300 R-GRA-5654942-2 B456_005G097300 [Golgi lumen] R-GRA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654909 Xylan biosynthesis none Gossypium raimondii B456_005G098100 R-GRA-9826652 OSH15 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_005G098100 R-GRA-9631619 B456_005G098100 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_005G098300 R-GRA-1122974-2 B456_005G098300 [mitochondrial matrix] R-GRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119479 Valine degradation none Gossypium raimondii B456_005G098700 R-GRA-9035593-3 B456_005G098700 [cytosol] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_005G098700 R-GRA-9035634-3 B456_005G098700 [nucleoplasm] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_005G098700 R-GRA-9035593-3 B456_005G098700 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_005G098700 R-GRA-9035634-3 B456_005G098700 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_005G101000 R-GRA-5654750-2 B456_005G101000 [cytosol] R-GRA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119393 Asparagine degradation I none Gossypium raimondii B456_005G101100 R-GRA-9640671-7 B456_005G101100 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_005G101100 R-GRA-9640671-7 B456_005G101100 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_005G101700 R-GRA-9920344-3 B456_005G101700 [nucleoplasm] R-GRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934108 Short day regulated expression of florigens none Gossypium raimondii B456_005G102000 R-GRA-9826683-4 HSFB4A [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_005G102300 R-GRA-9928801 B456_005G102300 [nucleoplasm] R-GRA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928995 Drought escape (DE) via ABA-dependent pathway none Gossypium raimondii B456_005G107000 R-GRA-5632334-3 B456_005G107000 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_005G107000 R-GRA-5632197-3 phospho-B456_005G107000 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_005G107000 R-GRA-5632183-3 phospho-B456_005G107000 [cytosol] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_005G107000 R-GRA-5632334-3 B456_005G107000 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_005G110700 R-GRA-9826692-3 B456_005G110700 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_005G113100 R-GRA-5632232-4 phospho-B456_005G113100 [plasma membrane] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_005G113800 R-GRA-9918274 SBE1 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_005G113800 R-GRA-9626342 B456_005G113800 [plastid stroma] R-GRA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9626305 Regulatory network of nutrient accumulation none Gossypium raimondii B456_005G114000 R-GRA-4752546-7 B456_005G114000 [plastid stroma] R-GRA-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119498 Phylloquinone biosynthesis none Gossypium raimondii B456_005G119700 R-GRA-1128624 B456_005G119700 [mitochondrial inner membrane] R-GRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119479 Valine degradation none Gossypium raimondii B456_005G120400 R-GRA-9640753-2 B456_005G120400 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_005G120400 R-GRA-9640753-2 B456_005G120400 [nucleoplasm] R-GRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675824 DNA replication Initiation none Gossypium raimondii B456_005G122100 R-GRA-1126034 B456_005G122100 [cytosol] R-GRA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119534 Pyridoxal 5'-phosphate salvage pathway none Gossypium raimondii B456_005G122100 R-GRA-1126034 B456_005G122100 [cytosol] R-GRA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119594 Pyridoxal 5'-phosphate biosynthesis none Gossypium raimondii B456_005G123100 R-GRA-9675391 B456_005G123100 [nucleoplasm] R-GRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675508 Root elongation none Gossypium raimondii B456_005G127500 R-GRA-1127173 B456_005G127500 [cytosol] R-GRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119540 Leucine biosynthesis none Gossypium raimondii B456_005G131500 R-GRA-1129113-2 B456_005G131500 [cytosol] R-GRA-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119298 Glutathione redox reactions II none Gossypium raimondii B456_005G131500 R-GRA-1129113-2 B456_005G131500 [cytosol] R-GRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119437 Glutathione redox reactions I none Gossypium raimondii B456_005G132000 R-GRA-8854127-2 B456_005G132000 [cytosol] R-GRA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119556 Choline biosynthesis I none Gossypium raimondii B456_005G132100 R-GRA-4752546 B456_005G132100 [plastid stroma] R-GRA-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119498 Phylloquinone biosynthesis none Gossypium raimondii B456_005G132300 R-GRA-5149644 B456_005G132300 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_005G134600 R-GRA-5679470-6 B456_005G134600 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_005G138100 R-GRA-9826681 EREBP129 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_005G139100 R-GRA-4752546-3 B456_005G139100 [plastid stroma] R-GRA-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119498 Phylloquinone biosynthesis none Gossypium raimondii B456_005G140600 R-GRA-9025463-3 B456_005G140600 [endoplasmic reticulum membrane] R-GRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119325 Sphingolipid metabolism none Gossypium raimondii B456_005G140800 R-GRA-9025463-2 B456_005G140800 [endoplasmic reticulum membrane] R-GRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119325 Sphingolipid metabolism none Gossypium raimondii B456_005G140900 R-GRA-9025463 B456_005G140900 [endoplasmic reticulum membrane] R-GRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119325 Sphingolipid metabolism none Gossypium raimondii B456_005G141000 R-GRA-9025463-5 B456_005G141000 [endoplasmic reticulum membrane] R-GRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119325 Sphingolipid metabolism none Gossypium raimondii B456_005G142300 R-GRA-9636827 B456_005G142300 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_005G144700 R-GRA-9681886-4 B456_005G144700 [cytosol] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_005G148500 R-GRA-9025728-3 B456_005G148500 [plasma membrane] R-GRA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9025727 Iron uptake and transport in root vascular system none Gossypium raimondii B456_005G152400 R-GRA-1128804 B456_005G152400 [cytosol] R-GRA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119516 Trehalose biosynthesis I none Gossypium raimondii B456_005G153300 R-GRA-1128637-2 B456_005G153300 [chloroplast] R-GRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119494 Tryptophan biosynthesis none Gossypium raimondii B456_005G154300 R-GRA-5679470-3 B456_005G154300 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_005G158200 R-GRA-5679402 B456_005G158200 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_005G161800 R-GRA-1128126-2 B456_005G161800 [endosome] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_005G161800 R-GRA-5679348-2 B456_005G161800 [plasma membrane] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_005G163100 R-GRA-8868990 B456_005G163100 [endoplasmic reticulum membrane] R-GRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8868949 Intracellular auxin transport none Gossypium raimondii B456_005G163200 R-GRA-1126320 B456_005G163200 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_005G164500 R-GRA-9646043 B456_005G164500 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_005G164500 R-GRA-9646043 B456_005G164500 [nucleoplasm] R-GRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675782 Maturation none Gossypium raimondii B456_005G164500 R-GRA-9646043 B456_005G164500 [nucleoplasm] R-GRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675815 Leading strand synthesis none Gossypium raimondii B456_005G164500 R-GRA-9646043 B456_005G164500 [nucleoplasm] R-GRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675824 DNA replication Initiation none Gossypium raimondii B456_005G164500 R-GRA-9646043 B456_005G164500 [nucleoplasm] R-GRA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675885 Lagging strand synthesis none Gossypium raimondii B456_005G172100 R-GRA-1122785 B456_005G172100 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_005G172100 R-GRA-1126726 B456_005G172100 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_005G172100 R-GRA-1122785 B456_005G172100 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_005G172100 R-GRA-1126726 B456_005G172100 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_005G172100 R-GRA-1122785 B456_005G172100 [cytosol] R-GRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119570 Cytosolic glycolysis none Gossypium raimondii B456_005G172800 R-GRA-5632129-3 B456_005G172800 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_005G179600 R-GRA-8987548 B456_005G179600 [peroxisomal matrix] R-GRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119312 Photorespiration none Gossypium raimondii B456_005G179700 R-GRA-1130162-2 B456_005G179700 [chloroplast] R-GRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119494 Tryptophan biosynthesis none Gossypium raimondii B456_005G180100 R-GRA-1126549-3 B456_005G180100 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_005G181500 R-GRA-4752547 B456_005G181500 [plastid stroma] R-GRA-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119498 Phylloquinone biosynthesis none Gossypium raimondii B456_005G182300 R-GRA-1130327 B456_005G182300 [cytosol] R-GRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119586 Cyanate degradation none Gossypium raimondii B456_005G183800 R-GRA-1125638 B456_005G183800 [cytosol] R-GRA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119516 Trehalose biosynthesis I none Gossypium raimondii B456_005G185600 R-GRA-9640729 B456_005G185600 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_005G185600 R-GRA-9640729 B456_005G185600 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_005G186100 R-GRA-4752546-9 B456_005G186100 [plastid stroma] R-GRA-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119498 Phylloquinone biosynthesis none Gossypium raimondii B456_005G190200 R-GRA-1129111-2 B456_005G190200 [cytosol] R-GRA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119349 S-methylmethionine cycle none Gossypium raimondii B456_005G190200 R-GRA-1129111-2 B456_005G190200 [cytosol] R-GRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119400 Methionine biosynthesis II none Gossypium raimondii B456_005G192900 R-GRA-1123250 B456_005G192900 [cytosol] R-GRA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119265 Tetrahydrofolate biosynthesis I none Gossypium raimondii B456_005G192900 R-GRA-1123250 B456_005G192900 [cytosol] R-GRA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119523 Tetrahydrofolate biosynthesis II none Gossypium raimondii B456_005G197100 R-GRA-9930242-2 B456_005G197100 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_005G199900 R-GRA-1129547-4 B456_005G199900 [cytosol] R-GRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119389 Phenylalanine biosynthesis I none Gossypium raimondii B456_005G199900 R-GRA-1129547-4 B456_005G199900 [cytosol] R-GRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119400 Methionine biosynthesis II none Gossypium raimondii B456_005G199900 R-GRA-1129547-4 B456_005G199900 [cytosol] R-GRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119506 tyrosine degradation I none Gossypium raimondii B456_005G200100 R-GRA-1129547-2 B456_005G200100 [cytosol] R-GRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119389 Phenylalanine biosynthesis I none Gossypium raimondii B456_005G200100 R-GRA-1129547-2 B456_005G200100 [cytosol] R-GRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119400 Methionine biosynthesis II none Gossypium raimondii B456_005G200100 R-GRA-1129547-2 B456_005G200100 [cytosol] R-GRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119506 tyrosine degradation I none Gossypium raimondii B456_005G211000 R-GRA-4827041 B456_005G211000 [plastid stroma] R-GRA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-4827054 Tetrapyrrole biosynthesis I none Gossypium raimondii B456_005G211200 R-GRA-1125237 B456_005G211200 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_005G211300 R-GRA-9826597 B456_005G211300 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_005G211900 R-GRA-8933787 B456_005G211900 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_005G213100 R-GRA-3315084 B456_005G213100 [cytosol] R-GRA-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119342 Gamma-glutamyl cycle none Gossypium raimondii B456_005G213700 R-GRA-5632121-3 B456_005G213700 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_005G214700 R-GRA-1124032-2 B456_005G214700 [cytosol] R-GRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119540 Leucine biosynthesis none Gossypium raimondii B456_005G215000 R-GRA-6787113 B456_005G215000 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_005G215400 R-GRA-9826666 B456_005G215400 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_005G215500 R-GRA-1124496-9 B456_005G215500 [cytosol] R-GRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119615 Mevalonate pathway none Gossypium raimondii B456_005G215600 R-GRA-1124496-8 B456_005G215600 [cytosol] R-GRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119615 Mevalonate pathway none Gossypium raimondii B456_005G215700 R-GRA-1124496-4 B456_005G215700 [cytosol] R-GRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119615 Mevalonate pathway none Gossypium raimondii B456_005G215800 R-GRA-1124496-7 B456_005G215800 [cytosol] R-GRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119615 Mevalonate pathway none Gossypium raimondii B456_005G216500 R-GRA-5221147 B456_005G216500 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_005G216700 R-GRA-1125974 B456_005G216700 [cytosol] R-GRA-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119262 Threonine biosynthesis from homoserine none Gossypium raimondii B456_005G216700 R-GRA-1125974 B456_005G216700 [cytosol] R-GRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119400 Methionine biosynthesis II none Gossypium raimondii B456_005G218300 R-GRA-5606521 B456_005G218300 [plastid stroma] R-GRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119419 Lysine biosynthesis VI none Gossypium raimondii B456_005G222500 R-GRA-1122295 B456_005G222500 [cytosol] R-GRA-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119353 Linear furanocoumarin biosynthesis none Gossypium raimondii B456_005G223700 R-GRA-1128950-2 B456_005G223700 [cytosol] R-GRA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119379 Flavin biosynthesis none Gossypium raimondii B456_005G225400 R-GRA-1128980 B456_005G225400 [cytosol] R-GRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119586 Cyanate degradation none Gossypium raimondii B456_005G226800 R-GRA-1126269 B456_005G226800 [mitochondrial matrix] R-GRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119479 Valine degradation none Gossypium raimondii B456_005G226900 R-GRA-1126269-2 B456_005G226900 [mitochondrial matrix] R-GRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119479 Valine degradation none Gossypium raimondii B456_005G229100 R-GRA-1128745-3 B456_005G229100 [plastid stroma] R-GRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119464 Methylerythritol phosphate pathway none Gossypium raimondii B456_005G229400 R-GRA-9639029 B456_005G229400 [cytosol] R-GRA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119434 Phytic acid biosynthesis (lipid-independent) none Gossypium raimondii B456_005G232300 R-GRA-8879027-2 B456_005G232300 [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_005G233100 R-GRA-6788084 B456_005G233100 [nucleoplasm] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_005G234800 R-GRA-1125967 B456_005G234800 [cytosol] R-GRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119316 Phenylpropanoid biosynthesis none Gossypium raimondii B456_005G235600 R-GRA-9640671-6 B456_005G235600 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_005G235600 R-GRA-9640671-6 B456_005G235600 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_005G237400 R-GRA-9928801-5 B456_005G237400 [nucleoplasm] R-GRA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928995 Drought escape (DE) via ABA-dependent pathway none Gossypium raimondii B456_005G239800 R-GRA-4415007-3 B456_005G239800 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_005G239800 R-GRA-4415016-3 phospho-B456_005G239800 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_005G239800 R-GRA-4415007-3 B456_005G239800 [cytosol] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_005G242100 R-GRA-8987574-3 B456_005G242100 [mitochondrial matrix] R-GRA-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119311 Glycine biosynthesis I none Gossypium raimondii B456_005G244900 R-GRA-1127562-3 B456_005G244900 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_005G244900 R-GRA-1130466-3 B456_005G244900 [cytosol] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_005G245400 R-GRA-1125417 B456_005G245400 [cytosol] R-GRA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119265 Tetrahydrofolate biosynthesis I none Gossypium raimondii B456_005G245400 R-GRA-1125417 B456_005G245400 [cytosol] R-GRA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119523 Tetrahydrofolate biosynthesis II none Gossypium raimondii B456_005G246000 R-GRA-4788601 B456_005G246000 [plastid stroma] R-GRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119509 Histidine biosynthesis I none Gossypium raimondii B456_005G247700 R-GRA-1128707-2 B456_005G247700 [cytosol] R-GRA-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Gossypium raimondii B456_005G247700 R-GRA-1128707-2 B456_005G247700 [cytosol] R-GRA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119370 Sterol biosynthesis none Gossypium raimondii B456_005G247700 R-GRA-1128707-2 B456_005G247700 [cytosol] R-GRA-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119439 Cholesterol biosynthesis III (via desmosterol) none Gossypium raimondii B456_005G247700 R-GRA-1128707-2 B456_005G247700 [cytosol] R-GRA-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119559 Cholesterol biosynthesis I none Gossypium raimondii B456_005G248700 R-GRA-1123832-3 B456_005G248700 [cytosol] R-GRA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119304 Putrescine biosynthesis II none Gossypium raimondii B456_005G248700 R-GRA-1123832-3 B456_005G248700 [cytosol] R-GRA-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119447 Putrescine biosynthesis I none Gossypium raimondii B456_005G251900 R-GRA-1123561 B456_005G251900 [cytosol] R-GRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119624 Methionine salvage pathway none Gossypium raimondii B456_005G254100 R-GRA-1123786-2 B456_005G254100 R-GRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119403 Removal of superoxide radicals none Gossypium raimondii B456_005G258300 R-GRA-1127357 B456_005G258300 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_005G258300 R-GRA-1127357 B456_005G258300 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_005G258500 R-GRA-1125494 B456_005G258500 [endoplasmic reticulum membrane] R-GRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119402 Phospholipid biosynthesis I none Gossypium raimondii B456_005G259700 R-GRA-9928771-3 B456_005G259700 [nucleoplasm] R-GRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928831 Severe drought none Gossypium raimondii B456_005G262500 R-GRA-5606478 B456_005G262500 [plastid stroma] R-GRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119419 Lysine biosynthesis VI none Gossypium raimondii B456_005G268500 R-GRA-9640786 B456_005G268500 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_005G268500 R-GRA-9640786 B456_005G268500 [nucleoplasm] R-GRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675824 DNA replication Initiation none Gossypium raimondii B456_006G000200 R-GRA-1126354 B456_006G000200 [cytosol] R-GRA-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119513 Pinobanksin biosynthesis none Gossypium raimondii B456_006G000200 R-GRA-1126354 B456_006G000200 [cytosol] R-GRA-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119531 Flavonoid biosynthesis none Gossypium raimondii B456_006G000200 R-GRA-1126354 B456_006G000200 [cytosol] R-GRA-1119630 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119630 Resveratrol biosynthesis none Gossypium raimondii B456_006G000400 R-GRA-1126714 B456_006G000400 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_006G000400 R-GRA-1126714 B456_006G000400 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_006G000400 R-GRA-1126714 B456_006G000400 [cytosol] R-GRA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119295 Homoserine biosynthesis none Gossypium raimondii B456_006G000400 R-GRA-5606484 B456_006G000400 [plastid stroma] R-GRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119419 Lysine biosynthesis VI none Gossypium raimondii B456_006G002800 R-GRA-1123211 B456_006G002800 [cytosol] R-GRA-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Gossypium raimondii B456_006G002800 R-GRA-1123211 B456_006G002800 [cytosol] R-GRA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119370 Sterol biosynthesis none Gossypium raimondii B456_006G002800 R-GRA-1123211 B456_006G002800 [cytosol] R-GRA-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119439 Cholesterol biosynthesis III (via desmosterol) none Gossypium raimondii B456_006G002800 R-GRA-1123211 B456_006G002800 [cytosol] R-GRA-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119559 Cholesterol biosynthesis I none Gossypium raimondii B456_006G003100 R-GRA-9640753 B456_006G003100 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_006G003100 R-GRA-9640753 B456_006G003100 [nucleoplasm] R-GRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675824 DNA replication Initiation none Gossypium raimondii B456_006G004600 R-GRA-1127442 B456_006G004600 [cytosol] R-GRA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119281 Aspartate biosynthesis I none Gossypium raimondii B456_006G004600 R-GRA-5632001 B456_006G004600 [plastid stroma] R-GRA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119553 Asparagine biosynthesis none Gossypium raimondii B456_006G005100 R-GRA-9930180-2 OsNAC3 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_006G006000 R-GRA-9025372-2 B456_006G006000 [endoplasmic reticulum membrane] R-GRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119402 Phospholipid biosynthesis I none Gossypium raimondii B456_006G007000 R-GRA-1126955 B456_006G007000 [plastid] R-GRA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119407 Ureide biosynthesis none Gossypium raimondii B456_006G008700 R-GRA-5608154-2 B456_006G008700 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_006G008800 R-GRA-5632266 B456_006G008800 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_006G008800 R-GRA-5632266 B456_006G008800 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_006G009000 R-GRA-6788026 B456_006G009000 [cytosol] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_006G010000 R-GRA-6787262-3 B456_006G010000 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_006G014400 R-GRA-8987535 B456_006G014400 [chloroplast] R-GRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119312 Photorespiration none Gossypium raimondii B456_006G016400 R-GRA-1130101-2 B456_006G016400 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_006G024700 R-GRA-4752546-4 B456_006G024700 [plastid stroma] R-GRA-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119498 Phylloquinone biosynthesis none Gossypium raimondii B456_006G029800 R-GRA-1127292 B456_006G029800 [plastid stroma] R-GRA-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Gossypium raimondii B456_006G030300 R-GRA-1130327-6 B456_006G030300 [cytosol] R-GRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119586 Cyanate degradation none Gossypium raimondii B456_006G032900 R-GRA-1127752-2 B456_006G032900 [cytosol] R-GRA-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119417 Stachyose biosynthesis none Gossypium raimondii B456_006G034800 R-GRA-3240748 B456_006G034800 [cytosol] R-GRA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Gossypium raimondii B456_006G036200 R-GRA-9025351 B456_006G036200 [cytosol] R-GRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119402 Phospholipid biosynthesis I none Gossypium raimondii B456_006G038500 R-GRA-5632129-2 B456_006G038500 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_006G038900 R-GRA-1122785-5 B456_006G038900 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_006G038900 R-GRA-1126726-5 B456_006G038900 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_006G038900 R-GRA-1122785-5 B456_006G038900 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_006G038900 R-GRA-1126726-5 B456_006G038900 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_006G038900 R-GRA-1122785-5 B456_006G038900 [cytosol] R-GRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119570 Cytosolic glycolysis none Gossypium raimondii B456_006G041100 R-GRA-1124138-3 B456_006G041100 [cytosol] R-GRA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119394 Pantothenate and coenzyme A biosynthesis III none Gossypium raimondii B456_006G041700 R-GRA-9612406-2 B456_006G041700 [mitochondrial matrix] R-GRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119612 Cysteine degradation none Gossypium raimondii B456_006G046200 R-GRA-8879029-6 DREB1G [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_006G046200 R-GRA-8879085-6 B456_006G046200 [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_006G046200 R-GRA-8879050-3 CBF1 homolog [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_006G046600 R-GRA-1129478 B456_006G046600 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_006G046600 R-GRA-1129478 B456_006G046600 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_006G046600 R-GRA-5606483 B456_006G046600 [plastid stroma] R-GRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119419 Lysine biosynthesis VI none Gossypium raimondii B456_006G051500 R-GRA-1128902 B456_006G051500 [cytosol] R-GRA-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119271 Threonine degradation none Gossypium raimondii B456_006G051500 R-GRA-1128902 B456_006G051500 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_006G051500 R-GRA-9658656 B456_006G051500 [cytosol] R-GRA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119567 Beta-alanine biosynthesis I none Gossypium raimondii B456_006G053200 R-GRA-9612372-3 B456_006G053200 [mitochondrial matrix] R-GRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119612 Cysteine degradation none Gossypium raimondii B456_006G057000 R-GRA-1124285 B456_006G057000 [cytosol] R-GRA-1119284 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119284 Coumarin biosynthesis (via 2-coumarate) none Gossypium raimondii B456_006G057300 R-GRA-1123596-2 B456_006G057300 [plastid stroma] R-GRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119509 Histidine biosynthesis I none Gossypium raimondii B456_006G057400 R-GRA-9640664 B456_006G057400 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_006G061600 R-GRA-9826604-2 B456_006G061600 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_006G066300 R-GRA-1122242-9 B456_006G066300 [cytosol] R-GRA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119267 Phenylalanine degradation III none Gossypium raimondii B456_006G066400 R-GRA-1122242-5 B456_006G066400 [cytosol] R-GRA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119267 Phenylalanine degradation III none Gossypium raimondii B456_006G066700 R-GRA-9030976 B456_006G066700 [nucleoplasm] R-GRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654828 Strigolactone signaling none Gossypium raimondii B456_006G066700 R-GRA-9030976 B456_006G066700 [nucleoplasm] R-GRA-9030908 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030908 Underwater shoot and internode elongation none Gossypium raimondii B456_006G066700 R-GRA-9030976 B456_006G066700 [nucleoplasm] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_006G066700 R-GRA-9035631 B456_006G066700 [cytosol] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_006G066700 R-GRA-9030976 B456_006G066700 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_006G066700 R-GRA-9035631 B456_006G066700 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_006G066700 R-GRA-9608743 B456_006G066700 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_006G066700 R-GRA-9608705 B456_006G066700 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_006G067900 R-GRA-1129111 B456_006G067900 [cytosol] R-GRA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119349 S-methylmethionine cycle none Gossypium raimondii B456_006G067900 R-GRA-1129111 B456_006G067900 [cytosol] R-GRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119400 Methionine biosynthesis II none Gossypium raimondii B456_006G070400 R-GRA-9658563 B456_006G070400 [endoplasmic reticulum lumen] R-GRA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119502 Allantoin degradation none Gossypium raimondii B456_006G073300 R-GRA-1124939 B456_006G073300 [cytosol] R-GRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119540 Leucine biosynthesis none Gossypium raimondii B456_006G073400 R-GRA-1124939-2 B456_006G073400 [cytosol] R-GRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119540 Leucine biosynthesis none Gossypium raimondii B456_006G075100 R-GRA-1127695-2 B456_006G075100 [plastid stroma] R-GRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119430 Chorismate biosynthesis none Gossypium raimondii B456_006G077300 R-GRA-5632301 B456_006G077300 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_006G077300 R-GRA-5632301 B456_006G077300 [nucleoplasm] R-GRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654828 Strigolactone signaling none Gossypium raimondii B456_006G077300 R-GRA-5632301 B456_006G077300 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_006G081500 R-GRA-4752546-2 B456_006G081500 [plastid stroma] R-GRA-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119498 Phylloquinone biosynthesis none Gossypium raimondii B456_006G082100 R-GRA-1123482-3 B456_006G082100 [plastid stroma] R-GRA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119367 Polyisoprenoid biosynthesis none Gossypium raimondii B456_006G087200 R-GRA-1123433-4 B456_006G087200 [cytosol] R-GRA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119332 Jasmonic acid biosynthesis none Gossypium raimondii B456_006G087200 R-GRA-1123433-4 B456_006G087200 [cytosol] R-GRA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119618 13-LOX and 13-HPL pathway none Gossypium raimondii B456_006G089300 R-GRA-5632139 B456_006G089300 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_006G089400 R-GRA-5632139-2 B456_006G089400 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_006G091700 R-GRA-9626337-3 B456_006G091700 [Golgi-associated vesicle] R-GRA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9626305 Regulatory network of nutrient accumulation none Gossypium raimondii B456_006G091900 R-GRA-6788026-3 B456_006G091900 [cytosol] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_006G093700 R-GRA-1129438 B456_006G093700 [cytosol] R-GRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119438 Secologanin and strictosidine biosynthesis none Gossypium raimondii B456_006G094500 R-GRA-1126560-3 B456_006G094500 [cytosol] R-GRA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119516 Trehalose biosynthesis I none Gossypium raimondii B456_006G094700 R-GRA-1126560-4 B456_006G094700 [cytosol] R-GRA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119516 Trehalose biosynthesis I none Gossypium raimondii B456_006G102300 R-GRA-5632157-5 B456_006G102300 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_006G102300 R-GRA-5632157-5 B456_006G102300 [nucleoplasm] R-GRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654828 Strigolactone signaling none Gossypium raimondii B456_006G104900 R-GRA-1126828-2 B456_006G104900 [plastid] R-GRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119403 Removal of superoxide radicals none Gossypium raimondii B456_006G106100 R-GRA-1125804-2 B456_006G106100 [cytosol] R-GRA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119300 Glycolipid desaturation none Gossypium raimondii B456_006G107600 R-GRA-5138505 B456_006G107600 [plastid stroma] R-GRA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119263 Arginine biosynthesis none Gossypium raimondii B456_006G107600 R-GRA-5138505 B456_006G107600 [plastid stroma] R-GRA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119539 Ornithine biosynthesis none Gossypium raimondii B456_006G107600 R-GRA-5138505 B456_006G107600 [plastid stroma] R-GRA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119622 Arginine biosynthesis II (acetyl cycle) none Gossypium raimondii B456_006G108100 R-GRA-1124560-3 B456_006G108100 [cytosol] R-GRA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119563 UDP-D-xylose biosynthesis none Gossypium raimondii B456_006G108100 R-GRA-9681903-3 B456_006G108100 [Golgi lumen] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_006G108100 R-GRA-1124560-3 B456_006G108100 [cytosol] R-GRA-5654894 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654894 UDP-D-apiose biosynthesis none Gossypium raimondii B456_006G111600 R-GRA-9930216-3 ABI5 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_006G111800 R-GRA-6787863 B456_006G111800 [nucleoplasm] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_006G1125001 R-GRA-1127065 B456_006G1125001 [cytosol] R-GRA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119304 Putrescine biosynthesis II none Gossypium raimondii B456_006G114300 R-GRA-9640739-3 B456_006G114300 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_006G116600 R-GRA-5632111-2 B456_006G116600 [cytosol] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_006G116600 R-GRA-5632216-2 phospho-B456_006G116600 [cytosol] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_006G117300 R-GRA-9924558-2 NCED1 [plastid] R-GRA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Gossypium raimondii B456_006G117500 R-GRA-1126604 B456_006G117500 [cytosol] R-GRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119438 Secologanin and strictosidine biosynthesis none Gossypium raimondii B456_006G117800 R-GRA-9826669 OsYABBY6 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_006G118300 R-GRA-1250418 B456_006G118300 [cytosol] R-GRA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119374 Abscisic acid biosynthesis none Gossypium raimondii B456_006G118300 R-GRA-1129637 B456_006G118300 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_006G119500 R-GRA-1126883 B456_006G119500 [cytosol] R-GRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119389 Phenylalanine biosynthesis I none Gossypium raimondii B456_006G120500 R-GRA-9611863 B456_006G120500 [mitochondrial matrix] R-GRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119479 Valine degradation none Gossypium raimondii B456_006G121300 R-GRA-1126883-2 B456_006G121300 [cytosol] R-GRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119389 Phenylalanine biosynthesis I none Gossypium raimondii B456_006G121600 R-GRA-9927865-2 B456_006G121600 [nucleoplasm] R-GRA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934257 Transition from vegetative to reproductive shoot apical meristem none Gossypium raimondii B456_006G121900 R-GRA-9608678 B456_006G121900 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_006G121900 R-GRA-8986843 B456_006G121900 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_006G128800 R-GRA-9639088-2 B456_006G128800 [plasma membrane] R-GRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639136 Response to Aluminum stress none Gossypium raimondii B456_006G129200 R-GRA-1129600 B456_006G129200 [cytosol] R-GRA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119407 Ureide biosynthesis none Gossypium raimondii B456_006G130500 R-GRA-9675481-3 B456_006G130500 [cytosol] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_006G132200 R-GRA-1125447 B456_006G132200 [plastid stroma] R-GRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119509 Histidine biosynthesis I none Gossypium raimondii B456_006G134300 R-GRA-1129311 B456_006G134300 [cytosol] R-GRA-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Gossypium raimondii B456_006G138600 R-GRA-1130036-2 B456_006G138600 [endoplasmic reticulum membrane] R-GRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119402 Phospholipid biosynthesis I none Gossypium raimondii B456_006G143300 R-GRA-1129184 B456_006G143300 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_006G143300 R-GRA-1129184 B456_006G143300 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_006G143300 R-GRA-5606505 B456_006G143300 [plastid stroma] R-GRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119419 Lysine biosynthesis VI none Gossypium raimondii B456_006G144700 R-GRA-8986767 B456_006G144700 [plastid] R-GRA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8986768 Anther and pollen development none Gossypium raimondii B456_006G145500 R-GRA-1126892-2 B456_006G145500 [cytosol] R-GRA-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119353 Linear furanocoumarin biosynthesis none Gossypium raimondii B456_006G150700 R-GRA-9608693 B456_006G150700 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_006G152000 R-GRA-1129169-2 B456_006G152000 [plastid stroma] R-GRA-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119308 Momilactone biosynthesis none Gossypium raimondii B456_006G152100 R-GRA-1129169-3 B456_006G152100 [plastid stroma] R-GRA-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119308 Momilactone biosynthesis none Gossypium raimondii B456_006G152200 R-GRA-1129169 B456_006G152200 [plastid stroma] R-GRA-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119308 Momilactone biosynthesis none Gossypium raimondii B456_006G155600 R-GRA-9930216 ABI5 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_006G155800 R-GRA-9608694 B456_006G155800 [cytosol] R-GRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928831 Severe drought none Gossypium raimondii B456_006G155800 R-GRA-9928774 B456_006G155800 [nucleoplasm] R-GRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928831 Severe drought none Gossypium raimondii B456_006G159600 R-GRA-5655007 B456_006G159600 [Golgi lumen] R-GRA-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5655010 Xylogalacturonan biosynthesis none Gossypium raimondii B456_006G159700 R-GRA-1127031 B456_006G159700 [cytosol] R-GRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119460 Isoleucine biosynthesis from threonine none Gossypium raimondii B456_006G160600 R-GRA-1128678-2 B456_006G160600 [cytosol] R-GRA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119292 Cytokinins 7-N-glucoside biosynthesis none Gossypium raimondii B456_006G160600 R-GRA-1128678-2 B456_006G160600 [cytosol] R-GRA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119375 Cytokinins 9-N-glucoside biosynthesis none Gossypium raimondii B456_006G160600 R-GRA-1128678-2 B456_006G160600 [cytosol] R-GRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119473 Cytokinins-O-glucoside biosynthesis none Gossypium raimondii B456_006G163100 R-GRA-9640698 B456_006G163100 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_006G165900 R-GRA-1129851 B456_006G165900 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_006G165900 R-GRA-1129851 B456_006G165900 [mitochondrial matrix] R-GRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119540 Leucine biosynthesis none Gossypium raimondii B456_006G166000 R-GRA-1130235-5 B456_006G166000 [cytosol] R-GRA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119261 Salicylate biosynthesis none Gossypium raimondii B456_006G166000 R-GRA-1130235-5 B456_006G166000 [cytosol] R-GRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119418 Suberin biosynthesis none Gossypium raimondii B456_006G166000 R-GRA-1130235-5 B456_006G166000 [cytosol] R-GRA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119582 Phenylpropanoid biosynthesis, initial reactions none Gossypium raimondii B456_006G166400 R-GRA-5608161 B456_006G166400 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_006G166800 R-GRA-9618056-4 B456_006G166800 [plasma membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_006G168500 R-GRA-5654933 B456_006G168500 [Golgi lumen] R-GRA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654909 Xylan biosynthesis none Gossypium raimondii B456_006G175100 R-GRA-9658613 B456_006G175100 [plastid stroma] R-GRA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119263 Arginine biosynthesis none Gossypium raimondii B456_006G175100 R-GRA-9658613 B456_006G175100 [plastid stroma] R-GRA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119622 Arginine biosynthesis II (acetyl cycle) none Gossypium raimondii B456_006G180300 R-GRA-8986695-2 B456_006G180300 [endoplasmic reticulum membrane] R-GRA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8986768 Anther and pollen development none Gossypium raimondii B456_006G183300 R-GRA-1124145-2 B456_006G183300 [mitochondrial matrix] R-GRA-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119445 Beta-alanine biosynthesis II none Gossypium raimondii B456_006G183900 R-GRA-9025294 B456_006G183900 [cytosol] R-GRA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119267 Phenylalanine degradation III none Gossypium raimondii B456_006G183900 R-GRA-1124944 B456_006G183900 [plastid stroma] R-GRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119460 Isoleucine biosynthesis from threonine none Gossypium raimondii B456_006G183900 R-GRA-1127774 B456_006G183900 [cytosol] R-GRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119460 Isoleucine biosynthesis from threonine none Gossypium raimondii B456_006G183900 R-GRA-1124944 B456_006G183900 [plastid stroma] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_006G183900 R-GRA-1127774 B456_006G183900 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_006G183900 R-GRA-1124944 B456_006G183900 [plastid stroma] R-GRA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119502 Allantoin degradation none Gossypium raimondii B456_006G183900 R-GRA-1124944 B456_006G183900 [plastid stroma] R-GRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119600 Valine biosynthesis none Gossypium raimondii B456_006G183900 R-GRA-1127774 B456_006G183900 [cytosol] R-GRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119600 Valine biosynthesis none Gossypium raimondii B456_006G184000 R-GRA-9025294-2 B456_006G184000 [cytosol] R-GRA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119267 Phenylalanine degradation III none Gossypium raimondii B456_006G184000 R-GRA-1124944-2 B456_006G184000 [plastid stroma] R-GRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119460 Isoleucine biosynthesis from threonine none Gossypium raimondii B456_006G184000 R-GRA-1127774-2 B456_006G184000 [cytosol] R-GRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119460 Isoleucine biosynthesis from threonine none Gossypium raimondii B456_006G184000 R-GRA-1124944-2 B456_006G184000 [plastid stroma] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_006G184000 R-GRA-1127774-2 B456_006G184000 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_006G184000 R-GRA-1124944-2 B456_006G184000 [plastid stroma] R-GRA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119502 Allantoin degradation none Gossypium raimondii B456_006G184000 R-GRA-1124944-2 B456_006G184000 [plastid stroma] R-GRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119600 Valine biosynthesis none Gossypium raimondii B456_006G184000 R-GRA-1127774-2 B456_006G184000 [cytosol] R-GRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119600 Valine biosynthesis none Gossypium raimondii B456_006G186100 R-GRA-1123430-2 B456_006G186100 [cytosol] R-GRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119437 Glutathione redox reactions I none Gossypium raimondii B456_006G189200 R-GRA-1126916-2 B456_006G189200 [plastid stroma] R-GRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119464 Methylerythritol phosphate pathway none Gossypium raimondii B456_006G1895001 R-GRA-1126549-2 B456_006G1895001 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_006G190200 R-GRA-1122843 B456_006G190200 [cytosol] R-GRA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119458 Glutamate degradation none Gossypium raimondii B456_006G190500 R-GRA-5679470-4 B456_006G190500 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_006G191200 R-GRA-9658702 B456_006G191200 [plastid stroma] R-GRA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119297 Beta-alanine biosynthesis III none Gossypium raimondii B456_006G191800 R-GRA-1122656 B456_006G191800 [endosome] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_006G191800 R-GRA-5679312 B456_006G191800 [plasma membrane] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_006G193300 R-GRA-9640664-2 B456_006G193300 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_006G197200 R-GRA-9826696 B456_006G197200 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_006G201600 R-GRA-1128586 B456_006G201600 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_006G203200 R-GRA-9025699-2 B456_006G203200 [plasma membrane] R-GRA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8858053 Polar auxin transport none Gossypium raimondii B456_006G203200 R-GRA-9025699-2 B456_006G203200 [plasma membrane] R-GRA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9025727 Iron uptake and transport in root vascular system none Gossypium raimondii B456_006G205000 R-GRA-9918210-2 granule-bound starch synthase 1 (GBSSI, or Waxy) [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_006G205000 R-GRA-9918222-2 B456_006G205000 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_006G205000 R-GRA-9626344-2 B456_006G205000 [plastid stroma] R-GRA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9626305 Regulatory network of nutrient accumulation none Gossypium raimondii B456_006G207400 R-GRA-1122936-4 B456_006G207400 [cytosol] R-GRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119452 Galactose degradation II none Gossypium raimondii B456_006G210800 R-GRA-9639892-3 B456_006G210800 [cell wall] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_006G212600 R-GRA-1126888-3 B456_006G212600 [cytosol] R-GRA-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119360 Fructan biosynthesis none Gossypium raimondii B456_006G214500 R-GRA-1128380 B456_006G214500 [plastid stroma] R-GRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119430 Chorismate biosynthesis none Gossypium raimondii B456_006G216700 R-GRA-6787119-4 B456_006G216700 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_006G217000 R-GRA-9609569-2 B456_006G217000 [cytosol] R-GRA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9609573 Tricin biosynthesis none Gossypium raimondii B456_006G217500 R-GRA-9638999-3 B456_006G217500 [cytosol] R-GRA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119434 Phytic acid biosynthesis (lipid-independent) none Gossypium raimondii B456_006G218100 R-GRA-1129629 B456_006G218100 [plastid stroma] R-GRA-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119293 Glutamine biosynthesis I none Gossypium raimondii B456_006G218100 R-GRA-1129629 B456_006G218100 [plastid stroma] R-GRA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119443 Ammonia assimilation cycle none Gossypium raimondii B456_006G220600 R-GRA-1124613 B456_006G220600 [plasma membrane] R-GRA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119314 Cellulose biosynthesis none Gossypium raimondii B456_006G224100 R-GRA-1129438-4 B456_006G224100 [cytosol] R-GRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119438 Secologanin and strictosidine biosynthesis none Gossypium raimondii B456_006G224500 R-GRA-1129438-6 B456_006G224500 [cytosol] R-GRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119438 Secologanin and strictosidine biosynthesis none Gossypium raimondii B456_006G228200 R-GRA-9675297-2 B456_006G228200 [mitochondrion] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_006G229400 R-GRA-1125989 B456_006G229400 [cytosol] R-GRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119438 Secologanin and strictosidine biosynthesis none Gossypium raimondii B456_006G232200 R-GRA-1122545 B456_006G232200 [cytosol] R-GRA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119331 Cysteine biosynthesis I none Gossypium raimondii B456_006G233200 R-GRA-1127455-2 B456_006G233200 [cytosol] R-GRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119460 Isoleucine biosynthesis from threonine none Gossypium raimondii B456_006G233200 R-GRA-1127455-2 B456_006G233200 [cytosol] R-GRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119600 Valine biosynthesis none Gossypium raimondii B456_006G233600 R-GRA-1129539 B456_006G233600 [cytosol] R-GRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119610 Biotin biosynthesis II none Gossypium raimondii B456_006G236600 R-GRA-1122398 B456_006G236600 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_006G239100 R-GRA-1125584 B456_006G239100 [plastid stroma] R-GRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119509 Histidine biosynthesis I none Gossypium raimondii B456_006G239500 R-GRA-1126794-2 B456_006G239500 [cytosol] R-GRA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119331 Cysteine biosynthesis I none Gossypium raimondii B456_006G242400 R-GRA-9924379-2 HSFA2D [nucleoplasm] R-GRA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924451 Shoot (tiller) formation and regulation of tiller angle none Gossypium raimondii B456_006G243400 R-GRA-1128257-2 B456_006G243400 [plastid stroma] R-GRA-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119529 Sulfate activation for sulfonation none Gossypium raimondii B456_006G246000 R-GRA-1122892 B456_006G246000 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_006G246000 R-GRA-1122892 B456_006G246000 [nucleoplasm] R-GRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030557 Lateral root initiation none Gossypium raimondii B456_006G246000 R-GRA-1122892 B456_006G246000 [nucleoplasm] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_006G247800 R-GRA-5225766-3 B456_006G247800 [nucleoplasm] R-GRA-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5225756 Ethylene mediated signaling none Gossypium raimondii B456_006G250800 R-GRA-1124939-3 B456_006G250800 [cytosol] R-GRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119540 Leucine biosynthesis none Gossypium raimondii B456_006G250900 R-GRA-1128385-5 B456_006G250900 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_006G252000 R-GRA-5683263 B456_006G252000 [cytosol] R-GRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119586 Cyanate degradation none Gossypium raimondii B456_006G253100 R-GRA-5632268-7 B456_006G253100 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_006G253700 R-GRA-8933738-2 B456_006G253700 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_006G255000 R-GRA-9675439 B456_006G255000 [mitochondrial matrix] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_006G265300 R-GRA-1129507-2 B456_006G265300 [cytosol] R-GRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119452 Galactose degradation II none Gossypium raimondii B456_006G269200 R-GRA-5632199 B456_006G269200 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_006G274300 R-GRA-9826609-3 B456_006G274300 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_007G001600 R-GRA-1127502 B456_007G001600 [cytosol] R-GRA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119394 Pantothenate and coenzyme A biosynthesis III none Gossypium raimondii B456_007G001700 R-GRA-1126916 B456_007G001700 [plastid stroma] R-GRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119464 Methylerythritol phosphate pathway none Gossypium raimondii B456_007G002600 R-GRA-5679470-2 B456_007G002600 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_007G003800 R-GRA-1122656-3 B456_007G003800 [endosome] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_007G003800 R-GRA-5679312-3 B456_007G003800 [plasma membrane] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_007G010100 R-GRA-8879029 DREB1G [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_007G010100 R-GRA-8879085 B456_007G010100 [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_007G010100 R-GRA-8879050 CBF1 homolog [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_007G010200 R-GRA-9826696-4 B456_007G010200 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_007G012700 R-GRA-1123563-2 B456_007G012700 [cytosol] R-GRA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119379 Flavin biosynthesis none Gossypium raimondii B456_007G014600 R-GRA-9826647-4 B456_007G014600 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_007G017100 R-GRA-8933784-3 B456_007G017100 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_007G020500 R-GRA-1124788-2 B456_007G020500 [cytosol] R-GRA-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119601 Trehalose degradation II none Gossypium raimondii B456_007G022000 R-GRA-9639892-2 B456_007G022000 [cell wall] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_007G026900 R-GRA-9675365-5 B456_007G026900 [nucleoplasm] R-GRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675508 Root elongation none Gossypium raimondii B456_007G030400 R-GRA-8933728 B456_007G030400 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_007G030800 R-GRA-1130181-3 B456_007G030800 [plastid stroma] R-GRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119430 Chorismate biosynthesis none Gossypium raimondii B456_007G031100 R-GRA-8987554-2 B456_007G031100 [mitochondrial matrix] R-GRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119312 Photorespiration none Gossypium raimondii B456_007G033100 R-GRA-9638999-2 B456_007G033100 [cytosol] R-GRA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119434 Phytic acid biosynthesis (lipid-independent) none Gossypium raimondii B456_007G033500 R-GRA-1122783 B456_007G033500 [chloroplast stroma] R-GRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119402 Phospholipid biosynthesis I none Gossypium raimondii B456_007G034300 R-GRA-5632120-4 B456_007G034300 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_007G040100 R-GRA-5654755-2 B456_007G040100 [cytosol] R-GRA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119393 Asparagine degradation I none Gossypium raimondii B456_007G040600 R-GRA-5632199-2 B456_007G040600 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_007G041700 R-GRA-1125910-3 B456_007G041700 [plastid stroma] R-GRA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119367 Polyisoprenoid biosynthesis none Gossypium raimondii B456_007G041900 R-GRA-1122785-2 B456_007G041900 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_007G041900 R-GRA-1126726-2 B456_007G041900 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_007G041900 R-GRA-1122785-2 B456_007G041900 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_007G041900 R-GRA-1126726-2 B456_007G041900 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_007G041900 R-GRA-1122785-2 B456_007G041900 [cytosol] R-GRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119570 Cytosolic glycolysis none Gossypium raimondii B456_007G044900 R-GRA-5608102-3 B456_007G044900 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_007G044900 R-GRA-1123690 B456_007G044900 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_007G047400 R-GRA-1129514 B456_007G047400 [chloroplast] R-GRA-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119579 Glycine betaine biosynthesis III none Gossypium raimondii B456_007G049000 R-GRA-9618057 B456_007G049000 [cytosol] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_007G049600 R-GRA-1128613 B456_007G049600 [cytosol] R-GRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119316 Phenylpropanoid biosynthesis none Gossypium raimondii B456_007G050300 R-GRA-9916252-3 OsEGT1 [nucleoplasm] R-GRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9916190 Root angle formation: elongation and curvature response none Gossypium raimondii B456_007G051100 R-GRA-9826620-2 HOX12/ OsGT1 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_007G051100 R-GRA-9826620-2 HOX12/ OsGT1 [nucleoplasm] R-GRA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Gossypium raimondii B456_007G053000 R-GRA-4415007-2 B456_007G053000 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_007G053000 R-GRA-4415016-2 phospho-B456_007G053000 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_007G053000 R-GRA-4415007-2 B456_007G053000 [cytosol] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_007G056000 R-GRA-1123819-5 B456_007G056000 [plastid stroma] R-GRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119464 Methylerythritol phosphate pathway none Gossypium raimondii B456_007G057000 R-GRA-1123895 B456_007G057000 [cytosol] R-GRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119334 Ethylene biosynthesis from methionine none Gossypium raimondii B456_007G057000 R-GRA-1123895 B456_007G057000 [cytosol] R-GRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119624 Methionine salvage pathway none Gossypium raimondii B456_007G059300 R-GRA-9640777-4 B456_007G059300 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_007G059300 R-GRA-9640777-4 B456_007G059300 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_007G059900 R-GRA-9766892-2 SAPK1 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_007G063500 R-GRA-5633270-2 B456_007G063500 [cytosol] R-GRA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119495 Citrulline biosynthesis none Gossypium raimondii B456_007G065000 R-GRA-1122242-3 B456_007G065000 [cytosol] R-GRA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119267 Phenylalanine degradation III none Gossypium raimondii B456_007G065100 R-GRA-1122242-6 B456_007G065100 [cytosol] R-GRA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119267 Phenylalanine degradation III none Gossypium raimondii B456_007G067100 R-GRA-1126955-2 B456_007G067100 [plastid] R-GRA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119407 Ureide biosynthesis none Gossypium raimondii B456_007G070500 R-GRA-9639171-2 B456_007G070500 [plant-type vacuole membrane] R-GRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639136 Response to Aluminum stress none Gossypium raimondii B456_007G072400 R-GRA-5608218-2 B456_007G072400 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_007G072400 R-GRA-5608218-2 B456_007G072400 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_007G072400 R-GRA-9658968-2 B456_007G072400 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_007G072600 R-GRA-8879006 B456_007G072600 [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_007G074000 R-GRA-1122785-6 B456_007G074000 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_007G074000 R-GRA-1126726-6 B456_007G074000 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_007G074000 R-GRA-1122785-6 B456_007G074000 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_007G074000 R-GRA-1126726-6 B456_007G074000 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_007G074000 R-GRA-1122785-6 B456_007G074000 [cytosol] R-GRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119570 Cytosolic glycolysis none Gossypium raimondii B456_007G074200 R-GRA-5632129-4 B456_007G074200 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_007G078800 R-GRA-9618131 B456_007G078800 [plasma membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_007G079900 R-GRA-9766876 B456_007G079900 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_007G079900 R-GRA-9766876 B456_007G079900 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_007G080400 R-GRA-1126095 B456_007G080400 [cytosol] R-GRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119389 Phenylalanine biosynthesis I none Gossypium raimondii B456_007G080800 R-GRA-1126095-2 B456_007G080800 [cytosol] R-GRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119389 Phenylalanine biosynthesis I none Gossypium raimondii B456_007G081800 R-GRA-9681886-2 B456_007G081800 [cytosol] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_007G084900 R-GRA-8933728-8 B456_007G084900 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_007G087100 R-GRA-9826639-4 B456_007G087100 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_007G090400 R-GRA-1130247 B456_007G090400 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_007G090500 R-GRA-1126421-3 B456_007G090500 [cytosol] R-GRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119428 GDP-D-rhamnose biosynthesis none Gossypium raimondii B456_007G090500 R-GRA-1126421-3 B456_007G090500 [cytosol] R-GRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Gossypium raimondii B456_007G0971002 R-GRA-5146758 B456_007G0971002 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_007G097300 R-GRA-1125670 B456_007G097300 [cytosol] R-GRA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119393 Asparagine degradation I none Gossypium raimondii B456_007G100400 R-GRA-9640694 B456_007G100400 [nucleoplasm] R-GRA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640882 Assembly of pre-replication complex none Gossypium raimondii B456_007G100400 R-GRA-9640694 B456_007G100400 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_007G103200 R-GRA-1129892 B456_007G103200 [cytosol] R-GRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119334 Ethylene biosynthesis from methionine none Gossypium raimondii B456_007G103200 R-GRA-1129892 B456_007G103200 [cytosol] R-GRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119624 Methionine salvage pathway none Gossypium raimondii B456_007G106300 R-GRA-8933788-2 B456_007G106300 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_007G106500 R-GRA-6787202 B456_007G106500 [cytosol] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_007G106600 R-GRA-6787202-4 B456_007G106600 [cytosol] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_007G109300 R-GRA-6787066 B456_007G109300 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_007G109500 R-GRA-9675365 B456_007G109500 [nucleoplasm] R-GRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675508 Root elongation none Gossypium raimondii B456_007G113000 R-GRA-8933784 B456_007G113000 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_007G113900 R-GRA-8933759-3 B456_007G113900 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_007G116900 R-GRA-9612399-3 B456_007G116900 [peroxisomal matrix] R-GRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119612 Cysteine degradation none Gossypium raimondii B456_007G116900 R-GRA-9612380-2 B456_007G116900 [cytosol] R-GRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119612 Cysteine degradation none Gossypium raimondii B456_007G117700 R-GRA-1129914 B456_007G117700 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_007G118200 R-GRA-9826674-4 B456_007G118200 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_007G118900 R-GRA-9916298-2 OsEXPA3 [extracellular region] R-GRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9916190 Root angle formation: elongation and curvature response none Gossypium raimondii B456_007G119200 R-GRA-1128366-3 B456_007G119200 [cytosol] R-GRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119334 Ethylene biosynthesis from methionine none Gossypium raimondii B456_007G119200 R-GRA-1128366-3 B456_007G119200 [cytosol] R-GRA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119501 S-adenosyl-L-methionine cycle none Gossypium raimondii B456_007G119200 R-GRA-1128366-3 B456_007G119200 [cytosol] R-GRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119624 Methionine salvage pathway none Gossypium raimondii B456_007G119200 R-GRA-9025738-3 B456_007G119200 [cytosol] R-GRA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9025754 Mugineic acid biosynthesis none Gossypium raimondii B456_007G123000 R-GRA-9640745-2 B456_007G123000 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_007G123000 R-GRA-9640745-2 B456_007G123000 [nucleoplasm] R-GRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675824 DNA replication Initiation none Gossypium raimondii B456_007G128800 R-GRA-9639810 B456_007G128800 [cell wall] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_007G131300 R-GRA-5608164-4 B456_007G131300 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_007G131300 R-GRA-5608164-4 B456_007G131300 [nucleoplasm] R-GRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030557 Lateral root initiation none Gossypium raimondii B456_007G131300 R-GRA-5608164-4 B456_007G131300 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_007G131300 R-GRA-9658967-4 B456_007G131300 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_007G132700 R-GRA-5632341-2 B456_007G132700 [cytosol] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_007G132700 R-GRA-5632170-2 phospho-B456_007G132700 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_007G132800 R-GRA-5679398-4 B456_007G132800 [cytosol] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_007G134600 R-GRA-9918267 ISA2 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_007G137400 R-GRA-1128337 B456_007G137400 [plastid stroma] R-GRA-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119308 Momilactone biosynthesis none Gossypium raimondii B456_007G137400 R-GRA-1128244 B456_007G137400 [chloroplast] R-GRA-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119348 Ent-kaurene biosynthesis none Gossypium raimondii B456_007G139600 R-GRA-9924379-3 HSFA2D [nucleoplasm] R-GRA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924451 Shoot (tiller) formation and regulation of tiller angle none Gossypium raimondii B456_007G139800 R-GRA-8934084 B456_007G139800 [nucleoplasm] R-GRA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928995 Drought escape (DE) via ABA-dependent pathway none Gossypium raimondii B456_007G140400 R-GRA-3321270-3 B456_007G140400 [chloroplast inner membrane] R-GRA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119287 Vitamin E biosynthesis none Gossypium raimondii B456_007G141900 R-GRA-1122892-2 B456_007G141900 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_007G141900 R-GRA-1122892-2 B456_007G141900 [nucleoplasm] R-GRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030557 Lateral root initiation none Gossypium raimondii B456_007G141900 R-GRA-1122892-2 B456_007G141900 [nucleoplasm] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_007G142200 R-GRA-1127299 B456_007G142200 [cytosol] R-GRA-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119298 Glutathione redox reactions II none Gossypium raimondii B456_007G142200 R-GRA-1127299 B456_007G142200 [cytosol] R-GRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119437 Glutathione redox reactions I none Gossypium raimondii B456_007G143800 R-GRA-6787066-2 B456_007G143800 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_007G145600 R-GRA-1125910 B456_007G145600 [plastid stroma] R-GRA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119367 Polyisoprenoid biosynthesis none Gossypium raimondii B456_007G145700 R-GRA-6786994 B456_007G145700 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_007G150000 R-GRA-1128385-4 B456_007G150000 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_007G150100 R-GRA-5655057 B456_007G150100 [Golgi lumen] R-GRA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5655101 Xyloglucan biosynthesis none Gossypium raimondii B456_007G156000 R-GRA-9645907-3 B456_007G156000 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_007G156000 R-GRA-9645907-3 B456_007G156000 [nucleoplasm] R-GRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675824 DNA replication Initiation none Gossypium raimondii B456_007G161600 R-GRA-9639789-3 B456_007G161600 [plasma membrane] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_007G163700 R-GRA-1127443-4 B456_007G163700 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_007G163700 R-GRA-1122818-2 B456_007G163700 [cytosol] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_007G164400 R-GRA-5655007-5 B456_007G164400 [Golgi lumen] R-GRA-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5655010 Xylogalacturonan biosynthesis none Gossypium raimondii B456_007G165300 R-GRA-1123161 B456_007G165300 [chloroplast] R-GRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119494 Tryptophan biosynthesis none Gossypium raimondii B456_007G165600 R-GRA-1126998-2 B456_007G165600 [cytosol] R-GRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119615 Mevalonate pathway none Gossypium raimondii B456_007G166800 R-GRA-9916125-3 B456_007G166800 [nucleoplasm] R-GRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9916190 Root angle formation: elongation and curvature response none Gossypium raimondii B456_007G166800 R-GRA-9916231-3 B456_007G166800 [cytosol] R-GRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9916190 Root angle formation: elongation and curvature response none Gossypium raimondii B456_007G166800 R-GRA-9916199-3 phospho-B456_007G166800 [cytosol] R-GRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9916190 Root angle formation: elongation and curvature response none Gossypium raimondii B456_007G170000 R-GRA-8933714 B456_007G170000 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_007G170100 R-GRA-1122827-4 B456_007G170100 [cytosol] R-GRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119334 Ethylene biosynthesis from methionine none Gossypium raimondii B456_007G171300 R-GRA-9611549 phospho-phosphorylated-CERK1 [plasma membrane] R-GRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Gossypium raimondii B456_007G173200 R-GRA-1125187-2 B456_007G173200 [cytosol] R-GRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119276 Choline biosynthesis III none Gossypium raimondii B456_007G173800 R-GRA-9026148 B456_007G173800 [mitochondrion] R-GRA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119458 Glutamate degradation none Gossypium raimondii B456_007G173800 R-GRA-1130288 B456_007G173800 [cytosol] R-GRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119610 Biotin biosynthesis II none Gossypium raimondii B456_007G176700 R-GRA-9681910-4 B456_007G176700 [Golgi membrane] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_007G179400 R-GRA-1125540 B456_007G179400 [cytosol] R-GRA-1119303 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119303 Pyridoxamine anabolism none Gossypium raimondii B456_007G179400 R-GRA-1125540 B456_007G179400 [cytosol] R-GRA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119534 Pyridoxal 5'-phosphate salvage pathway none Gossypium raimondii B456_007G181300 R-GRA-8987531-3 B456_007G181300 [chloroplast] R-GRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119312 Photorespiration none Gossypium raimondii B456_007G181300 R-GRA-1125951-3 B456_007G181300 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_007G181400 R-GRA-8987531-2 B456_007G181400 [chloroplast] R-GRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119312 Photorespiration none Gossypium raimondii B456_007G181400 R-GRA-1125951-2 B456_007G181400 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_007G181800 R-GRA-1126531 B456_007G181800 [cytosol] R-GRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119410 Ascorbate biosynthesis none Gossypium raimondii B456_007G181800 R-GRA-1126531 B456_007G181800 [cytosol] R-GRA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119628 GDP-mannose metabolism none Gossypium raimondii B456_007G186600 R-GRA-1130416 B456_007G186600 [mitochondrial matrix] R-GRA-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119337 Proline degradation none Gossypium raimondii B456_007G186600 R-GRA-1130416 B456_007G186600 [mitochondrial matrix] R-GRA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119495 Citrulline biosynthesis none Gossypium raimondii B456_007G186800 R-GRA-1126400 B456_007G186800 [chloroplast] R-GRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119494 Tryptophan biosynthesis none Gossypium raimondii B456_007G187300 R-GRA-1127192-2 B456_007G187300 [cytosol] R-GRA-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119291 Nitrate assimilation none Gossypium raimondii B456_007G187300 R-GRA-1127192-2 B456_007G187300 [cytosol] R-GRA-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119293 Glutamine biosynthesis I none Gossypium raimondii B456_007G187300 R-GRA-1127192-2 B456_007G187300 [cytosol] R-GRA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119443 Ammonia assimilation cycle none Gossypium raimondii B456_007G188400 R-GRA-1126554-2 B456_007G188400 [cytosol] R-GRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119452 Galactose degradation II none Gossypium raimondii B456_007G191600 R-GRA-9618156 B456_007G191600 [plasma membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_007G192400 R-GRA-1126440 B456_007G192400 [plastid stroma] R-GRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119430 Chorismate biosynthesis none Gossypium raimondii B456_007G194700 R-GRA-2672431 B456_007G194700 [cytosol] R-GRA-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119322 Leucodelphinidin biosynthesis none Gossypium raimondii B456_007G194700 R-GRA-2672431 B456_007G194700 [cytosol] R-GRA-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Gossypium raimondii B456_007G194700 R-GRA-1124195 B456_007G194700 [cytosol] R-GRA-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119531 Flavonoid biosynthesis none Gossypium raimondii B456_007G196100 R-GRA-1129282 B456_007G196100 [cytosol] R-GRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119428 GDP-D-rhamnose biosynthesis none Gossypium raimondii B456_007G196100 R-GRA-1129282 B456_007G196100 [cytosol] R-GRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Gossypium raimondii B456_007G197700 R-GRA-1128613-4 B456_007G197700 [cytosol] R-GRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119316 Phenylpropanoid biosynthesis none Gossypium raimondii B456_007G200700 R-GRA-9639957-3 B456_007G200700 [plasma membrane] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_007G202800 R-GRA-1127815-2 B456_007G202800 [cytosol] R-GRA-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119450 Homocysteine biosynthesis none Gossypium raimondii B456_007G206000 R-GRA-9826620-3 HOX12/ OsGT1 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_007G206000 R-GRA-9826620-3 HOX12/ OsGT1 [nucleoplasm] R-GRA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Gossypium raimondii B456_007G210100 R-GRA-4415007 B456_007G210100 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_007G210100 R-GRA-4415016 phospho-B456_007G210100 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_007G210100 R-GRA-4415007 B456_007G210100 [cytosol] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_007G213500 R-GRA-4754219 B456_007G213500 [plastid stroma] R-GRA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119449 Carotenoid biosynthesis none Gossypium raimondii B456_007G214600 R-GRA-9645950 B456_007G214600 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_007G214600 R-GRA-9645950 B456_007G214600 [nucleoplasm] R-GRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675782 Maturation none Gossypium raimondii B456_007G214600 R-GRA-9645950 B456_007G214600 [nucleoplasm] R-GRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675815 Leading strand synthesis none Gossypium raimondii B456_007G214600 R-GRA-9645950 B456_007G214600 [nucleoplasm] R-GRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675824 DNA replication Initiation none Gossypium raimondii B456_007G214600 R-GRA-9645950 B456_007G214600 [nucleoplasm] R-GRA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675885 Lagging strand synthesis none Gossypium raimondii B456_007G219800 R-GRA-1123819-2 B456_007G219800 [plastid stroma] R-GRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119464 Methylerythritol phosphate pathway none Gossypium raimondii B456_007G222200 R-GRA-8933816-3 B456_007G222200 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_007G222500 R-GRA-8879027-4 B456_007G222500 [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_007G224300 R-GRA-9658611 B456_007G224300 [plastid stroma] R-GRA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119263 Arginine biosynthesis none Gossypium raimondii B456_007G224300 R-GRA-9658611 B456_007G224300 [plastid stroma] R-GRA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119539 Ornithine biosynthesis none Gossypium raimondii B456_007G224300 R-GRA-9658611 B456_007G224300 [plastid stroma] R-GRA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119622 Arginine biosynthesis II (acetyl cycle) none Gossypium raimondii B456_007G224800 R-GRA-5655075-3 B456_007G224800 [Golgi lumen] R-GRA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5655101 Xyloglucan biosynthesis none Gossypium raimondii B456_007G227400 R-GRA-1123895-2 B456_007G227400 [cytosol] R-GRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119334 Ethylene biosynthesis from methionine none Gossypium raimondii B456_007G227400 R-GRA-1123895-2 B456_007G227400 [cytosol] R-GRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119624 Methionine salvage pathway none Gossypium raimondii B456_007G227600 R-GRA-1123757 B456_007G227600 [cytosol] R-GRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119460 Isoleucine biosynthesis from threonine none Gossypium raimondii B456_007G227600 R-GRA-1123757 B456_007G227600 [cytosol] R-GRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119473 Cytokinins-O-glucoside biosynthesis none Gossypium raimondii B456_007G227600 R-GRA-1123757 B456_007G227600 [cytosol] R-GRA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119496 Pantothenate biosynthesis I none Gossypium raimondii B456_007G227600 R-GRA-1123757 B456_007G227600 [cytosol] R-GRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119540 Leucine biosynthesis none Gossypium raimondii B456_007G227600 R-GRA-1123757 B456_007G227600 [cytosol] R-GRA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119544 Pantothenate biosynthesis II none Gossypium raimondii B456_007G233600 R-GRA-9640777-2 B456_007G233600 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_007G233600 R-GRA-9640777-2 B456_007G233600 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_007G234800 R-GRA-9766892 SAPK1 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_007G2361001 R-GRA-1123596-3 B456_007G2361001 [plastid stroma] R-GRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119509 Histidine biosynthesis I none Gossypium raimondii B456_007G240800 R-GRA-1129082 B456_007G240800 [mitochondrial matrix] R-GRA-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119445 Beta-alanine biosynthesis II none Gossypium raimondii B456_007G241600 R-GRA-1129964 B456_007G241600 [cytosol] R-GRA-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119378 Myo-inositol biosynthesis none Gossypium raimondii B456_007G241600 R-GRA-1129964 B456_007G241600 [cytosol] R-GRA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119434 Phytic acid biosynthesis (lipid-independent) none Gossypium raimondii B456_007G241800 R-GRA-5654756 B456_007G241800 [cytosol] R-GRA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119281 Aspartate biosynthesis I none Gossypium raimondii B456_007G241800 R-GRA-1123648 B456_007G241800 [plastid] R-GRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119506 tyrosine degradation I none Gossypium raimondii B456_007G241800 R-GRA-5631992 B456_007G241800 [plastid stroma] R-GRA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119553 Asparagine biosynthesis none Gossypium raimondii B456_007G244300 R-GRA-4752546-5 B456_007G244300 [plastid stroma] R-GRA-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119498 Phylloquinone biosynthesis none Gossypium raimondii B456_007G244500 R-GRA-1130308 B456_007G244500 [plastid stroma] R-GRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119430 Chorismate biosynthesis none Gossypium raimondii B456_007G250600 R-GRA-1124095 B456_007G250600 [cytosol] R-GRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119452 Galactose degradation II none Gossypium raimondii B456_007G255400 R-GRA-9675838-2 B456_007G255400 [nucleoplasm] R-GRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675815 Leading strand synthesis none Gossypium raimondii B456_007G257500 R-GRA-1125151-3 B456_007G257500 [cytosol] R-GRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119400 Methionine biosynthesis II none Gossypium raimondii B456_007G257500 R-GRA-1125151-3 B456_007G257500 [cytosol] R-GRA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119501 S-adenosyl-L-methionine cycle none Gossypium raimondii B456_007G257600 R-GRA-1127467 B456_007G257600 [cytosol] R-GRA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119456 Brassinosteroid biosynthesis II none Gossypium raimondii B456_007G275600 R-GRA-5632268 B456_007G275600 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_007G276400 R-GRA-1128298-2 B456_007G276400 [cytosol] R-GRA-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119271 Threonine degradation none Gossypium raimondii B456_007G276400 R-GRA-1128298-2 B456_007G276400 [cytosol] R-GRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119610 Biotin biosynthesis II none Gossypium raimondii B456_007G276900 R-GRA-1122892-4 B456_007G276900 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_007G276900 R-GRA-1122892-4 B456_007G276900 [nucleoplasm] R-GRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030557 Lateral root initiation none Gossypium raimondii B456_007G276900 R-GRA-1122892-4 B456_007G276900 [nucleoplasm] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_007G279300 R-GRA-1125698 B456_007G279300 [cytosol] R-GRA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119436 Peptidoglycan biosynthesis I none Gossypium raimondii B456_007G279600 R-GRA-9035785-3 B456_007G279600 [nucleoplasm] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_007G279600 R-GRA-9035785-3 B456_007G279600 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_007G280100 R-GRA-5225766-2 B456_007G280100 [nucleoplasm] R-GRA-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5225756 Ethylene mediated signaling none Gossypium raimondii B456_007G283700 R-GRA-1127705-2 B456_007G283700 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_007G284900 R-GRA-1125038-2 B456_007G284900 [plastid stroma] R-GRA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119449 Carotenoid biosynthesis none Gossypium raimondii B456_007G289000 R-GRA-1123575 B456_007G289000 [cytosol] R-GRA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119297 Beta-alanine biosynthesis III none Gossypium raimondii B456_007G292800 R-GRA-8933842-2 B456_007G292800 [cytosol] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_007G292800 R-GRA-8933843-2 B456_007G292800 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_007G294800 R-GRA-9826680-3 B456_007G294800 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_007G295700 R-GRA-1127599-2 B456_007G295700 [cytosol] R-GRA-1119388 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119388 IAA biosynthesis VI (via indole-3-acetamide) none Gossypium raimondii B456_007G295900 R-GRA-1127599 B456_007G295900 [cytosol] R-GRA-1119388 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119388 IAA biosynthesis VI (via indole-3-acetamide) none Gossypium raimondii B456_007G296000 R-GRA-1127597-2 B456_007G296000 [cytosol] R-GRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119615 Mevalonate pathway none Gossypium raimondii B456_007G298500 R-GRA-9640783 B456_007G298500 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_007G299500 R-GRA-9607149 B456_007G299500 [plasma membrane] R-GRA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9607185 Generation of superoxide radicals none Gossypium raimondii B456_007G299500 R-GRA-9607094 phospho-B456_007G299500 [plasma membrane] R-GRA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9607185 Generation of superoxide radicals none Gossypium raimondii B456_007G299500 R-GRA-9607132 RBOHB [plasma membrane] R-GRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Gossypium raimondii B456_007G299500 R-GRA-9611529 phospho-phosphorylated-RBOHB [plasma membrane] R-GRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Gossypium raimondii B456_007G306400 R-GRA-9025712 B456_007G306400 [cytosol] R-GRA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9025754 Mugineic acid biosynthesis none Gossypium raimondii B456_007G306500 R-GRA-9826705 OSH71 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_007G309300 R-GRA-9612399 B456_007G309300 [peroxisomal matrix] R-GRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119612 Cysteine degradation none Gossypium raimondii B456_007G309300 R-GRA-9612380-3 B456_007G309300 [cytosol] R-GRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119612 Cysteine degradation none Gossypium raimondii B456_007G311800 R-GRA-9675426-2 B456_007G311800 [nucleoplasm] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_007G313700 R-GRA-9918175-5 B456_007G313700 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_007G327000 R-GRA-5632315-4 B456_007G327000 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_007G327000 R-GRA-5632284-4 phospho-B456_007G327000 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_007G327000 R-GRA-5632342-4 phospho-B456_007G327000 [cytosol] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_007G327000 R-GRA-5632315-4 B456_007G327000 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_007G332300 R-GRA-9930197 MPK8 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_007G336900 R-GRA-1125920-3 B456_007G336900 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_007G336900 R-GRA-1125920-3 B456_007G336900 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_007G342800 R-GRA-1127597 B456_007G342800 [cytosol] R-GRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119615 Mevalonate pathway none Gossypium raimondii B456_007G344300 R-GRA-1129438-2 B456_007G344300 [cytosol] R-GRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119438 Secologanin and strictosidine biosynthesis none Gossypium raimondii B456_007G345500 R-GRA-1128298-3 B456_007G345500 [cytosol] R-GRA-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119271 Threonine degradation none Gossypium raimondii B456_007G345500 R-GRA-1128298-3 B456_007G345500 [cytosol] R-GRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119610 Biotin biosynthesis II none Gossypium raimondii B456_007G346100 R-GRA-1125151-5 B456_007G346100 [cytosol] R-GRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119400 Methionine biosynthesis II none Gossypium raimondii B456_007G346100 R-GRA-1125151-5 B456_007G346100 [cytosol] R-GRA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119501 S-adenosyl-L-methionine cycle none Gossypium raimondii B456_007G346300 R-GRA-9924413 WOX6 [nucleoplasm] R-GRA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924451 Shoot (tiller) formation and regulation of tiller angle none Gossypium raimondii B456_007G347100 R-GRA-1129184-2 B456_007G347100 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_007G347100 R-GRA-1129184-2 B456_007G347100 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_007G347100 R-GRA-5606505-2 B456_007G347100 [plastid stroma] R-GRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119419 Lysine biosynthesis VI none Gossypium raimondii B456_007G352200 R-GRA-1126593 B456_007G352200 [endosome] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_007G352200 R-GRA-5679293 B456_007G352200 [plasma membrane] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_007G352200 R-GRA-8858098 B456_007G352200 [plasma membrane] R-GRA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8858053 Polar auxin transport none Gossypium raimondii B456_007G352600 R-GRA-6788172-3 B456_007G352600 [nucleoplasm] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_007G353500 R-GRA-1125261 B456_007G353500 R-GRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119400 Methionine biosynthesis II none Gossypium raimondii B456_007G353900 R-GRA-1129809 B456_007G353900 [mitochondrial inner membrane] R-GRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119410 Ascorbate biosynthesis none Gossypium raimondii B456_007G362000 R-GRA-9030976-2 B456_007G362000 [nucleoplasm] R-GRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654828 Strigolactone signaling none Gossypium raimondii B456_007G362000 R-GRA-9030976-2 B456_007G362000 [nucleoplasm] R-GRA-9030908 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030908 Underwater shoot and internode elongation none Gossypium raimondii B456_007G362000 R-GRA-9030976-2 B456_007G362000 [nucleoplasm] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_007G362000 R-GRA-9035631-2 B456_007G362000 [cytosol] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_007G362000 R-GRA-9030976-2 B456_007G362000 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_007G362000 R-GRA-9035631-2 B456_007G362000 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_007G362000 R-GRA-9608743-2 B456_007G362000 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_007G362000 R-GRA-9608705-2 B456_007G362000 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_007G362300 R-GRA-1124598-4 B456_007G362300 [cytosol] R-GRA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119300 Glycolipid desaturation none Gossypium raimondii B456_007G366600 R-GRA-9640739-2 B456_007G366600 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_007G368300 R-GRA-9646016 B456_007G368300 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_007G368300 R-GRA-9646016 B456_007G368300 [nucleoplasm] R-GRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675782 Maturation none Gossypium raimondii B456_007G368300 R-GRA-9646016 B456_007G368300 [nucleoplasm] R-GRA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675885 Lagging strand synthesis none Gossypium raimondii B456_007G372200 R-GRA-4754220 B456_007G372200 [plastid stroma] R-GRA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119449 Carotenoid biosynthesis none Gossypium raimondii B456_007G372200 R-GRA-1126847 B456_007G372200 [cytosol] R-GRA-1119492 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119492 Lactucaxanthin biosynthesis none Gossypium raimondii B456_007G373600 R-GRA-1130235-3 B456_007G373600 [cytosol] R-GRA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119261 Salicylate biosynthesis none Gossypium raimondii B456_007G373600 R-GRA-1130235-3 B456_007G373600 [cytosol] R-GRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119418 Suberin biosynthesis none Gossypium raimondii B456_007G373600 R-GRA-1130235-3 B456_007G373600 [cytosol] R-GRA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119582 Phenylpropanoid biosynthesis, initial reactions none Gossypium raimondii B456_007G373700 R-GRA-1130235 B456_007G373700 [cytosol] R-GRA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119261 Salicylate biosynthesis none Gossypium raimondii B456_007G373700 R-GRA-1130235 B456_007G373700 [cytosol] R-GRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119418 Suberin biosynthesis none Gossypium raimondii B456_007G373700 R-GRA-1130235 B456_007G373700 [cytosol] R-GRA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119582 Phenylpropanoid biosynthesis, initial reactions none Gossypium raimondii B456_007G375500 R-GRA-9640701 B456_007G375500 [nucleoplasm] R-GRA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640882 Assembly of pre-replication complex none Gossypium raimondii B456_007G375500 R-GRA-9640701 B456_007G375500 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_007G375800 R-GRA-9640723 B456_007G375800 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_007G377200 R-GRA-1127913-2 B456_007G377200 [cytosol] R-GRA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119495 Citrulline biosynthesis none Gossypium raimondii B456_007G377200 R-GRA-1127913-2 B456_007G377200 [cytosol] R-GRA-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119631 Proline biosynthesis I none Gossypium raimondii B456_007G377800 R-GRA-1127082 B456_007G377800 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_007G378700 R-GRA-9916309 CPK3 [plasma membrane] R-GRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9916190 Root angle formation: elongation and curvature response none Gossypium raimondii B456_008G002200 R-GRA-8934084-2 B456_008G002200 [nucleoplasm] R-GRA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928995 Drought escape (DE) via ABA-dependent pathway none Gossypium raimondii B456_008G007200 R-GRA-5679398-2 B456_008G007200 [cytosol] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_008G008400 R-GRA-8934069 B456_008G008400 [nucleoplasm] R-GRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934036 Long day regulated expression of florigens none Gossypium raimondii B456_008G008400 R-GRA-8934069 B456_008G008400 [nucleoplasm] R-GRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934108 Short day regulated expression of florigens none Gossypium raimondii B456_008G013000 R-GRA-1124496-2 B456_008G013000 [cytosol] R-GRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119615 Mevalonate pathway none Gossypium raimondii B456_008G013700 R-GRA-5221147-4 B456_008G013700 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_008G014600 R-GRA-1126488 B456_008G014600 [mitochondrial inner membrane] R-GRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119402 Phospholipid biosynthesis I none Gossypium raimondii B456_008G017500 R-GRA-1123575-3 B456_008G017500 [cytosol] R-GRA-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119297 Beta-alanine biosynthesis III none Gossypium raimondii B456_008G017700 R-GRA-3230566 B456_008G017700 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_008G019000 R-GRA-1128745 B456_008G019000 [plastid stroma] R-GRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119464 Methylerythritol phosphate pathway none Gossypium raimondii B456_008G020700 R-GRA-8879027-3 B456_008G020700 [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_008G022800 R-GRA-1125967-2 B456_008G022800 [cytosol] R-GRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119316 Phenylpropanoid biosynthesis none Gossypium raimondii B456_008G024100 R-GRA-9920344 B456_008G024100 [nucleoplasm] R-GRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934108 Short day regulated expression of florigens none Gossypium raimondii B456_008G024700 R-GRA-9928801-6 B456_008G024700 [nucleoplasm] R-GRA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928995 Drought escape (DE) via ABA-dependent pathway none Gossypium raimondii B456_008G025000 R-GRA-9025430 B456_008G025000 [endoplasmic reticulum membrane] R-GRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119325 Sphingolipid metabolism none Gossypium raimondii B456_008G029200 R-GRA-1127815 B456_008G029200 [cytosol] R-GRA-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119450 Homocysteine biosynthesis none Gossypium raimondii B456_008G030100 R-GRA-1127738-2 B456_008G030100 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_008G030100 R-GRA-1127738-2 B456_008G030100 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_008G030100 R-GRA-5606514-2 B456_008G030100 [plastid stroma] R-GRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119419 Lysine biosynthesis VI none Gossypium raimondii B456_008G040100 R-GRA-5632232-2 phospho-B456_008G040100 [plasma membrane] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_008G040900 R-GRA-1130141-3 B456_008G040900 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_008G040900 R-GRA-1130141-3 B456_008G040900 [mitochondrial matrix] R-GRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119540 Leucine biosynthesis none Gossypium raimondii B456_008G042900 R-GRA-9682527 B456_008G042900 [cytosol] R-GRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119410 Ascorbate biosynthesis none Gossypium raimondii B456_008G044900 R-GRA-1128263 B456_008G044900 [plastid stroma] R-GRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119509 Histidine biosynthesis I none Gossypium raimondii B456_008G047200 R-GRA-9618186-2 B456_008G047200 [plant-type vacuole membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_008G047300 R-GRA-9618186 B456_008G047300 [plant-type vacuole membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_008G047400 R-GRA-9618186-5 B456_008G047400 [plant-type vacuole membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_008G047500 R-GRA-9618186-3 B456_008G047500 [plant-type vacuole membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_008G048100 R-GRA-8987505 B456_008G048100 [mitochondrial matrix] R-GRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119312 Photorespiration none Gossypium raimondii B456_008G049300 R-GRA-9675357 B456_008G049300 [nucleoplasm] R-GRA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030680 Crown root development none Gossypium raimondii B456_008G050700 R-GRA-9658573 B456_008G050700 [endoplasmic reticulum lumen] R-GRA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119502 Allantoin degradation none Gossypium raimondii B456_008G054600 R-GRA-5608169-2 B456_008G054600 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_008G055300 R-GRA-1126531-2 B456_008G055300 [cytosol] R-GRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119410 Ascorbate biosynthesis none Gossypium raimondii B456_008G055300 R-GRA-1126531-2 B456_008G055300 [cytosol] R-GRA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119628 GDP-mannose metabolism none Gossypium raimondii B456_008G056100 R-GRA-2730728 B456_008G056100 [cytosol] R-GRA-1119413 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119413 Trans-zeatin biosynthesis none Gossypium raimondii B456_008G058200 R-GRA-9618186-4 B456_008G058200 [plant-type vacuole membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_008G059900 R-GRA-8934168-2 B456_008G059900 [nucleoplasm] R-GRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934036 Long day regulated expression of florigens none Gossypium raimondii B456_008G059900 R-GRA-8934168-2 B456_008G059900 [nucleoplasm] R-GRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934108 Short day regulated expression of florigens none Gossypium raimondii B456_008G059900 R-GRA-9920270-2 B456_008G059900 [nucleoplasm] R-GRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934108 Short day regulated expression of florigens none Gossypium raimondii B456_008G059900 R-GRA-8934168-2 B456_008G059900 [nucleoplasm] R-GRA-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928946 Drought escape (DE) via ABA-independent pathway none Gossypium raimondii B456_008G061000 R-GRA-1130141-2 B456_008G061000 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_008G061000 R-GRA-1130141-2 B456_008G061000 [mitochondrial matrix] R-GRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119540 Leucine biosynthesis none Gossypium raimondii B456_008G061100 R-GRA-1127087-3 B456_008G061100 [cytosol] R-GRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119438 Secologanin and strictosidine biosynthesis none Gossypium raimondii B456_008G061600 R-GRA-1129187-4 B456_008G061600 [cytosol] R-GRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119276 Choline biosynthesis III none Gossypium raimondii B456_008G061900 R-GRA-1130136 B456_008G061900 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_008G061900 R-GRA-1130136 B456_008G061900 [mitochondrial matrix] R-GRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119540 Leucine biosynthesis none Gossypium raimondii B456_008G062200 R-GRA-1126440-2 B456_008G062200 [plastid stroma] R-GRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119430 Chorismate biosynthesis none Gossypium raimondii B456_008G062900 R-GRA-2672431-2 B456_008G062900 [cytosol] R-GRA-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119322 Leucodelphinidin biosynthesis none Gossypium raimondii B456_008G062900 R-GRA-2672431-2 B456_008G062900 [cytosol] R-GRA-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Gossypium raimondii B456_008G062900 R-GRA-1124195-2 B456_008G062900 [cytosol] R-GRA-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119531 Flavonoid biosynthesis none Gossypium raimondii B456_008G067100 R-GRA-1123717-2 B456_008G067100 [cytosol] R-GRA-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119395 Maackiain biosynthesis none Gossypium raimondii B456_008G067100 R-GRA-1123717-2 B456_008G067100 [cytosol] R-GRA-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119453 Medicarpin biosynthesis none Gossypium raimondii B456_008G067400 R-GRA-9916252 OsEGT1 [nucleoplasm] R-GRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9916190 Root angle formation: elongation and curvature response none Gossypium raimondii B456_008G068200 R-GRA-1129247 B456_008G068200 [mitochondrial inner membrane] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_008G073200 R-GRA-4415007-4 B456_008G073200 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_008G073200 R-GRA-4415016-4 phospho-B456_008G073200 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_008G073200 R-GRA-4415007-4 B456_008G073200 [cytosol] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_008G077900 R-GRA-8879009-5 B456_008G077900 [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_008G078400 R-GRA-9640671-4 B456_008G078400 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_008G078400 R-GRA-9640671-4 B456_008G078400 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_008G082500 R-GRA-8879027 B456_008G082500 [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_008G0841002 R-GRA-5655075 B456_008G0841002 [Golgi lumen] R-GRA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5655101 Xyloglucan biosynthesis none Gossypium raimondii B456_008G087200 R-GRA-5083827-2 B456_008G087200 [mitochondrial matrix] R-GRA-1119319 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119319 Alanine biosynthesis III none Gossypium raimondii B456_008G087200 R-GRA-5083827-2 B456_008G087200 [mitochondrial matrix] R-GRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119612 Cysteine degradation none Gossypium raimondii B456_008G088200 R-GRA-1123596 B456_008G088200 [plastid stroma] R-GRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119509 Histidine biosynthesis I none Gossypium raimondii B456_008G092100 R-GRA-9640777 B456_008G092100 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_008G092100 R-GRA-9640777 B456_008G092100 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_008G095900 R-GRA-9681886-6 B456_008G095900 [cytosol] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_008G096300 R-GRA-1122351 B456_008G096300 [cytosol] R-GRA-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119354 Asparagine biosynthesis III none Gossypium raimondii B456_008G096300 R-GRA-5633281 B456_008G096300 [cytosol] R-GRA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119495 Citrulline biosynthesis none Gossypium raimondii B456_008G096300 R-GRA-1122351 B456_008G096300 [cytosol] R-GRA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119553 Asparagine biosynthesis none Gossypium raimondii B456_008G097200 R-GRA-5608154 B456_008G097200 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_008G098400 R-GRA-9626474 B456_008G098400 [trans-Golgi network membrane] R-GRA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9626305 Regulatory network of nutrient accumulation none Gossypium raimondii B456_008G099500 R-GRA-5654840-2 B456_008G099500 [nucleoplasm] R-GRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654828 Strigolactone signaling none Gossypium raimondii B456_008G099500 R-GRA-5654840-2 B456_008G099500 [nucleoplasm] R-GRA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Gossypium raimondii B456_008G104300 R-GRA-1123096 B456_008G104300 [mitochondrial inner membrane] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_008G106700 R-GRA-9924407-2 EXPB5 [basolateral plasma membrane] R-GRA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924451 Shoot (tiller) formation and regulation of tiller angle none Gossypium raimondii B456_008G107600 R-GRA-5367777 B456_008G107600 [plastid stroma] R-GRA-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5367729 Strigolactone biosynthesis none Gossypium raimondii B456_008G107700 R-GRA-9826639 B456_008G107700 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_008G110700 R-GRA-8933728-7 B456_008G110700 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_008G113400 R-GRA-1130247-2 B456_008G113400 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_008G113500 R-GRA-1130247-4 B456_008G113500 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_008G113800 R-GRA-1128197-2 B456_008G113800 [plastid stroma] R-GRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119430 Chorismate biosynthesis none Gossypium raimondii B456_008G114500 R-GRA-1126602 B456_008G114500 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_008G114500 R-GRA-1126602 B456_008G114500 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_008G114500 R-GRA-5606494 B456_008G114500 [plastid stroma] R-GRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119419 Lysine biosynthesis VI none Gossypium raimondii B456_008G117900 R-GRA-1125556-2 B456_008G117900 [cytosol] R-GRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119410 Ascorbate biosynthesis none Gossypium raimondii B456_008G117900 R-GRA-1125556-2 B456_008G117900 [cytosol] R-GRA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119628 GDP-mannose metabolism none Gossypium raimondii B456_008G119600 R-GRA-1129892-2 B456_008G119600 [cytosol] R-GRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119334 Ethylene biosynthesis from methionine none Gossypium raimondii B456_008G119600 R-GRA-1129892-2 B456_008G119600 [cytosol] R-GRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119624 Methionine salvage pathway none Gossypium raimondii B456_008G126200 R-GRA-9675365-4 B456_008G126200 [nucleoplasm] R-GRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675508 Root elongation none Gossypium raimondii B456_008G131800 R-GRA-8933759 B456_008G131800 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_008G132000 R-GRA-8933759-2 B456_008G132000 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_008G133700 R-GRA-9826674-3 B456_008G133700 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_008G134000 R-GRA-1129914-3 B456_008G134000 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_008G135900 R-GRA-1128366 B456_008G135900 [cytosol] R-GRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119334 Ethylene biosynthesis from methionine none Gossypium raimondii B456_008G135900 R-GRA-1128366 B456_008G135900 [cytosol] R-GRA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119501 S-adenosyl-L-methionine cycle none Gossypium raimondii B456_008G135900 R-GRA-1128366 B456_008G135900 [cytosol] R-GRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119624 Methionine salvage pathway none Gossypium raimondii B456_008G135900 R-GRA-9025738 B456_008G135900 [cytosol] R-GRA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9025754 Mugineic acid biosynthesis none Gossypium raimondii B456_008G140900 R-GRA-9645891 B456_008G140900 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_008G147800 R-GRA-8933787-3 B456_008G147800 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_008G148100 R-GRA-9826597-3 B456_008G148100 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_008G149600 R-GRA-1125612-2 B456_008G149600 [cytosol] R-GRA-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119353 Linear furanocoumarin biosynthesis none Gossypium raimondii B456_008G153000 R-GRA-1125612 B456_008G153000 [cytosol] R-GRA-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119353 Linear furanocoumarin biosynthesis none Gossypium raimondii B456_008G157600 R-GRA-9025372 B456_008G157600 [endoplasmic reticulum membrane] R-GRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119402 Phospholipid biosynthesis I none Gossypium raimondii B456_008G166200 R-GRA-1126320-3 B456_008G166200 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_008G168900 R-GRA-5679402-3 B456_008G168900 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_008G169000 R-GRA-5679402-2 B456_008G169000 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_008G169500 R-GRA-5679470-5 B456_008G169500 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_008G169900 R-GRA-1128637 B456_008G169900 [chloroplast] R-GRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119494 Tryptophan biosynthesis none Gossypium raimondii B456_008G170900 R-GRA-1125504-2 B456_008G170900 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_008G170900 R-GRA-1125504-2 B456_008G170900 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_008G170900 R-GRA-1125504-2 B456_008G170900 [cytosol] R-GRA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119295 Homoserine biosynthesis none Gossypium raimondii B456_008G170900 R-GRA-5606489-2 B456_008G170900 [plastid stroma] R-GRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119419 Lysine biosynthesis VI none Gossypium raimondii B456_008G171600 R-GRA-1127523-4 B456_008G171600 [cytosol] R-GRA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Gossypium raimondii B456_008G173900 R-GRA-1129438-3 B456_008G173900 [cytosol] R-GRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119438 Secologanin and strictosidine biosynthesis none Gossypium raimondii B456_008G176100 R-GRA-1129585 B456_008G176100 [cytosol] R-GRA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119265 Tetrahydrofolate biosynthesis I none Gossypium raimondii B456_008G176100 R-GRA-1129585 B456_008G176100 [cytosol] R-GRA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119523 Tetrahydrofolate biosynthesis II none Gossypium raimondii B456_008G176700 R-GRA-6787262 B456_008G176700 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_008G177900 R-GRA-9681886-5 B456_008G177900 [cytosol] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_008G179900 R-GRA-9636827-2 B456_008G179900 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_008G181300 R-GRA-9025463-4 B456_008G181300 [endoplasmic reticulum membrane] R-GRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119325 Sphingolipid metabolism none Gossypium raimondii B456_008G182700 R-GRA-4752546-8 B456_008G182700 [plastid stroma] R-GRA-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119498 Phylloquinone biosynthesis none Gossypium raimondii B456_008G185900 R-GRA-9826681-3 EREBP129 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_008G189700 R-GRA-5632120-5 B456_008G189700 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_008G190900 R-GRA-6787276-2 B456_008G190900 [plastid stroma] R-GRA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119261 Salicylate biosynthesis none Gossypium raimondii B456_008G190900 R-GRA-6787950-2 B456_008G190900 [nucleoplasm] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_008G194500 R-GRA-1122934 B456_008G194500 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_008G195000 R-GRA-5655070 B456_008G195000 [Golgi lumen] R-GRA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5655101 Xyloglucan biosynthesis none Gossypium raimondii B456_008G198200 R-GRA-1128178 B456_008G198200 [cytosol] R-GRA-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119322 Leucodelphinidin biosynthesis none Gossypium raimondii B456_008G198200 R-GRA-1128178 B456_008G198200 [cytosol] R-GRA-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Gossypium raimondii B456_008G198200 R-GRA-9609575 B456_008G198200 [endoplasmic reticulum membrane] R-GRA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9609573 Tricin biosynthesis none Gossypium raimondii B456_008G199500 R-GRA-6787141 B456_008G199500 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_008G199700 R-GRA-9826682 B456_008G199700 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_008G200400 R-GRA-5654755 B456_008G200400 [cytosol] R-GRA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119393 Asparagine degradation I none Gossypium raimondii B456_008G202400 R-GRA-1126395-2 B456_008G202400 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_008G209600 R-GRA-9025471 B456_008G209600 [endoplasmic reticulum membrane] R-GRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119325 Sphingolipid metabolism none Gossypium raimondii B456_008G209600 R-GRA-1127934 B456_008G209600 [cytosol] R-GRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119610 Biotin biosynthesis II none Gossypium raimondii B456_008G210200 R-GRA-5608102-2 B456_008G210200 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_008G210200 R-GRA-1123690-2 B456_008G210200 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_008G210600 R-GRA-9930242 B456_008G210600 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_008G214800 R-GRA-9025447 B456_008G214800 [cytosol] R-GRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119325 Sphingolipid metabolism none Gossypium raimondii B456_008G214900 R-GRA-1128812 B456_008G214900 [cytosol] R-GRA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119393 Asparagine degradation I none Gossypium raimondii B456_008G215800 R-GRA-5633332 B456_008G215800 [plastid stroma] R-GRA-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5633340 Citrulline-nitric oxide cycle none Gossypium raimondii B456_008G216700 R-GRA-1125569-2 B456_008G216700 [cytosol] R-GRA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119516 Trehalose biosynthesis I none Gossypium raimondii B456_008G216800 R-GRA-1126888-2 B456_008G216800 [cytosol] R-GRA-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119360 Fructan biosynthesis none Gossypium raimondii B456_008G217600 R-GRA-6788036 B456_008G217600 [cytosol] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_008G217600 R-GRA-1126611 B456_008G217600 [nucleoplasm] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_008G218900 R-GRA-1128857-2 B456_008G218900 [cytosol] R-GRA-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119609 Phaseic acid biosynthesis none Gossypium raimondii B456_008G219800 R-GRA-9924558 NCED1 [plastid] R-GRA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Gossypium raimondii B456_008G222400 R-GRA-5149678 B456_008G222400 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_008G224300 R-GRA-1127989 B456_008G224300 [plastid stroma] R-GRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119430 Chorismate biosynthesis none Gossypium raimondii B456_008G226000 R-GRA-1127523-5 B456_008G226000 [cytosol] R-GRA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Gossypium raimondii B456_008G226300 R-GRA-6787119 B456_008G226300 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_008G229800 R-GRA-1130181-2 B456_008G229800 [plastid stroma] R-GRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119430 Chorismate biosynthesis none Gossypium raimondii B456_008G230400 R-GRA-8933728-2 B456_008G230400 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_008G230800 R-GRA-9658589 B456_008G230800 [endoplasmic reticulum lumen] R-GRA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119502 Allantoin degradation none Gossypium raimondii B456_008G232000 R-GRA-1126053-2 B456_008G232000 [mitochondrial matrix] R-GRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119479 Valine degradation none Gossypium raimondii B456_008G232200 R-GRA-1126053 B456_008G232200 [mitochondrial matrix] R-GRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119479 Valine degradation none Gossypium raimondii B456_008G236700 R-GRA-1126888-4 B456_008G236700 [cytosol] R-GRA-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119360 Fructan biosynthesis none Gossypium raimondii B456_008G242100 R-GRA-1130078-2 B456_008G242100 [cytosol] R-GRA-1119440 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119440 Anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside) none Gossypium raimondii B456_008G242100 R-GRA-2672102-2 B456_008G242100 [cytosol] R-GRA-1119514 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119514 Anthocyanin biosynthesis (delphinidin 3-O-glucoside) none Gossypium raimondii B456_008G243100 R-GRA-1128328 B456_008G243100 [cytosol] R-GRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119615 Mevalonate pathway none Gossypium raimondii B456_008G243600 R-GRA-8879029-2 DREB1G [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_008G243600 R-GRA-8879085-2 B456_008G243600 [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_008G243700 R-GRA-9826696-5 B456_008G243700 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_008G243900 R-GRA-5632261 B456_008G243900 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_008G244600 R-GRA-1130394 B456_008G244600 [cytosol] R-GRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119452 Galactose degradation II none Gossypium raimondii B456_008G246400 R-GRA-1126615-2 B456_008G246400 [cytosol] R-GRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119437 Glutathione redox reactions I none Gossypium raimondii B456_008G246600 R-GRA-1126615 B456_008G246600 [cytosol] R-GRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119437 Glutathione redox reactions I none Gossypium raimondii B456_008G247200 R-GRA-1122593-2 B456_008G247200 [cytosol] R-GRA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119436 Peptidoglycan biosynthesis I none Gossypium raimondii B456_008G247200 R-GRA-1122593-2 B456_008G247200 [cytosol] R-GRA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119523 Tetrahydrofolate biosynthesis II none Gossypium raimondii B456_008G247200 R-GRA-1122593-2 B456_008G247200 [cytosol] R-GRA-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119617 Folate polyglutamylation I none Gossypium raimondii B456_008G249800 R-GRA-6788007 B456_008G249800 [cytosol] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_008G250500 R-GRA-9607105 B456_008G250500 [mitochondrion] R-GRA-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9607185 Generation of superoxide radicals none Gossypium raimondii B456_008G252100 R-GRA-5654816-2 B456_008G252100 [nucleoplasm] R-GRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654828 Strigolactone signaling none Gossypium raimondii B456_008G252200 R-GRA-5654816 B456_008G252200 [nucleoplasm] R-GRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654828 Strigolactone signaling none Gossypium raimondii B456_008G252600 R-GRA-8933788 B456_008G252600 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_008G253300 R-GRA-9826647-2 B456_008G253300 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_008G260100 R-GRA-9918210 granule-bound starch synthase 1 (GBSSI, or Waxy) [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_008G260100 R-GRA-9918222 B456_008G260100 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_008G260100 R-GRA-9626344 B456_008G260100 [plastid stroma] R-GRA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9626305 Regulatory network of nutrient accumulation none Gossypium raimondii B456_008G265100 R-GRA-8933784-4 B456_008G265100 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_008G269600 R-GRA-1129859 B456_008G269600 [chloroplast stroma] R-GRA-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119443 Ammonia assimilation cycle none Gossypium raimondii B456_008G269600 R-GRA-5606382 B456_008G269600 [plastid stroma] R-GRA-1119535 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119535 Glutamate biosynthesis IV none Gossypium raimondii B456_008G269900 R-GRA-1123059-2 B456_008G269900 [cytosol] R-GRA-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119317 Spermine biosynthesis none Gossypium raimondii B456_008G269900 R-GRA-1123059-2 B456_008G269900 [cytosol] R-GRA-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119343 Spermidine biosynthesis none Gossypium raimondii B456_008G270600 R-GRA-9826647 B456_008G270600 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_008G274900 R-GRA-1130308-2 B456_008G274900 [plastid stroma] R-GRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119430 Chorismate biosynthesis none Gossypium raimondii B456_008G280600 R-GRA-8879029-5 DREB1G [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_008G280600 R-GRA-8879085-5 B456_008G280600 [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_008G282000 R-GRA-1124757 B456_008G282000 [cytosol] R-GRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119465 Sucrose biosynthesis none Gossypium raimondii B456_008G282000 R-GRA-1124757 B456_008G282000 [cytosol] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_008G289900 R-GRA-8854127 B456_008G289900 [cytosol] R-GRA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119556 Choline biosynthesis I none Gossypium raimondii B456_008G290000 R-GRA-1122656-2 B456_008G290000 [endosome] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_008G290000 R-GRA-5679312-2 B456_008G290000 [plasma membrane] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_008G293000 R-GRA-5679470-8 B456_008G293000 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_008G293200 R-GRA-1122843-2 B456_008G293200 [cytosol] R-GRA-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119458 Glutamate degradation none Gossypium raimondii B456_008G294300 R-GRA-1128334 B456_008G294300 [mitochondrial matrix] R-GRA-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119337 Proline degradation none Gossypium raimondii B456_008G295000 R-GRA-1130327-2 B456_008G295000 [cytosol] R-GRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119586 Cyanate degradation none Gossypium raimondii B456_008G295100 R-GRA-1130327-4 B456_008G295100 [cytosol] R-GRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119586 Cyanate degradation none Gossypium raimondii B456_008G295400 R-GRA-1127502-2 B456_008G295400 [cytosol] R-GRA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119394 Pantothenate and coenzyme A biosynthesis III none Gossypium raimondii B456_008G296400 R-GRA-1126238 B456_008G296400 [chloroplast] R-GRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119494 Tryptophan biosynthesis none Gossypium raimondii B456_009G001000 R-GRA-9611864 B456_009G001000 [mitochondrial matrix] R-GRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119479 Valine degradation none Gossypium raimondii B456_009G001600 R-GRA-8858085 B456_009G001600 [plasma membrane] R-GRA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8858053 Polar auxin transport none Gossypium raimondii B456_009G001600 R-GRA-8858085 B456_009G001600 [plasma membrane] R-GRA-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924494 Gravity sensing and statolith sedimentation none Gossypium raimondii B456_009G001600 R-GRA-9928298 PIN2 [endosome] R-GRA-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924494 Gravity sensing and statolith sedimentation none Gossypium raimondii B456_009G001900 R-GRA-1126513 B456_009G001900 [cytosol] R-GRA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119332 Jasmonic acid biosynthesis none Gossypium raimondii B456_009G004100 R-GRA-9645866 B456_009G004100 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_009G004100 R-GRA-9645866 B456_009G004100 [nucleoplasm] R-GRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675824 DNA replication Initiation none Gossypium raimondii B456_009G004900 R-GRA-9920292 B456_009G004900 [nucleoplasm] R-GRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934108 Short day regulated expression of florigens none Gossypium raimondii B456_009G005000 R-GRA-9645872 B456_009G005000 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_009G005900 R-GRA-1125406-2 B456_009G005900 [cytosol] R-GRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119418 Suberin biosynthesis none Gossypium raimondii B456_009G006100 R-GRA-9025712-3 B456_009G006100 [cytosol] R-GRA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9025754 Mugineic acid biosynthesis none Gossypium raimondii B456_009G006500 R-GRA-1122463 B456_009G006500 [cytosol] R-GRA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119321 Glycerol degradation I none Gossypium raimondii B456_009G008500 R-GRA-1122932 B456_009G008500 [cytosol] R-GRA-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119317 Spermine biosynthesis none Gossypium raimondii B456_009G008500 R-GRA-1122932 B456_009G008500 [cytosol] R-GRA-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119343 Spermidine biosynthesis none Gossypium raimondii B456_009G008500 R-GRA-1122932 B456_009G008500 [cytosol] R-GRA-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119446 Lysine degradation I none Gossypium raimondii B456_009G008600 R-GRA-1125014 B456_009G008600 [cytosol] R-GRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Gossypium raimondii B456_009G009500 R-GRA-1130088 B456_009G009500 [plasma membrane] R-GRA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119314 Cellulose biosynthesis none Gossypium raimondii B456_009G010200 R-GRA-1130088-2 B456_009G010200 [plasma membrane] R-GRA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119314 Cellulose biosynthesis none Gossypium raimondii B456_009G011000 R-GRA-1126875 B456_009G011000 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_009G018000 R-GRA-9681915-5 B456_009G018000 [Golgi membrane] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_009G023200 R-GRA-9920304 B456_009G023200 [nucleoplasm] R-GRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934036 Long day regulated expression of florigens none Gossypium raimondii B456_009G023200 R-GRA-9920304 B456_009G023200 [nucleoplasm] R-GRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934108 Short day regulated expression of florigens none Gossypium raimondii B456_009G024800 R-GRA-1124809-2 B456_009G024800 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_009G026200 R-GRA-9611557-2 RAC1 [plasma membrane] R-GRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Gossypium raimondii B456_009G027000 R-GRA-6786999-2 B456_009G027000 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_009G029600 R-GRA-2685730-2 B456_009G029600 [cytosol] R-GRA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119580 IAA biosynthesis II none Gossypium raimondii B456_009G030500 R-GRA-1127015 B456_009G030500 [cytosol] R-GRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119334 Ethylene biosynthesis from methionine none Gossypium raimondii B456_009G030500 R-GRA-1127015 B456_009G030500 [cytosol] R-GRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119624 Methionine salvage pathway none Gossypium raimondii B456_009G030900 R-GRA-9826609-2 B456_009G030900 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_009G031500 R-GRA-9658664 B456_009G031500 [plasma membrane] R-GRA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119567 Beta-alanine biosynthesis I none Gossypium raimondii B456_009G034200 R-GRA-1130059 B456_009G034200 [cytosol] R-GRA-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119262 Threonine biosynthesis from homoserine none Gossypium raimondii B456_009G035400 R-GRA-1130153 B456_009G035400 [cytosol] R-GRA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119332 Jasmonic acid biosynthesis none Gossypium raimondii B456_009G035400 R-GRA-6787115 B456_009G035400 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_009G038000 R-GRA-1129561 B456_009G038000 [cytosol] R-GRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119452 Galactose degradation II none Gossypium raimondii B456_009G038000 R-GRA-1129561 B456_009G038000 [cytosol] R-GRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119465 Sucrose biosynthesis none Gossypium raimondii B456_009G038800 R-GRA-6788201 B456_009G038800 [nucleoplasm] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_009G042600 R-GRA-4415101-4 B456_009G042600 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_009G042600 R-GRA-4415101-4 B456_009G042600 [cytosol] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_009G044000 R-GRA-5367743 B456_009G044000 [cytosol] R-GRA-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5367729 Strigolactone biosynthesis none Gossypium raimondii B456_009G044300 R-GRA-5679401 B456_009G044300 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_009G045100 R-GRA-8987557 B456_009G045100 [mitochondrial matrix] R-GRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119312 Photorespiration none Gossypium raimondii B456_009G051500 R-GRA-5654957 B456_009G051500 [Golgi lumen] R-GRA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654909 Xylan biosynthesis none Gossypium raimondii B456_009G052000 R-GRA-1124809-5 B456_009G052000 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_009G056600 R-GRA-1123296-2 B456_009G056600 [chloroplast envelope] R-GRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119402 Phospholipid biosynthesis I none Gossypium raimondii B456_009G057400 R-GRA-9681915-2 B456_009G057400 [Golgi membrane] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_009G059700 R-GRA-5632157 B456_009G059700 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_009G059700 R-GRA-5632157 B456_009G059700 [nucleoplasm] R-GRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654828 Strigolactone signaling none Gossypium raimondii B456_009G060500 R-GRA-1123797 B456_009G060500 [cytosol] R-GRA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119281 Aspartate biosynthesis I none Gossypium raimondii B456_009G060500 R-GRA-5632003 B456_009G060500 [plastid stroma] R-GRA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119553 Asparagine biosynthesis none Gossypium raimondii B456_009G062300 R-GRA-6787933-3 B456_009G062300 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_009G062400 R-GRA-6787876 B456_009G062400 [nucleoplasm] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_009G062700 R-GRA-1130344-2 B456_009G062700 [cytosol] R-GRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119389 Phenylalanine biosynthesis I none Gossypium raimondii B456_009G062800 R-GRA-1128054-2 B456_009G062800 [mitochondrial matrix] R-GRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119479 Valine degradation none Gossypium raimondii B456_009G066700 R-GRA-9924543-2 CYP714D1/EUI1 [endoplasmic reticulum membrane] R-GRA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Gossypium raimondii B456_009G066900 R-GRA-6788065 B456_009G066900 [nucleoplasm] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_009G068800 R-GRA-9645872-3 B456_009G068800 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_009G068800 R-GRA-9645872-3 B456_009G068800 [nucleoplasm] R-GRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675782 Maturation none Gossypium raimondii B456_009G068800 R-GRA-9645872-3 B456_009G068800 [nucleoplasm] R-GRA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675885 Lagging strand synthesis none Gossypium raimondii B456_009G071200 R-GRA-1129769 B456_009G071200 [cytosol] R-GRA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119332 Jasmonic acid biosynthesis none Gossypium raimondii B456_009G071200 R-GRA-1129769 B456_009G071200 [cytosol] R-GRA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119618 13-LOX and 13-HPL pathway none Gossypium raimondii B456_009G072900 R-GRA-9658643 B456_009G072900 [cytosol] R-GRA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119567 Beta-alanine biosynthesis I none Gossypium raimondii B456_009G074800 R-GRA-8987571-2 B456_009G074800 [peroxisomal matrix] R-GRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119312 Photorespiration none Gossypium raimondii B456_009G076400 R-GRA-9927865-3 B456_009G076400 [nucleoplasm] R-GRA-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934257 Transition from vegetative to reproductive shoot apical meristem none Gossypium raimondii B456_009G077200 R-GRA-9611465-2 B456_009G077200 [nucleoplasm] R-GRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Gossypium raimondii B456_009G077200 R-GRA-9611445-2 B456_009G077200 [nucleoplasm] R-GRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Gossypium raimondii B456_009G080800 R-GRA-1250418-3 B456_009G080800 [cytosol] R-GRA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119374 Abscisic acid biosynthesis none Gossypium raimondii B456_009G080800 R-GRA-1129637-3 B456_009G080800 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_009G0810001 R-GRA-1250418-4 B456_009G0810001 [cytosol] R-GRA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119374 Abscisic acid biosynthesis none Gossypium raimondii B456_009G0810001 R-GRA-1129637-4 B456_009G0810001 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_009G082300 R-GRA-5632111 B456_009G082300 [cytosol] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_009G082300 R-GRA-5632216 phospho-B456_009G082300 [cytosol] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_009G086200 R-GRA-6787863-3 B456_009G086200 [nucleoplasm] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_009G088500 R-GRA-1124560 B456_009G088500 [cytosol] R-GRA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119563 UDP-D-xylose biosynthesis none Gossypium raimondii B456_009G088500 R-GRA-9681903 B456_009G088500 [Golgi lumen] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_009G088500 R-GRA-1124560 B456_009G088500 [cytosol] R-GRA-5654894 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654894 UDP-D-apiose biosynthesis none Gossypium raimondii B456_009G090300 R-GRA-1126828 B456_009G090300 [plastid] R-GRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119403 Removal of superoxide radicals none Gossypium raimondii B456_009G091300 R-GRA-5654797-3 B456_009G091300 [nucleoplasm] R-GRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654828 Strigolactone signaling none Gossypium raimondii B456_009G096200 R-GRA-4415078-5 B456_009G096200 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_009G099000 R-GRA-9611477 phospho-phosphorylated-RLCK176 [cytosol] R-GRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Gossypium raimondii B456_009G099100 R-GRA-5149632 B456_009G099100 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_009G100000 R-GRA-9611544 SPL11 [nucleoplasm] R-GRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Gossypium raimondii B456_009G100000 R-GRA-9611440 phospho-phosphorylated-SPL11 [nucleoplasm] R-GRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Gossypium raimondii B456_009G104200 R-GRA-9608682 B456_009G104200 [nucleoplasm] R-GRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934036 Long day regulated expression of florigens none Gossypium raimondii B456_009G104200 R-GRA-9608682 B456_009G104200 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_009G104200 R-GRA-9608606 B456_009G104200 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_009G104500 R-GRA-1127140-4 B456_009G104500 [cytosol] R-GRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119403 Removal of superoxide radicals none Gossypium raimondii B456_009G104600 R-GRA-9675423 B456_009G104600 [nucleoplasm] R-GRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675508 Root elongation none Gossypium raimondii B456_009G104600 R-GRA-9930290 MPK5 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_009G106000 R-GRA-9025819 B456_009G106000 [plasma membrane] R-GRA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9025727 Iron uptake and transport in root vascular system none Gossypium raimondii B456_009G107200 R-GRA-9618056-7 B456_009G107200 [plasma membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_009G107800 R-GRA-5608161-4 B456_009G107800 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_009G113900 R-GRA-1130084-3 B456_009G113900 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_009G114000 R-GRA-1124935 B456_009G114000 [cytosol] R-GRA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119349 S-methylmethionine cycle none Gossypium raimondii B456_009G117800 R-GRA-9675354 B456_009G117800 [nucleoplasm] R-GRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675508 Root elongation none Gossypium raimondii B456_009G117800 R-GRA-9675335 B456_009G117800 [mitochondrial matrix] R-GRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675508 Root elongation none Gossypium raimondii B456_009G118800 R-GRA-1126034-2 B456_009G118800 [cytosol] R-GRA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119534 Pyridoxal 5'-phosphate salvage pathway none Gossypium raimondii B456_009G118800 R-GRA-1126034-2 B456_009G118800 [cytosol] R-GRA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119594 Pyridoxal 5'-phosphate biosynthesis none Gossypium raimondii B456_009G122600 R-GRA-1128431 B456_009G122600 [cytosol] R-GRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119316 Phenylpropanoid biosynthesis none Gossypium raimondii B456_009G124000 R-GRA-6787933-5 B456_009G124000 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_009G124300 R-GRA-1128200 B456_009G124300 [cytosol] R-GRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119316 Phenylpropanoid biosynthesis none Gossypium raimondii B456_009G126400 R-GRA-5632157-4 B456_009G126400 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_009G126400 R-GRA-5632157-4 B456_009G126400 [nucleoplasm] R-GRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654828 Strigolactone signaling none Gossypium raimondii B456_009G130400 R-GRA-9675849 B456_009G130400 [nucleoplasm] R-GRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675824 DNA replication Initiation none Gossypium raimondii B456_009G132100 R-GRA-8987467 B456_009G132100 [chloroplast] R-GRA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119502 Allantoin degradation none Gossypium raimondii B456_009G137500 R-GRA-1125997-2 B456_009G137500 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_009G137500 R-GRA-1125997-2 B456_009G137500 [nucleoplasm] R-GRA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030680 Crown root development none Gossypium raimondii B456_009G138300 R-GRA-1127523-3 B456_009G138300 [cytosol] R-GRA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Gossypium raimondii B456_009G141200 R-GRA-5679376-2 B456_009G141200 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_009G143300 R-GRA-4415101-3 B456_009G143300 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_009G143300 R-GRA-4415101-3 B456_009G143300 [cytosol] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_009G148700 R-GRA-1125406 B456_009G148700 [cytosol] R-GRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119418 Suberin biosynthesis none Gossypium raimondii B456_009G150100 R-GRA-9626337 B456_009G150100 [Golgi-associated vesicle] R-GRA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9626305 Regulatory network of nutrient accumulation none Gossypium raimondii B456_009G153900 R-GRA-9826635 PCF8 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_009G154200 R-GRA-8987473-2 B456_009G154200 [peroxisomal matrix] R-GRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119312 Photorespiration none Gossypium raimondii B456_009G154200 R-GRA-1124984 B456_009G154200 [cytosol] R-GRA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119596 Glutamate biosynthesis I none Gossypium raimondii B456_009G154600 R-GRA-5221144 B456_009G154600 [plastid] R-GRA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119374 Abscisic acid biosynthesis none Gossypium raimondii B456_009G155200 R-GRA-4415060 B456_009G155200 [plasma membrane] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_009G155200 R-GRA-4415065 phospho-B456_009G155200 [plasma membrane] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_009G156300 R-GRA-9640767-2 B456_009G156300 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_009G156300 R-GRA-9640767-2 B456_009G156300 [nucleoplasm] R-GRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675824 DNA replication Initiation none Gossypium raimondii B456_009G159000 R-GRA-1126560-5 B456_009G159000 [cytosol] R-GRA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119516 Trehalose biosynthesis I none Gossypium raimondii B456_009G161200 R-GRA-1124491 B456_009G161200 [plasma membrane] R-GRA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119314 Cellulose biosynthesis none Gossypium raimondii B456_009G166100 R-GRA-5608184-3 B456_009G166100 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_009G166100 R-GRA-5608184-3 B456_009G166100 [nucleoplasm] R-GRA-9675304 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675304 Lateral root emergence none Gossypium raimondii B456_009G167800 R-GRA-1129055 B456_009G167800 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_009G173200 R-GRA-9025487-2 B456_009G173200 [cytosol] R-GRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119325 Sphingolipid metabolism none Gossypium raimondii B456_009G173700 R-GRA-1129569 B456_009G173700 [cytosol] R-GRA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119379 Flavin biosynthesis none Gossypium raimondii B456_009G176300 R-GRA-1128069 B456_009G176300 [cytosol] R-GRA-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Gossypium raimondii B456_009G176300 R-GRA-1128069 B456_009G176300 [cytosol] R-GRA-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Gossypium raimondii B456_009G178700 R-GRA-1127243 B456_009G178700 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_009G178700 R-GRA-9918268 soluble Starch Synthase (SSIIIA/SSIII-2) [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_009G179900 R-GRA-8987488-2 B456_009G179900 [mitochondrial matrix] R-GRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119312 Photorespiration none Gossypium raimondii B456_009G182300 R-GRA-1122827 B456_009G182300 [cytosol] R-GRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119334 Ethylene biosynthesis from methionine none Gossypium raimondii B456_009G182700 R-GRA-1123745-3 B456_009G182700 [endoplasmic reticulum membrane] R-GRA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119260 Cardiolipin biosynthesis none Gossypium raimondii B456_009G182700 R-GRA-1123745-3 B456_009G182700 [endoplasmic reticulum membrane] R-GRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119402 Phospholipid biosynthesis I none Gossypium raimondii B456_009G182900 R-GRA-1122849-2 B456_009G182900 [mitochondrion] R-GRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119506 tyrosine degradation I none Gossypium raimondii B456_009G183400 R-GRA-9639016-2 B456_009G183400 [cytosol] R-GRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119410 Ascorbate biosynthesis none Gossypium raimondii B456_009G183400 R-GRA-9639016-2 B456_009G183400 [cytosol] R-GRA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119434 Phytic acid biosynthesis (lipid-independent) none Gossypium raimondii B456_009G184900 R-GRA-1130006 B456_009G184900 [plastid stroma] R-GRA-1119569 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119569 Kievitone biosynthesis none Gossypium raimondii B456_009G186400 R-GRA-1126728-2 B456_009G186400 [plastid stroma] R-GRA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119424 Plastid glycolysis none Gossypium raimondii B456_009G188600 R-GRA-5632232-3 phospho-B456_009G188600 [plasma membrane] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_009G189200 R-GRA-9924417 SAUR39 [cytosol] R-GRA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924451 Shoot (tiller) formation and regulation of tiller angle none Gossypium raimondii B456_009G191000 R-GRA-1127899 B456_009G191000 [cytosol] R-GRA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119370 Sterol biosynthesis none Gossypium raimondii B456_009G195700 R-GRA-1126344 B456_009G195700 [plastid stroma] R-GRA-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119529 Sulfate activation for sulfonation none Gossypium raimondii B456_009G196100 R-GRA-5608137-2 B456_009G196100 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_009G197000 R-GRA-9826692-2 B456_009G197000 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_009G197500 R-GRA-8868961-2 B456_009G197500 [plant-type vacuole membrane] R-GRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8868949 Intracellular auxin transport none Gossypium raimondii B456_009G200400 R-GRA-1127562-4 B456_009G200400 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_009G200400 R-GRA-1130466-2 B456_009G200400 [cytosol] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_009G201100 R-GRA-9916252-2 OsEGT1 [nucleoplasm] R-GRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9916190 Root angle formation: elongation and curvature response none Gossypium raimondii B456_009G203800 R-GRA-5679436-2 B456_009G203800 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_009G204600 R-GRA-5632334-2 B456_009G204600 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_009G204600 R-GRA-5632197-2 phospho-B456_009G204600 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_009G204600 R-GRA-5632183-2 phospho-B456_009G204600 [cytosol] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_009G204600 R-GRA-5632334-2 B456_009G204600 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_009G207500 R-GRA-2731026 B456_009G207500 [endoplasmic reticulum membrane] R-GRA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119557 GA12 biosynthesis none Gossypium raimondii B456_009G207500 R-GRA-1130405 B456_009G207500 [endoplasmic reticulum membrane] R-GRA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119557 GA12 biosynthesis none Gossypium raimondii B456_009G209500 R-GRA-4827040 B456_009G209500 [plastid stroma] R-GRA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-4827054 Tetrapyrrole biosynthesis I none Gossypium raimondii B456_009G211000 R-GRA-1124249 B456_009G211000 [cytosol] R-GRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119428 GDP-D-rhamnose biosynthesis none Gossypium raimondii B456_009G211000 R-GRA-1124249 B456_009G211000 [cytosol] R-GRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Gossypium raimondii B456_009G211400 R-GRA-5654911-2 B456_009G211400 [Golgi lumen] R-GRA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654909 Xylan biosynthesis none Gossypium raimondii B456_009G212600 R-GRA-9928801-2 B456_009G212600 [nucleoplasm] R-GRA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928995 Drought escape (DE) via ABA-dependent pathway none Gossypium raimondii B456_009G213100 R-GRA-9826683-2 HSFB4A [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_009G213900 R-GRA-9920344-2 B456_009G213900 [nucleoplasm] R-GRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934108 Short day regulated expression of florigens none Gossypium raimondii B456_009G214300 R-GRA-8879009-4 B456_009G214300 [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_009G214900 R-GRA-8986682 B456_009G214900 [extracellular region] R-GRA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8986768 Anther and pollen development none Gossypium raimondii B456_009G215600 R-GRA-9640671-9 B456_009G215600 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_009G215600 R-GRA-9640671-9 B456_009G215600 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_009G215700 R-GRA-5654750-4 B456_009G215700 [cytosol] R-GRA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119393 Asparagine degradation I none Gossypium raimondii B456_009G217300 R-GRA-1123819 B456_009G217300 [plastid stroma] R-GRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119464 Methylerythritol phosphate pathway none Gossypium raimondii B456_009G219500 R-GRA-5654859-2 B456_009G219500 [nucleoplasm] R-GRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654828 Strigolactone signaling none Gossypium raimondii B456_009G219500 R-GRA-5654859-2 B456_009G219500 [nucleoplasm] R-GRA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Gossypium raimondii B456_009G222200 R-GRA-9035593 B456_009G222200 [cytosol] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_009G222200 R-GRA-9035634 B456_009G222200 [nucleoplasm] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_009G222200 R-GRA-9035593 B456_009G222200 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_009G222200 R-GRA-9035634 B456_009G222200 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_009G222700 R-GRA-1123895-4 B456_009G222700 [cytosol] R-GRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119334 Ethylene biosynthesis from methionine none Gossypium raimondii B456_009G222700 R-GRA-1123895-4 B456_009G222700 [cytosol] R-GRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119624 Methionine salvage pathway none Gossypium raimondii B456_009G223000 R-GRA-1122974-4 B456_009G223000 [mitochondrial matrix] R-GRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119479 Valine degradation none Gossypium raimondii B456_009G223200 R-GRA-9826652-3 OSH15 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_009G223200 R-GRA-9631619-3 B456_009G223200 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_009G224700 R-GRA-1130302 B456_009G224700 [cytosol] R-GRA-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119451 Xylose degradation none Gossypium raimondii B456_009G230100 R-GRA-1128980-2 B456_009G230100 [cytosol] R-GRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119586 Cyanate degradation none Gossypium raimondii B456_009G230800 R-GRA-2960195 B456_009G230800 [cytosol] R-GRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119410 Ascorbate biosynthesis none Gossypium raimondii B456_009G230800 R-GRA-2960195 B456_009G230800 [cytosol] R-GRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119570 Cytosolic glycolysis none Gossypium raimondii B456_009G231000 R-GRA-5632192-2 B456_009G231000 [cytosol] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_009G231300 R-GRA-9640777-5 B456_009G231300 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_009G231300 R-GRA-9640777-5 B456_009G231300 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_009G232000 R-GRA-5608140 B456_009G232000 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_009G233000 R-GRA-9826680 B456_009G233000 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_009G2338001 R-GRA-9918264 ISA3 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_009G235000 R-GRA-1129934 B456_009G235000 [plastid stroma] R-GRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119430 Chorismate biosynthesis none Gossypium raimondii B456_009G236700 R-GRA-8933710 B456_009G236700 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_009G240900 R-GRA-9025500-2 B456_009G240900 [endoplasmic reticulum membrane] R-GRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119325 Sphingolipid metabolism none Gossypium raimondii B456_009G241000 R-GRA-5606521-2 B456_009G241000 [plastid stroma] R-GRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119419 Lysine biosynthesis VI none Gossypium raimondii B456_009G241600 R-GRA-8987574-4 B456_009G241600 [mitochondrial matrix] R-GRA-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119311 Glycine biosynthesis I none Gossypium raimondii B456_009G241900 R-GRA-5608213-2 B456_009G241900 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_009G242100 R-GRA-1128319-2 B456_009G242100 [cytosol] R-GRA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119341 Galactosylcyclitol biosynthesis none Gossypium raimondii B456_009G245600 R-GRA-1125550 B456_009G245600 [cytosol] R-GRA-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119623 Acyl-CoA synthetase pathway none Gossypium raimondii B456_009G246200 R-GRA-4827046 B456_009G246200 [plastid stroma] R-GRA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-4827054 Tetrapyrrole biosynthesis I none Gossypium raimondii B456_009G246300 R-GRA-2685721-2 B456_009G246300 [cytosol] R-GRA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119580 IAA biosynthesis II none Gossypium raimondii B456_009G247600 R-GRA-9675818 B456_009G247600 [nucleoplasm] R-GRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675815 Leading strand synthesis none Gossypium raimondii B456_009G248100 R-GRA-9025739 B456_009G248100 [plasma membrane] R-GRA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9025727 Iron uptake and transport in root vascular system none Gossypium raimondii B456_009G248100 R-GRA-9025739 B456_009G248100 [plasma membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_009G248100 R-GRA-9025739 B456_009G248100 [plasma membrane] R-GRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639136 Response to Aluminum stress none Gossypium raimondii B456_009G249400 R-GRA-8934208 B456_009G249400 [nucleoplasm] R-GRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934036 Long day regulated expression of florigens none Gossypium raimondii B456_009G251000 R-GRA-9611889-3 B456_009G251000 [mitochondrial matrix] R-GRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119479 Valine degradation none Gossypium raimondii B456_009G253400 R-GRA-8854121-2 B456_009G253400 [cytosol] R-GRA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119556 Choline biosynthesis I none Gossypium raimondii B456_009G259200 R-GRA-8854108 B456_009G259200 [cytosol] R-GRA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119556 Choline biosynthesis I none Gossypium raimondii B456_009G265900 R-GRA-5631969 B456_009G265900 [mitochondrial matrix] R-GRA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119289 Arginine degradation none Gossypium raimondii B456_009G265900 R-GRA-5633275 B456_009G265900 [cytosol] R-GRA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119495 Citrulline biosynthesis none Gossypium raimondii B456_009G268500 R-GRA-1129187-2 B456_009G268500 [cytosol] R-GRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119276 Choline biosynthesis III none Gossypium raimondii B456_009G268600 R-GRA-1127899-2 B456_009G268600 [cytosol] R-GRA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119370 Sterol biosynthesis none Gossypium raimondii B456_009G268800 R-GRA-5083827 B456_009G268800 [mitochondrial matrix] R-GRA-1119319 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119319 Alanine biosynthesis III none Gossypium raimondii B456_009G268800 R-GRA-5083827 B456_009G268800 [mitochondrial matrix] R-GRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119612 Cysteine degradation none Gossypium raimondii B456_009G274000 R-GRA-5632334 B456_009G274000 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_009G274000 R-GRA-5632197 phospho-B456_009G274000 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_009G274000 R-GRA-5632183 phospho-B456_009G274000 [cytosol] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_009G274000 R-GRA-5632334 B456_009G274000 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_009G275700 R-GRA-9928801-4 B456_009G275700 [nucleoplasm] R-GRA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928995 Drought escape (DE) via ABA-dependent pathway none Gossypium raimondii B456_009G276200 R-GRA-5654750 B456_009G276200 [cytosol] R-GRA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119393 Asparagine degradation I none Gossypium raimondii B456_009G277500 R-GRA-9035593-5 B456_009G277500 [cytosol] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_009G277500 R-GRA-9035634-5 B456_009G277500 [nucleoplasm] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_009G277500 R-GRA-9035593-5 B456_009G277500 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_009G277500 R-GRA-9035634-5 B456_009G277500 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_009G277700 R-GRA-1123895-6 B456_009G277700 [cytosol] R-GRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119334 Ethylene biosynthesis from methionine none Gossypium raimondii B456_009G277700 R-GRA-1123895-6 B456_009G277700 [cytosol] R-GRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119624 Methionine salvage pathway none Gossypium raimondii B456_009G277800 R-GRA-1122974-5 B456_009G277800 [mitochondrial matrix] R-GRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119479 Valine degradation none Gossypium raimondii B456_009G279800 R-GRA-1124490 B456_009G279800 [cytosol] R-GRA-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119534 Pyridoxal 5'-phosphate salvage pathway none Gossypium raimondii B456_009G279800 R-GRA-1124490 B456_009G279800 [cytosol] R-GRA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119594 Pyridoxal 5'-phosphate biosynthesis none Gossypium raimondii B456_009G280900 R-GRA-8933710-2 B456_009G280900 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_009G286400 R-GRA-8854108-3 B456_009G286400 [cytosol] R-GRA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119556 Choline biosynthesis I none Gossypium raimondii B456_009G289200 R-GRA-9675481-2 B456_009G289200 [cytosol] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_009G291300 R-GRA-9916305-2 B456_009G291300 [nucleoplasm] R-GRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9916190 Root angle formation: elongation and curvature response none Gossypium raimondii B456_009G293300 R-GRA-1129811 B456_009G293300 [mitochondrion] R-GRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119403 Removal of superoxide radicals none Gossypium raimondii B456_009G295000 R-GRA-9675399 B456_009G295000 [nucleoplasm] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_009G296100 R-GRA-1123477 B456_009G296100 [cytosol] R-GRA-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119451 Xylose degradation none Gossypium raimondii B456_009G299000 R-GRA-9640763-3 B456_009G299000 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_009G299000 R-GRA-9640885-3 phospho-B456_009G299000 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_009G301900 R-GRA-1127089 B456_009G301900 [cytosol] R-GRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119465 Sucrose biosynthesis none Gossypium raimondii B456_009G302100 R-GRA-1129136 B456_009G302100 [plastid stroma] R-GRA-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Gossypium raimondii B456_009G305300 R-GRA-9918273 B456_009G305300 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_009G305300 R-GRA-9626376 B456_009G305300 [plastid stroma] R-GRA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9626305 Regulatory network of nutrient accumulation none Gossypium raimondii B456_009G306100 R-GRA-8868866 B456_009G306100 [endoplasmic reticulum membrane] R-GRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8868949 Intracellular auxin transport none Gossypium raimondii B456_009G306200 R-GRA-8868866-2 B456_009G306200 [endoplasmic reticulum membrane] R-GRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8868949 Intracellular auxin transport none Gossypium raimondii B456_009G306300 R-GRA-8868866-5 B456_009G306300 [endoplasmic reticulum membrane] R-GRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8868949 Intracellular auxin transport none Gossypium raimondii B456_009G314200 R-GRA-1130456-2 B456_009G314200 [plastid stroma] R-GRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119430 Chorismate biosynthesis none Gossypium raimondii B456_009G321100 R-GRA-1123470-2 B456_009G321100 [cytosol] R-GRA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119292 Cytokinins 7-N-glucoside biosynthesis none Gossypium raimondii B456_009G321100 R-GRA-1123470-2 B456_009G321100 [cytosol] R-GRA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119375 Cytokinins 9-N-glucoside biosynthesis none Gossypium raimondii B456_009G321100 R-GRA-1123470-2 B456_009G321100 [cytosol] R-GRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119473 Cytokinins-O-glucoside biosynthesis none Gossypium raimondii B456_009G321700 R-GRA-9681885-4 B456_009G321700 [Golgi membrane] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_009G322200 R-GRA-1123998 B456_009G322200 [chloroplast] R-GRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119494 Tryptophan biosynthesis none Gossypium raimondii B456_009G322600 R-GRA-5654797 B456_009G322600 [nucleoplasm] R-GRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654828 Strigolactone signaling none Gossypium raimondii B456_009G323300 R-GRA-4752546-10 B456_009G323300 [plastid stroma] R-GRA-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119498 Phylloquinone biosynthesis none Gossypium raimondii B456_009G329200 R-GRA-5679470-7 B456_009G329200 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_009G333700 R-GRA-9645947 B456_009G333700 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_009G333700 R-GRA-9645947 B456_009G333700 [nucleoplasm] R-GRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675782 Maturation none Gossypium raimondii B456_009G333700 R-GRA-9645947 B456_009G333700 [nucleoplasm] R-GRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675815 Leading strand synthesis none Gossypium raimondii B456_009G333700 R-GRA-9645947 B456_009G333700 [nucleoplasm] R-GRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675824 DNA replication Initiation none Gossypium raimondii B456_009G333700 R-GRA-9645947 B456_009G333700 [nucleoplasm] R-GRA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675885 Lagging strand synthesis none Gossypium raimondii B456_009G338000 R-GRA-1130327-3 B456_009G338000 [cytosol] R-GRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119586 Cyanate degradation none Gossypium raimondii B456_009G342900 R-GRA-5149676 B456_009G342900 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_009G346100 R-GRA-5632120 B456_009G346100 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_009G348800 R-GRA-1130101 B456_009G348800 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_009G355100 R-GRA-6787276 B456_009G355100 [plastid stroma] R-GRA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119261 Salicylate biosynthesis none Gossypium raimondii B456_009G355100 R-GRA-6787950 B456_009G355100 [nucleoplasm] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_009G361300 R-GRA-9930197-2 MPK8 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_009G362600 R-GRA-1126560-2 B456_009G362600 [cytosol] R-GRA-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119516 Trehalose biosynthesis I none Gossypium raimondii B456_009G366800 R-GRA-9675827-2 B456_009G366800 [nucleoplasm] R-GRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675782 Maturation none Gossypium raimondii B456_009G366800 R-GRA-9675827-2 B456_009G366800 [nucleoplasm] R-GRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675815 Leading strand synthesis none Gossypium raimondii B456_009G366800 R-GRA-9675827-2 B456_009G366800 [nucleoplasm] R-GRA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675885 Lagging strand synthesis none Gossypium raimondii B456_009G372600 R-GRA-1128071-2 B456_009G372600 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_009G389800 R-GRA-1129926 B456_009G389800 [cytosol] R-GRA-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Gossypium raimondii B456_009G395300 R-GRA-1127089-2 B456_009G395300 [cytosol] R-GRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119465 Sucrose biosynthesis none Gossypium raimondii B456_009G3977001 R-GRA-9608693-2 B456_009G3977001 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_009G398700 R-GRA-1127161 B456_009G398700 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_009G401600 R-GRA-1125374 B456_009G401600 [cytosol] R-GRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119586 Cyanate degradation none Gossypium raimondii B456_009G402000 R-GRA-1125374-2 B456_009G402000 [cytosol] R-GRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119586 Cyanate degradation none Gossypium raimondii B456_009G402500 R-GRA-1123337 B456_009G402500 [plastid stroma] R-GRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119509 Histidine biosynthesis I none Gossypium raimondii B456_009G403800 R-GRA-9608694-3 B456_009G403800 [cytosol] R-GRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928831 Severe drought none Gossypium raimondii B456_009G403800 R-GRA-9928774-3 B456_009G403800 [nucleoplasm] R-GRA-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928831 Severe drought none Gossypium raimondii B456_009G406400 R-GRA-1124067 B456_009G406400 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_009G406400 R-GRA-9626520 B456_009G406400 [plastid stroma] R-GRA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9626305 Regulatory network of nutrient accumulation none Gossypium raimondii B456_009G407400 R-GRA-5149646-3 B456_009G407400 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_009G407400 R-GRA-1126652-3 B456_009G407400 [cytosol] R-GRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119570 Cytosolic glycolysis none Gossypium raimondii B456_009G407500 R-GRA-5149646-2 B456_009G407500 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_009G407500 R-GRA-1126652-2 B456_009G407500 [cytosol] R-GRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119570 Cytosolic glycolysis none Gossypium raimondii B456_009G410300 R-GRA-1127031-2 B456_009G410300 [cytosol] R-GRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119460 Isoleucine biosynthesis from threonine none Gossypium raimondii B456_009G411700 R-GRA-1128678 B456_009G411700 [cytosol] R-GRA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119292 Cytokinins 7-N-glucoside biosynthesis none Gossypium raimondii B456_009G411700 R-GRA-1128678 B456_009G411700 [cytosol] R-GRA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119375 Cytokinins 9-N-glucoside biosynthesis none Gossypium raimondii B456_009G411700 R-GRA-1128678 B456_009G411700 [cytosol] R-GRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119473 Cytokinins-O-glucoside biosynthesis none Gossypium raimondii B456_009G413400 R-GRA-9826654-2 B456_009G413400 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_009G413500 R-GRA-1130210-2 B456_009G413500 [cytosol] R-GRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119586 Cyanate degradation none Gossypium raimondii B456_009G416300 R-GRA-1130235-2 B456_009G416300 [cytosol] R-GRA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119261 Salicylate biosynthesis none Gossypium raimondii B456_009G416300 R-GRA-1130235-2 B456_009G416300 [cytosol] R-GRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119418 Suberin biosynthesis none Gossypium raimondii B456_009G416300 R-GRA-1130235-2 B456_009G416300 [cytosol] R-GRA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119582 Phenylpropanoid biosynthesis, initial reactions none Gossypium raimondii B456_009G416400 R-GRA-1130235-7 B456_009G416400 [cytosol] R-GRA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119261 Salicylate biosynthesis none Gossypium raimondii B456_009G416400 R-GRA-1130235-7 B456_009G416400 [cytosol] R-GRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119418 Suberin biosynthesis none Gossypium raimondii B456_009G416400 R-GRA-1130235-7 B456_009G416400 [cytosol] R-GRA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119582 Phenylpropanoid biosynthesis, initial reactions none Gossypium raimondii B456_009G418100 R-GRA-9618056-3 B456_009G418100 [plasma membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_009G422000 R-GRA-9639217 B456_009G422000 [plasma membrane] R-GRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639136 Response to Aluminum stress none Gossypium raimondii B456_009G425500 R-GRA-1129867-3 B456_009G425500 [chloroplast] R-GRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119494 Tryptophan biosynthesis none Gossypium raimondii B456_009G425600 R-GRA-9918175-4 B456_009G425600 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_009G441000 R-GRA-1128606-3 B456_009G441000 [mitochondrial matrix] R-GRA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119365 Lysine degradation II none Gossypium raimondii B456_009G441000 R-GRA-1173244-3 B456_009G441000 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_009G441800 R-GRA-1122403 B456_009G441800 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_009G442200 R-GRA-1128906 B456_009G442200 [cytosol] R-GRA-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119444 Canavanine biosynthesis none Gossypium raimondii B456_009G443900 R-GRA-5632251-2 B456_009G443900 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_009G444700 R-GRA-9675426 B456_009G444700 [nucleoplasm] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_010G004700 R-GRA-1123465 B456_010G004700 [plastid stroma] R-GRA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119424 Plastid glycolysis none Gossypium raimondii B456_010G004700 R-GRA-5633368 B456_010G004700 [cytosol] R-GRA-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119601 Trehalose degradation II none Gossypium raimondii B456_010G006600 R-GRA-9826692-6 B456_010G006600 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_010G006900 R-GRA-8868961 B456_010G006900 [plant-type vacuole membrane] R-GRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8868949 Intracellular auxin transport none Gossypium raimondii B456_010G008700 R-GRA-1127562 B456_010G008700 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_010G008700 R-GRA-1130466 B456_010G008700 [cytosol] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_010G011200 R-GRA-5679436 B456_010G011200 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_010G015900 R-GRA-2731026-2 B456_010G015900 [endoplasmic reticulum membrane] R-GRA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119557 GA12 biosynthesis none Gossypium raimondii B456_010G015900 R-GRA-1130405-2 B456_010G015900 [endoplasmic reticulum membrane] R-GRA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119557 GA12 biosynthesis none Gossypium raimondii B456_010G019500 R-GRA-5654911 B456_010G019500 [Golgi lumen] R-GRA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654909 Xylan biosynthesis none Gossypium raimondii B456_010G020700 R-GRA-9826683 HSFB4A [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_010G021500 R-GRA-9920344-5 B456_010G021500 [nucleoplasm] R-GRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934108 Short day regulated expression of florigens none Gossypium raimondii B456_010G021900 R-GRA-8879009-2 B456_010G021900 [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_010G022700 R-GRA-8986682-2 B456_010G022700 [extracellular region] R-GRA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8986768 Anther and pollen development none Gossypium raimondii B456_010G023000 R-GRA-5654750-3 B456_010G023000 [cytosol] R-GRA-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119393 Asparagine degradation I none Gossypium raimondii B456_010G025600 R-GRA-5654859 B456_010G025600 [nucleoplasm] R-GRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654828 Strigolactone signaling none Gossypium raimondii B456_010G025600 R-GRA-5654859 B456_010G025600 [nucleoplasm] R-GRA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Gossypium raimondii B456_010G027700 R-GRA-9035593-6 B456_010G027700 [cytosol] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_010G027700 R-GRA-9035634-6 B456_010G027700 [nucleoplasm] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_010G027700 R-GRA-9035593-6 B456_010G027700 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_010G027700 R-GRA-9035634-6 B456_010G027700 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_010G028900 R-GRA-1123757-2 B456_010G028900 [cytosol] R-GRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119460 Isoleucine biosynthesis from threonine none Gossypium raimondii B456_010G028900 R-GRA-1123757-2 B456_010G028900 [cytosol] R-GRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119473 Cytokinins-O-glucoside biosynthesis none Gossypium raimondii B456_010G028900 R-GRA-1123757-2 B456_010G028900 [cytosol] R-GRA-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119496 Pantothenate biosynthesis I none Gossypium raimondii B456_010G028900 R-GRA-1123757-2 B456_010G028900 [cytosol] R-GRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119540 Leucine biosynthesis none Gossypium raimondii B456_010G028900 R-GRA-1123757-2 B456_010G028900 [cytosol] R-GRA-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119544 Pantothenate biosynthesis II none Gossypium raimondii B456_010G029000 R-GRA-9826652-2 OSH15 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_010G029000 R-GRA-9631619-2 B456_010G029000 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_010G031000 R-GRA-5654942-3 B456_010G031000 [Golgi lumen] R-GRA-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654909 Xylan biosynthesis none Gossypium raimondii B456_010G035600 R-GRA-2960195-2 B456_010G035600 [cytosol] R-GRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119410 Ascorbate biosynthesis none Gossypium raimondii B456_010G035600 R-GRA-2960195-2 B456_010G035600 [cytosol] R-GRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119570 Cytosolic glycolysis none Gossypium raimondii B456_010G035800 R-GRA-9640777-3 B456_010G035800 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_010G035800 R-GRA-9640777-3 B456_010G035800 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_010G036400 R-GRA-5608140-2 B456_010G036400 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_010G046000 R-GRA-5608213 B456_010G046000 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_010G046600 R-GRA-1128319 B456_010G046600 [cytosol] R-GRA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119341 Galactosylcyclitol biosynthesis none Gossypium raimondii B456_010G046700 R-GRA-9626449 B456_010G046700 [cytosol] R-GRA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9626305 Regulatory network of nutrient accumulation none Gossypium raimondii B456_010G050200 R-GRA-1125550-2 B456_010G050200 [cytosol] R-GRA-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119623 Acyl-CoA synthetase pathway none Gossypium raimondii B456_010G051100 R-GRA-2685721 B456_010G051100 [cytosol] R-GRA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119580 IAA biosynthesis II none Gossypium raimondii B456_010G051900 R-GRA-9930308-2 SNAC2 (OsNAC6) [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_010G052500 R-GRA-9025739-3 B456_010G052500 [plasma membrane] R-GRA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9025727 Iron uptake and transport in root vascular system none Gossypium raimondii B456_010G052500 R-GRA-9025739-3 B456_010G052500 [plasma membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_010G052500 R-GRA-9025739-3 B456_010G052500 [plasma membrane] R-GRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639136 Response to Aluminum stress none Gossypium raimondii B456_010G052800 R-GRA-9675877 B456_010G052800 [nucleoplasm] R-GRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675815 Leading strand synthesis none Gossypium raimondii B456_010G063400 R-GRA-1128396 B456_010G063400 [cytosol] R-GRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119473 Cytokinins-O-glucoside biosynthesis none Gossypium raimondii B456_010G071100 R-GRA-1124809-3 B456_010G071100 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_010G072900 R-GRA-1125734-2 B456_010G072900 [cytosol] R-GRA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119281 Aspartate biosynthesis I none Gossypium raimondii B456_010G072900 R-GRA-5632000-2 B456_010G072900 [plastid stroma] R-GRA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119553 Asparagine biosynthesis none Gossypium raimondii B456_010G073100 R-GRA-5633387-2 B456_010G073100 [mitochondrial matrix] R-GRA-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119445 Beta-alanine biosynthesis II none Gossypium raimondii B456_010G073300 R-GRA-9611557 RAC1 [plasma membrane] R-GRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Gossypium raimondii B456_010G074900 R-GRA-6786999 B456_010G074900 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_010G076300 R-GRA-1122541-2 B456_010G076300 [cytosol] R-GRA-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Gossypium raimondii B456_010G076300 R-GRA-1122541-2 B456_010G076300 [cytosol] R-GRA-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Gossypium raimondii B456_010G079700 R-GRA-1127523-6 B456_010G079700 [cytosol] R-GRA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Gossypium raimondii B456_010G080300 R-GRA-2685730-3 B456_010G080300 [cytosol] R-GRA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119580 IAA biosynthesis II none Gossypium raimondii B456_010G081800 R-GRA-9826609 B456_010G081800 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_010G085500 R-GRA-1130059-3 B456_010G085500 [cytosol] R-GRA-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119262 Threonine biosynthesis from homoserine none Gossypium raimondii B456_010G087400 R-GRA-1130153-2 B456_010G087400 [cytosol] R-GRA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119332 Jasmonic acid biosynthesis none Gossypium raimondii B456_010G087400 R-GRA-6787115-2 B456_010G087400 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_010G091300 R-GRA-5608125 B456_010G091300 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_010G091800 R-GRA-1129561-3 B456_010G091800 [cytosol] R-GRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119452 Galactose degradation II none Gossypium raimondii B456_010G091800 R-GRA-1129561-3 B456_010G091800 [cytosol] R-GRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119465 Sucrose biosynthesis none Gossypium raimondii B456_010G092100 R-GRA-1126373 B456_010G092100 [cytosol] R-GRA-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Gossypium raimondii B456_010G092300 R-GRA-1129561-5 B456_010G092300 [cytosol] R-GRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119452 Galactose degradation II none Gossypium raimondii B456_010G092300 R-GRA-1129561-5 B456_010G092300 [cytosol] R-GRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119465 Sucrose biosynthesis none Gossypium raimondii B456_010G094700 R-GRA-1129571 B456_010G094700 [mitochondrion] R-GRA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119365 Lysine degradation II none Gossypium raimondii B456_010G095300 R-GRA-6788201-2 B456_010G095300 [nucleoplasm] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_010G099600 R-GRA-5679401-2 B456_010G099600 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_010G101200 R-GRA-8987557-2 B456_010G101200 [mitochondrial matrix] R-GRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119312 Photorespiration none Gossypium raimondii B456_010G106400 R-GRA-5367761 B456_010G106400 [plastid stroma] R-GRA-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5367729 Strigolactone biosynthesis none Gossypium raimondii B456_010G109400 R-GRA-1124809 B456_010G109400 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_010G113400 R-GRA-1123296 B456_010G113400 [chloroplast envelope] R-GRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119402 Phospholipid biosynthesis I none Gossypium raimondii B456_010G114100 R-GRA-9681915 B456_010G114100 [Golgi membrane] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_010G116100 R-GRA-1127574-2 B456_010G116100 [cytosol] R-GRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119465 Sucrose biosynthesis none Gossypium raimondii B456_010G116400 R-GRA-1129485-2 B456_010G116400 [cytosol] R-GRA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119341 Galactosylcyclitol biosynthesis none Gossypium raimondii B456_010G116500 R-GRA-5632157-2 B456_010G116500 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_010G116500 R-GRA-5632157-2 B456_010G116500 [nucleoplasm] R-GRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654828 Strigolactone signaling none Gossypium raimondii B456_010G117400 R-GRA-1123797-2 B456_010G117400 [cytosol] R-GRA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119281 Aspartate biosynthesis I none Gossypium raimondii B456_010G117400 R-GRA-5632003-2 B456_010G117400 [plastid stroma] R-GRA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119553 Asparagine biosynthesis none Gossypium raimondii B456_010G117500 R-GRA-9675476 B456_010G117500 [nucleoplasm] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_010G118300 R-GRA-6787933 B456_010G118300 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_010G118700 R-GRA-1130344 B456_010G118700 [cytosol] R-GRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119389 Phenylalanine biosynthesis I none Gossypium raimondii B456_010G124600 R-GRA-1130281 B456_010G124600 [cytosol] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_010G124800 R-GRA-9640708 phospho-B456_010G124800 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_010G124800 R-GRA-9640770 B456_010G124800 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_010G124800 R-GRA-9640708 phospho-B456_010G124800 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_010G1270001 R-GRA-1123489 B456_010G1270001 [cytosol] R-GRA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119370 Sterol biosynthesis none Gossypium raimondii B456_010G131100 R-GRA-9025443 B456_010G131100 [endoplasmic reticulum membrane] R-GRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119325 Sphingolipid metabolism none Gossypium raimondii B456_010G133400 R-GRA-8854108-4 B456_010G133400 [cytosol] R-GRA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119556 Choline biosynthesis I none Gossypium raimondii B456_010G134700 R-GRA-1124242 B456_010G134700 [plastid stroma] R-GRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119464 Methylerythritol phosphate pathway none Gossypium raimondii B456_010G138000 R-GRA-1126860 B456_010G138000 [cytosol] R-GRA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119321 Glycerol degradation I none Gossypium raimondii B456_010G142100 R-GRA-1124484 B456_010G142100 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_010G142300 R-GRA-1125489-2 B456_010G142300 [Golgi membrane] R-GRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119428 GDP-D-rhamnose biosynthesis none Gossypium raimondii B456_010G142300 R-GRA-1127743-2 B456_010G142300 [cytosol] R-GRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119428 GDP-D-rhamnose biosynthesis none Gossypium raimondii B456_010G142300 R-GRA-1125489-2 B456_010G142300 [Golgi membrane] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_010G142300 R-GRA-1125489-2 B456_010G142300 [Golgi membrane] R-GRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Gossypium raimondii B456_010G142300 R-GRA-1127743-2 B456_010G142300 [cytosol] R-GRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Gossypium raimondii B456_010G143100 R-GRA-1124935-2 B456_010G143100 [cytosol] R-GRA-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119349 S-methylmethionine cycle none Gossypium raimondii B456_010G153100 R-GRA-9025541 B456_010G153100 [endoplasmic reticulum membrane] R-GRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119325 Sphingolipid metabolism none Gossypium raimondii B456_010G157400 R-GRA-5608184 B456_010G157400 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_010G157400 R-GRA-5608184 B456_010G157400 [nucleoplasm] R-GRA-9675304 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675304 Lateral root emergence none Gossypium raimondii B456_010G159200 R-GRA-1126157-2 B456_010G159200 [cytosol] R-GRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119460 Isoleucine biosynthesis from threonine none Gossypium raimondii B456_010G159200 R-GRA-1126157-2 B456_010G159200 [cytosol] R-GRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119600 Valine biosynthesis none Gossypium raimondii B456_010G159500 R-GRA-5654840 B456_010G159500 [nucleoplasm] R-GRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654828 Strigolactone signaling none Gossypium raimondii B456_010G159500 R-GRA-5654840 B456_010G159500 [nucleoplasm] R-GRA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Gossypium raimondii B456_010G162400 R-GRA-9618197-3 B456_010G162400 [plasma membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_010G166900 R-GRA-5221144-5 B456_010G166900 [plastid] R-GRA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119374 Abscisic acid biosynthesis none Gossypium raimondii B456_010G167200 R-GRA-5631953 B456_010G167200 [mitochondrial matrix] R-GRA-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119289 Arginine degradation none Gossypium raimondii B456_010G167200 R-GRA-1124214 B456_010G167200 [cytosol] R-GRA-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119318 Proline biosynthesis V (from arginine) none Gossypium raimondii B456_010G167200 R-GRA-1124214 B456_010G167200 [cytosol] R-GRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119610 Biotin biosynthesis II none Gossypium raimondii B456_010G171600 R-GRA-9626337-2 B456_010G171600 [Golgi-associated vesicle] R-GRA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9626305 Regulatory network of nutrient accumulation none Gossypium raimondii B456_010G173900 R-GRA-1130222-2 B456_010G173900 [cytosol] R-GRA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119596 Glutamate biosynthesis I none Gossypium raimondii B456_010G174000 R-GRA-1130222 B456_010G174000 [cytosol] R-GRA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119596 Glutamate biosynthesis I none Gossypium raimondii B456_010G174800 R-GRA-1124813 B456_010G174800 [mitochondrial matrix] R-GRA-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119337 Proline degradation none Gossypium raimondii B456_010G174800 R-GRA-8986570 B456_010G174800 [mitochondrial matrix] R-GRA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119365 Lysine degradation II none Gossypium raimondii B456_010G174800 R-GRA-9658682 B456_010G174800 [cytosol] R-GRA-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119567 Beta-alanine biosynthesis I none Gossypium raimondii B456_010G178300 R-GRA-9918175-3 B456_010G178300 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_010G179400 R-GRA-1127999 B456_010G179400 [mitochondrial inner membrane] R-GRA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119260 Cardiolipin biosynthesis none Gossypium raimondii B456_010G180700 R-GRA-1129739 B456_010G180700 [cytosol] R-GRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119389 Phenylalanine biosynthesis I none Gossypium raimondii B456_010G181500 R-GRA-8987488 B456_010G181500 [mitochondrial matrix] R-GRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119312 Photorespiration none Gossypium raimondii B456_010G181600 R-GRA-1128606 B456_010G181600 [mitochondrial matrix] R-GRA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119365 Lysine degradation II none Gossypium raimondii B456_010G181600 R-GRA-1173244 B456_010G181600 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_010G184900 R-GRA-1122827-3 B456_010G184900 [cytosol] R-GRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119334 Ethylene biosynthesis from methionine none Gossypium raimondii B456_010G185000 R-GRA-1122827-7 B456_010G185000 [cytosol] R-GRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119334 Ethylene biosynthesis from methionine none Gossypium raimondii B456_010G186000 R-GRA-1127414 B456_010G186000 [cytosol] R-GRA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119265 Tetrahydrofolate biosynthesis I none Gossypium raimondii B456_010G190900 R-GRA-1125766-2 B456_010G190900 [cytosol] R-GRA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119557 GA12 biosynthesis none Gossypium raimondii B456_010G198200 R-GRA-9675860 B456_010G198200 [nucleoplasm] R-GRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675824 DNA replication Initiation none Gossypium raimondii B456_010G199400 R-GRA-9681885 B456_010G199400 [Golgi membrane] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_010G201300 R-GRA-9684723-2 B456_010G201300 [cytosol] R-GRA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9609102 Flower development none Gossypium raimondii B456_010G201400 R-GRA-9684723-4 B456_010G201400 [cytosol] R-GRA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9609102 Flower development none Gossypium raimondii B456_010G205900 R-GRA-1125631-2 B456_010G205900 [cytosol] R-GRA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119321 Glycerol degradation I none Gossypium raimondii B456_010G215200 R-GRA-9916302 B456_010G215200 [nucleoplasm] R-GRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934036 Long day regulated expression of florigens none Gossypium raimondii B456_010G215200 R-GRA-9916302 B456_010G215200 [nucleoplasm] R-GRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9916190 Root angle formation: elongation and curvature response none Gossypium raimondii B456_010G217000 R-GRA-1123477-2 B456_010G217000 [cytosol] R-GRA-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119451 Xylose degradation none Gossypium raimondii B456_010G217500 R-GRA-9025739-5 B456_010G217500 [plasma membrane] R-GRA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9025727 Iron uptake and transport in root vascular system none Gossypium raimondii B456_010G217500 R-GRA-9025739-5 B456_010G217500 [plasma membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_010G217500 R-GRA-9025739-5 B456_010G217500 [plasma membrane] R-GRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639136 Response to Aluminum stress none Gossypium raimondii B456_010G217700 R-GRA-9025739-2 B456_010G217700 [plasma membrane] R-GRA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9025727 Iron uptake and transport in root vascular system none Gossypium raimondii B456_010G217700 R-GRA-9025739-2 B456_010G217700 [plasma membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_010G217700 R-GRA-9025739-2 B456_010G217700 [plasma membrane] R-GRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639136 Response to Aluminum stress none Gossypium raimondii B456_010G220700 R-GRA-1125489-3 B456_010G220700 [Golgi membrane] R-GRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119428 GDP-D-rhamnose biosynthesis none Gossypium raimondii B456_010G220700 R-GRA-1127743-3 B456_010G220700 [cytosol] R-GRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119428 GDP-D-rhamnose biosynthesis none Gossypium raimondii B456_010G220700 R-GRA-1125489-3 B456_010G220700 [Golgi membrane] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_010G220700 R-GRA-1125489-3 B456_010G220700 [Golgi membrane] R-GRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Gossypium raimondii B456_010G220700 R-GRA-1127743-3 B456_010G220700 [cytosol] R-GRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Gossypium raimondii B456_010G221800 R-GRA-9675354-2 B456_010G221800 [nucleoplasm] R-GRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675508 Root elongation none Gossypium raimondii B456_010G221800 R-GRA-9675335-2 B456_010G221800 [mitochondrial matrix] R-GRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675508 Root elongation none Gossypium raimondii B456_010G222400 R-GRA-6787933-4 B456_010G222400 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_010G224000 R-GRA-5632157-3 B456_010G224000 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_010G224000 R-GRA-5632157-3 B456_010G224000 [nucleoplasm] R-GRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654828 Strigolactone signaling none Gossypium raimondii B456_010G225600 R-GRA-1125906 B456_010G225600 [cytosol] R-GRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119276 Choline biosynthesis III none Gossypium raimondii B456_010G231100 R-GRA-1125997 B456_010G231100 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_010G231100 R-GRA-1125997 B456_010G231100 [nucleoplasm] R-GRA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030680 Crown root development none Gossypium raimondii B456_010G236900 R-GRA-9626337-4 B456_010G236900 [Golgi-associated vesicle] R-GRA-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9626305 Regulatory network of nutrient accumulation none Gossypium raimondii B456_010G239400 R-GRA-1129175 B456_010G239400 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_010G240400 R-GRA-9618197-2 B456_010G240400 [plasma membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_010G240700 R-GRA-5632315-3 B456_010G240700 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_010G240700 R-GRA-5632284-3 phospho-B456_010G240700 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_010G240700 R-GRA-5632342-3 phospho-B456_010G240700 [cytosol] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_010G240700 R-GRA-5632315-3 B456_010G240700 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_010G241600 R-GRA-5632139-3 B456_010G241600 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_010G247900 R-GRA-1127491 B456_010G247900 [chloroplast] R-GRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119312 Photorespiration none Gossypium raimondii B456_010G248300 R-GRA-1126998 B456_010G248300 [cytosol] R-GRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119615 Mevalonate pathway none Gossypium raimondii B456_010G250300 R-GRA-1122849 B456_010G250300 [mitochondrion] R-GRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119506 tyrosine degradation I none Gossypium raimondii B456_010G250500 R-GRA-1123745-4 B456_010G250500 [endoplasmic reticulum membrane] R-GRA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119260 Cardiolipin biosynthesis none Gossypium raimondii B456_010G250500 R-GRA-1123745-4 B456_010G250500 [endoplasmic reticulum membrane] R-GRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119402 Phospholipid biosynthesis I none Gossypium raimondii B456_010G255600 R-GRA-1123433 B456_010G255600 [cytosol] R-GRA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119332 Jasmonic acid biosynthesis none Gossypium raimondii B456_010G255600 R-GRA-1123433 B456_010G255600 [cytosol] R-GRA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119618 13-LOX and 13-HPL pathway none Gossypium raimondii B456_010G255700 R-GRA-1123433-3 B456_010G255700 [cytosol] R-GRA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119332 Jasmonic acid biosynthesis none Gossypium raimondii B456_010G255700 R-GRA-1123433-3 B456_010G255700 [cytosol] R-GRA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119618 13-LOX and 13-HPL pathway none Gossypium raimondii B456_011G000800 R-GRA-1126157-3 B456_011G000800 [cytosol] R-GRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119460 Isoleucine biosynthesis from threonine none Gossypium raimondii B456_011G000800 R-GRA-1126157-3 B456_011G000800 [cytosol] R-GRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119600 Valine biosynthesis none Gossypium raimondii B456_011G002400 R-GRA-9025513 B456_011G002400 [endoplasmic reticulum membrane] R-GRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119325 Sphingolipid metabolism none Gossypium raimondii B456_011G002400 R-GRA-1129700 B456_011G002400 [cytosol] R-GRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119610 Biotin biosynthesis II none Gossypium raimondii B456_011G002700 R-GRA-1123867 B456_011G002700 [cytosol] R-GRA-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119370 Sterol biosynthesis none Gossypium raimondii B456_011G006300 R-GRA-1125489 B456_011G006300 [Golgi membrane] R-GRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119428 GDP-D-rhamnose biosynthesis none Gossypium raimondii B456_011G006300 R-GRA-1127743 B456_011G006300 [cytosol] R-GRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119428 GDP-D-rhamnose biosynthesis none Gossypium raimondii B456_011G006300 R-GRA-1125489 B456_011G006300 [Golgi membrane] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_011G006300 R-GRA-1125489 B456_011G006300 [Golgi membrane] R-GRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Gossypium raimondii B456_011G006300 R-GRA-1127743 B456_011G006300 [cytosol] R-GRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Gossypium raimondii B456_011G009200 R-GRA-9639016 B456_011G009200 [cytosol] R-GRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119410 Ascorbate biosynthesis none Gossypium raimondii B456_011G009200 R-GRA-9639016 B456_011G009200 [cytosol] R-GRA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119434 Phytic acid biosynthesis (lipid-independent) none Gossypium raimondii B456_011G010000 R-GRA-1123745-2 B456_011G010000 [endoplasmic reticulum membrane] R-GRA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119260 Cardiolipin biosynthesis none Gossypium raimondii B456_011G010000 R-GRA-1123745-2 B456_011G010000 [endoplasmic reticulum membrane] R-GRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119402 Phospholipid biosynthesis I none Gossypium raimondii B456_011G011200 R-GRA-8933714-2 B456_011G011200 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_011G012100 R-GRA-9611549-2 phospho-phosphorylated-CERK1 [plasma membrane] R-GRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Gossypium raimondii B456_011G013800 R-GRA-1127243-2 B456_011G013800 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_011G013800 R-GRA-9918268-2 soluble Starch Synthase (SSIIIA/SSIII-2) [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_011G017000 R-GRA-1128069-2 B456_011G017000 [cytosol] R-GRA-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Gossypium raimondii B456_011G017000 R-GRA-1128069-2 B456_011G017000 [cytosol] R-GRA-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Gossypium raimondii B456_011G022500 R-GRA-9025487 B456_011G022500 [cytosol] R-GRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119325 Sphingolipid metabolism none Gossypium raimondii B456_011G026100 R-GRA-8879004 B456_011G026100 [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_011G026500 R-GRA-9025541-2 B456_011G026500 [endoplasmic reticulum membrane] R-GRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119325 Sphingolipid metabolism none Gossypium raimondii B456_011G026800 R-GRA-9025224 B456_011G026800 [endoplasmic reticulum lumen] R-GRA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119502 Allantoin degradation none Gossypium raimondii B456_011G029400 R-GRA-9035727-2 B456_011G029400 [cytosol] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_011G029400 R-GRA-9035692-2 B456_011G029400 [nucleoplasm] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_011G030900 R-GRA-5608184-2 B456_011G030900 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_011G030900 R-GRA-5608184-2 B456_011G030900 [nucleoplasm] R-GRA-9675304 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675304 Lateral root emergence none Gossypium raimondii B456_011G033400 R-GRA-9025294-3 B456_011G033400 [cytosol] R-GRA-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119267 Phenylalanine degradation III none Gossypium raimondii B456_011G033400 R-GRA-1124944-3 B456_011G033400 [plastid stroma] R-GRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119460 Isoleucine biosynthesis from threonine none Gossypium raimondii B456_011G033400 R-GRA-1127774-3 B456_011G033400 [cytosol] R-GRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119460 Isoleucine biosynthesis from threonine none Gossypium raimondii B456_011G033400 R-GRA-1124944-3 B456_011G033400 [plastid stroma] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_011G033400 R-GRA-1127774-3 B456_011G033400 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_011G033400 R-GRA-1124944-3 B456_011G033400 [plastid stroma] R-GRA-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119502 Allantoin degradation none Gossypium raimondii B456_011G033400 R-GRA-1124944-3 B456_011G033400 [plastid stroma] R-GRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119600 Valine biosynthesis none Gossypium raimondii B456_011G033400 R-GRA-1127774-3 B456_011G033400 [cytosol] R-GRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119600 Valine biosynthesis none Gossypium raimondii B456_011G035800 R-GRA-9618197 B456_011G035800 [plasma membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_011G036300 R-GRA-5632315-2 B456_011G036300 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_011G036300 R-GRA-5632284-2 phospho-B456_011G036300 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_011G036300 R-GRA-5632342-2 phospho-B456_011G036300 [cytosol] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_011G036300 R-GRA-5632315-2 B456_011G036300 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_011G037900 R-GRA-1124491-2 B456_011G037900 [plasma membrane] R-GRA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119314 Cellulose biosynthesis none Gossypium raimondii B456_011G039300 R-GRA-5654840-3 B456_011G039300 [nucleoplasm] R-GRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654828 Strigolactone signaling none Gossypium raimondii B456_011G039300 R-GRA-5654840-3 B456_011G039300 [nucleoplasm] R-GRA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Gossypium raimondii B456_011G041700 R-GRA-1129175-2 B456_011G041700 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_011G042400 R-GRA-9640767 B456_011G042400 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_011G042400 R-GRA-9640767 B456_011G042400 [nucleoplasm] R-GRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675824 DNA replication Initiation none Gossypium raimondii B456_011G043500 R-GRA-4415060-2 B456_011G043500 [plasma membrane] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_011G043500 R-GRA-4415065-2 phospho-B456_011G043500 [plasma membrane] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_011G045200 R-GRA-5221144-2 B456_011G045200 [plastid] R-GRA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119374 Abscisic acid biosynthesis none Gossypium raimondii B456_011G046000 R-GRA-9826635-2 PCF8 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_011G048300 R-GRA-1122605 B456_011G048300 [cytosol] R-GRA-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119341 Galactosylcyclitol biosynthesis none Gossypium raimondii B456_011G050200 R-GRA-6788026-2 B456_011G050200 [cytosol] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_011G053700 R-GRA-1125406-3 B456_011G053700 [cytosol] R-GRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119418 Suberin biosynthesis none Gossypium raimondii B456_011G060400 R-GRA-1123433-2 B456_011G060400 [cytosol] R-GRA-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119332 Jasmonic acid biosynthesis none Gossypium raimondii B456_011G060400 R-GRA-1123433-2 B456_011G060400 [cytosol] R-GRA-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119618 13-LOX and 13-HPL pathway none Gossypium raimondii B456_011G062200 R-GRA-1130222-4 B456_011G062200 [cytosol] R-GRA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119596 Glutamate biosynthesis I none Gossypium raimondii B456_011G062400 R-GRA-1130222-3 B456_011G062400 [cytosol] R-GRA-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119596 Glutamate biosynthesis I none Gossypium raimondii B456_011G062900 R-GRA-1130059-2 B456_011G062900 [cytosol] R-GRA-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119262 Threonine biosynthesis from homoserine none Gossypium raimondii B456_011G064700 R-GRA-5679376 B456_011G064700 [nucleoplasm] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_011G068400 R-GRA-2685730 B456_011G068400 [cytosol] R-GRA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119580 IAA biosynthesis II none Gossypium raimondii B456_011G069500 R-GRA-1127523 B456_011G069500 [cytosol] R-GRA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Gossypium raimondii B456_011G070800 R-GRA-1125997-3 B456_011G070800 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_011G070800 R-GRA-1125997-3 B456_011G070800 [nucleoplasm] R-GRA-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030680 Crown root development none Gossypium raimondii B456_011G081500 R-GRA-9675849-2 B456_011G081500 [nucleoplasm] R-GRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675824 DNA replication Initiation none Gossypium raimondii B456_011G083000 R-GRA-1125906-2 B456_011G083000 [cytosol] R-GRA-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119276 Choline biosynthesis III none Gossypium raimondii B456_011G088800 R-GRA-1127873 B456_011G088800 [plastid stroma] R-GRA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119424 Plastid glycolysis none Gossypium raimondii B456_011G088800 R-GRA-1127873 B456_011G088800 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_011G090100 R-GRA-1127353 B456_011G090100 [cytosol] R-GRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119506 tyrosine degradation I none Gossypium raimondii B456_011G091100 R-GRA-1125309 B456_011G091100 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_011G091200 R-GRA-9025513-3 B456_011G091200 [endoplasmic reticulum membrane] R-GRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119325 Sphingolipid metabolism none Gossypium raimondii B456_011G091200 R-GRA-1129700-3 B456_011G091200 [cytosol] R-GRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119610 Biotin biosynthesis II none Gossypium raimondii B456_011G091700 R-GRA-1124138 B456_011G091700 [cytosol] R-GRA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119394 Pantothenate and coenzyme A biosynthesis III none Gossypium raimondii B456_011G091900 R-GRA-1124905-2 B456_011G091900 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_011G098100 R-GRA-9618156-2 B456_011G098100 [plasma membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_011G099800 R-GRA-1128613-2 B456_011G099800 [cytosol] R-GRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119316 Phenylpropanoid biosynthesis none Gossypium raimondii B456_011G100700 R-GRA-9639957-2 B456_011G100700 [plasma membrane] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_011G106700 R-GRA-9640671 B456_011G106700 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_011G106700 R-GRA-9640671 B456_011G106700 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_011G108300 R-GRA-9658611-2 B456_011G108300 [plastid stroma] R-GRA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119263 Arginine biosynthesis none Gossypium raimondii B456_011G108300 R-GRA-9658611-2 B456_011G108300 [plastid stroma] R-GRA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119539 Ornithine biosynthesis none Gossypium raimondii B456_011G108300 R-GRA-9658611-2 B456_011G108300 [plastid stroma] R-GRA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119622 Arginine biosynthesis II (acetyl cycle) none Gossypium raimondii B456_011G108400 R-GRA-9035593-4 B456_011G108400 [cytosol] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_011G108400 R-GRA-9035634-4 B456_011G108400 [nucleoplasm] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_011G108400 R-GRA-9035593-4 B456_011G108400 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_011G108400 R-GRA-9035634-4 B456_011G108400 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_011G108700 R-GRA-1123895-7 B456_011G108700 [cytosol] R-GRA-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119334 Ethylene biosynthesis from methionine none Gossypium raimondii B456_011G108700 R-GRA-1123895-7 B456_011G108700 [cytosol] R-GRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119624 Methionine salvage pathway none Gossypium raimondii B456_011G109400 R-GRA-1126269-3 B456_011G109400 [mitochondrial matrix] R-GRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119479 Valine degradation none Gossypium raimondii B456_011G110900 R-GRA-9826680-6 B456_011G110900 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_011G111400 R-GRA-1128950-3 B456_011G111400 [cytosol] R-GRA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119379 Flavin biosynthesis none Gossypium raimondii B456_011G112800 R-GRA-1129082-2 B456_011G112800 [mitochondrial matrix] R-GRA-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119445 Beta-alanine biosynthesis II none Gossypium raimondii B456_011G126000 R-GRA-8868904 B456_011G126000 [endoplasmic reticulum membrane] R-GRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8868949 Intracellular auxin transport none Gossypium raimondii B456_011G130200 R-GRA-1129539-2 B456_011G130200 [cytosol] R-GRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119610 Biotin biosynthesis II none Gossypium raimondii B456_011G132600 R-GRA-9639789-4 B456_011G132600 [plasma membrane] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_011G132800 R-GRA-9675391-2 B456_011G132800 [nucleoplasm] R-GRA-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675508 Root elongation none Gossypium raimondii B456_011G143200 R-GRA-9675297 B456_011G143200 [mitochondrion] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_011G144000 R-GRA-9927723 B456_011G144000 [nucleoplasm] R-GRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934036 Long day regulated expression of florigens none Gossypium raimondii B456_011G145600 R-GRA-1127173-2 B456_011G145600 [cytosol] R-GRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119540 Leucine biosynthesis none Gossypium raimondii B456_011G147200 R-GRA-1123482-2 B456_011G147200 [plastid stroma] R-GRA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119367 Polyisoprenoid biosynthesis none Gossypium raimondii B456_011G151600 R-GRA-8879029-4 DREB1G [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_011G151600 R-GRA-8879085-4 B456_011G151600 [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_011G153500 R-GRA-1129921-2 B456_011G153500 [cytosol] R-GRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119428 GDP-D-rhamnose biosynthesis none Gossypium raimondii B456_011G153500 R-GRA-1129921-2 B456_011G153500 [cytosol] R-GRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Gossypium raimondii B456_011G155900 R-GRA-1124348 B456_011G155900 [cytosol] R-GRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119465 Sucrose biosynthesis none Gossypium raimondii B456_011G157400 R-GRA-1126395-10 B456_011G157400 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_011G160200 R-GRA-1129113 B456_011G160200 [cytosol] R-GRA-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119298 Glutathione redox reactions II none Gossypium raimondii B456_011G160200 R-GRA-1129113 B456_011G160200 [cytosol] R-GRA-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119437 Glutathione redox reactions I none Gossypium raimondii B456_011G1614001 R-GRA-1127733-2 B456_011G1614001 [cytosol] R-GRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119460 Isoleucine biosynthesis from threonine none Gossypium raimondii B456_011G1614001 R-GRA-1127733-2 B456_011G1614001 [cytosol] R-GRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119600 Valine biosynthesis none Gossypium raimondii B456_011G166800 R-GRA-3321270-4 B456_011G166800 [chloroplast inner membrane] R-GRA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119287 Vitamin E biosynthesis none Gossypium raimondii B456_011G168400 R-GRA-9924379-4 HSFA2D [nucleoplasm] R-GRA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924451 Shoot (tiller) formation and regulation of tiller angle none Gossypium raimondii B456_011G173900 R-GRA-8879002 B456_011G173900 [nucleoplasm] R-GRA-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8879007 Response to cold temperature none Gossypium raimondii B456_011G175300 R-GRA-5632268-3 B456_011G175300 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_011G180100 R-GRA-1128385-2 B456_011G180100 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_011G184200 R-GRA-4723654 B456_011G184200 [plastid stroma] R-GRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119464 Methylerythritol phosphate pathway none Gossypium raimondii B456_011G184200 R-GRA-1130030 B456_011G184200 [cytosol] R-GRA-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119594 Pyridoxal 5'-phosphate biosynthesis none Gossypium raimondii B456_011G184200 R-GRA-1130030 B456_011G184200 [cytosol] R-GRA-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119629 Thiamine biosynthesis none Gossypium raimondii B456_011G194100 R-GRA-5632301-3 B456_011G194100 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_011G194100 R-GRA-5632301-3 B456_011G194100 [nucleoplasm] R-GRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654828 Strigolactone signaling none Gossypium raimondii B456_011G194100 R-GRA-5632301-3 B456_011G194100 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_011G200200 R-GRA-8933856 B456_011G200200 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_011G200200 R-GRA-8933748 B456_011G200200 [cytosol] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_011G200200 R-GRA-8933856 B456_011G200200 [nucleoplasm] R-GRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934036 Long day regulated expression of florigens none Gossypium raimondii B456_011G200200 R-GRA-8933856 B456_011G200200 [nucleoplasm] R-GRA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928995 Drought escape (DE) via ABA-dependent pathway none Gossypium raimondii B456_011G201500 R-GRA-9675790 B456_011G201500 [nucleoplasm] R-GRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675824 DNA replication Initiation none Gossypium raimondii B456_011G205800 R-GRA-9675857-2 B456_011G205800 [nucleoplasm] R-GRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675782 Maturation none Gossypium raimondii B456_011G207000 R-GRA-1127076 B456_011G207000 [cytosol] R-GRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119418 Suberin biosynthesis none Gossypium raimondii B456_011G207000 R-GRA-1127076 B456_011G207000 [cytosol] R-GRA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119582 Phenylpropanoid biosynthesis, initial reactions none Gossypium raimondii B456_011G207900 R-GRA-1129811-2 B456_011G207900 [mitochondrion] R-GRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119403 Removal of superoxide radicals none Gossypium raimondii B456_011G211000 R-GRA-1128973 B456_011G211000 [cytosol] R-GRA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Gossypium raimondii B456_011G211000 R-GRA-1128973 B456_011G211000 [cytosol] R-GRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119438 Secologanin and strictosidine biosynthesis none Gossypium raimondii B456_011G211000 R-GRA-1128973 B456_011G211000 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_011G211200 R-GRA-1128973-2 B456_011G211200 [cytosol] R-GRA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Gossypium raimondii B456_011G211200 R-GRA-1128973-2 B456_011G211200 [cytosol] R-GRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119438 Secologanin and strictosidine biosynthesis none Gossypium raimondii B456_011G211200 R-GRA-1128973-2 B456_011G211200 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_011G217200 R-GRA-6788172-4 B456_011G217200 [nucleoplasm] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_011G220300 R-GRA-9639211 B456_011G220300 [plant-type vacuole membrane] R-GRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639136 Response to Aluminum stress none Gossypium raimondii B456_011G221600 R-GRA-8854108-2 B456_011G221600 [cytosol] R-GRA-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119556 Choline biosynthesis I none Gossypium raimondii B456_011G224600 R-GRA-9639010 B456_011G224600 [cytosol] R-GRA-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119434 Phytic acid biosynthesis (lipid-independent) none Gossypium raimondii B456_011G226900 R-GRA-1127467-3 B456_011G226900 [cytosol] R-GRA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119456 Brassinosteroid biosynthesis II none Gossypium raimondii B456_011G227000 R-GRA-1127467-2 B456_011G227000 [cytosol] R-GRA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119456 Brassinosteroid biosynthesis II none Gossypium raimondii B456_011G232300 R-GRA-1126395-9 B456_011G232300 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_011G232500 R-GRA-1126395-8 B456_011G232500 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_011G232600 R-GRA-1126395-6 B456_011G232600 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_011G232700 R-GRA-1126395-11 B456_011G232700 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_011G232800 R-GRA-1126395 B456_011G232800 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_011G232900 R-GRA-1126395-3 B456_011G232900 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_011G234700 R-GRA-8868866-4 B456_011G234700 [endoplasmic reticulum membrane] R-GRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8868949 Intracellular auxin transport none Gossypium raimondii B456_011G238400 R-GRA-1130235-6 B456_011G238400 [cytosol] R-GRA-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119261 Salicylate biosynthesis none Gossypium raimondii B456_011G238400 R-GRA-1130235-6 B456_011G238400 [cytosol] R-GRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119418 Suberin biosynthesis none Gossypium raimondii B456_011G238400 R-GRA-1130235-6 B456_011G238400 [cytosol] R-GRA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119582 Phenylpropanoid biosynthesis, initial reactions none Gossypium raimondii B456_011G238900 R-GRA-5608161-5 B456_011G238900 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_011G239000 R-GRA-9918201 B456_011G239000 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_011G240100 R-GRA-1130456 B456_011G240100 [plastid stroma] R-GRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119430 Chorismate biosynthesis none Gossypium raimondii B456_011G240200 R-GRA-1130456-3 B456_011G240200 [plastid stroma] R-GRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119430 Chorismate biosynthesis none Gossypium raimondii B456_011G241700 R-GRA-9608682-2 B456_011G241700 [nucleoplasm] R-GRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934036 Long day regulated expression of florigens none Gossypium raimondii B456_011G241700 R-GRA-9608682-2 B456_011G241700 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_011G241700 R-GRA-9608606-2 B456_011G241700 [cytosol] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_011G255300 R-GRA-1129818-3 B456_011G255300 [mitochondrial matrix] R-GRA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119365 Lysine degradation II none Gossypium raimondii B456_011G255300 R-GRA-1173242-3 B456_011G255300 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_011G256100 R-GRA-1126799-2 B456_011G256100 [cytosol] R-GRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119428 GDP-D-rhamnose biosynthesis none Gossypium raimondii B456_011G256100 R-GRA-1126799-2 B456_011G256100 [cytosol] R-GRA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119563 UDP-D-xylose biosynthesis none Gossypium raimondii B456_011G256100 R-GRA-1126799-2 B456_011G256100 [cytosol] R-GRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Gossypium raimondii B456_011G260500 R-GRA-1125877-2 B456_011G260500 [cytosol] R-GRA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119456 Brassinosteroid biosynthesis II none Gossypium raimondii B456_011G261500 R-GRA-9675820 B456_011G261500 [nucleoplasm] R-GRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675824 DNA replication Initiation none Gossypium raimondii B456_011G261700 R-GRA-5149632-4 B456_011G261700 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_011G263400 R-GRA-9025728 B456_011G263400 [plasma membrane] R-GRA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9025727 Iron uptake and transport in root vascular system none Gossypium raimondii B456_011G264400 R-GRA-9025728-2 B456_011G264400 [plasma membrane] R-GRA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9025727 Iron uptake and transport in root vascular system none Gossypium raimondii B456_011G268200 R-GRA-4415078-4 B456_011G268200 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_011G269100 R-GRA-1130202-2 B456_011G269100 [cytosol] R-GRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119410 Ascorbate biosynthesis none Gossypium raimondii B456_011G269400 R-GRA-9930180-4 OsNAC3 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_011G269500 R-GRA-9930180-5 OsNAC3 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_011G271500 R-GRA-9930180-3 OsNAC3 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_011G274700 R-GRA-1123470-3 B456_011G274700 [cytosol] R-GRA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119292 Cytokinins 7-N-glucoside biosynthesis none Gossypium raimondii B456_011G274700 R-GRA-1123470-3 B456_011G274700 [cytosol] R-GRA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119375 Cytokinins 9-N-glucoside biosynthesis none Gossypium raimondii B456_011G274700 R-GRA-1123470-3 B456_011G274700 [cytosol] R-GRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119473 Cytokinins-O-glucoside biosynthesis none Gossypium raimondii B456_011G279000 R-GRA-9681885-3 B456_011G279000 [Golgi membrane] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_011G279400 R-GRA-5149683 B456_011G279400 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_011G279900 R-GRA-6787181 B456_011G279900 [cytosol] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_011G283900 R-GRA-8858070-3 B456_011G283900 [plasma membrane] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_011G289100 R-GRA-5654797-2 B456_011G289100 [nucleoplasm] R-GRA-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654828 Strigolactone signaling none Gossypium raimondii B456_011G289500 R-GRA-1129723-2 B456_011G289500 [chloroplast] R-GRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119494 Tryptophan biosynthesis none Gossypium raimondii B456_011G289600 R-GRA-1129616 B456_011G289600 [cytosol] R-GRA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119300 Glycolipid desaturation none Gossypium raimondii B456_011G293600 R-GRA-1125093 B456_011G293600 [cytosol] R-GRA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119456 Brassinosteroid biosynthesis II none Gossypium raimondii B456_011G295500 R-GRA-9930304 ACA7 [plasma membrane] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_011G2959002 R-GRA-5632319 phospho-B456_011G2959002 [plasma membrane] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_012G001000 R-GRA-8933784-2 B456_012G001000 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_012G001500 R-GRA-2685732 B456_012G001500 [cytosol] R-GRA-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119580 IAA biosynthesis II none Gossypium raimondii B456_012G002300 R-GRA-1128586-2 B456_012G002300 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_012G004800 R-GRA-5608161-6 B456_012G004800 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_012G005900 R-GRA-1125631 B456_012G005900 [cytosol] R-GRA-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119321 Glycerol degradation I none Gossypium raimondii B456_012G009000 R-GRA-9675269 B456_012G009000 [nucleoplasm] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_012G009900 R-GRA-5632143 B456_012G009900 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_012G009900 R-GRA-5632143 B456_012G009900 [nucleoplasm] R-GRA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924451 Shoot (tiller) formation and regulation of tiller angle none Gossypium raimondii B456_012G012600 R-GRA-9924543 CYP714D1/EUI1 [endoplasmic reticulum membrane] R-GRA-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Gossypium raimondii B456_012G015900 R-GRA-9675399-2 B456_012G015900 [nucleoplasm] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_012G017900 R-GRA-1126542 B456_012G017900 [cytosol] R-GRA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119523 Tetrahydrofolate biosynthesis II none Gossypium raimondii B456_012G017900 R-GRA-1126542 B456_012G017900 [cytosol] R-GRA-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119617 Folate polyglutamylation I none Gossypium raimondii B456_012G019100 R-GRA-9640763-2 B456_012G019100 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_012G019100 R-GRA-9640885-2 phospho-B456_012G019100 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_012G019200 R-GRA-9640763 B456_012G019200 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_012G019200 R-GRA-9640885 phospho-B456_012G019200 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_012G019800 R-GRA-1124453 B456_012G019800 [peroxisomal matrix] R-GRA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119407 Ureide biosynthesis none Gossypium raimondii B456_012G022300 R-GRA-9916302-2 B456_012G022300 [nucleoplasm] R-GRA-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934036 Long day regulated expression of florigens none Gossypium raimondii B456_012G022300 R-GRA-9916302-2 B456_012G022300 [nucleoplasm] R-GRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9916190 Root angle formation: elongation and curvature response none Gossypium raimondii B456_012G023000 R-GRA-9675803 B456_012G023000 [nucleoplasm] R-GRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675815 Leading strand synthesis none Gossypium raimondii B456_012G024200 R-GRA-1122936-5 B456_012G024200 [cytosol] R-GRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119452 Galactose degradation II none Gossypium raimondii B456_012G029000 R-GRA-8858112 B456_012G029000 [plasma membrane] R-GRA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8858053 Polar auxin transport none Gossypium raimondii B456_012G036000 R-GRA-9611889 B456_012G036000 [mitochondrial matrix] R-GRA-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119479 Valine degradation none Gossypium raimondii B456_012G038100 R-GRA-6788234 B456_012G038100 [cytosol] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_012G038100 R-GRA-1124041 B456_012G038100 [nucleoplasm] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_012G038700 R-GRA-9639171 B456_012G038700 [plant-type vacuole membrane] R-GRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639136 Response to Aluminum stress none Gossypium raimondii B456_012G041300 R-GRA-1123092 B456_012G041300 [cytosol] R-GRA-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119278 PRPP biosynthesis I none Gossypium raimondii B456_012G041700 R-GRA-8853988 Phosphatidylglycerophosphatase [mitochondrial matrix] R-GRA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119260 Cardiolipin biosynthesis none Gossypium raimondii B456_012G042300 R-GRA-1125259 B456_012G042300 [cytosol] R-GRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119428 GDP-D-rhamnose biosynthesis none Gossypium raimondii B456_012G042300 R-GRA-1125259 B456_012G042300 [cytosol] R-GRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Gossypium raimondii B456_012G056200 R-GRA-8858063 B456_012G056200 [plasma membrane] R-GRA-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8858053 Polar auxin transport none Gossypium raimondii B456_012G061900 R-GRA-1130327-8 B456_012G061900 [cytosol] R-GRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119586 Cyanate degradation none Gossypium raimondii B456_012G063500 R-GRA-1127752 B456_012G063500 [cytosol] R-GRA-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119417 Stachyose biosynthesis none Gossypium raimondii B456_012G066600 R-GRA-9025351-2 B456_012G066600 [cytosol] R-GRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119402 Phospholipid biosynthesis I none Gossypium raimondii B456_012G069400 R-GRA-1129818 B456_012G069400 [mitochondrial matrix] R-GRA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119365 Lysine degradation II none Gossypium raimondii B456_012G069400 R-GRA-1173242 B456_012G069400 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_012G069500 R-GRA-1129818-2 B456_012G069500 [mitochondrial matrix] R-GRA-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119365 Lysine degradation II none Gossypium raimondii B456_012G069500 R-GRA-1173242-2 B456_012G069500 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_012G070000 R-GRA-1126799 B456_012G070000 [cytosol] R-GRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119428 GDP-D-rhamnose biosynthesis none Gossypium raimondii B456_012G070000 R-GRA-1126799 B456_012G070000 [cytosol] R-GRA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119563 UDP-D-xylose biosynthesis none Gossypium raimondii B456_012G070000 R-GRA-1126799 B456_012G070000 [cytosol] R-GRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Gossypium raimondii B456_012G070200 R-GRA-1125877 B456_012G070200 [cytosol] R-GRA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119456 Brassinosteroid biosynthesis II none Gossypium raimondii B456_012G071000 R-GRA-9684723-3 B456_012G071000 [cytosol] R-GRA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9609102 Flower development none Gossypium raimondii B456_012G072200 R-GRA-4415078-2 B456_012G072200 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_012G072800 R-GRA-1130202-3 B456_012G072800 [cytosol] R-GRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119410 Ascorbate biosynthesis none Gossypium raimondii B456_012G073400 R-GRA-9930180 OsNAC3 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_012G073900 R-GRA-1123470-6 B456_012G073900 [cytosol] R-GRA-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119292 Cytokinins 7-N-glucoside biosynthesis none Gossypium raimondii B456_012G073900 R-GRA-1123470-6 B456_012G073900 [cytosol] R-GRA-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119375 Cytokinins 9-N-glucoside biosynthesis none Gossypium raimondii B456_012G073900 R-GRA-1123470-6 B456_012G073900 [cytosol] R-GRA-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119473 Cytokinins-O-glucoside biosynthesis none Gossypium raimondii B456_012G074900 R-GRA-9681885-5 B456_012G074900 [Golgi membrane] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_012G075000 R-GRA-9640689 B456_012G075000 [nucleoplasm] R-GRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675782 Maturation none Gossypium raimondii B456_012G075000 R-GRA-9640689 B456_012G075000 [nucleoplasm] R-GRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675815 Leading strand synthesis none Gossypium raimondii B456_012G075000 R-GRA-9640689 B456_012G075000 [nucleoplasm] R-GRA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675885 Lagging strand synthesis none Gossypium raimondii B456_012G075700 R-GRA-6787181-2 B456_012G075700 [cytosol] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_012G076100 R-GRA-8858070 B456_012G076100 [plasma membrane] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_012G081300 R-GRA-5146760 B456_012G081300 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_012G081700 R-GRA-9675878 B456_012G081700 [nucleoplasm] R-GRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675782 Maturation none Gossypium raimondii B456_012G081900 R-GRA-1124520 B456_012G081900 [cytosol] R-GRA-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119278 PRPP biosynthesis I none Gossypium raimondii B456_012G083400 R-GRA-1125182-2 B456_012G083400 [plastid stroma] R-GRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119430 Chorismate biosynthesis none Gossypium raimondii B456_012G088500 R-GRA-9025500 B456_012G088500 [endoplasmic reticulum membrane] R-GRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119325 Sphingolipid metabolism none Gossypium raimondii B456_012G089500 R-GRA-1122785-4 B456_012G089500 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_012G089500 R-GRA-1126726-4 B456_012G089500 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_012G089500 R-GRA-1122785-4 B456_012G089500 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_012G089500 R-GRA-1126726-4 B456_012G089500 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_012G089500 R-GRA-1122785-4 B456_012G089500 [cytosol] R-GRA-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119570 Cytosolic glycolysis none Gossypium raimondii B456_012G091400 R-GRA-1122601-2 B456_012G091400 [mitochondrial inner membrane] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_012G092300 R-GRA-1130032-2 B456_012G092300 [mitochondrial inner membrane] R-GRA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119260 Cardiolipin biosynthesis none Gossypium raimondii B456_012G096800 R-GRA-1129203-3 B456_012G096800 [cytosol] R-GRA-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119428 GDP-D-rhamnose biosynthesis none Gossypium raimondii B456_012G096800 R-GRA-1129203-3 B456_012G096800 [cytosol] R-GRA-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Gossypium raimondii B456_012G1014001 R-GRA-9675876-2 B456_012G1014001 [nucleoplasm] R-GRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675782 Maturation none Gossypium raimondii B456_012G1014001 R-GRA-9675876-2 B456_012G1014001 [nucleoplasm] R-GRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675815 Leading strand synthesis none Gossypium raimondii B456_012G1014001 R-GRA-9675876-2 B456_012G1014001 [nucleoplasm] R-GRA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675885 Lagging strand synthesis none Gossypium raimondii B456_012G1014002 R-GRA-9675876 B456_012G1014002 [nucleoplasm] R-GRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675782 Maturation none Gossypium raimondii B456_012G1014002 R-GRA-9675876 B456_012G1014002 [nucleoplasm] R-GRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675815 Leading strand synthesis none Gossypium raimondii B456_012G1014002 R-GRA-9675876 B456_012G1014002 [nucleoplasm] R-GRA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675885 Lagging strand synthesis none Gossypium raimondii B456_012G104800 R-GRA-9766887 B456_012G104800 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_012G106900 R-GRA-1130202 B456_012G106900 [cytosol] R-GRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119410 Ascorbate biosynthesis none Gossypium raimondii B456_012G107700 R-GRA-1127913-3 B456_012G107700 [cytosol] R-GRA-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119495 Citrulline biosynthesis none Gossypium raimondii B456_012G107700 R-GRA-1127913-3 B456_012G107700 [cytosol] R-GRA-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119631 Proline biosynthesis I none Gossypium raimondii B456_012G111500 R-GRA-1124269 B456_012G111500 [cytosol] R-GRA-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119456 Brassinosteroid biosynthesis II none Gossypium raimondii B456_012G111700 R-GRA-8986695 B456_012G111700 [endoplasmic reticulum membrane] R-GRA-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8986768 Anther and pollen development none Gossypium raimondii B456_012G114600 R-GRA-9916309-2 CPK3 [plasma membrane] R-GRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9916190 Root angle formation: elongation and curvature response none Gossypium raimondii B456_012G115000 R-GRA-1129616-3 B456_012G115000 [cytosol] R-GRA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119300 Glycolipid desaturation none Gossypium raimondii B456_012G116000 R-GRA-1124190 B456_012G116000 [plastid stroma] R-GRA-1119412 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119412 Chlorophyll a biosynthesis I none Gossypium raimondii B456_012G116600 R-GRA-1129723 B456_012G116600 [chloroplast] R-GRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119494 Tryptophan biosynthesis none Gossypium raimondii B456_012G119100 R-GRA-6788042 B456_012G119100 [nucleoplasm] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_012G119800 R-GRA-1124234 B456_012G119800 [cytosol] R-GRA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119436 Peptidoglycan biosynthesis I none Gossypium raimondii B456_012G120200 R-GRA-5632120-3 B456_012G120200 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_012G125700 R-GRA-9930242-3 B456_012G125700 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_012G134300 R-GRA-4827041-2 B456_012G134300 [plastid stroma] R-GRA-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-4827054 Tetrapyrrole biosynthesis I none Gossypium raimondii B456_012G135400 R-GRA-1125587 B456_012G135400 [cytosol] R-GRA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119379 Flavin biosynthesis none Gossypium raimondii B456_012G136400 R-GRA-5632121 B456_012G136400 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_012G137200 R-GRA-1124032 B456_012G137200 [cytosol] R-GRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119540 Leucine biosynthesis none Gossypium raimondii B456_012G137800 R-GRA-1127820 B456_012G137800 [plasma membrane] R-GRA-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119314 Cellulose biosynthesis none Gossypium raimondii B456_012G138000 R-GRA-9826666-2 B456_012G138000 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_012G138100 R-GRA-1124496 B456_012G138100 [cytosol] R-GRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119615 Mevalonate pathway none Gossypium raimondii B456_012G138900 R-GRA-5221147-2 B456_012G138900 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_012G139500 R-GRA-1125910-2 B456_012G139500 [plastid stroma] R-GRA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119367 Polyisoprenoid biosynthesis none Gossypium raimondii B456_012G139600 R-GRA-1125910-4 B456_012G139600 [plastid stroma] R-GRA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119367 Polyisoprenoid biosynthesis none Gossypium raimondii B456_012G140800 R-GRA-1127443 B456_012G140800 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_012G140800 R-GRA-1122818 B456_012G140800 [cytosol] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_012G141600 R-GRA-1127625-2 B456_012G141600 [cytosol] R-GRA-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119265 Tetrahydrofolate biosynthesis I none Gossypium raimondii B456_012G141600 R-GRA-1127625-2 B456_012G141600 [cytosol] R-GRA-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119523 Tetrahydrofolate biosynthesis II none Gossypium raimondii B456_012G143000 R-GRA-1128950 B456_012G143000 [cytosol] R-GRA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119379 Flavin biosynthesis none Gossypium raimondii B456_012G146500 R-GRA-9675274-2 B456_012G146500 [nucleoplasm] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_012G149300 R-GRA-9640671-3 B456_012G149300 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_012G149300 R-GRA-9640671-3 B456_012G149300 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_012G149900 R-GRA-9920344-6 B456_012G149900 [nucleoplasm] R-GRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934108 Short day regulated expression of florigens none Gossypium raimondii B456_012G151600 R-GRA-8987574-2 B456_012G151600 [mitochondrial matrix] R-GRA-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119311 Glycine biosynthesis I none Gossypium raimondii B456_012G153100 R-GRA-9675293 B456_012G153100 [nucleoplasm] R-GRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030557 Lateral root initiation none Gossypium raimondii B456_012G153600 R-GRA-1128877-2 B456_012G153600 [plastid stroma] R-GRA-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119424 Plastid glycolysis none Gossypium raimondii B456_012G153600 R-GRA-1128877-2 B456_012G153600 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_012G154100 R-GRA-1123832 B456_012G154100 [cytosol] R-GRA-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119304 Putrescine biosynthesis II none Gossypium raimondii B456_012G154100 R-GRA-1123832 B456_012G154100 [cytosol] R-GRA-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119447 Putrescine biosynthesis I none Gossypium raimondii B456_012G154400 R-GRA-9826692-5 B456_012G154400 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_012G158300 R-GRA-1125494-2 B456_012G158300 [endoplasmic reticulum membrane] R-GRA-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119402 Phospholipid biosynthesis I none Gossypium raimondii B456_012G158700 R-GRA-1130141 B456_012G158700 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_012G158700 R-GRA-1130141 B456_012G158700 [mitochondrial matrix] R-GRA-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119540 Leucine biosynthesis none Gossypium raimondii B456_012G167100 R-GRA-1128263-2 B456_012G167100 [plastid stroma] R-GRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119509 Histidine biosynthesis I none Gossypium raimondii B456_012G171900 R-GRA-1123563 B456_012G171900 [cytosol] R-GRA-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119379 Flavin biosynthesis none Gossypium raimondii B456_012G1724003 R-GRA-1126549 B456_012G1724003 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_012G172600 R-GRA-1130162 B456_012G172600 [chloroplast] R-GRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119494 Tryptophan biosynthesis none Gossypium raimondii B456_012G172700 R-GRA-1127753 B456_012G172700 [cytosol] R-GRA-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119278 PRPP biosynthesis I none Gossypium raimondii B456_012G174400 R-GRA-5632129-5 B456_012G174400 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_012G1818002 R-GRA-1128632-3 B456_012G1818002 [cytosol] R-GRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119465 Sucrose biosynthesis none Gossypium raimondii B456_012G1818002 R-GRA-1128632-3 B456_012G1818002 [cytosol] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_012G1818003 R-GRA-1128632-2 B456_012G1818003 [cytosol] R-GRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119465 Sucrose biosynthesis none Gossypium raimondii B456_012G1818003 R-GRA-1128632-2 B456_012G1818003 [cytosol] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_013G000900 R-GRA-1126996-2 B456_013G000900 [cytosol] R-GRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119316 Phenylpropanoid biosynthesis none Gossypium raimondii B456_013G001700 R-GRA-6788172 B456_013G001700 [nucleoplasm] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_013G001800 R-GRA-9640785 B456_013G001800 [nucleoplasm] R-GRA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640882 Assembly of pre-replication complex none Gossypium raimondii B456_013G001800 R-GRA-9640785 B456_013G001800 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_013G002400 R-GRA-1122832 B456_013G002400 [plastid stroma] R-GRA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119449 Carotenoid biosynthesis none Gossypium raimondii B456_013G004400 R-GRA-6788172-2 B456_013G004400 [nucleoplasm] R-GRA-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6788019 Salicylic acid signaling none Gossypium raimondii B456_013G005300 R-GRA-9025728-4 B456_013G005300 [plasma membrane] R-GRA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9025727 Iron uptake and transport in root vascular system none Gossypium raimondii B456_013G005900 R-GRA-9675399-4 B456_013G005900 [nucleoplasm] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_013G012400 R-GRA-1126436 B456_013G012400 [cytosol] R-GRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119615 Mevalonate pathway none Gossypium raimondii B456_013G013700 R-GRA-1125766 B456_013G013700 [cytosol] R-GRA-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119557 GA12 biosynthesis none Gossypium raimondii B456_013G014100 R-GRA-8868866-6 B456_013G014100 [endoplasmic reticulum membrane] R-GRA-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8868949 Intracellular auxin transport none Gossypium raimondii B456_013G015600 R-GRA-1250417 B456_013G015600 [cytosol] R-GRA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119374 Abscisic acid biosynthesis none Gossypium raimondii B456_013G018900 R-GRA-8858070-2 B456_013G018900 [plasma membrane] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_013G019900 R-GRA-9681885-6 B456_013G019900 [Golgi membrane] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_013G022100 R-GRA-4415078-3 B456_013G022100 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_013G024000 R-GRA-1127455 B456_013G024000 [cytosol] R-GRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119460 Isoleucine biosynthesis from threonine none Gossypium raimondii B456_013G024000 R-GRA-1127455 B456_013G024000 [cytosol] R-GRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119600 Valine biosynthesis none Gossypium raimondii B456_013G024300 R-GRA-1130032 B456_013G024300 [mitochondrial inner membrane] R-GRA-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119260 Cardiolipin biosynthesis none Gossypium raimondii B456_013G028900 R-GRA-1125504 B456_013G028900 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_013G028900 R-GRA-1125504 B456_013G028900 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_013G028900 R-GRA-1125504 B456_013G028900 [cytosol] R-GRA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119295 Homoserine biosynthesis none Gossypium raimondii B456_013G028900 R-GRA-5606489 B456_013G028900 [plastid stroma] R-GRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119419 Lysine biosynthesis VI none Gossypium raimondii B456_013G030300 R-GRA-5654756-2 B456_013G030300 [cytosol] R-GRA-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119281 Aspartate biosynthesis I none Gossypium raimondii B456_013G030300 R-GRA-1123648-2 B456_013G030300 [plastid] R-GRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119506 tyrosine degradation I none Gossypium raimondii B456_013G030300 R-GRA-5631992-2 B456_013G030300 [plastid stroma] R-GRA-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119553 Asparagine biosynthesis none Gossypium raimondii B456_013G032100 R-GRA-1128637-3 B456_013G032100 [chloroplast] R-GRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119494 Tryptophan biosynthesis none Gossypium raimondii B456_013G032800 R-GRA-1128613-3 B456_013G032800 [cytosol] R-GRA-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119316 Phenylpropanoid biosynthesis none Gossypium raimondii B456_013G033400 R-GRA-9826692 B456_013G033400 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_013G033600 R-GRA-9640761 B456_013G033600 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_013G033600 R-GRA-9640761 B456_013G033600 [nucleoplasm] R-GRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675824 DNA replication Initiation none Gossypium raimondii B456_013G035500 R-GRA-1127738 B456_013G035500 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_013G035500 R-GRA-1127738 B456_013G035500 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_013G035500 R-GRA-5606514 B456_013G035500 [plastid stroma] R-GRA-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119419 Lysine biosynthesis VI none Gossypium raimondii B456_013G035800 R-GRA-1127562-2 B456_013G035800 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_013G035800 R-GRA-1130466-4 B456_013G035800 [cytosol] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_013G036100 R-GRA-1125698-2 B456_013G036100 [cytosol] R-GRA-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119436 Peptidoglycan biosynthesis I none Gossypium raimondii B456_013G038700 R-GRA-1125275 B456_013G038700 [cytosol] R-GRA-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119629 Thiamine biosynthesis none Gossypium raimondii B456_013G040500 R-GRA-5138500 B456_013G040500 [plastid stroma] R-GRA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119263 Arginine biosynthesis none Gossypium raimondii B456_013G040500 R-GRA-1129397 B456_013G040500 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_013G040500 R-GRA-1129397 B456_013G040500 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_013G040500 R-GRA-1129397 B456_013G040500 [cytosol] R-GRA-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119295 Homoserine biosynthesis none Gossypium raimondii B456_013G040500 R-GRA-5138500 B456_013G040500 [plastid stroma] R-GRA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119539 Ornithine biosynthesis none Gossypium raimondii B456_013G040500 R-GRA-5138500 B456_013G040500 [plastid stroma] R-GRA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119622 Arginine biosynthesis II (acetyl cycle) none Gossypium raimondii B456_013G042900 R-GRA-9025739-4 B456_013G042900 [plasma membrane] R-GRA-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9025727 Iron uptake and transport in root vascular system none Gossypium raimondii B456_013G042900 R-GRA-9025739-4 B456_013G042900 [plasma membrane] R-GRA-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9618218 Arsenic uptake and detoxification none Gossypium raimondii B456_013G042900 R-GRA-9025739-4 B456_013G042900 [plasma membrane] R-GRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639136 Response to Aluminum stress none Gossypium raimondii B456_013G043800 R-GRA-9025430-2 B456_013G043800 [endoplasmic reticulum membrane] R-GRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119325 Sphingolipid metabolism none Gossypium raimondii B456_013G044500 R-GRA-9928801-3 B456_013G044500 [nucleoplasm] R-GRA-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9928995 Drought escape (DE) via ABA-dependent pathway none Gossypium raimondii B456_013G045200 R-GRA-9920344-4 B456_013G045200 [nucleoplasm] R-GRA-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8934108 Short day regulated expression of florigens none Gossypium raimondii B456_013G046400 R-GRA-9640671-8 B456_013G046400 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_013G046400 R-GRA-9640671-8 B456_013G046400 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_013G051100 R-GRA-9639111-2 B456_013G051100 [plasma membrane] R-GRA-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639136 Response to Aluminum stress none Gossypium raimondii B456_013G051300 R-GRA-1125182 B456_013G051300 [plastid stroma] R-GRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119430 Chorismate biosynthesis none Gossypium raimondii B456_013G052300 R-GRA-1128745-2 B456_013G052300 [plastid stroma] R-GRA-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119464 Methylerythritol phosphate pathway none Gossypium raimondii B456_013G052700 R-GRA-9675274 B456_013G052700 [nucleoplasm] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_013G060200 R-GRA-1125832 B456_013G060200 [plastid stroma] R-GRA-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119430 Chorismate biosynthesis none Gossypium raimondii B456_013G064400 R-GRA-5221147-5 B456_013G064400 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_013G064500 R-GRA-5221147-3 B456_013G064500 [cytosol] R-GRA-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-3899351 Abscisic acid (ABA) mediated signaling none Gossypium raimondii B456_013G064800 R-GRA-1130152 B456_013G064800 [cytosol] R-GRA-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119394 Pantothenate and coenzyme A biosynthesis III none Gossypium raimondii B456_013G065200 R-GRA-1124496-3 B456_013G065200 [cytosol] R-GRA-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119615 Mevalonate pathway none Gossypium raimondii B456_013G068400 R-GRA-1129355 B456_013G068400 [plastid] R-GRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119403 Removal of superoxide radicals none Gossypium raimondii B456_013G068600 R-GRA-8933787-2 B456_013G068600 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_013G069200 R-GRA-1125237-2 B456_013G069200 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_013G075900 R-GRA-1129547 B456_013G075900 [cytosol] R-GRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119389 Phenylalanine biosynthesis I none Gossypium raimondii B456_013G075900 R-GRA-1129547 B456_013G075900 [cytosol] R-GRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119400 Methionine biosynthesis II none Gossypium raimondii B456_013G075900 R-GRA-1129547 B456_013G075900 [cytosol] R-GRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119506 tyrosine degradation I none Gossypium raimondii B456_013G080000 R-GRA-9826681-2 EREBP129 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_013G084700 R-GRA-9640752 B456_013G084700 [nucleoplasm] R-GRA-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640882 Assembly of pre-replication complex none Gossypium raimondii B456_013G084700 R-GRA-9640752 B456_013G084700 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_013G088600 R-GRA-5655076-2 B456_013G088600 [Golgi lumen] R-GRA-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5655101 Xyloglucan biosynthesis none Gossypium raimondii B456_013G090700 R-GRA-1126095-3 B456_013G090700 [cytosol] R-GRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119389 Phenylalanine biosynthesis I none Gossypium raimondii B456_013G092600 R-GRA-9681886 B456_013G092600 [cytosol] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_013G094600 R-GRA-6787262-2 B456_013G094600 [nucleoplasm] R-GRA-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-6787011 Jasmonic acid signaling none Gossypium raimondii B456_013G095500 R-GRA-9681895 B456_013G095500 [Golgi membrane] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_013G107700 R-GRA-9645941 B456_013G107700 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_013G108400 R-GRA-3240749-3 B456_013G108400 [cytosol] R-GRA-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Gossypium raimondii B456_013G108400 R-GRA-9681918-3 B456_013G108400 [cytosol] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_013G109800 R-GRA-1126875-2 B456_013G109800 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_013G114400 R-GRA-1125151-2 B456_013G114400 [cytosol] R-GRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119400 Methionine biosynthesis II none Gossypium raimondii B456_013G114400 R-GRA-1125151-2 B456_013G114400 [cytosol] R-GRA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119501 S-adenosyl-L-methionine cycle none Gossypium raimondii B456_013G116800 R-GRA-1124206-2 B456_013G116800 [cytosol] R-GRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119403 Removal of superoxide radicals none Gossypium raimondii B456_013G116800 R-GRA-1124206-2 B456_013G116800 [cytosol] R-GRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Gossypium raimondii B456_013G120800 R-GRA-9682506-2 B456_013G120800 [cytosol] R-GRA-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119410 Ascorbate biosynthesis none Gossypium raimondii B456_013G122000 R-GRA-1126794 B456_013G122000 [cytosol] R-GRA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119331 Cysteine biosynthesis I none Gossypium raimondii B456_013G127400 R-GRA-9640708-2 phospho-B456_013G127400 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_013G127400 R-GRA-9640770-2 B456_013G127400 [nucleoplasm] R-GRA-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640760 G1 phase none Gossypium raimondii B456_013G127400 R-GRA-9640708-2 phospho-B456_013G127400 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_013G129400 R-GRA-9826705-2 OSH71 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_013G131700 R-GRA-9675857 B456_013G131700 [nucleoplasm] R-GRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675782 Maturation none Gossypium raimondii B456_013G137000 R-GRA-9916305 B456_013G137000 [nucleoplasm] R-GRA-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9916190 Root angle formation: elongation and curvature response none Gossypium raimondii B456_013G137200 R-GRA-5138484 B456_013G137200 [plastid stroma] R-GRA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119263 Arginine biosynthesis none Gossypium raimondii B456_013G137200 R-GRA-5138484 B456_013G137200 [plastid stroma] R-GRA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119539 Ornithine biosynthesis none Gossypium raimondii B456_013G137200 R-GRA-5138484 B456_013G137200 [plastid stroma] R-GRA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119622 Arginine biosynthesis II (acetyl cycle) none Gossypium raimondii B456_013G139600 R-GRA-9675481 B456_013G139600 [cytosol] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_013G139800 R-GRA-1126830 B456_013G139800 [mitochondrial matrix] R-GRA-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119533 TCA cycle (plant) none Gossypium raimondii B456_013G141500 R-GRA-9609569 B456_013G141500 [cytosol] R-GRA-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9609573 Tricin biosynthesis none Gossypium raimondii B456_013G142500 R-GRA-1128626 B456_013G142500 [cytosol] R-GRA-1119581 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119581 Thiosulfate disproportionation III (rhodanese) none Gossypium raimondii B456_013G142500 R-GRA-1128626 B456_013G142500 [cytosol] R-GRA-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119612 Cysteine degradation none Gossypium raimondii B456_013G145100 R-GRA-1125341 B456_013G145100 [cytosol] R-GRA-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119460 Isoleucine biosynthesis from threonine none Gossypium raimondii B456_013G145100 R-GRA-1125341 B456_013G145100 [cytosol] R-GRA-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119600 Valine biosynthesis none Gossypium raimondii B456_013G145300 R-GRA-1128989 B456_013G145300 [plastid stroma] R-GRA-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119509 Histidine biosynthesis I none Gossypium raimondii B456_013G145400 R-GRA-1125920-2 B456_013G145400 [cytosol] R-GRA-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119273 Lysine biosynthesis I none Gossypium raimondii B456_013G145400 R-GRA-1125920-2 B456_013G145400 [cytosol] R-GRA-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119283 Lysine biosynthesis II none Gossypium raimondii B456_013G146800 R-GRA-9826597-2 B456_013G146800 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_013G150000 R-GRA-5149694 B456_013G150000 [plastid stroma] R-GRA-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119519 Calvin cycle none Gossypium raimondii B456_013G154200 R-GRA-1127723-2 B456_013G154200 [cytosol] R-GRA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119331 Cysteine biosynthesis I none Gossypium raimondii B456_013G157200 R-GRA-5632251 B456_013G157200 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_013G160900 R-GRA-9675807 B456_013G160900 [nucleoplasm] R-GRA-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675782 Maturation none Gossypium raimondii B456_013G160900 R-GRA-9675807 B456_013G160900 [nucleoplasm] R-GRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675815 Leading strand synthesis none Gossypium raimondii B456_013G160900 R-GRA-9675807 B456_013G160900 [nucleoplasm] R-GRA-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675885 Lagging strand synthesis none Gossypium raimondii B456_013G161300 R-GRA-1129867 B456_013G161300 [chloroplast] R-GRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119494 Tryptophan biosynthesis none Gossypium raimondii B456_013G161400 R-GRA-1129867-2 B456_013G161400 [chloroplast] R-GRA-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119494 Tryptophan biosynthesis none Gossypium raimondii B456_013G161500 R-GRA-9918175 B456_013G161500 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_013G169800 R-GRA-9035727 B456_013G169800 [cytosol] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_013G169800 R-GRA-9035692 B456_013G169800 [nucleoplasm] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_013G171600 R-GRA-1129547-3 B456_013G171600 [cytosol] R-GRA-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119389 Phenylalanine biosynthesis I none Gossypium raimondii B456_013G171600 R-GRA-1129547-3 B456_013G171600 [cytosol] R-GRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119400 Methionine biosynthesis II none Gossypium raimondii B456_013G171600 R-GRA-1129547-3 B456_013G171600 [cytosol] R-GRA-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119506 tyrosine degradation I none Gossypium raimondii B456_013G176100 R-GRA-1123482 B456_013G176100 [plastid stroma] R-GRA-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119367 Polyisoprenoid biosynthesis none Gossypium raimondii B456_013G177100 R-GRA-5221144-6 B456_013G177100 [plastid] R-GRA-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119374 Abscisic acid biosynthesis none Gossypium raimondii B456_013G180500 R-GRA-9681905-2 B456_013G180500 [Golgi membrane] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_013G184200 R-GRA-9035614-2 B456_013G184200 [cytosol] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_013G184200 R-GRA-9035651-2 B456_013G184200 [nucleoplasm] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_013G1844001 R-GRA-3321260 B456_013G1844001 [chloroplast stroma] R-GRA-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119287 Vitamin E biosynthesis none Gossypium raimondii B456_013G186300 R-GRA-9035785-2 B456_013G186300 [nucleoplasm] R-GRA-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9035605 Regulation of seed size none Gossypium raimondii B456_013G186300 R-GRA-9035785-2 B456_013G186300 [nucleoplasm] R-GRA-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9608575 Reproductive meristem phase change none Gossypium raimondii B456_013G187300 R-GRA-1128298 B456_013G187300 [cytosol] R-GRA-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119271 Threonine degradation none Gossypium raimondii B456_013G187300 R-GRA-1128298 B456_013G187300 [cytosol] R-GRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119610 Biotin biosynthesis II none Gossypium raimondii B456_013G187900 R-GRA-5632268-6 B456_013G187900 [nucleoplasm] R-GRA-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5632095 Brassinosteroid signaling none Gossypium raimondii B456_013G190100 R-GRA-1124291-3 B456_013G190100 [cytosol] R-GRA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Gossypium raimondii B456_013G190100 R-GRA-1124291-3 B456_013G190100 [cytosol] R-GRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119438 Secologanin and strictosidine biosynthesis none Gossypium raimondii B456_013G190100 R-GRA-1124291-3 B456_013G190100 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_013G190700 R-GRA-1124291-2 B456_013G190700 [cytosol] R-GRA-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Gossypium raimondii B456_013G190700 R-GRA-1124291-2 B456_013G190700 [cytosol] R-GRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119438 Secologanin and strictosidine biosynthesis none Gossypium raimondii B456_013G190700 R-GRA-1124291-2 B456_013G190700 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_013G192900 R-GRA-1124206 B456_013G192900 [cytosol] R-GRA-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119403 Removal of superoxide radicals none Gossypium raimondii B456_013G192900 R-GRA-1124206 B456_013G192900 [cytosol] R-GRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Gossypium raimondii B456_013G195000 R-GRA-1125151-6 B456_013G195000 [cytosol] R-GRA-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119400 Methionine biosynthesis II none Gossypium raimondii B456_013G195000 R-GRA-1125151-6 B456_013G195000 [cytosol] R-GRA-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119501 S-adenosyl-L-methionine cycle none Gossypium raimondii B456_013G195900 R-GRA-9675838 B456_013G195900 [nucleoplasm] R-GRA-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675815 Leading strand synthesis none Gossypium raimondii B456_013G196400 R-GRA-9924413-2 WOX6 [nucleoplasm] R-GRA-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9924451 Shoot (tiller) formation and regulation of tiller angle none Gossypium raimondii B456_013G200700 R-GRA-1122892-6 B456_013G200700 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_013G200700 R-GRA-1122892-6 B456_013G200700 [nucleoplasm] R-GRA-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030557 Lateral root initiation none Gossypium raimondii B456_013G200700 R-GRA-1122892-6 B456_013G200700 [nucleoplasm] R-GRA-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9030654 Primary root development none Gossypium raimondii B456_013G201600 R-GRA-1125038 B456_013G201600 [plastid stroma] R-GRA-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119449 Carotenoid biosynthesis none Gossypium raimondii B456_013G203500 R-GRA-5679398-3 B456_013G203500 [cytosol] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_013G203900 R-GRA-8933842 B456_013G203900 [cytosol] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_013G203900 R-GRA-8933843 B456_013G203900 [nucleoplasm] R-GRA-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-8933811 Circadian rhythm none Gossypium raimondii B456_013G204300 R-GRA-9826680-7 B456_013G204300 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_013G207700 R-GRA-9025712-5 B456_013G207700 [cytosol] R-GRA-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9025754 Mugineic acid biosynthesis none Gossypium raimondii B456_013G212100 R-GRA-9645872-2 B456_013G212100 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_013G215300 R-GRA-9681915-3 B456_013G215300 [Golgi membrane] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_013G216300 R-GRA-1123148 B456_013G216300 [cytosol] R-GRA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119300 Glycolipid desaturation none Gossypium raimondii B456_013G218100 R-GRA-9640704 B456_013G218100 [nucleoplasm] R-GRA-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9645850 Activation of pre-replication complex none Gossypium raimondii B456_013G218100 R-GRA-9640704 B456_013G218100 [nucleoplasm] R-GRA-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9675824 DNA replication Initiation none Gossypium raimondii B456_013G222400 R-GRA-1129561-2 B456_013G222400 [cytosol] R-GRA-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119452 Galactose degradation II none Gossypium raimondii B456_013G222400 R-GRA-1129561-2 B456_013G222400 [cytosol] R-GRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119465 Sucrose biosynthesis none Gossypium raimondii B456_013G223100 R-GRA-5084918 B456_013G223100 [cytosol] R-GRA-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119624 Methionine salvage pathway none Gossypium raimondii B456_013G223300 R-GRA-1123534 B456_013G223300 [cytosol] R-GRA-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119438 Secologanin and strictosidine biosynthesis none Gossypium raimondii B456_013G228200 R-GRA-1128798 B456_013G228200 [cytosol] R-GRA-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119331 Cysteine biosynthesis I none Gossypium raimondii B456_013G230000 R-GRA-1122541 B456_013G230000 [cytosol] R-GRA-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Gossypium raimondii B456_013G230000 R-GRA-1122541 B456_013G230000 [cytosol] R-GRA-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Gossypium raimondii B456_013G233300 R-GRA-1126395-4 B456_013G233300 [cytosol] R-GRA-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119486 IAA biosynthesis I none Gossypium raimondii B456_013G235900 R-GRA-1127574 B456_013G235900 [cytosol] R-GRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119465 Sucrose biosynthesis none Gossypium raimondii B456_013G241200 R-GRA-1123404-2 B456_013G241200 [peroxisomal matrix] R-GRA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119407 Ureide biosynthesis none Gossypium raimondii B456_013G246300 R-GRA-1124048 B456_013G246300 [cytosol] R-GRA-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119610 Biotin biosynthesis II none Gossypium raimondii B456_013G247000 R-GRA-1125325 B456_013G247000 [cytosol] R-GRA-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119465 Sucrose biosynthesis none Gossypium raimondii B456_013G248700 R-GRA-1124598-2 B456_013G248700 [cytosol] R-GRA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119300 Glycolipid desaturation none Gossypium raimondii B456_013G248800 R-GRA-1124598 B456_013G248800 [cytosol] R-GRA-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119300 Glycolipid desaturation none Gossypium raimondii B456_013G251500 R-GRA-1123404 B456_013G251500 [peroxisomal matrix] R-GRA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119407 Ureide biosynthesis none Gossypium raimondii B456_013G251900 R-GRA-1127928 B456_013G251900 [cytosol] R-GRA-1119595 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119595 Mannose degradation none Gossypium raimondii B456_013G251900 R-GRA-1127928 B456_013G251900 [cytosol] R-GRA-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119601 Trehalose degradation II none Gossypium raimondii B456_013G251900 R-GRA-1127928 B456_013G251900 [cytosol] R-GRA-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119628 GDP-mannose metabolism none Gossypium raimondii B456_013G252200 R-GRA-8987571 B456_013G252200 [peroxisomal matrix] R-GRA-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119312 Photorespiration none Gossypium raimondii B456_013G253500 R-GRA-9611465 B456_013G253500 [nucleoplasm] R-GRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Gossypium raimondii B456_013G253500 R-GRA-9611445 B456_013G253500 [nucleoplasm] R-GRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Gossypium raimondii B456_013G257100 R-GRA-9640739 B456_013G257100 [nucleoplasm] R-GRA-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9640887 G1/S transition none Gossypium raimondii B456_013G258300 R-GRA-9930216-2 ABI5 [nucleoplasm] R-GRA-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9766881 TF network involved in salinity response none Gossypium raimondii B456_013G258800 R-GRA-1124560-4 B456_013G258800 [cytosol] R-GRA-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119563 UDP-D-xylose biosynthesis none Gossypium raimondii B456_013G258800 R-GRA-9681903-4 B456_013G258800 [Golgi lumen] R-GRA-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119574 UDP-L-arabinose biosynthesis and transport none Gossypium raimondii B456_013G258800 R-GRA-1124560-4 B456_013G258800 [cytosol] R-GRA-5654894 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5654894 UDP-D-apiose biosynthesis none Gossypium raimondii B456_013G261900 R-GRA-1127539-2 B456_013G261900 [cytosol] R-GRA-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Gossypium raimondii B456_013G261900 R-GRA-1127539-2 B456_013G261900 [cytosol] R-GRA-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119439 Cholesterol biosynthesis III (via desmosterol) none Gossypium raimondii B456_013G261900 R-GRA-1127539-2 B456_013G261900 [cytosol] R-GRA-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119559 Cholesterol biosynthesis I none Gossypium raimondii B456_013G263400 R-GRA-9684723 B456_013G263400 [cytosol] R-GRA-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9609102 Flower development none Gossypium raimondii B456_013G263600 R-GRA-9611477-3 phospho-phosphorylated-RLCK176 [cytosol] R-GRA-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9611432 Recognition of fungal and bacterial pathogens and immunity response none Gossypium raimondii B456_013G265300 R-GRA-9826691-2 B456_013G265300 [nucleoplasm] R-GRA-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Gossypium raimondii B456_013G267100 R-GRA-5608161-2 B456_013G267100 [nucleoplasm] R-GRA-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5608118 Auxin signalling none Gossypium raimondii B456_013G271700 R-GRA-1127076-2 B456_013G271700 [cytosol] R-GRA-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119418 Suberin biosynthesis none Gossypium raimondii B456_013G271700 R-GRA-1127076-2 B456_013G271700 [cytosol] R-GRA-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119582 Phenylpropanoid biosynthesis, initial reactions none Gossypium raimondii B456_N000500 R-GRA-1127443-2 B456_N000500 [amyloplast] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_N000500 R-GRA-1122818-4 B456_N000500 [cytosol] R-GRA-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119477 Starch biosynthesis none Gossypium raimondii B456_N008000 R-GRA-9025230 B456_N008000 [peroxisomal matrix] R-GRA-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119407 Ureide biosynthesis none Gossypium raimondii B456_N020400 R-GRA-5679398 B456_N020400 [cytosol] R-GRA-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-5679411 Gibberellin signaling none Gossypium raimondii B456_N020800 R-GRA-1130327-5 B456_N020800 [cytosol] R-GRA-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119586 Cyanate degradation none Gossypium raimondii B456_N024600 R-GRA-9639810-3 B456_N024600 [cell wall] R-GRA-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-9639861 Development of root hair none Gossypium raimondii B456_N027600 R-GRA-9025500-3 B456_N027600 [endoplasmic reticulum membrane] R-GRA-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119325 Sphingolipid metabolism none Gossypium raimondii B456_N027900 R-GRA-5138505-2 B456_N027900 [plastid stroma] R-GRA-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119263 Arginine biosynthesis none Gossypium raimondii B456_N027900 R-GRA-5138505-2 B456_N027900 [plastid stroma] R-GRA-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119539 Ornithine biosynthesis none Gossypium raimondii B456_N027900 R-GRA-5138505-2 B456_N027900 [plastid stroma] R-GRA-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-GRA-1119622 Arginine biosynthesis II (acetyl cycle) none Gossypium raimondii BGIOSGA000001 R-OSI-1122545 BGIOSGA000001 [cytosol] R-OSI-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119331 Cysteine biosynthesis I none Oryza sativa Indica Group BGIOSGA000026 R-OSI-9025351 BGIOSGA000026 [cytosol] R-OSI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119402 Phospholipid biosynthesis I none Oryza sativa Indica Group BGIOSGA000035 R-OSI-1124560 BGIOSGA000035 [cytosol] R-OSI-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119563 UDP-D-xylose biosynthesis none Oryza sativa Indica Group BGIOSGA000035 R-OSI-9681903 BGIOSGA000035 [Golgi lumen] R-OSI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119574 UDP-L-arabinose biosynthesis and transport none Oryza sativa Indica Group BGIOSGA000035 R-OSI-1124560 BGIOSGA000035 [cytosol] R-OSI-5654894 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5654894 UDP-D-apiose biosynthesis none Oryza sativa Indica Group BGIOSGA000047 R-OSI-3315084 BGIOSGA000047 [cytosol] R-OSI-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119342 Gamma-glutamyl cycle none Oryza sativa Indica Group BGIOSGA000075 R-OSI-1126488 BGIOSGA000075 [mitochondrial inner membrane] R-OSI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119402 Phospholipid biosynthesis I none Oryza sativa Indica Group BGIOSGA000114 R-OSI-5631958 BGIOSGA000114 [cytosol] R-OSI-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119289 Arginine degradation none Oryza sativa Indica Group BGIOSGA000114 R-OSI-1122345 BGIOSGA000114 [cytosol] R-OSI-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119318 Proline biosynthesis V (from arginine) none Oryza sativa Indica Group BGIOSGA000114 R-OSI-1122345 BGIOSGA000114 [cytosol] R-OSI-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119631 Proline biosynthesis I none Oryza sativa Indica Group BGIOSGA000142 R-OSI-1127928 BGIOSGA000142 [cytosol] R-OSI-1119595 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119595 Mannose degradation none Oryza sativa Indica Group BGIOSGA000142 R-OSI-1127928 BGIOSGA000142 [cytosol] R-OSI-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119601 Trehalose degradation II none Oryza sativa Indica Group BGIOSGA000142 R-OSI-1127928 BGIOSGA000142 [cytosol] R-OSI-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119628 GDP-mannose metabolism none Oryza sativa Indica Group BGIOSGA000165 R-OSI-1173282 BGIOSGA000165 [mitochondrial inner membrane] R-OSI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119533 TCA cycle (plant) none Oryza sativa Indica Group BGIOSGA000200 R-OSI-9025479 BGIOSGA000200 [endoplasmic reticulum membrane] R-OSI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119325 Sphingolipid metabolism none Oryza sativa Indica Group BGIOSGA000200 R-OSI-1124181 BGIOSGA000200 [cytosol] R-OSI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119610 Biotin biosynthesis II none Oryza sativa Indica Group BGIOSGA000201 R-OSI-9025465 BGIOSGA000201 [endoplasmic reticulum membrane] R-OSI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119325 Sphingolipid metabolism none Oryza sativa Indica Group BGIOSGA000201 R-OSI-1126933 BGIOSGA000201 [cytosol] R-OSI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119610 Biotin biosynthesis II none Oryza sativa Indica Group BGIOSGA000202 R-OSI-9025492 BGIOSGA000202 [endoplasmic reticulum membrane] R-OSI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119325 Sphingolipid metabolism none Oryza sativa Indica Group BGIOSGA000202 R-OSI-1124423 BGIOSGA000202 [cytosol] R-OSI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119610 Biotin biosynthesis II none Oryza sativa Indica Group BGIOSGA000206 R-OSI-8879006 BGIOSGA000206 [nucleoplasm] R-OSI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8879007 Response to cold temperature none Oryza sativa Indica Group BGIOSGA000207 R-OSI-1125452 BGIOSGA000207 [cytosol] R-OSI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119273 Lysine biosynthesis I none Oryza sativa Indica Group BGIOSGA000207 R-OSI-1125452 BGIOSGA000207 [cytosol] R-OSI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119283 Lysine biosynthesis II none Oryza sativa Indica Group BGIOSGA000207 R-OSI-1125452 BGIOSGA000207 [cytosol] R-OSI-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119295 Homoserine biosynthesis none Oryza sativa Indica Group BGIOSGA000207 R-OSI-5606511 BGIOSGA000207 [plastid stroma] R-OSI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119419 Lysine biosynthesis VI none Oryza sativa Indica Group BGIOSGA000239 R-OSI-1124348 BGIOSGA000239 [cytosol] R-OSI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119465 Sucrose biosynthesis none Oryza sativa Indica Group BGIOSGA000301 R-OSI-5149646 BGIOSGA000301 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA000301 R-OSI-1126652 BGIOSGA000301 [cytosol] R-OSI-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119570 Cytosolic glycolysis none Oryza sativa Indica Group BGIOSGA000322 R-OSI-9675297 BGIOSGA000322 [mitochondrion] R-OSI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030654 Primary root development none Oryza sativa Indica Group BGIOSGA000326 R-OSI-9639789 BGIOSGA000326 [plasma membrane] R-OSI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9639861 Development of root hair none Oryza sativa Indica Group BGIOSGA000374 R-OSI-9930308 SNAC2 (OsNAC6) [nucleoplasm] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA000426 R-OSI-9645950 BGIOSGA000426 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA000426 R-OSI-9645950 BGIOSGA000426 [nucleoplasm] R-OSI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675782 Maturation none Oryza sativa Indica Group BGIOSGA000426 R-OSI-9645950 BGIOSGA000426 [nucleoplasm] R-OSI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675815 Leading strand synthesis none Oryza sativa Indica Group BGIOSGA000426 R-OSI-9645950 BGIOSGA000426 [nucleoplasm] R-OSI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675824 DNA replication Initiation none Oryza sativa Indica Group BGIOSGA000426 R-OSI-9645950 BGIOSGA000426 [nucleoplasm] R-OSI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675885 Lagging strand synthesis none Oryza sativa Indica Group BGIOSGA000430 R-OSI-9928771 BGIOSGA000430 [nucleoplasm] R-OSI-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9928831 Severe drought none Oryza sativa Indica Group BGIOSGA000438 R-OSI-1124453 BGIOSGA000438 [peroxisomal matrix] R-OSI-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119407 Ureide biosynthesis none Oryza sativa Indica Group BGIOSGA000451 R-OSI-6787863 BGIOSGA000451 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA000488 R-OSI-9611490 BGIOSGA000488 [plasma membrane] R-OSI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Oryza sativa Indica Group BGIOSGA000523 R-OSI-8879076 BGIOSGA000523 [nucleoplasm] R-OSI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8879007 Response to cold temperature none Oryza sativa Indica Group BGIOSGA000598 R-OSI-6788072 BGIOSGA000598 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA000624 R-OSI-6788041 BGIOSGA000624 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA000638 R-OSI-9681915 BGIOSGA000638 [Golgi membrane] R-OSI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119574 UDP-L-arabinose biosynthesis and transport none Oryza sativa Indica Group BGIOSGA000639 R-OSI-1130025 BGIOSGA000639 [endosome] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA000639 R-OSI-5679302 BGIOSGA000639 [plasma membrane] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA000642 R-OSI-9025331 BGIOSGA000642 [cytosol] R-OSI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119402 Phospholipid biosynthesis I none Oryza sativa Indica Group BGIOSGA000655 R-OSI-8853988 Phosphatidylglycerophosphatase [mitochondrial matrix] R-OSI-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119260 Cardiolipin biosynthesis none Oryza sativa Indica Group BGIOSGA000668 R-OSI-1127999 BGIOSGA000668 [mitochondrial inner membrane] R-OSI-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119260 Cardiolipin biosynthesis none Oryza sativa Indica Group BGIOSGA000698 R-OSI-1130140 BGIOSGA000698 [chloroplast envelope] R-OSI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119402 Phospholipid biosynthesis I none Oryza sativa Indica Group BGIOSGA000699 R-OSI-9025487 BGIOSGA000699 [cytosol] R-OSI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119325 Sphingolipid metabolism none Oryza sativa Indica Group BGIOSGA000765 R-OSI-1126095 BGIOSGA000765 [cytosol] R-OSI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119389 Phenylalanine biosynthesis I none Oryza sativa Indica Group BGIOSGA000783 R-OSI-1125734 BGIOSGA000783 [cytosol] R-OSI-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119281 Aspartate biosynthesis I none Oryza sativa Indica Group BGIOSGA000783 R-OSI-5632000 BGIOSGA000783 [plastid stroma] R-OSI-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119553 Asparagine biosynthesis none Oryza sativa Indica Group BGIOSGA000791 R-OSI-1123745 BGIOSGA000791 [endoplasmic reticulum membrane] R-OSI-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119260 Cardiolipin biosynthesis none Oryza sativa Indica Group BGIOSGA000791 R-OSI-1123745 BGIOSGA000791 [endoplasmic reticulum membrane] R-OSI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119402 Phospholipid biosynthesis I none Oryza sativa Indica Group BGIOSGA000812 R-OSI-5608212 BGIOSGA000812 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA000812 R-OSI-5608212 BGIOSGA000812 [nucleoplasm] R-OSI-9675304 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675304 Lateral root emergence none Oryza sativa Indica Group BGIOSGA000817 R-OSI-1124083 BGIOSGA000817 [cytosol] R-OSI-1119323 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119323 Lipid-A-precursor biosynthesis none Oryza sativa Indica Group BGIOSGA000826 R-OSI-6788120 BGIOSGA000826 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA000826 R-OSI-6788120 BGIOSGA000826 [nucleoplasm] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA000839 R-OSI-5367761 BGIOSGA000839 [plastid stroma] R-OSI-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5367729 Strigolactone biosynthesis none Oryza sativa Indica Group BGIOSGA000861 R-OSI-1127292 BGIOSGA000861 [plastid stroma] R-OSI-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Oryza sativa Indica Group BGIOSGA000900 R-OSI-1122788 BGIOSGA000900 [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA000911 R-OSI-8854110 BGIOSGA000911 [cytosol] R-OSI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119556 Choline biosynthesis I none Oryza sativa Indica Group BGIOSGA000916 R-OSI-8858063 BGIOSGA000916 [plasma membrane] R-OSI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8858053 Polar auxin transport none Oryza sativa Indica Group BGIOSGA000921 R-OSI-6787204 BGIOSGA000921 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA000980 R-OSI-1130059 BGIOSGA000980 [cytosol] R-OSI-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119262 Threonine biosynthesis from homoserine none Oryza sativa Indica Group BGIOSGA001011 R-OSI-1128101 BGIOSGA001011 [endoplasmic reticulum membrane] R-OSI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119402 Phospholipid biosynthesis I none Oryza sativa Indica Group BGIOSGA001013 R-OSI-1129859 BGIOSGA001013 [chloroplast stroma] R-OSI-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119443 Ammonia assimilation cycle none Oryza sativa Indica Group BGIOSGA001013 R-OSI-5606382 BGIOSGA001013 [plastid stroma] R-OSI-1119535 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119535 Glutamate biosynthesis IV none Oryza sativa Indica Group BGIOSGA001024 R-OSI-9640723 BGIOSGA001024 [nucleoplasm] R-OSI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640887 G1/S transition none Oryza sativa Indica Group BGIOSGA001046 R-OSI-5608132 BGIOSGA001046 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA001060 R-OSI-9612372 BGIOSGA001060 [mitochondrial matrix] R-OSI-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119612 Cysteine degradation none Oryza sativa Indica Group BGIOSGA001077 R-OSI-4752547 BGIOSGA001077 [plastid stroma] R-OSI-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119498 Phylloquinone biosynthesis none Oryza sativa Indica Group BGIOSGA001088 R-OSI-5654816 BGIOSGA001088 [nucleoplasm] R-OSI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5654828 Strigolactone signaling none Oryza sativa Indica Group BGIOSGA001151 R-OSI-1125570 BGIOSGA001151 [cytosol] R-OSI-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119450 Homocysteine biosynthesis none Oryza sativa Indica Group BGIOSGA001314 R-OSI-9608693 BGIOSGA001314 [cytosol] R-OSI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9608575 Reproductive meristem phase change none Oryza sativa Indica Group BGIOSGA001391 R-OSI-5367725 BGIOSGA001391 [plastid stroma] R-OSI-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5367729 Strigolactone biosynthesis none Oryza sativa Indica Group BGIOSGA001413 R-OSI-2685730 BGIOSGA001413 [cytosol] R-OSI-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119580 IAA biosynthesis II none Oryza sativa Indica Group BGIOSGA001611 R-OSI-1127089 BGIOSGA001611 [cytosol] R-OSI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119465 Sucrose biosynthesis none Oryza sativa Indica Group BGIOSGA001621 R-OSI-1130078 BGIOSGA001621 [cytosol] R-OSI-1119440 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119440 Anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside) none Oryza sativa Indica Group BGIOSGA001621 R-OSI-2672102 BGIOSGA001621 [cytosol] R-OSI-1119514 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119514 Anthocyanin biosynthesis (delphinidin 3-O-glucoside) none Oryza sativa Indica Group BGIOSGA001663 R-OSI-9607132 RBOHB [plasma membrane] R-OSI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Oryza sativa Indica Group BGIOSGA001663 R-OSI-9611529 phospho-phosphorylated-RBOHB [plasma membrane] R-OSI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Oryza sativa Indica Group BGIOSGA001689 R-OSI-1127922 BGIOSGA001689 [cytosol] R-OSI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119370 Sterol biosynthesis none Oryza sativa Indica Group BGIOSGA001725 R-OSI-1122369 BGIOSGA001725 [cytosol] R-OSI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119473 Cytokinins-O-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA001752 R-OSI-8986605 BGIOSGA001752 [mitochondrial matrix] R-OSI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119312 Photorespiration none Oryza sativa Indica Group BGIOSGA001752 R-OSI-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-OSI-1119351 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119351 Mitochondrial pyruvate metabolism none Oryza sativa Indica Group BGIOSGA001752 R-OSI-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-OSI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119533 TCA cycle (plant) none Oryza sativa Indica Group BGIOSGA001769 R-OSI-1124164 BGIOSGA001769 [cytosol] R-OSI-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119334 Ethylene biosynthesis from methionine none Oryza sativa Indica Group BGIOSGA001769 R-OSI-1124164 BGIOSGA001769 [cytosol] R-OSI-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119501 S-adenosyl-L-methionine cycle none Oryza sativa Indica Group BGIOSGA001769 R-OSI-1124164 BGIOSGA001769 [cytosol] R-OSI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119624 Methionine salvage pathway none Oryza sativa Indica Group BGIOSGA001769 R-OSI-9025764 BGIOSGA001769 [cytosol] R-OSI-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9025754 Mugineic acid biosynthesis none Oryza sativa Indica Group BGIOSGA001859 R-OSI-9612380 BGIOSGA001859 [cytosol] R-OSI-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119612 Cysteine degradation none Oryza sativa Indica Group BGIOSGA001870 R-OSI-8933777 BGIOSGA001870 [nucleoplasm] R-OSI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8933811 Circadian rhythm none Oryza sativa Indica Group BGIOSGA001870 R-OSI-9924457 PIL15 [nucleoplasm] R-OSI-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924494 Gravity sensing and statolith sedimentation none Oryza sativa Indica Group BGIOSGA001872 R-OSI-9826674 BGIOSGA001872 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA001899 R-OSI-1123596 BGIOSGA001899 [plastid stroma] R-OSI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119509 Histidine biosynthesis I none Oryza sativa Indica Group BGIOSGA001977 R-OSI-5632301 BGIOSGA001977 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA001977 R-OSI-5632301 BGIOSGA001977 [nucleoplasm] R-OSI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5654828 Strigolactone signaling none Oryza sativa Indica Group BGIOSGA001977 R-OSI-5632301 BGIOSGA001977 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA001996 R-OSI-9675820 BGIOSGA001996 [nucleoplasm] R-OSI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675824 DNA replication Initiation none Oryza sativa Indica Group BGIOSGA002078 R-OSI-9611557 RAC1 [plasma membrane] R-OSI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Oryza sativa Indica Group BGIOSGA002091 R-OSI-1125369 BGIOSGA002091 [cytosol] R-OSI-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119496 Pantothenate biosynthesis I none Oryza sativa Indica Group BGIOSGA002091 R-OSI-1125369 BGIOSGA002091 [cytosol] R-OSI-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119544 Pantothenate biosynthesis II none Oryza sativa Indica Group BGIOSGA002109 R-OSI-6787202 BGIOSGA002109 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA002161 R-OSI-5632139 BGIOSGA002161 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA002167 R-OSI-9675827 BGIOSGA002167 [nucleoplasm] R-OSI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675782 Maturation none Oryza sativa Indica Group BGIOSGA002167 R-OSI-9675827 BGIOSGA002167 [nucleoplasm] R-OSI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675815 Leading strand synthesis none Oryza sativa Indica Group BGIOSGA002167 R-OSI-9675827 BGIOSGA002167 [nucleoplasm] R-OSI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675885 Lagging strand synthesis none Oryza sativa Indica Group BGIOSGA002172 R-OSI-5632315 BGIOSGA002172 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA002172 R-OSI-5632284 phospho-BGIOSGA002172 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA002172 R-OSI-5632277 phospho-BGIOSGA002172 [cytosol] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA002172 R-OSI-5632315 BGIOSGA002172 [nucleoplasm] R-OSI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5679411 Gibberellin signaling none Oryza sativa Indica Group BGIOSGA002179 R-OSI-8986675 BGIOSGA002179 [nucleoplasm] R-OSI-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9609102 Flower development none Oryza sativa Indica Group BGIOSGA002207 R-OSI-6788127 BGIOSGA002207 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA002207 R-OSI-6788179 BGIOSGA002207 [cytosol] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA002212 R-OSI-1127015 BGIOSGA002212 [cytosol] R-OSI-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119334 Ethylene biosynthesis from methionine none Oryza sativa Indica Group BGIOSGA002212 R-OSI-1127015 BGIOSGA002212 [cytosol] R-OSI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119624 Methionine salvage pathway none Oryza sativa Indica Group BGIOSGA002217 R-OSI-9916314 OsDOS [nucleoplasm] R-OSI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9916190 Root angle formation: elongation and curvature response none Oryza sativa Indica Group BGIOSGA002246 R-OSI-8933813 BGIOSGA002246 [nucleoplasm] R-OSI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8933811 Circadian rhythm none Oryza sativa Indica Group BGIOSGA002246 R-OSI-8933813 BGIOSGA002246 [nucleoplasm] R-OSI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934036 Long day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA002246 R-OSI-8933813 BGIOSGA002246 [nucleoplasm] R-OSI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924451 Shoot (tiller) formation and regulation of tiller angle none Oryza sativa Indica Group BGIOSGA002246 R-OSI-8933813 BGIOSGA002246 [nucleoplasm] R-OSI-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9928946 Drought escape (DE) via ABA-independent pathway none Oryza sativa Indica Group BGIOSGA002264 R-OSI-9639205 BGIOSGA002264 [plasma membrane] R-OSI-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9639136 Response to Aluminum stress none Oryza sativa Indica Group BGIOSGA002291 R-OSI-1122471 BGIOSGA002291 [cytosol] R-OSI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119276 Choline biosynthesis III none Oryza sativa Indica Group BGIOSGA002302 R-OSI-1127752 BGIOSGA002302 [cytosol] R-OSI-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119417 Stachyose biosynthesis none Oryza sativa Indica Group BGIOSGA002304 R-OSI-1125521 BGIOSGA002304 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA002327 R-OSI-6788042 BGIOSGA002327 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA002345 R-OSI-1124944 BGIOSGA002345 [plastid stroma] R-OSI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119460 Isoleucine biosynthesis from threonine none Oryza sativa Indica Group BGIOSGA002345 R-OSI-1124944 BGIOSGA002345 [plastid stroma] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA002345 R-OSI-1124944 BGIOSGA002345 [plastid stroma] R-OSI-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119502 Allantoin degradation none Oryza sativa Indica Group BGIOSGA002345 R-OSI-1124944 BGIOSGA002345 [plastid stroma] R-OSI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119600 Valine biosynthesis none Oryza sativa Indica Group BGIOSGA002347 R-OSI-1124145 BGIOSGA002347 [mitochondrial matrix] R-OSI-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119445 Beta-alanine biosynthesis II none Oryza sativa Indica Group BGIOSGA002348 R-OSI-9826661 BGIOSGA002348 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA002387 R-OSI-1125877 BGIOSGA002387 [cytosol] R-OSI-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119456 Brassinosteroid biosynthesis II none Oryza sativa Indica Group BGIOSGA002548 R-OSI-1126916 BGIOSGA002548 [plastid stroma] R-OSI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119464 Methylerythritol phosphate pathway none Oryza sativa Indica Group BGIOSGA002551 R-OSI-1123517 BGIOSGA002551 [cytosol] R-OSI-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119395 Maackiain biosynthesis none Oryza sativa Indica Group BGIOSGA002551 R-OSI-1123517 BGIOSGA002551 [cytosol] R-OSI-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119453 Medicarpin biosynthesis none Oryza sativa Indica Group BGIOSGA002552 R-OSI-1123717 BGIOSGA002552 [cytosol] R-OSI-1119395 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119395 Maackiain biosynthesis none Oryza sativa Indica Group BGIOSGA002552 R-OSI-1123717 BGIOSGA002552 [cytosol] R-OSI-1119453 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119453 Medicarpin biosynthesis none Oryza sativa Indica Group BGIOSGA002561 R-OSI-1123211 BGIOSGA002561 [cytosol] R-OSI-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Oryza sativa Indica Group BGIOSGA002561 R-OSI-1123211 BGIOSGA002561 [cytosol] R-OSI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119370 Sterol biosynthesis none Oryza sativa Indica Group BGIOSGA002561 R-OSI-1123211 BGIOSGA002561 [cytosol] R-OSI-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119439 Cholesterol biosynthesis III (via desmosterol) none Oryza sativa Indica Group BGIOSGA002561 R-OSI-1123211 BGIOSGA002561 [cytosol] R-OSI-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119559 Cholesterol biosynthesis I none Oryza sativa Indica Group BGIOSGA002576 R-OSI-1130231 BGIOSGA002576 [endoplasmic reticulum membrane] R-OSI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119325 Sphingolipid metabolism none Oryza sativa Indica Group BGIOSGA002587 R-OSI-1125182 BGIOSGA002587 [plastid stroma] R-OSI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119430 Chorismate biosynthesis none Oryza sativa Indica Group BGIOSGA002613 R-OSI-1125340 BGIOSGA002613 [plastid stroma] R-OSI-1119274 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119274 Monoterpene biosynthesis none Oryza sativa Indica Group BGIOSGA002613 R-OSI-1125340 BGIOSGA002613 [plastid stroma] R-OSI-1119593 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119593 Oleoresin monoterpene volatiles biosynthesis none Oryza sativa Indica Group BGIOSGA002627 R-OSI-1124270 BGIOSGA002627 [cytosol] R-OSI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119615 Mevalonate pathway none Oryza sativa Indica Group BGIOSGA002655 R-OSI-9025363 BGIOSGA002655 [endoplasmic reticulum membrane] R-OSI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119402 Phospholipid biosynthesis I none Oryza sativa Indica Group BGIOSGA002681 R-OSI-9916160 BGIOSGA002681 [nucleoplasm] R-OSI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9916190 Root angle formation: elongation and curvature response none Oryza sativa Indica Group BGIOSGA002689 R-OSI-9684771 BGIOSGA002689 [cytosol] R-OSI-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9609102 Flower development none Oryza sativa Indica Group BGIOSGA002696 R-OSI-1126531 BGIOSGA002696 [cytosol] R-OSI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119410 Ascorbate biosynthesis none Oryza sativa Indica Group BGIOSGA002696 R-OSI-1126531 BGIOSGA002696 [cytosol] R-OSI-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119628 GDP-mannose metabolism none Oryza sativa Indica Group BGIOSGA002748 R-OSI-9826681 EREBP129 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA002753 R-OSI-9826681-2 EREBP129 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA002846 R-OSI-9930201 DREB2A [nucleoplasm] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA002875 R-OSI-1128678 BGIOSGA002875 [cytosol] R-OSI-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119292 Cytokinins 7-N-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA002875 R-OSI-1128678 BGIOSGA002875 [cytosol] R-OSI-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119375 Cytokinins 9-N-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA002875 R-OSI-1128678 BGIOSGA002875 [cytosol] R-OSI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119473 Cytokinins-O-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA002876 R-OSI-1125583 BGIOSGA002876 [cytosol] R-OSI-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119292 Cytokinins 7-N-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA002876 R-OSI-1125583 BGIOSGA002876 [cytosol] R-OSI-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119375 Cytokinins 9-N-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA002876 R-OSI-1125583 BGIOSGA002876 [cytosol] R-OSI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119473 Cytokinins-O-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA002877 R-OSI-1129223 BGIOSGA002877 [cytosol] R-OSI-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119292 Cytokinins 7-N-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA002877 R-OSI-1129223 BGIOSGA002877 [cytosol] R-OSI-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119375 Cytokinins 9-N-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA002877 R-OSI-1129223 BGIOSGA002877 [cytosol] R-OSI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119473 Cytokinins-O-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA002898 R-OSI-8854120 BGIOSGA002898 [cytosol] R-OSI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119556 Choline biosynthesis I none Oryza sativa Indica Group BGIOSGA002924 R-OSI-1122541 BGIOSGA002924 [cytosol] R-OSI-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Oryza sativa Indica Group BGIOSGA002924 R-OSI-1122541 BGIOSGA002924 [cytosol] R-OSI-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Oryza sativa Indica Group BGIOSGA002927 R-OSI-1125058 BGIOSGA002927 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA002939 R-OSI-5679376 BGIOSGA002939 [nucleoplasm] R-OSI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5679411 Gibberellin signaling none Oryza sativa Indica Group BGIOSGA002950 R-OSI-1125698 BGIOSGA002950 [cytosol] R-OSI-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119436 Peptidoglycan biosynthesis I none Oryza sativa Indica Group BGIOSGA002981 R-OSI-5632133 BGIOSGA002981 [cytosol] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA003050 R-OSI-1126395 BGIOSGA003050 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA003067 R-OSI-1126435 BGIOSGA003067 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA003078 R-OSI-1128989 BGIOSGA003078 [plastid stroma] R-OSI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119509 Histidine biosynthesis I none Oryza sativa Indica Group BGIOSGA003093 R-OSI-9675365 BGIOSGA003093 [nucleoplasm] R-OSI-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675508 Root elongation none Oryza sativa Indica Group BGIOSGA003122 R-OSI-5679436 BGIOSGA003122 [nucleoplasm] R-OSI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5679411 Gibberellin signaling none Oryza sativa Indica Group BGIOSGA003134 R-OSI-6787229 BGIOSGA003134 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA003134 R-OSI-9826659 BGIOSGA003134 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA003249 R-OSI-1129851 BGIOSGA003249 [mitochondrial matrix] R-OSI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119533 TCA cycle (plant) none Oryza sativa Indica Group BGIOSGA003249 R-OSI-1129851 BGIOSGA003249 [mitochondrial matrix] R-OSI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119540 Leucine biosynthesis none Oryza sativa Indica Group BGIOSGA003292 R-OSI-1129914 BGIOSGA003292 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA003309 R-OSI-9612399 BGIOSGA003309 [peroxisomal matrix] R-OSI-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119612 Cysteine degradation none Oryza sativa Indica Group BGIOSGA003395 R-OSI-9916108 BGIOSGA003395 [extracellular region] R-OSI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119403 Removal of superoxide radicals none Oryza sativa Indica Group BGIOSGA003395 R-OSI-9916108 BGIOSGA003395 [extracellular region] R-OSI-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9607185 Generation of superoxide radicals none Oryza sativa Indica Group BGIOSGA003476 R-OSI-9030934 BGIOSGA003476 [nucleoplasm] R-OSI-9030908 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030908 Underwater shoot and internode elongation none Oryza sativa Indica Group BGIOSGA003552 R-OSI-1127695 BGIOSGA003552 [plastid stroma] R-OSI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119430 Chorismate biosynthesis none Oryza sativa Indica Group BGIOSGA003617 R-OSI-9930257 RH2 [nucleoplasm] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA003718 R-OSI-9640761 BGIOSGA003718 [nucleoplasm] R-OSI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640882 Assembly of pre-replication complex none Oryza sativa Indica Group BGIOSGA003718 R-OSI-9640761 BGIOSGA003718 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA003718 R-OSI-9640761 BGIOSGA003718 [nucleoplasm] R-OSI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675824 DNA replication Initiation none Oryza sativa Indica Group BGIOSGA003803 R-OSI-5679401 BGIOSGA003803 [nucleoplasm] R-OSI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5679411 Gibberellin signaling none Oryza sativa Indica Group BGIOSGA003829 R-OSI-1126373 BGIOSGA003829 [cytosol] R-OSI-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Oryza sativa Indica Group BGIOSGA004027 R-OSI-5632188 BGIOSGA004027 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA004052 R-OSI-1130466 BGIOSGA004052 [cytosol] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA004082 R-OSI-1130327 BGIOSGA004082 [cytosol] R-OSI-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119586 Cyanate degradation none Oryza sativa Indica Group BGIOSGA004085 R-OSI-1123694 BGIOSGA004085 [plastid stroma] R-OSI-1119274 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119274 Monoterpene biosynthesis none Oryza sativa Indica Group BGIOSGA004085 R-OSI-1123694 BGIOSGA004085 [plastid stroma] R-OSI-1119593 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119593 Oleoresin monoterpene volatiles biosynthesis none Oryza sativa Indica Group BGIOSGA004096 R-OSI-1128126 BGIOSGA004096 [endosome] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA004096 R-OSI-5679348 BGIOSGA004096 [plasma membrane] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA004101 R-OSI-1126875 BGIOSGA004101 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA004108 R-OSI-1128071 BGIOSGA004108 [mitochondrial matrix] R-OSI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119533 TCA cycle (plant) none Oryza sativa Indica Group BGIOSGA004125 R-OSI-1122727 BGIOSGA004125 [cytosol] R-OSI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119460 Isoleucine biosynthesis from threonine none Oryza sativa Indica Group BGIOSGA004125 R-OSI-1122727 BGIOSGA004125 [cytosol] R-OSI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119600 Valine biosynthesis none Oryza sativa Indica Group BGIOSGA004162 R-OSI-9930197 MPK8 [nucleoplasm] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA004190 R-OSI-1124692 BGIOSGA004190 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA004212 R-OSI-8987467 BGIOSGA004212 [chloroplast] R-OSI-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119502 Allantoin degradation none Oryza sativa Indica Group BGIOSGA004215 R-OSI-9640785 BGIOSGA004215 [nucleoplasm] R-OSI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640882 Assembly of pre-replication complex none Oryza sativa Indica Group BGIOSGA004215 R-OSI-9640785 BGIOSGA004215 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA004246 R-OSI-5632121 BGIOSGA004246 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA004256 R-OSI-1124970 BGIOSGA004256 [cytosol] R-OSI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119556 Choline biosynthesis I none Oryza sativa Indica Group BGIOSGA004276 R-OSI-5367759 BGIOSGA004276 [cytosol] R-OSI-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5367729 Strigolactone biosynthesis none Oryza sativa Indica Group BGIOSGA004282 R-OSI-1130006 BGIOSGA004282 [plastid stroma] R-OSI-1119569 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119569 Kievitone biosynthesis none Oryza sativa Indica Group BGIOSGA004292 R-OSI-6787238 BGIOSGA004292 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA004334 R-OSI-1129466 BGIOSGA004334 [cytosol] R-OSI-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119449 Carotenoid biosynthesis none Oryza sativa Indica Group BGIOSGA004352 R-OSI-1128798 BGIOSGA004352 [cytosol] R-OSI-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119331 Cysteine biosynthesis I none Oryza sativa Indica Group BGIOSGA004374 R-OSI-1127753 BGIOSGA004374 [cytosol] R-OSI-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119278 PRPP biosynthesis I none Oryza sativa Indica Group BGIOSGA004401 R-OSI-1124809 BGIOSGA004401 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA004407 R-OSI-9607105 BGIOSGA004407 [mitochondrion] R-OSI-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9607185 Generation of superoxide radicals none Oryza sativa Indica Group BGIOSGA004435 R-OSI-1126981 BGIOSGA004435 [nucleoplasm] R-OSI-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030680 Crown root development none Oryza sativa Indica Group BGIOSGA004463 R-OSI-1124491 BGIOSGA004463 [plasma membrane] R-OSI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119314 Cellulose biosynthesis none Oryza sativa Indica Group BGIOSGA004522 R-OSI-6788026 BGIOSGA004522 [cytosol] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA004619 R-OSI-5149643 BGIOSGA004619 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA004631 R-OSI-4723690 BGIOSGA004631 [plastid stroma] R-OSI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119464 Methylerythritol phosphate pathway none Oryza sativa Indica Group BGIOSGA004650 R-OSI-1127373 BGIOSGA004650 [cytosol] R-OSI-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119297 Beta-alanine biosynthesis III none Oryza sativa Indica Group BGIOSGA004670 R-OSI-9608678 BGIOSGA004670 [cytosol] R-OSI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9608575 Reproductive meristem phase change none Oryza sativa Indica Group BGIOSGA004670 R-OSI-8986843 BGIOSGA004670 [nucleoplasm] R-OSI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9608575 Reproductive meristem phase change none Oryza sativa Indica Group BGIOSGA004692 R-OSI-8868904 BGIOSGA004692 [endoplasmic reticulum membrane] R-OSI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8868949 Intracellular auxin transport none Oryza sativa Indica Group BGIOSGA004705 R-OSI-9766833 BGIOSGA004705 [nucleoplasm] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA004719 R-OSI-9675399 BGIOSGA004719 [nucleoplasm] R-OSI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030654 Primary root development none Oryza sativa Indica Group BGIOSGA004722 R-OSI-6786908 BGIOSGA004722 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA004722 R-OSI-6786908 BGIOSGA004722 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA004740 R-OSI-9916309 CPK3 [plasma membrane] R-OSI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9916190 Root angle formation: elongation and curvature response none Oryza sativa Indica Group BGIOSGA004752 R-OSI-9639874 BGIOSGA004752 [plasma membrane] R-OSI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9639861 Development of root hair none Oryza sativa Indica Group BGIOSGA004768 R-OSI-9930212 BGIOSGA004768 [nucleoplasm] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA004775 R-OSI-5149632 BGIOSGA004775 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA004789 R-OSI-4415084 BGIOSGA004789 [cytosol] R-OSI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-3899351 Abscisic acid (ABA) mediated signaling none Oryza sativa Indica Group BGIOSGA004814 R-OSI-1124269 BGIOSGA004814 [cytosol] R-OSI-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119456 Brassinosteroid biosynthesis II none Oryza sativa Indica Group BGIOSGA004817 R-OSI-6787181 BGIOSGA004817 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA004825 R-OSI-9640886 BGIOSGA004825 [nucleoplasm] R-OSI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640882 Assembly of pre-replication complex none Oryza sativa Indica Group BGIOSGA004825 R-OSI-9640886 BGIOSGA004825 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA004826 R-OSI-8858070 BGIOSGA004826 [plasma membrane] R-OSI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9639861 Development of root hair none Oryza sativa Indica Group BGIOSGA004837 R-OSI-9930216 ABI5 [nucleoplasm] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA004878 R-OSI-9639111 BGIOSGA004878 [plasma membrane] R-OSI-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9639136 Response to Aluminum stress none Oryza sativa Indica Group BGIOSGA004889 R-OSI-5654756 BGIOSGA004889 [cytosol] R-OSI-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119281 Aspartate biosynthesis I none Oryza sativa Indica Group BGIOSGA004889 R-OSI-1123648 BGIOSGA004889 [plastid] R-OSI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119506 tyrosine degradation I none Oryza sativa Indica Group BGIOSGA004889 R-OSI-5631992 BGIOSGA004889 [plastid stroma] R-OSI-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119553 Asparagine biosynthesis none Oryza sativa Indica Group BGIOSGA004947 R-OSI-1124242 BGIOSGA004947 [plastid stroma] R-OSI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119464 Methylerythritol phosphate pathway none Oryza sativa Indica Group BGIOSGA004976 R-OSI-9675280 BGIOSGA004976 [nucleoplasm] R-OSI-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030680 Crown root development none Oryza sativa Indica Group BGIOSGA005055 R-OSI-8986863 BGIOSGA005055 [plasma membrane] R-OSI-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8986768 Anther and pollen development none Oryza sativa Indica Group BGIOSGA005070 R-OSI-9675500 BGIOSGA005070 [endoplasmic reticulum membrane] R-OSI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030654 Primary root development none Oryza sativa Indica Group BGIOSGA005099 R-OSI-1123690 BGIOSGA005099 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA005137 R-OSI-9025338 BGIOSGA005137 [cytosol] R-OSI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119402 Phospholipid biosynthesis I none Oryza sativa Indica Group BGIOSGA005267 R-OSI-9766887 BGIOSGA005267 [nucleoplasm] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA005283 R-OSI-9826691 BGIOSGA005283 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA005300 R-OSI-1126305 BGIOSGA005300 [cytosol] R-OSI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119332 Jasmonic acid biosynthesis none Oryza sativa Indica Group BGIOSGA005317 R-OSI-9645872 BGIOSGA005317 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA005319 R-OSI-8933787 BGIOSGA005319 [nucleoplasm] R-OSI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8933811 Circadian rhythm none Oryza sativa Indica Group BGIOSGA005351 R-OSI-9639018 BGIOSGA005351 [cytosol] R-OSI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119434 Phytic acid biosynthesis (lipid-independent) none Oryza sativa Indica Group BGIOSGA005360 R-OSI-1128385 BGIOSGA005360 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA005432 R-OSI-9640704 BGIOSGA005432 [nucleoplasm] R-OSI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640882 Assembly of pre-replication complex none Oryza sativa Indica Group BGIOSGA005432 R-OSI-9640704 BGIOSGA005432 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA005432 R-OSI-9640704 BGIOSGA005432 [nucleoplasm] R-OSI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675824 DNA replication Initiation none Oryza sativa Indica Group BGIOSGA005467 R-OSI-9675354 BGIOSGA005467 [nucleoplasm] R-OSI-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675508 Root elongation none Oryza sativa Indica Group BGIOSGA005509 R-OSI-9675818 BGIOSGA005509 [nucleoplasm] R-OSI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675815 Leading strand synthesis none Oryza sativa Indica Group BGIOSGA005530 R-OSI-8933714 BGIOSGA005530 [nucleoplasm] R-OSI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8933811 Circadian rhythm none Oryza sativa Indica Group BGIOSGA005531 R-OSI-1130304 BGIOSGA005531 [cytosol] R-OSI-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119291 Nitrate assimilation none Oryza sativa Indica Group BGIOSGA005551 R-OSI-9928961 BGIOSGA005551 [nucleoplasm] R-OSI-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9928995 Drought escape (DE) via ABA-dependent pathway none Oryza sativa Indica Group BGIOSGA005557 R-OSI-9826606 BGIOSGA005557 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA005631 R-OSI-9918275 soluble Starch Synthase (SSII-2/SSIIb) [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA005632 R-OSI-1125755 BGIOSGA005632 [cytosol] R-OSI-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Oryza sativa Indica Group BGIOSGA005635 R-OSI-1122656 BGIOSGA005635 [endosome] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA005635 R-OSI-5679312 BGIOSGA005635 [plasma membrane] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA005663 R-OSI-9658702 BGIOSGA005663 [plastid stroma] R-OSI-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119297 Beta-alanine biosynthesis III none Oryza sativa Indica Group BGIOSGA005685 R-OSI-1128843 BGIOSGA005685 [mitochondrial matrix] R-OSI-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119337 Proline degradation none Oryza sativa Indica Group BGIOSGA005697 R-OSI-5632087 BGIOSGA005697 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA005733 R-OSI-1123913 BGIOSGA005733 [cytosol] R-OSI-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119300 Glycolipid desaturation none Oryza sativa Indica Group BGIOSGA005742 R-OSI-1125802 BGIOSGA005742 [cytosol] R-OSI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119615 Mevalonate pathway none Oryza sativa Indica Group BGIOSGA005743 R-OSI-9826666 BGIOSGA005743 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA005760 R-OSI-1125447 BGIOSGA005760 [plastid stroma] R-OSI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119509 Histidine biosynthesis I none Oryza sativa Indica Group BGIOSGA005767 R-OSI-1127815 BGIOSGA005767 [cytosol] R-OSI-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119450 Homocysteine biosynthesis none Oryza sativa Indica Group BGIOSGA005777 R-OSI-9924558 NCED1 [plastid] R-OSI-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Oryza sativa Indica Group BGIOSGA005785 R-OSI-9035614 BGIOSGA005785 [cytosol] R-OSI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9035605 Regulation of seed size none Oryza sativa Indica Group BGIOSGA005785 R-OSI-9035651 BGIOSGA005785 [nucleoplasm] R-OSI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9035605 Regulation of seed size none Oryza sativa Indica Group BGIOSGA005786 R-OSI-9826605 OsBRXL1 [plasma membrane] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA005786 R-OSI-9826610 OsBRXL1 [cytosol] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA005786 R-OSI-9826605 OsBRXL1 [plasma membrane] R-OSI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924451 Shoot (tiller) formation and regulation of tiller angle none Oryza sativa Indica Group BGIOSGA005786 R-OSI-9826610 OsBRXL1 [cytosol] R-OSI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924451 Shoot (tiller) formation and regulation of tiller angle none Oryza sativa Indica Group BGIOSGA005795 R-OSI-1129650 BGIOSGA005795 [cytosol] R-OSI-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119418 Suberin biosynthesis none Oryza sativa Indica Group BGIOSGA005817 R-OSI-1130181 BGIOSGA005817 [plastid stroma] R-OSI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119430 Chorismate biosynthesis none Oryza sativa Indica Group BGIOSGA005843 R-OSI-1129922 BGIOSGA005843 [plastid stroma] R-OSI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119464 Methylerythritol phosphate pathway none Oryza sativa Indica Group BGIOSGA005910 R-OSI-9025447 BGIOSGA005910 [cytosol] R-OSI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119325 Sphingolipid metabolism none Oryza sativa Indica Group BGIOSGA005914 R-OSI-1124032 BGIOSGA005914 [cytosol] R-OSI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119540 Leucine biosynthesis none Oryza sativa Indica Group BGIOSGA005930 R-OSI-9025699 BGIOSGA005930 [plasma membrane] R-OSI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8858053 Polar auxin transport none Oryza sativa Indica Group BGIOSGA005931 R-OSI-9025772 BGIOSGA005931 [plasma membrane] R-OSI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9025727 Iron uptake and transport in root vascular system none Oryza sativa Indica Group BGIOSGA005998 R-OSI-1129245 BGIOSGA005998 [cytosol] R-OSI-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119261 Salicylate biosynthesis none Oryza sativa Indica Group BGIOSGA005998 R-OSI-1129245 BGIOSGA005998 [cytosol] R-OSI-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119418 Suberin biosynthesis none Oryza sativa Indica Group BGIOSGA005998 R-OSI-1129245 BGIOSGA005998 [cytosol] R-OSI-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119582 Phenylpropanoid biosynthesis, initial reactions none Oryza sativa Indica Group BGIOSGA005999 R-OSI-1128045 BGIOSGA005999 [cytosol] R-OSI-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119261 Salicylate biosynthesis none Oryza sativa Indica Group BGIOSGA005999 R-OSI-1128045 BGIOSGA005999 [cytosol] R-OSI-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119418 Suberin biosynthesis none Oryza sativa Indica Group BGIOSGA005999 R-OSI-1128045 BGIOSGA005999 [cytosol] R-OSI-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119582 Phenylpropanoid biosynthesis, initial reactions none Oryza sativa Indica Group BGIOSGA006000 R-OSI-1124767 BGIOSGA006000 [cytosol] R-OSI-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119261 Salicylate biosynthesis none Oryza sativa Indica Group BGIOSGA006000 R-OSI-1124767 BGIOSGA006000 [cytosol] R-OSI-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119418 Suberin biosynthesis none Oryza sativa Indica Group BGIOSGA006000 R-OSI-1124767 BGIOSGA006000 [cytosol] R-OSI-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119582 Phenylpropanoid biosynthesis, initial reactions none Oryza sativa Indica Group BGIOSGA006005 R-OSI-8879002 BGIOSGA006005 [nucleoplasm] R-OSI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8879007 Response to cold temperature none Oryza sativa Indica Group BGIOSGA006089 R-OSI-1126689 BGIOSGA006089 [cytosol] R-OSI-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119353 Linear furanocoumarin biosynthesis none Oryza sativa Indica Group BGIOSGA006093 R-OSI-1124778 BGIOSGA006093 [plastid stroma] R-OSI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119464 Methylerythritol phosphate pathway none Oryza sativa Indica Group BGIOSGA006117 R-OSI-1124688 BGIOSGA006117 [cytosol] R-OSI-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119295 Homoserine biosynthesis none Oryza sativa Indica Group BGIOSGA006128 R-OSI-1126662 BGIOSGA006128 [mitochondrial matrix] R-OSI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119533 TCA cycle (plant) none Oryza sativa Indica Group BGIOSGA006128 R-OSI-1126662 BGIOSGA006128 [mitochondrial matrix] R-OSI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119540 Leucine biosynthesis none Oryza sativa Indica Group BGIOSGA006136 R-OSI-9658661 BGIOSGA006136 [cytosol] R-OSI-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119567 Beta-alanine biosynthesis I none Oryza sativa Indica Group BGIOSGA006175 R-OSI-9025439 BGIOSGA006175 [endoplasmic reticulum membrane] R-OSI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119325 Sphingolipid metabolism none Oryza sativa Indica Group BGIOSGA006207 R-OSI-1128950 BGIOSGA006207 [cytosol] R-OSI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119379 Flavin biosynthesis none Oryza sativa Indica Group BGIOSGA006213 R-OSI-9610718 BGIOSGA006213 [plastid stroma] R-OSI-9610720 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9610720 Oryzalide A biosynthesis none Oryza sativa Indica Group BGIOSGA006225 R-OSI-1128319 BGIOSGA006225 [cytosol] R-OSI-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119341 Galactosylcyclitol biosynthesis none Oryza sativa Indica Group BGIOSGA006239 R-OSI-1123255 BGIOSGA006239 [cytosol] R-OSI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119506 tyrosine degradation I none Oryza sativa Indica Group BGIOSGA006275 R-OSI-1129068 BGIOSGA006275 [cytosol] R-OSI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119460 Isoleucine biosynthesis from threonine none Oryza sativa Indica Group BGIOSGA006275 R-OSI-1129068 BGIOSGA006275 [cytosol] R-OSI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119600 Valine biosynthesis none Oryza sativa Indica Group BGIOSGA006279 R-OSI-9675481 BGIOSGA006279 [cytosol] R-OSI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030654 Primary root development none Oryza sativa Indica Group BGIOSGA006304 R-OSI-9640739 BGIOSGA006304 [nucleoplasm] R-OSI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640887 G1/S transition none Oryza sativa Indica Group BGIOSGA006341 R-OSI-5655094 BGIOSGA006341 [Golgi lumen] R-OSI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5655101 Xyloglucan biosynthesis none Oryza sativa Indica Group BGIOSGA006344 R-OSI-1124067 BGIOSGA006344 [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA006344 R-OSI-9626520 BGIOSGA006344 [plastid stroma] R-OSI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9626305 Regulatory network of nutrient accumulation none Oryza sativa Indica Group BGIOSGA006507 R-OSI-1123867 BGIOSGA006507 [cytosol] R-OSI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119370 Sterol biosynthesis none Oryza sativa Indica Group BGIOSGA006554 R-OSI-1127738 BGIOSGA006554 [cytosol] R-OSI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119273 Lysine biosynthesis I none Oryza sativa Indica Group BGIOSGA006554 R-OSI-1127738 BGIOSGA006554 [cytosol] R-OSI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119283 Lysine biosynthesis II none Oryza sativa Indica Group BGIOSGA006554 R-OSI-5606514 BGIOSGA006554 [plastid stroma] R-OSI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119419 Lysine biosynthesis VI none Oryza sativa Indica Group BGIOSGA006555 R-OSI-1127738-2 BGIOSGA006555 [cytosol] R-OSI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119273 Lysine biosynthesis I none Oryza sativa Indica Group BGIOSGA006555 R-OSI-1127738-2 BGIOSGA006555 [cytosol] R-OSI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119283 Lysine biosynthesis II none Oryza sativa Indica Group BGIOSGA006555 R-OSI-5606514-2 BGIOSGA006555 [plastid stroma] R-OSI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119419 Lysine biosynthesis VI none Oryza sativa Indica Group BGIOSGA006560 R-OSI-1129184 BGIOSGA006560 [cytosol] R-OSI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119273 Lysine biosynthesis I none Oryza sativa Indica Group BGIOSGA006560 R-OSI-1129184 BGIOSGA006560 [cytosol] R-OSI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119283 Lysine biosynthesis II none Oryza sativa Indica Group BGIOSGA006560 R-OSI-5606505 BGIOSGA006560 [plastid stroma] R-OSI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119419 Lysine biosynthesis VI none Oryza sativa Indica Group BGIOSGA006606 R-OSI-6787934 BGIOSGA006606 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA006694 R-OSI-1128244 BGIOSGA006694 [chloroplast] R-OSI-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119348 Ent-kaurene biosynthesis none Oryza sativa Indica Group BGIOSGA006700 R-OSI-3321262 BGIOSGA006700 [chloroplast stroma] R-OSI-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119287 Vitamin E biosynthesis none Oryza sativa Indica Group BGIOSGA006796 R-OSI-4415060 BGIOSGA006796 [plasma membrane] R-OSI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-3899351 Abscisic acid (ABA) mediated signaling none Oryza sativa Indica Group BGIOSGA006796 R-OSI-4415065 phospho-BGIOSGA006796 [plasma membrane] R-OSI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-3899351 Abscisic acid (ABA) mediated signaling none Oryza sativa Indica Group BGIOSGA006827 R-OSI-5632312 BGIOSGA006827 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA006827 R-OSI-5632125 phospho-BGIOSGA006827 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA006827 R-OSI-5632342 phospho-BGIOSGA006827 [cytosol] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA006827 R-OSI-5632312 BGIOSGA006827 [nucleoplasm] R-OSI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5679411 Gibberellin signaling none Oryza sativa Indica Group BGIOSGA006828 R-OSI-9618197 BGIOSGA006828 [plasma membrane] R-OSI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9618218 Arsenic uptake and detoxification none Oryza sativa Indica Group BGIOSGA006838 R-OSI-1130347 BGIOSGA006838 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA006852 R-OSI-5632264 BGIOSGA006852 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA006854 R-OSI-5367743 BGIOSGA006854 [cytosol] R-OSI-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5367729 Strigolactone biosynthesis none Oryza sativa Indica Group BGIOSGA006874 R-OSI-6787113 BGIOSGA006874 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA006900 R-OSI-1122701 BGIOSGA006900 [cytosol] R-OSI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119473 Cytokinins-O-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA006902 R-OSI-1129078 BGIOSGA006902 [cytosol] R-OSI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119473 Cytokinins-O-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA006905 R-OSI-1124088 BGIOSGA006905 [cytosol] R-OSI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119473 Cytokinins-O-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA006916 R-OSI-8933766 BGIOSGA006916 [nucleoplasm] R-OSI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8933811 Circadian rhythm none Oryza sativa Indica Group BGIOSGA006951 R-OSI-1122849 BGIOSGA006951 [mitochondrion] R-OSI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119506 tyrosine degradation I none Oryza sativa Indica Group BGIOSGA006958 R-OSI-1129769 BGIOSGA006958 [cytosol] R-OSI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119332 Jasmonic acid biosynthesis none Oryza sativa Indica Group BGIOSGA006958 R-OSI-1129769 BGIOSGA006958 [cytosol] R-OSI-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119618 13-LOX and 13-HPL pathway none Oryza sativa Indica Group BGIOSGA006961 R-OSI-1129055 BGIOSGA006961 [mitochondrial matrix] R-OSI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119533 TCA cycle (plant) none Oryza sativa Indica Group BGIOSGA006982 R-OSI-1122832 BGIOSGA006982 [plastid stroma] R-OSI-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119449 Carotenoid biosynthesis none Oryza sativa Indica Group BGIOSGA007019 R-OSI-1130344 BGIOSGA007019 [cytosol] R-OSI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119389 Phenylalanine biosynthesis I none Oryza sativa Indica Group BGIOSGA007125 R-OSI-9920292 BGIOSGA007125 [nucleoplasm] R-OSI-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934108 Short day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA007152 R-OSI-1130281 BGIOSGA007152 [cytosol] R-OSI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119574 UDP-L-arabinose biosynthesis and transport none Oryza sativa Indica Group BGIOSGA007187 R-OSI-9639121 BGIOSGA007187 [plasma membrane] R-OSI-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9639136 Response to Aluminum stress none Oryza sativa Indica Group BGIOSGA007189 R-OSI-1130162 BGIOSGA007189 [chloroplast] R-OSI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119494 Tryptophan biosynthesis none Oryza sativa Indica Group BGIOSGA007203 R-OSI-1124520 BGIOSGA007203 [cytosol] R-OSI-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119278 PRPP biosynthesis I none Oryza sativa Indica Group BGIOSGA007208 R-OSI-1124939 BGIOSGA007208 [cytosol] R-OSI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119540 Leucine biosynthesis none Oryza sativa Indica Group BGIOSGA007277 R-OSI-1126436 BGIOSGA007277 [cytosol] R-OSI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119615 Mevalonate pathway none Oryza sativa Indica Group BGIOSGA007314 R-OSI-8987448 BGIOSGA007314 [peroxisomal matrix] R-OSI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119312 Photorespiration none Oryza sativa Indica Group BGIOSGA007328 R-OSI-9618057 BGIOSGA007328 [cytosol] R-OSI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9618218 Arsenic uptake and detoxification none Oryza sativa Indica Group BGIOSGA007337 R-OSI-5633332 BGIOSGA007337 [plastid stroma] R-OSI-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5633340 Citrulline-nitric oxide cycle none Oryza sativa Indica Group BGIOSGA007345 R-OSI-1126888 BGIOSGA007345 [cytosol] R-OSI-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119360 Fructan biosynthesis none Oryza sativa Indica Group BGIOSGA007352 R-OSI-1125446 BGIOSGA007352 [cytosol] R-OSI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119615 Mevalonate pathway none Oryza sativa Indica Group BGIOSGA007401 R-OSI-8854445 BGIOSGA007401 [cytosol] R-OSI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119276 Choline biosynthesis III none Oryza sativa Indica Group BGIOSGA007410 R-OSI-9675293 BGIOSGA007410 [nucleoplasm] R-OSI-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030557 Lateral root initiation none Oryza sativa Indica Group BGIOSGA007413 R-OSI-1122433 BGIOSGA007413 [mitochondrial inner membrane] R-OSI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119533 TCA cycle (plant) none Oryza sativa Indica Group BGIOSGA007417 R-OSI-9640697 phospho-BGIOSGA007417 [nucleoplasm] R-OSI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640760 G1 phase none Oryza sativa Indica Group BGIOSGA007417 R-OSI-9640660 BGIOSGA007417 [nucleoplasm] R-OSI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640760 G1 phase none Oryza sativa Indica Group BGIOSGA007417 R-OSI-9640697 phospho-BGIOSGA007417 [nucleoplasm] R-OSI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640887 G1/S transition none Oryza sativa Indica Group BGIOSGA007475 R-OSI-1122347 BGIOSGA007475 [cytosol] R-OSI-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119384 NAD biosynthesis I (from aspartate) none Oryza sativa Indica Group BGIOSGA007514 R-OSI-1124583 BGIOSGA007514 [cytosol] R-OSI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119465 Sucrose biosynthesis none Oryza sativa Indica Group BGIOSGA007538 R-OSI-1126034 BGIOSGA007538 [cytosol] R-OSI-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119534 Pyridoxal 5'-phosphate salvage pathway none Oryza sativa Indica Group BGIOSGA007538 R-OSI-1126034 BGIOSGA007538 [cytosol] R-OSI-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119594 Pyridoxal 5'-phosphate biosynthesis none Oryza sativa Indica Group BGIOSGA007539 R-OSI-6787224 BGIOSGA007539 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA007539 R-OSI-6787146 BGIOSGA007539 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA007551 R-OSI-8933832 BGIOSGA007551 [nucleoplasm] R-OSI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8933811 Circadian rhythm none Oryza sativa Indica Group BGIOSGA007558 R-OSI-8987460 BGIOSGA007558 [chloroplast] R-OSI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119312 Photorespiration none Oryza sativa Indica Group BGIOSGA007568 R-OSI-9618085 BGIOSGA007568 [cytosol] R-OSI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9618218 Arsenic uptake and detoxification none Oryza sativa Indica Group BGIOSGA007614 R-OSI-1128626 BGIOSGA007614 [cytosol] R-OSI-1119581 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119581 Thiosulfate disproportionation III (rhodanese) none Oryza sativa Indica Group BGIOSGA007622 R-OSI-4827041 BGIOSGA007622 [plastid stroma] R-OSI-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-4827054 Tetrapyrrole biosynthesis I none Oryza sativa Indica Group BGIOSGA007623 R-OSI-5149657 BGIOSGA007623 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA007623 R-OSI-1129239 BGIOSGA007623 [cytosol] R-OSI-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119570 Cytosolic glycolysis none Oryza sativa Indica Group BGIOSGA007628 R-OSI-1125241 BGIOSGA007628 [cytosol] R-OSI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119273 Lysine biosynthesis I none Oryza sativa Indica Group BGIOSGA007628 R-OSI-1125241 BGIOSGA007628 [cytosol] R-OSI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119283 Lysine biosynthesis II none Oryza sativa Indica Group BGIOSGA007637 R-OSI-6787138 BGIOSGA007637 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA007637 R-OSI-6787092 BGIOSGA007637 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA007638 R-OSI-1125187 BGIOSGA007638 [cytosol] R-OSI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119276 Choline biosynthesis III none Oryza sativa Indica Group BGIOSGA007641 R-OSI-1129846 BGIOSGA007641 [mitochondrion] R-OSI-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119337 Proline degradation none Oryza sativa Indica Group BGIOSGA007641 R-OSI-1129846 BGIOSGA007641 [mitochondrion] R-OSI-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119458 Glutamate degradation none Oryza sativa Indica Group BGIOSGA007670 R-OSI-6787130 BGIOSGA007670 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA007670 R-OSI-6787130 BGIOSGA007670 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA007680 R-OSI-1125090 BGIOSGA007680 [cytosol] R-OSI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119465 Sucrose biosynthesis none Oryza sativa Indica Group BGIOSGA007750 R-OSI-9918179 BGIOSGA007750 [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA007852 R-OSI-1127442 BGIOSGA007852 [cytosol] R-OSI-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119281 Aspartate biosynthesis I none Oryza sativa Indica Group BGIOSGA007852 R-OSI-5632001 BGIOSGA007852 [plastid stroma] R-OSI-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119553 Asparagine biosynthesis none Oryza sativa Indica Group BGIOSGA007921 R-OSI-5654827 BGIOSGA007921 [nucleoplasm] R-OSI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5654828 Strigolactone signaling none Oryza sativa Indica Group BGIOSGA007953 R-OSI-5633387 BGIOSGA007953 [mitochondrial matrix] R-OSI-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119445 Beta-alanine biosynthesis II none Oryza sativa Indica Group BGIOSGA008004 R-OSI-9684723 BGIOSGA008004 [cytosol] R-OSI-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9609102 Flower development none Oryza sativa Indica Group BGIOSGA008025 R-OSI-1123610 BGIOSGA008025 [cytosol] R-OSI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119389 Phenylalanine biosynthesis I none Oryza sativa Indica Group BGIOSGA008025 R-OSI-1123610 BGIOSGA008025 [cytosol] R-OSI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119400 Methionine biosynthesis II none Oryza sativa Indica Group BGIOSGA008025 R-OSI-1123610 BGIOSGA008025 [cytosol] R-OSI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119506 tyrosine degradation I none Oryza sativa Indica Group BGIOSGA008027 R-OSI-1126730 BGIOSGA008027 [cytosol] R-OSI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119389 Phenylalanine biosynthesis I none Oryza sativa Indica Group BGIOSGA008027 R-OSI-1126730 BGIOSGA008027 [cytosol] R-OSI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119400 Methionine biosynthesis II none Oryza sativa Indica Group BGIOSGA008027 R-OSI-1126730 BGIOSGA008027 [cytosol] R-OSI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119506 tyrosine degradation I none Oryza sativa Indica Group BGIOSGA008092 R-OSI-1125766 BGIOSGA008092 [cytosol] R-OSI-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119557 GA12 biosynthesis none Oryza sativa Indica Group BGIOSGA008108 R-OSI-5654913 BGIOSGA008108 [Golgi lumen] R-OSI-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5654909 Xylan biosynthesis none Oryza sativa Indica Group BGIOSGA008122 R-OSI-9639957 BGIOSGA008122 [plasma membrane] R-OSI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9639861 Development of root hair none Oryza sativa Indica Group BGIOSGA008165 R-OSI-6788065 BGIOSGA008165 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA008174 R-OSI-9639003 BGIOSGA008174 [cytosol] R-OSI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119434 Phytic acid biosynthesis (lipid-independent) none Oryza sativa Indica Group BGIOSGA008236 R-OSI-1130049 BGIOSGA008236 [cytosol] R-OSI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119473 Cytokinins-O-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA008288 R-OSI-1127382 BGIOSGA008288 [cytosol] R-OSI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119460 Isoleucine biosynthesis from threonine none Oryza sativa Indica Group BGIOSGA008288 R-OSI-1127382 BGIOSGA008288 [cytosol] R-OSI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119600 Valine biosynthesis none Oryza sativa Indica Group BGIOSGA008331 R-OSI-9638997 BGIOSGA008331 [cytosol] R-OSI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119434 Phytic acid biosynthesis (lipid-independent) none Oryza sativa Indica Group BGIOSGA008343 R-OSI-1124285 BGIOSGA008343 [cytosol] R-OSI-1119284 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119284 Coumarin biosynthesis (via 2-coumarate) none Oryza sativa Indica Group BGIOSGA008359 R-OSI-1125374 BGIOSGA008359 [cytosol] R-OSI-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119586 Cyanate degradation none Oryza sativa Indica Group BGIOSGA008362 R-OSI-1127065 BGIOSGA008362 [cytosol] R-OSI-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119304 Putrescine biosynthesis II none Oryza sativa Indica Group BGIOSGA008385 R-OSI-8854121 BGIOSGA008385 [cytosol] R-OSI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119556 Choline biosynthesis I none Oryza sativa Indica Group BGIOSGA008429 R-OSI-1125309 BGIOSGA008429 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA008467 R-OSI-1129220 BGIOSGA008467 [cytosol] R-OSI-1119583 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119583 Phytocassane biosynthesis none Oryza sativa Indica Group BGIOSGA008468 R-OSI-9610713 BGIOSGA008468 [plastid membrane] R-OSI-9610720 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9610720 Oryzalide A biosynthesis none Oryza sativa Indica Group BGIOSGA008474 R-OSI-8933710 BGIOSGA008474 [nucleoplasm] R-OSI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8933811 Circadian rhythm none Oryza sativa Indica Group BGIOSGA008489 R-OSI-1122564 BGIOSGA008489 [cytosol] R-OSI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119473 Cytokinins-O-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA008492 R-OSI-9826687 BGIOSGA008492 [nucleoplasm] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA008492 R-OSI-9826687 BGIOSGA008492 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA008496 R-OSI-5632238 BGIOSGA008496 [cytosol] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA008564 R-OSI-1126647 BGIOSGA008564 [cytosol] R-OSI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119273 Lysine biosynthesis I none Oryza sativa Indica Group BGIOSGA008564 R-OSI-1126647 BGIOSGA008564 [cytosol] R-OSI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119283 Lysine biosynthesis II none Oryza sativa Indica Group BGIOSGA008596 R-OSI-1124523 BGIOSGA008596 [cytosol] R-OSI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119460 Isoleucine biosynthesis from threonine none Oryza sativa Indica Group BGIOSGA008596 R-OSI-1124523 BGIOSGA008596 [cytosol] R-OSI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119600 Valine biosynthesis none Oryza sativa Indica Group BGIOSGA008605 R-OSI-8934060 BGIOSGA008605 [nucleoplasm] R-OSI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934036 Long day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA008605 R-OSI-8934060 BGIOSGA008605 [nucleoplasm] R-OSI-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934108 Short day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA008609 R-OSI-1128431 BGIOSGA008609 [cytosol] R-OSI-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119316 Phenylpropanoid biosynthesis none Oryza sativa Indica Group BGIOSGA008633 R-OSI-8933833 BGIOSGA008633 [nucleoplasm] R-OSI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8933811 Circadian rhythm none Oryza sativa Indica Group BGIOSGA008633 R-OSI-8933833 BGIOSGA008633 [nucleoplasm] R-OSI-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9928995 Drought escape (DE) via ABA-dependent pathway none Oryza sativa Indica Group BGIOSGA008643 R-OSI-1129896 BGIOSGA008643 [mitochondrial matrix] R-OSI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119533 TCA cycle (plant) none Oryza sativa Indica Group BGIOSGA008648 R-OSI-8933738 BGIOSGA008648 [nucleoplasm] R-OSI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8933811 Circadian rhythm none Oryza sativa Indica Group BGIOSGA008680 R-OSI-1125730 BGIOSGA008680 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA008691 R-OSI-9025541 BGIOSGA008691 [endoplasmic reticulum membrane] R-OSI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119325 Sphingolipid metabolism none Oryza sativa Indica Group BGIOSGA008716 R-OSI-9826692 BGIOSGA008716 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA008735 R-OSI-1126053 BGIOSGA008735 [mitochondrial matrix] R-OSI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119479 Valine degradation none Oryza sativa Indica Group BGIOSGA008749 R-OSI-5138484 BGIOSGA008749 [plastid stroma] R-OSI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119263 Arginine biosynthesis none Oryza sativa Indica Group BGIOSGA008749 R-OSI-5138484 BGIOSGA008749 [plastid stroma] R-OSI-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119539 Ornithine biosynthesis none Oryza sativa Indica Group BGIOSGA008749 R-OSI-5138484 BGIOSGA008749 [plastid stroma] R-OSI-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119622 Arginine biosynthesis II (acetyl cycle) none Oryza sativa Indica Group BGIOSGA008765 R-OSI-1125474 BGIOSGA008765 [cytosol] R-OSI-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119437 Glutathione redox reactions I none Oryza sativa Indica Group BGIOSGA008802 R-OSI-9826696 BGIOSGA008802 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA008804 R-OSI-8879029 DREB1G [nucleoplasm] R-OSI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8879007 Response to cold temperature none Oryza sativa Indica Group BGIOSGA008811 R-OSI-9608680 BGIOSGA008811 [nucleoplasm] R-OSI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9608575 Reproductive meristem phase change none Oryza sativa Indica Group BGIOSGA008811 R-OSI-9608583 BGIOSGA008811 [cytosol] R-OSI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9608575 Reproductive meristem phase change none Oryza sativa Indica Group BGIOSGA008829 R-OSI-5221151 BGIOSGA008829 [cytosol] R-OSI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-3899351 Abscisic acid (ABA) mediated signaling none Oryza sativa Indica Group BGIOSGA008844 R-OSI-5138481 BGIOSGA008844 [plastid stroma] R-OSI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119263 Arginine biosynthesis none Oryza sativa Indica Group BGIOSGA008844 R-OSI-5138481 BGIOSGA008844 [plastid stroma] R-OSI-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119539 Ornithine biosynthesis none Oryza sativa Indica Group BGIOSGA008865 R-OSI-5149678 BGIOSGA008865 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA008877 R-OSI-3321260 BGIOSGA008877 [chloroplast stroma] R-OSI-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119287 Vitamin E biosynthesis none Oryza sativa Indica Group BGIOSGA008878 R-OSI-9025500 BGIOSGA008878 [endoplasmic reticulum membrane] R-OSI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119325 Sphingolipid metabolism none Oryza sativa Indica Group BGIOSGA008883 R-OSI-1128857 BGIOSGA008883 [cytosol] R-OSI-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119609 Phaseic acid biosynthesis none Oryza sativa Indica Group BGIOSGA008886 R-OSI-5138486 BGIOSGA008886 [plastid stroma] R-OSI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119263 Arginine biosynthesis none Oryza sativa Indica Group BGIOSGA008886 R-OSI-1123709 BGIOSGA008886 [cytosol] R-OSI-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119318 Proline biosynthesis V (from arginine) none Oryza sativa Indica Group BGIOSGA008886 R-OSI-1123709 BGIOSGA008886 [cytosol] R-OSI-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119444 Canavanine biosynthesis none Oryza sativa Indica Group BGIOSGA008887 R-OSI-9916252 OsEGT1 [nucleoplasm] R-OSI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9916190 Root angle formation: elongation and curvature response none Oryza sativa Indica Group BGIOSGA008894 R-OSI-5633270 BGIOSGA008894 [cytosol] R-OSI-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119495 Citrulline biosynthesis none Oryza sativa Indica Group BGIOSGA008915 R-OSI-1123092 BGIOSGA008915 [cytosol] R-OSI-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119278 PRPP biosynthesis I none Oryza sativa Indica Group BGIOSGA008928 R-OSI-2960780 BGIOSGA008928 [cytosol] R-OSI-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119386 UDP-N-acetylgalactosamine biosynthesis none Oryza sativa Indica Group BGIOSGA008952 R-OSI-5655075 BGIOSGA008952 [Golgi lumen] R-OSI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5655101 Xyloglucan biosynthesis none Oryza sativa Indica Group BGIOSGA008953 R-OSI-1122851 BGIOSGA008953 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA008969 R-OSI-9025482 BGIOSGA008969 [endoplasmic reticulum membrane] R-OSI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119325 Sphingolipid metabolism none Oryza sativa Indica Group BGIOSGA008983 R-OSI-9924576 OsMADS57 [nucleoplasm] R-OSI-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Oryza sativa Indica Group BGIOSGA009042 R-OSI-1122261 BGIOSGA009042 [plastid stroma] R-OSI-1119602 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119602 Phytyl-PP biosynthesis none Oryza sativa Indica Group BGIOSGA009042 R-OSI-1122261 BGIOSGA009042 [plastid stroma] R-OSI-1119605 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119605 Chlorophyll a biosynthesis II none Oryza sativa Indica Group BGIOSGA009043 R-OSI-9618131 BGIOSGA009043 [plasma membrane] R-OSI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9618218 Arsenic uptake and detoxification none Oryza sativa Indica Group BGIOSGA009047 R-OSI-9025498 BGIOSGA009047 [endoplasmic reticulum membrane] R-OSI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119325 Sphingolipid metabolism none Oryza sativa Indica Group BGIOSGA009055 R-OSI-1127429 BGIOSGA009055 [plastid stroma] R-OSI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119430 Chorismate biosynthesis none Oryza sativa Indica Group BGIOSGA009079 R-OSI-1124797 BGIOSGA009079 [cytosol] R-OSI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119473 Cytokinins-O-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA009088 R-OSI-5679294 BGIOSGA009088 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA009097 R-OSI-9630306 BGIOSGA009097 [nucleoplasm] R-OSI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640760 G1 phase none Oryza sativa Indica Group BGIOSGA009104 R-OSI-5655106 BGIOSGA009104 [Golgi lumen] R-OSI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5655101 Xyloglucan biosynthesis none Oryza sativa Indica Group BGIOSGA009105 R-OSI-5655076 BGIOSGA009105 [Golgi lumen] R-OSI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5655101 Xyloglucan biosynthesis none Oryza sativa Indica Group BGIOSGA009181 R-OSI-1123210 BGIOSGA009181 [cytosol] R-OSI-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119516 Trehalose biosynthesis I none Oryza sativa Indica Group BGIOSGA009184 R-OSI-1129203 BGIOSGA009184 [cytosol] R-OSI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119428 GDP-D-rhamnose biosynthesis none Oryza sativa Indica Group BGIOSGA009184 R-OSI-1129203 BGIOSGA009184 [cytosol] R-OSI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Oryza sativa Indica Group BGIOSGA009209 R-OSI-1123797 BGIOSGA009209 [cytosol] R-OSI-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119281 Aspartate biosynthesis I none Oryza sativa Indica Group BGIOSGA009209 R-OSI-5632003 BGIOSGA009209 [plastid stroma] R-OSI-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119553 Asparagine biosynthesis none Oryza sativa Indica Group BGIOSGA009237 R-OSI-1127247 BGIOSGA009237 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA009238 R-OSI-9640689 BGIOSGA009238 [nucleoplasm] R-OSI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675782 Maturation none Oryza sativa Indica Group BGIOSGA009238 R-OSI-9640689 BGIOSGA009238 [nucleoplasm] R-OSI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675815 Leading strand synthesis none Oryza sativa Indica Group BGIOSGA009238 R-OSI-9640689 BGIOSGA009238 [nucleoplasm] R-OSI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675885 Lagging strand synthesis none Oryza sativa Indica Group BGIOSGA009243 R-OSI-9025513 BGIOSGA009243 [endoplasmic reticulum membrane] R-OSI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119325 Sphingolipid metabolism none Oryza sativa Indica Group BGIOSGA009243 R-OSI-1129700 BGIOSGA009243 [cytosol] R-OSI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119610 Biotin biosynthesis II none Oryza sativa Indica Group BGIOSGA009246 R-OSI-1126190 BGIOSGA009246 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA009272 R-OSI-1129113 BGIOSGA009272 [cytosol] R-OSI-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119298 Glutathione redox reactions II none Oryza sativa Indica Group BGIOSGA009272 R-OSI-1129113 BGIOSGA009272 [cytosol] R-OSI-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119437 Glutathione redox reactions I none Oryza sativa Indica Group BGIOSGA009283 R-OSI-1128327 BGIOSGA009283 [cytosol] R-OSI-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119267 Phenylalanine degradation III none Oryza sativa Indica Group BGIOSGA009342 R-OSI-9826597 BGIOSGA009342 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA009348 R-OSI-1128766 BGIOSGA009348 [cytosol] R-OSI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119452 Galactose degradation II none Oryza sativa Indica Group BGIOSGA009348 R-OSI-1128766 BGIOSGA009348 [cytosol] R-OSI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119465 Sucrose biosynthesis none Oryza sativa Indica Group BGIOSGA009350 R-OSI-1125974 BGIOSGA009350 [cytosol] R-OSI-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119262 Threonine biosynthesis from homoserine none Oryza sativa Indica Group BGIOSGA009350 R-OSI-1125974 BGIOSGA009350 [cytosol] R-OSI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119400 Methionine biosynthesis II none Oryza sativa Indica Group BGIOSGA009360 R-OSI-5679324 BGIOSGA009360 [cytosol] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA009362 R-OSI-9618112-2 BGIOSGA009362 [plasma membrane] R-OSI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9618218 Arsenic uptake and detoxification none Oryza sativa Indica Group BGIOSGA009363 R-OSI-9618112 BGIOSGA009363 [plasma membrane] R-OSI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9618218 Arsenic uptake and detoxification none Oryza sativa Indica Group BGIOSGA009376 R-OSI-5149683 BGIOSGA009376 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA009392 R-OSI-6787093 BGIOSGA009392 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA009526 R-OSI-1128656 BGIOSGA009526 [chloroplast] R-OSI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119494 Tryptophan biosynthesis none Oryza sativa Indica Group BGIOSGA009556 R-OSI-1124274 BGIOSGA009556 [cytosol] R-OSI-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119513 Pinobanksin biosynthesis none Oryza sativa Indica Group BGIOSGA009556 R-OSI-1124274 BGIOSGA009556 [cytosol] R-OSI-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119531 Flavonoid biosynthesis none Oryza sativa Indica Group BGIOSGA009600 R-OSI-1122861 BGIOSGA009600 [plasma membrane] R-OSI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119314 Cellulose biosynthesis none Oryza sativa Indica Group BGIOSGA009626 R-OSI-1125587 BGIOSGA009626 [cytosol] R-OSI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119379 Flavin biosynthesis none Oryza sativa Indica Group BGIOSGA009639 R-OSI-1129781 BGIOSGA009639 [chloroplast] R-OSI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119494 Tryptophan biosynthesis none Oryza sativa Indica Group BGIOSGA009640 R-OSI-1124676 BGIOSGA009640 [chloroplast] R-OSI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119494 Tryptophan biosynthesis none Oryza sativa Indica Group BGIOSGA009642 R-OSI-1128191 BGIOSGA009642 [chloroplast] R-OSI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119494 Tryptophan biosynthesis none Oryza sativa Indica Group BGIOSGA009665 R-OSI-9675838 BGIOSGA009665 [nucleoplasm] R-OSI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675815 Leading strand synthesis none Oryza sativa Indica Group BGIOSGA009667 R-OSI-1250411 BGIOSGA009667 [cytosol] R-OSI-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119374 Abscisic acid biosynthesis none Oryza sativa Indica Group BGIOSGA009667 R-OSI-1125915 BGIOSGA009667 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA009672 R-OSI-1250418 BGIOSGA009672 [cytosol] R-OSI-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119374 Abscisic acid biosynthesis none Oryza sativa Indica Group BGIOSGA009672 R-OSI-1128930 BGIOSGA009672 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA009714 R-OSI-1124484 BGIOSGA009714 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA009798 R-OSI-8934009 BGIOSGA009798 [nucleoplasm] R-OSI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934036 Long day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA009798 R-OSI-8934009 BGIOSGA009798 [nucleoplasm] R-OSI-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934257 Transition from vegetative to reproductive shoot apical meristem none Oryza sativa Indica Group BGIOSGA009798 R-OSI-8934009 BGIOSGA009798 [nucleoplasm] R-OSI-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9609102 Flower development none Oryza sativa Indica Group BGIOSGA009804 R-OSI-1126604 BGIOSGA009804 [cytosol] R-OSI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119438 Secologanin and strictosidine biosynthesis none Oryza sativa Indica Group BGIOSGA009834 R-OSI-1128257 BGIOSGA009834 [plastid stroma] R-OSI-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119529 Sulfate activation for sulfonation none Oryza sativa Indica Group BGIOSGA009837 R-OSI-1128092 BGIOSGA009837 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA009837 R-OSI-1128092 BGIOSGA009837 [nucleoplasm] R-OSI-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030557 Lateral root initiation none Oryza sativa Indica Group BGIOSGA009837 R-OSI-1128092 BGIOSGA009837 [nucleoplasm] R-OSI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030654 Primary root development none Oryza sativa Indica Group BGIOSGA009846 R-OSI-8879001 BGIOSGA009846 [nucleoplasm] R-OSI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8879007 Response to cold temperature none Oryza sativa Indica Group BGIOSGA009847 R-OSI-1125341 BGIOSGA009847 [cytosol] R-OSI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119460 Isoleucine biosynthesis from threonine none Oryza sativa Indica Group BGIOSGA009847 R-OSI-1125341 BGIOSGA009847 [cytosol] R-OSI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119600 Valine biosynthesis none Oryza sativa Indica Group BGIOSGA009855 R-OSI-1122398 BGIOSGA009855 [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA009856 R-OSI-6786984 BGIOSGA009856 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA009856 R-OSI-6787051 BGIOSGA009856 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA009861 R-OSI-9035785 BGIOSGA009861 [nucleoplasm] R-OSI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9035605 Regulation of seed size none Oryza sativa Indica Group BGIOSGA009861 R-OSI-9035785 BGIOSGA009861 [nucleoplasm] R-OSI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9608575 Reproductive meristem phase change none Oryza sativa Indica Group BGIOSGA009868 R-OSI-1128745 BGIOSGA009868 [plastid stroma] R-OSI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119464 Methylerythritol phosphate pathway none Oryza sativa Indica Group BGIOSGA009880 R-OSI-9631619 BGIOSGA009880 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA009886 R-OSI-1123895 BGIOSGA009886 [cytosol] R-OSI-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119334 Ethylene biosynthesis from methionine none Oryza sativa Indica Group BGIOSGA009886 R-OSI-1123895 BGIOSGA009886 [cytosol] R-OSI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119624 Methionine salvage pathway none Oryza sativa Indica Group BGIOSGA009906 R-OSI-8933842 BGIOSGA009906 [cytosol] R-OSI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8933811 Circadian rhythm none Oryza sativa Indica Group BGIOSGA009906 R-OSI-8933843 BGIOSGA009906 [nucleoplasm] R-OSI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8933811 Circadian rhythm none Oryza sativa Indica Group BGIOSGA009914 R-OSI-1128874 BGIOSGA009914 [chloroplast] R-OSI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119494 Tryptophan biosynthesis none Oryza sativa Indica Group BGIOSGA009926 R-OSI-1125564 BGIOSGA009926 [cytosol] R-OSI-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119291 Nitrate assimilation none Oryza sativa Indica Group BGIOSGA009926 R-OSI-1125564 BGIOSGA009926 [cytosol] R-OSI-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119293 Glutamine biosynthesis I none Oryza sativa Indica Group BGIOSGA009926 R-OSI-1125564 BGIOSGA009926 [cytosol] R-OSI-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119443 Ammonia assimilation cycle none Oryza sativa Indica Group BGIOSGA010036 R-OSI-6787127 BGIOSGA010036 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA010036 R-OSI-6787052 BGIOSGA010036 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA010086 R-OSI-9622269 BGIOSGA010086 [plasma membrane] R-OSI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9035605 Regulation of seed size none Oryza sativa Indica Group BGIOSGA010092 R-OSI-9025728 BGIOSGA010092 [plasma membrane] R-OSI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9025727 Iron uptake and transport in root vascular system none Oryza sativa Indica Group BGIOSGA010094 R-OSI-9025778 BGIOSGA010094 [plasma membrane] R-OSI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9025727 Iron uptake and transport in root vascular system none Oryza sativa Indica Group BGIOSGA010095 R-OSI-6788149 BGIOSGA010095 [cytosol] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA010154 R-OSI-5631953 BGIOSGA010154 [mitochondrial matrix] R-OSI-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119289 Arginine degradation none Oryza sativa Indica Group BGIOSGA010154 R-OSI-1124214 BGIOSGA010154 [cytosol] R-OSI-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119318 Proline biosynthesis V (from arginine) none Oryza sativa Indica Group BGIOSGA010154 R-OSI-1124214 BGIOSGA010154 [cytosol] R-OSI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119610 Biotin biosynthesis II none Oryza sativa Indica Group BGIOSGA010196 R-OSI-1122892 BGIOSGA010196 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA010196 R-OSI-1122892 BGIOSGA010196 [nucleoplasm] R-OSI-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030557 Lateral root initiation none Oryza sativa Indica Group BGIOSGA010238 R-OSI-5138509 BGIOSGA010238 [plastid stroma] R-OSI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119263 Arginine biosynthesis none Oryza sativa Indica Group BGIOSGA010238 R-OSI-1129397 BGIOSGA010238 [cytosol] R-OSI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119273 Lysine biosynthesis I none Oryza sativa Indica Group BGIOSGA010238 R-OSI-1129397 BGIOSGA010238 [cytosol] R-OSI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119283 Lysine biosynthesis II none Oryza sativa Indica Group BGIOSGA010238 R-OSI-1129397 BGIOSGA010238 [cytosol] R-OSI-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119295 Homoserine biosynthesis none Oryza sativa Indica Group BGIOSGA010238 R-OSI-5138509 BGIOSGA010238 [plastid stroma] R-OSI-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119539 Ornithine biosynthesis none Oryza sativa Indica Group BGIOSGA010238 R-OSI-5138509 BGIOSGA010238 [plastid stroma] R-OSI-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119622 Arginine biosynthesis II (acetyl cycle) none Oryza sativa Indica Group BGIOSGA010254 R-OSI-4415055 BGIOSGA010254 [cytosol] R-OSI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-3899351 Abscisic acid (ABA) mediated signaling none Oryza sativa Indica Group BGIOSGA010254 R-OSI-4415073 phospho-BGIOSGA010254 [cytosol] R-OSI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-3899351 Abscisic acid (ABA) mediated signaling none Oryza sativa Indica Group BGIOSGA010254 R-OSI-4415055 BGIOSGA010254 [cytosol] R-OSI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9639861 Development of root hair none Oryza sativa Indica Group BGIOSGA010277 R-OSI-9681869 BGIOSGA010277 [cytosol] R-OSI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119574 UDP-L-arabinose biosynthesis and transport none Oryza sativa Indica Group BGIOSGA010291 R-OSI-9681910 BGIOSGA010291 [Golgi membrane] R-OSI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119574 UDP-L-arabinose biosynthesis and transport none Oryza sativa Indica Group BGIOSGA010303 R-OSI-5654755 BGIOSGA010303 [cytosol] R-OSI-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119393 Asparagine degradation I none Oryza sativa Indica Group BGIOSGA010406 R-OSI-1122454 BGIOSGA010406 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA010464 R-OSI-1127526-2 BGIOSGA010464 [cytosol] R-OSI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119332 Jasmonic acid biosynthesis none Oryza sativa Indica Group BGIOSGA010465 R-OSI-1127526 BGIOSGA010465 [cytosol] R-OSI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119332 Jasmonic acid biosynthesis none Oryza sativa Indica Group BGIOSGA010468 R-OSI-9826656 ZFP36 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA010486 R-OSI-9658611 BGIOSGA010486 [plastid stroma] R-OSI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119263 Arginine biosynthesis none Oryza sativa Indica Group BGIOSGA010486 R-OSI-9658611 BGIOSGA010486 [plastid stroma] R-OSI-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119539 Ornithine biosynthesis none Oryza sativa Indica Group BGIOSGA010486 R-OSI-9658611 BGIOSGA010486 [plastid stroma] R-OSI-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119622 Arginine biosynthesis II (acetyl cycle) none Oryza sativa Indica Group BGIOSGA010559 R-OSI-5679428 BGIOSGA010559 [nucleoplasm] R-OSI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5679411 Gibberellin signaling none Oryza sativa Indica Group BGIOSGA010559 R-OSI-5679428 BGIOSGA010559 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA010559 R-OSI-6786910 BGIOSGA010559 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA010570 R-OSI-1124695 BGIOSGA010570 [cytosol] R-OSI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119452 Galactose degradation II none Oryza sativa Indica Group BGIOSGA010570 R-OSI-1124695 BGIOSGA010570 [cytosol] R-OSI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119465 Sucrose biosynthesis none Oryza sativa Indica Group BGIOSGA010585 R-OSI-6787176 BGIOSGA010585 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA010585 R-OSI-6787153 BGIOSGA010585 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA010605 R-OSI-9766892 SAPK1 [nucleoplasm] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA010770 R-OSI-1126115 BGIOSGA010770 [cytosol] R-OSI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119452 Galactose degradation II none Oryza sativa Indica Group BGIOSGA010770 R-OSI-1126115 BGIOSGA010770 [cytosol] R-OSI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119465 Sucrose biosynthesis none Oryza sativa Indica Group BGIOSGA010778 R-OSI-1126444 BGIOSGA010778 [cytosol] R-OSI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119610 Biotin biosynthesis II none Oryza sativa Indica Group BGIOSGA010779 R-OSI-1126830 BGIOSGA010779 [mitochondrial matrix] R-OSI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119533 TCA cycle (plant) none Oryza sativa Indica Group BGIOSGA010816 R-OSI-9930276 BGIOSGA010816 [nucleoplasm] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA010824 R-OSI-9924413 WOX6 [nucleoplasm] R-OSI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924451 Shoot (tiller) formation and regulation of tiller angle none Oryza sativa Indica Group BGIOSGA010844 R-OSI-6786916 BGIOSGA010844 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA010844 R-OSI-6787027 BGIOSGA010844 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA010850 R-OSI-6788172 BGIOSGA010850 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA010857 R-OSI-9031290 BGIOSGA010857 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA010884 R-OSI-9025712-2 BGIOSGA010884 [cytosol] R-OSI-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9025754 Mugineic acid biosynthesis none Oryza sativa Indica Group BGIOSGA010889 R-OSI-5655071 BGIOSGA010889 [Golgi lumen] R-OSI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5655101 Xyloglucan biosynthesis none Oryza sativa Indica Group BGIOSGA010910 R-OSI-9639810 BGIOSGA010910 [cell wall] R-OSI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9639861 Development of root hair none Oryza sativa Indica Group BGIOSGA010938 R-OSI-9025294 BGIOSGA010938 [cytosol] R-OSI-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119267 Phenylalanine degradation III none Oryza sativa Indica Group BGIOSGA010938 R-OSI-1123342 BGIOSGA010938 [cytosol] R-OSI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119460 Isoleucine biosynthesis from threonine none Oryza sativa Indica Group BGIOSGA010938 R-OSI-1123342 BGIOSGA010938 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA010938 R-OSI-1123342 BGIOSGA010938 [cytosol] R-OSI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119600 Valine biosynthesis none Oryza sativa Indica Group BGIOSGA010942 R-OSI-1128279 BGIOSGA010942 [cytosol] R-OSI-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119354 Asparagine biosynthesis III none Oryza sativa Indica Group BGIOSGA010942 R-OSI-1128279 BGIOSGA010942 [cytosol] R-OSI-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119553 Asparagine biosynthesis none Oryza sativa Indica Group BGIOSGA010945 R-OSI-1129351 BGIOSGA010945 [cytosol] R-OSI-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119300 Glycolipid desaturation none Oryza sativa Indica Group BGIOSGA010959 R-OSI-9675423 BGIOSGA010959 [nucleoplasm] R-OSI-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675508 Root elongation none Oryza sativa Indica Group BGIOSGA010959 R-OSI-9930290 MPK5 [nucleoplasm] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA010966 R-OSI-1130032 BGIOSGA010966 [mitochondrial inner membrane] R-OSI-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119260 Cardiolipin biosynthesis none Oryza sativa Indica Group BGIOSGA010989 R-OSI-9658613 BGIOSGA010989 [plastid stroma] R-OSI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119263 Arginine biosynthesis none Oryza sativa Indica Group BGIOSGA010989 R-OSI-9658613 BGIOSGA010989 [plastid stroma] R-OSI-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119622 Arginine biosynthesis II (acetyl cycle) none Oryza sativa Indica Group BGIOSGA011022 R-OSI-9916305 BGIOSGA011022 [nucleoplasm] R-OSI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9916190 Root angle formation: elongation and curvature response none Oryza sativa Indica Group BGIOSGA011032 R-OSI-4415078 BGIOSGA011032 [cytosol] R-OSI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-3899351 Abscisic acid (ABA) mediated signaling none Oryza sativa Indica Group BGIOSGA011034 R-OSI-1123261 BGIOSGA011034 [cytosol] R-OSI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119410 Ascorbate biosynthesis none Oryza sativa Indica Group BGIOSGA011043 R-OSI-1127082 BGIOSGA011043 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA011056 R-OSI-1123998 BGIOSGA011056 [chloroplast] R-OSI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119494 Tryptophan biosynthesis none Oryza sativa Indica Group BGIOSGA011057 R-OSI-9025430 BGIOSGA011057 [endoplasmic reticulum membrane] R-OSI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119325 Sphingolipid metabolism none Oryza sativa Indica Group BGIOSGA011058 R-OSI-1125989 BGIOSGA011058 [cytosol] R-OSI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119438 Secologanin and strictosidine biosynthesis none Oryza sativa Indica Group BGIOSGA011088 R-OSI-1130456 BGIOSGA011088 [plastid stroma] R-OSI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119430 Chorismate biosynthesis none Oryza sativa Indica Group BGIOSGA011089 R-OSI-5632157 BGIOSGA011089 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA011089 R-OSI-5632157 BGIOSGA011089 [nucleoplasm] R-OSI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5654828 Strigolactone signaling none Oryza sativa Indica Group BGIOSGA011098 R-OSI-9025453 BGIOSGA011098 [endoplasmic reticulum membrane] R-OSI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119325 Sphingolipid metabolism none Oryza sativa Indica Group BGIOSGA011194 R-OSI-1128804 BGIOSGA011194 [cytosol] R-OSI-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119516 Trehalose biosynthesis I none Oryza sativa Indica Group BGIOSGA011196 R-OSI-1127192 BGIOSGA011196 [cytosol] R-OSI-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119291 Nitrate assimilation none Oryza sativa Indica Group BGIOSGA011196 R-OSI-1127192 BGIOSGA011196 [cytosol] R-OSI-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119293 Glutamine biosynthesis I none Oryza sativa Indica Group BGIOSGA011196 R-OSI-1127192 BGIOSGA011196 [cytosol] R-OSI-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119443 Ammonia assimilation cycle none Oryza sativa Indica Group BGIOSGA011213 R-OSI-9608933 BGIOSGA011213 [nucleoplasm] R-OSI-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9609102 Flower development none Oryza sativa Indica Group BGIOSGA011276 R-OSI-9826620 HOX12/ OsGT1 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA011276 R-OSI-9826620 HOX12/ OsGT1 [nucleoplasm] R-OSI-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Oryza sativa Indica Group BGIOSGA011282 R-OSI-1127528 BGIOSGA011282 [cytosol] R-OSI-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119331 Cysteine biosynthesis I none Oryza sativa Indica Group BGIOSGA011293 R-OSI-1129964 BGIOSGA011293 [cytosol] R-OSI-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119378 Myo-inositol biosynthesis none Oryza sativa Indica Group BGIOSGA011293 R-OSI-1129964 BGIOSGA011293 [cytosol] R-OSI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119434 Phytic acid biosynthesis (lipid-independent) none Oryza sativa Indica Group BGIOSGA011306 R-OSI-1122295 BGIOSGA011306 [cytosol] R-OSI-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119353 Linear furanocoumarin biosynthesis none Oryza sativa Indica Group BGIOSGA011314 R-OSI-5608140 BGIOSGA011314 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA011320 R-OSI-9640701 BGIOSGA011320 [nucleoplasm] R-OSI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640882 Assembly of pre-replication complex none Oryza sativa Indica Group BGIOSGA011320 R-OSI-9640701 BGIOSGA011320 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA011329 R-OSI-9826637 BGIOSGA011329 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA011332 R-OSI-6786958 BGIOSGA011332 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA011332 R-OSI-6787234 BGIOSGA011332 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA011381 R-OSI-5632205 BGIOSGA011381 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA011436 R-OSI-1124065 BGIOSGA011436 [cytosol] R-OSI-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Oryza sativa Indica Group BGIOSGA011439 R-OSI-9031169 BGIOSGA011439 [endoplasmic reticulum lumen] R-OSI-9031225 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9031225 Response to phosphate deficiency none Oryza sativa Indica Group BGIOSGA011439 R-OSI-9031255 BGIOSGA011439 [plasma membrane] R-OSI-9031225 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9031225 Response to phosphate deficiency none Oryza sativa Indica Group BGIOSGA011440 R-OSI-9618181 BGIOSGA011440 [plasma membrane] R-OSI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9618218 Arsenic uptake and detoxification none Oryza sativa Indica Group BGIOSGA011492 R-OSI-1130136 BGIOSGA011492 [mitochondrial matrix] R-OSI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119533 TCA cycle (plant) none Oryza sativa Indica Group BGIOSGA011492 R-OSI-1130136 BGIOSGA011492 [mitochondrial matrix] R-OSI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119540 Leucine biosynthesis none Oryza sativa Indica Group BGIOSGA011510 R-OSI-1128641 BGIOSGA011510 [cytosol] R-OSI-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119331 Cysteine biosynthesis I none Oryza sativa Indica Group BGIOSGA011533 R-OSI-9675876 BGIOSGA011533 [nucleoplasm] R-OSI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675782 Maturation none Oryza sativa Indica Group BGIOSGA011533 R-OSI-9675876 BGIOSGA011533 [nucleoplasm] R-OSI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675815 Leading strand synthesis none Oryza sativa Indica Group BGIOSGA011533 R-OSI-9675876 BGIOSGA011533 [nucleoplasm] R-OSI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675885 Lagging strand synthesis none Oryza sativa Indica Group BGIOSGA011546 R-OSI-1126238 BGIOSGA011546 [chloroplast] R-OSI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119494 Tryptophan biosynthesis none Oryza sativa Indica Group BGIOSGA011568 R-OSI-1125610 BGIOSGA011568 [cytosol] R-OSI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119276 Choline biosynthesis III none Oryza sativa Indica Group BGIOSGA011572 R-OSI-1129478 BGIOSGA011572 [cytosol] R-OSI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119273 Lysine biosynthesis I none Oryza sativa Indica Group BGIOSGA011572 R-OSI-1129478 BGIOSGA011572 [cytosol] R-OSI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119283 Lysine biosynthesis II none Oryza sativa Indica Group BGIOSGA011572 R-OSI-5606483 BGIOSGA011572 [plastid stroma] R-OSI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119419 Lysine biosynthesis VI none Oryza sativa Indica Group BGIOSGA011586 R-OSI-1127346 BGIOSGA011586 [cytosol] R-OSI-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119316 Phenylpropanoid biosynthesis none Oryza sativa Indica Group BGIOSGA011593 R-OSI-1125194 BGIOSGA011593 [cytosol] R-OSI-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119484 Folate polyglutamylation II none Oryza sativa Indica Group BGIOSGA011593 R-OSI-1125194 BGIOSGA011593 [cytosol] R-OSI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119523 Tetrahydrofolate biosynthesis II none Oryza sativa Indica Group BGIOSGA011593 R-OSI-1125194 BGIOSGA011593 [cytosol] R-OSI-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119617 Folate polyglutamylation I none Oryza sativa Indica Group BGIOSGA011605 R-OSI-9618139 BGIOSGA011605 [plasma membrane] R-OSI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9618218 Arsenic uptake and detoxification none Oryza sativa Indica Group BGIOSGA011611 R-OSI-1126113 BGIOSGA011611 [cytosol] R-OSI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119460 Isoleucine biosynthesis from threonine none Oryza sativa Indica Group BGIOSGA011611 R-OSI-1126113 BGIOSGA011611 [cytosol] R-OSI-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119496 Pantothenate biosynthesis I none Oryza sativa Indica Group BGIOSGA011611 R-OSI-1126113 BGIOSGA011611 [cytosol] R-OSI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119540 Leucine biosynthesis none Oryza sativa Indica Group BGIOSGA011611 R-OSI-1126113 BGIOSGA011611 [cytosol] R-OSI-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119544 Pantothenate biosynthesis II none Oryza sativa Indica Group BGIOSGA011634 R-OSI-1124006 BGIOSGA011634 [cytosol] R-OSI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119273 Lysine biosynthesis I none Oryza sativa Indica Group BGIOSGA011634 R-OSI-1124006 BGIOSGA011634 [cytosol] R-OSI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119283 Lysine biosynthesis II none Oryza sativa Indica Group BGIOSGA011634 R-OSI-1124006 BGIOSGA011634 [cytosol] R-OSI-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119295 Homoserine biosynthesis none Oryza sativa Indica Group BGIOSGA011634 R-OSI-5606476 BGIOSGA011634 [plastid stroma] R-OSI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119419 Lysine biosynthesis VI none Oryza sativa Indica Group BGIOSGA011640 R-OSI-8868888 BGIOSGA011640 [endoplasmic reticulum membrane] R-OSI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8868949 Intracellular auxin transport none Oryza sativa Indica Group BGIOSGA011652 R-OSI-1127338 BGIOSGA011652 [mitochondrial inner membrane] R-OSI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119402 Phospholipid biosynthesis I none Oryza sativa Indica Group BGIOSGA011710 R-OSI-1126671 BGIOSGA011710 [cytosol] R-OSI-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119534 Pyridoxal 5'-phosphate salvage pathway none Oryza sativa Indica Group BGIOSGA011710 R-OSI-1126671 BGIOSGA011710 [cytosol] R-OSI-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119594 Pyridoxal 5'-phosphate biosynthesis none Oryza sativa Indica Group BGIOSGA011720 R-OSI-1125834 BGIOSGA011720 [cytosol] R-OSI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119379 Flavin biosynthesis none Oryza sativa Indica Group BGIOSGA011727 R-OSI-1123636 BGIOSGA011727 [cytosol] R-OSI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119273 Lysine biosynthesis I none Oryza sativa Indica Group BGIOSGA011727 R-OSI-1123636 BGIOSGA011727 [cytosol] R-OSI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119283 Lysine biosynthesis II none Oryza sativa Indica Group BGIOSGA011727 R-OSI-5606471 BGIOSGA011727 [plastid stroma] R-OSI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119419 Lysine biosynthesis VI none Oryza sativa Indica Group BGIOSGA011729 R-OSI-1128328 BGIOSGA011729 [cytosol] R-OSI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119615 Mevalonate pathway none Oryza sativa Indica Group BGIOSGA011768 R-OSI-1126728 BGIOSGA011768 [plastid stroma] R-OSI-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119424 Plastid glycolysis none Oryza sativa Indica Group BGIOSGA011770 R-OSI-6787009 BGIOSGA011770 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA011781 R-OSI-5632232 phospho-BGIOSGA011781 [plasma membrane] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA011785 R-OSI-9611526 CEBiP [plasma membrane] R-OSI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Oryza sativa Indica Group BGIOSGA011798 R-OSI-9630340 BGIOSGA011798 [nucleoplasm] R-OSI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640760 G1 phase none Oryza sativa Indica Group BGIOSGA011803 R-OSI-1127899 BGIOSGA011803 [cytosol] R-OSI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119370 Sterol biosynthesis none Oryza sativa Indica Group BGIOSGA011811 R-OSI-9640687 BGIOSGA011811 [nucleoplasm] R-OSI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640760 G1 phase none Oryza sativa Indica Group BGIOSGA011848 R-OSI-5655057 BGIOSGA011848 [Golgi lumen] R-OSI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5655101 Xyloglucan biosynthesis none Oryza sativa Indica Group BGIOSGA011868 R-OSI-6786994 BGIOSGA011868 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA011891 R-OSI-9916296 OsEXPA20 [extracellular region] R-OSI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9916190 Root angle formation: elongation and curvature response none Oryza sativa Indica Group BGIOSGA011916 R-OSI-9924379 HSFA2D [nucleoplasm] R-OSI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924451 Shoot (tiller) formation and regulation of tiller angle none Oryza sativa Indica Group BGIOSGA011925 R-OSI-1127299 BGIOSGA011925 [cytosol] R-OSI-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119298 Glutathione redox reactions II none Oryza sativa Indica Group BGIOSGA011925 R-OSI-1127299 BGIOSGA011925 [cytosol] R-OSI-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119437 Glutathione redox reactions I none Oryza sativa Indica Group BGIOSGA011938 R-OSI-8986767 BGIOSGA011938 [plastid] R-OSI-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8986768 Anther and pollen development none Oryza sativa Indica Group BGIOSGA011944 R-OSI-1122934 BGIOSGA011944 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA011980 R-OSI-1123433 BGIOSGA011980 [cytosol] R-OSI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119332 Jasmonic acid biosynthesis none Oryza sativa Indica Group BGIOSGA011980 R-OSI-1123433 BGIOSGA011980 [cytosol] R-OSI-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119618 13-LOX and 13-HPL pathway none Oryza sativa Indica Group BGIOSGA011983 R-OSI-6787180 BGIOSGA011983 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA011983 R-OSI-6787152 BGIOSGA011983 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA011996 R-OSI-5654911 BGIOSGA011996 [Golgi lumen] R-OSI-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5654909 Xylan biosynthesis none Oryza sativa Indica Group BGIOSGA011998 R-OSI-1124249 BGIOSGA011998 [cytosol] R-OSI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119428 GDP-D-rhamnose biosynthesis none Oryza sativa Indica Group BGIOSGA011998 R-OSI-1124249 BGIOSGA011998 [cytosol] R-OSI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Oryza sativa Indica Group BGIOSGA012000 R-OSI-1127723 BGIOSGA012000 [cytosol] R-OSI-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119331 Cysteine biosynthesis I none Oryza sativa Indica Group BGIOSGA012004 R-OSI-4827040 BGIOSGA012004 [plastid stroma] R-OSI-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-4827054 Tetrapyrrole biosynthesis I none Oryza sativa Indica Group BGIOSGA012015 R-OSI-9826680 BGIOSGA012015 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA012042 R-OSI-5606521 BGIOSGA012042 [plastid stroma] R-OSI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119419 Lysine biosynthesis VI none Oryza sativa Indica Group BGIOSGA012067 R-OSI-5654859 BGIOSGA012067 [nucleoplasm] R-OSI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5654828 Strigolactone signaling none Oryza sativa Indica Group BGIOSGA012067 R-OSI-5654859 BGIOSGA012067 [nucleoplasm] R-OSI-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Oryza sativa Indica Group BGIOSGA012113 R-OSI-9645944 BGIOSGA012113 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA012137 R-OSI-1129111 BGIOSGA012137 [cytosol] R-OSI-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119349 S-methylmethionine cycle none Oryza sativa Indica Group BGIOSGA012137 R-OSI-1129111 BGIOSGA012137 [cytosol] R-OSI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119400 Methionine biosynthesis II none Oryza sativa Indica Group BGIOSGA012174 R-OSI-9639049 BGIOSGA012174 [cytosol] R-OSI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119434 Phytic acid biosynthesis (lipid-independent) none Oryza sativa Indica Group BGIOSGA012177 R-OSI-1122974 BGIOSGA012177 [mitochondrial matrix] R-OSI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119479 Valine degradation none Oryza sativa Indica Group BGIOSGA012193 R-OSI-1125051 BGIOSGA012193 [cytosol] R-OSI-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119458 Glutamate degradation none Oryza sativa Indica Group BGIOSGA012223 R-OSI-1125870 BGIOSGA012223 [cytosol] R-OSI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119273 Lysine biosynthesis I none Oryza sativa Indica Group BGIOSGA012223 R-OSI-1125870 BGIOSGA012223 [cytosol] R-OSI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119283 Lysine biosynthesis II none Oryza sativa Indica Group BGIOSGA012223 R-OSI-5606480 BGIOSGA012223 [plastid stroma] R-OSI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119419 Lysine biosynthesis VI none Oryza sativa Indica Group BGIOSGA012272 R-OSI-9626449 BGIOSGA012272 [cytosol] R-OSI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9626305 Regulatory network of nutrient accumulation none Oryza sativa Indica Group BGIOSGA012284 R-OSI-6787198 BGIOSGA012284 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA012324 R-OSI-6787012 BGIOSGA012324 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA012337 R-OSI-1126799 BGIOSGA012337 [cytosol] R-OSI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119428 GDP-D-rhamnose biosynthesis none Oryza sativa Indica Group BGIOSGA012337 R-OSI-1126799 BGIOSGA012337 [cytosol] R-OSI-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119563 UDP-D-xylose biosynthesis none Oryza sativa Indica Group BGIOSGA012337 R-OSI-1126799 BGIOSGA012337 [cytosol] R-OSI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Oryza sativa Indica Group BGIOSGA012338 R-OSI-1125259 BGIOSGA012338 [cytosol] R-OSI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119428 GDP-D-rhamnose biosynthesis none Oryza sativa Indica Group BGIOSGA012338 R-OSI-1125259 BGIOSGA012338 [cytosol] R-OSI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Oryza sativa Indica Group BGIOSGA012372 R-OSI-1127140-2 BGIOSGA012372 [cytosol] R-OSI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119403 Removal of superoxide radicals none Oryza sativa Indica Group BGIOSGA012374 R-OSI-1127140 BGIOSGA012374 [cytosol] R-OSI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119403 Removal of superoxide radicals none Oryza sativa Indica Group BGIOSGA012375 R-OSI-1126138 BGIOSGA012375 [cytosol] R-OSI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119389 Phenylalanine biosynthesis I none Oryza sativa Indica Group BGIOSGA012434 R-OSI-5606478 BGIOSGA012434 [plastid stroma] R-OSI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119419 Lysine biosynthesis VI none Oryza sativa Indica Group BGIOSGA012455 R-OSI-9645891 BGIOSGA012455 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA012457 R-OSI-9675331 BGIOSGA012457 [plastid] R-OSI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030654 Primary root development none Oryza sativa Indica Group BGIOSGA012461 R-OSI-5655092 BGIOSGA012461 [Golgi lumen] R-OSI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5655101 Xyloglucan biosynthesis none Oryza sativa Indica Group BGIOSGA012466 R-OSI-9025712 BGIOSGA012466 [cytosol] R-OSI-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9025754 Mugineic acid biosynthesis none Oryza sativa Indica Group BGIOSGA012476 R-OSI-8933856 BGIOSGA012476 [nucleoplasm] R-OSI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8933811 Circadian rhythm none Oryza sativa Indica Group BGIOSGA012476 R-OSI-8933748 BGIOSGA012476 [cytosol] R-OSI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8933811 Circadian rhythm none Oryza sativa Indica Group BGIOSGA012476 R-OSI-8933856 BGIOSGA012476 [nucleoplasm] R-OSI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934036 Long day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA012476 R-OSI-8933856 BGIOSGA012476 [nucleoplasm] R-OSI-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924494 Gravity sensing and statolith sedimentation none Oryza sativa Indica Group BGIOSGA012476 R-OSI-8933856 BGIOSGA012476 [nucleoplasm] R-OSI-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9928995 Drought escape (DE) via ABA-dependent pathway none Oryza sativa Indica Group BGIOSGA012525 R-OSI-9826700 BGIOSGA012525 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA012535 R-OSI-6787084 BGIOSGA012535 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA012571 R-OSI-6787213 BGIOSGA012571 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA012597 R-OSI-9826608 BGIOSGA012597 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA012617 R-OSI-1123591 BGIOSGA012617 [cytosol] R-OSI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119403 Removal of superoxide radicals none Oryza sativa Indica Group BGIOSGA012617 R-OSI-1123591 BGIOSGA012617 [cytosol] R-OSI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Oryza sativa Indica Group BGIOSGA012652 R-OSI-1128534 BGIOSGA012652 [cytosol] R-OSI-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119437 Glutathione redox reactions I none Oryza sativa Indica Group BGIOSGA012657 R-OSI-1125820 BGIOSGA012657 [cytosol] R-OSI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119473 Cytokinins-O-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA012784 R-OSI-1129934 BGIOSGA012784 [plastid stroma] R-OSI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119430 Chorismate biosynthesis none Oryza sativa Indica Group BGIOSGA012790 R-OSI-9025230 BGIOSGA012790 [peroxisomal matrix] R-OSI-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119407 Ureide biosynthesis none Oryza sativa Indica Group BGIOSGA012793 R-OSI-1125532 BGIOSGA012793 [cytosol] R-OSI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119276 Choline biosynthesis III none Oryza sativa Indica Group BGIOSGA012883 R-OSI-6787262 BGIOSGA012883 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA012897 R-OSI-1125883 BGIOSGA012897 [mitochondrion] R-OSI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119506 tyrosine degradation I none Oryza sativa Indica Group BGIOSGA012914 R-OSI-9681886 BGIOSGA012914 [cytosol] R-OSI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119574 UDP-L-arabinose biosynthesis and transport none Oryza sativa Indica Group BGIOSGA012924 R-OSI-1129600 BGIOSGA012924 [cytosol] R-OSI-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119407 Ureide biosynthesis none Oryza sativa Indica Group BGIOSGA013029 R-OSI-9639016 BGIOSGA013029 [cytosol] R-OSI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119410 Ascorbate biosynthesis none Oryza sativa Indica Group BGIOSGA013029 R-OSI-9639016 BGIOSGA013029 [cytosol] R-OSI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119434 Phytic acid biosynthesis (lipid-independent) none Oryza sativa Indica Group BGIOSGA013144 R-OSI-9826655 Os03g0622100 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA013214 R-OSI-5221144 BGIOSGA013214 [plastid] R-OSI-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119374 Abscisic acid biosynthesis none Oryza sativa Indica Group BGIOSGA013291 R-OSI-1130348 BGIOSGA013291 [cytosol] R-OSI-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Oryza sativa Indica Group BGIOSGA013417 R-OSI-5654829 BGIOSGA013417 [nucleoplasm] R-OSI-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Oryza sativa Indica Group BGIOSGA013420 R-OSI-5679455 BGIOSGA013420 [nucleoplasm] R-OSI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5679411 Gibberellin signaling none Oryza sativa Indica Group BGIOSGA013420 R-OSI-6787020 BGIOSGA013420 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA013421 R-OSI-1126513 BGIOSGA013421 [cytosol] R-OSI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119332 Jasmonic acid biosynthesis none Oryza sativa Indica Group BGIOSGA013429 R-OSI-5632316 BGIOSGA013429 [cytosol] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA013440 R-OSI-1128632 BGIOSGA013440 [cytosol] R-OSI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119465 Sucrose biosynthesis none Oryza sativa Indica Group BGIOSGA013440 R-OSI-1128632 BGIOSGA013440 [cytosol] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA013443 R-OSI-1127031 BGIOSGA013443 [cytosol] R-OSI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119460 Isoleucine biosynthesis from threonine none Oryza sativa Indica Group BGIOSGA013468 R-OSI-1123077-2 BGIOSGA013468 [cytosol] R-OSI-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119458 Glutamate degradation none Oryza sativa Indica Group BGIOSGA013470 R-OSI-1123077 BGIOSGA013470 [cytosol] R-OSI-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119458 Glutamate degradation none Oryza sativa Indica Group BGIOSGA013491 R-OSI-9927759 BGIOSGA013491 [nucleoplasm] R-OSI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934036 Long day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA013495 R-OSI-9639012 BGIOSGA013495 [cytosol] R-OSI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119434 Phytic acid biosynthesis (lipid-independent) none Oryza sativa Indica Group BGIOSGA013499 R-OSI-9035593 BGIOSGA013499 [cytosol] R-OSI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9035605 Regulation of seed size none Oryza sativa Indica Group BGIOSGA013499 R-OSI-9035634 BGIOSGA013499 [nucleoplasm] R-OSI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9035605 Regulation of seed size none Oryza sativa Indica Group BGIOSGA013499 R-OSI-9035593 BGIOSGA013499 [cytosol] R-OSI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9608575 Reproductive meristem phase change none Oryza sativa Indica Group BGIOSGA013499 R-OSI-9035634 BGIOSGA013499 [nucleoplasm] R-OSI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9608575 Reproductive meristem phase change none Oryza sativa Indica Group BGIOSGA013521 R-OSI-9640783 BGIOSGA013521 [nucleoplasm] R-OSI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640760 G1 phase none Oryza sativa Indica Group BGIOSGA013524 R-OSI-8987575 BGIOSGA013524 [mitochondrial matrix] R-OSI-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119311 Glycine biosynthesis I none Oryza sativa Indica Group BGIOSGA013583 R-OSI-9639171 BGIOSGA013583 [plant-type vacuole membrane] R-OSI-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9639136 Response to Aluminum stress none Oryza sativa Indica Group BGIOSGA013592 R-OSI-1123270 BGIOSGA013592 [cytosol] R-OSI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119452 Galactose degradation II none Oryza sativa Indica Group BGIOSGA013592 R-OSI-1123270 BGIOSGA013592 [cytosol] R-OSI-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119563 UDP-D-xylose biosynthesis none Oryza sativa Indica Group BGIOSGA013592 R-OSI-1123270 BGIOSGA013592 [cytosol] R-OSI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119574 UDP-L-arabinose biosynthesis and transport none Oryza sativa Indica Group BGIOSGA013599 R-OSI-9640694 BGIOSGA013599 [nucleoplasm] R-OSI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640882 Assembly of pre-replication complex none Oryza sativa Indica Group BGIOSGA013599 R-OSI-9640694 BGIOSGA013599 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA013607 R-OSI-1125504 BGIOSGA013607 [cytosol] R-OSI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119273 Lysine biosynthesis I none Oryza sativa Indica Group BGIOSGA013607 R-OSI-1125504 BGIOSGA013607 [cytosol] R-OSI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119283 Lysine biosynthesis II none Oryza sativa Indica Group BGIOSGA013607 R-OSI-1125504 BGIOSGA013607 [cytosol] R-OSI-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119295 Homoserine biosynthesis none Oryza sativa Indica Group BGIOSGA013607 R-OSI-5606489 BGIOSGA013607 [plastid stroma] R-OSI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119419 Lysine biosynthesis VI none Oryza sativa Indica Group BGIOSGA013616 R-OSI-8933816 BGIOSGA013616 [nucleoplasm] R-OSI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8933811 Circadian rhythm none Oryza sativa Indica Group BGIOSGA013621 R-OSI-4415109 phospho-BGIOSGA013621 [cytosol] R-OSI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-3899351 Abscisic acid (ABA) mediated signaling none Oryza sativa Indica Group BGIOSGA013652 R-OSI-1124742 BGIOSGA013652 [cytosol] R-OSI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119410 Ascorbate biosynthesis none Oryza sativa Indica Group BGIOSGA013652 R-OSI-1124742 BGIOSGA013652 [cytosol] R-OSI-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119570 Cytosolic glycolysis none Oryza sativa Indica Group BGIOSGA013663 R-OSI-1123404 BGIOSGA013663 [peroxisomal matrix] R-OSI-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119407 Ureide biosynthesis none Oryza sativa Indica Group BGIOSGA013665 R-OSI-9025548 BGIOSGA013665 [endoplasmic reticulum membrane] R-OSI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119325 Sphingolipid metabolism none Oryza sativa Indica Group BGIOSGA013672 R-OSI-5632110 BGIOSGA013672 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA013672 R-OSI-5632110 BGIOSGA013672 [nucleoplasm] R-OSI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5679411 Gibberellin signaling none Oryza sativa Indica Group BGIOSGA013683 R-OSI-8987551 BGIOSGA013683 [peroxisomal matrix] R-OSI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119312 Photorespiration none Oryza sativa Indica Group BGIOSGA013683 R-OSI-1124984 BGIOSGA013683 [cytosol] R-OSI-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119596 Glutamate biosynthesis I none Oryza sativa Indica Group BGIOSGA013686 R-OSI-8987551-2 BGIOSGA013686 [peroxisomal matrix] R-OSI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119312 Photorespiration none Oryza sativa Indica Group BGIOSGA013686 R-OSI-1124984-2 BGIOSGA013686 [cytosol] R-OSI-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119596 Glutamate biosynthesis I none Oryza sativa Indica Group BGIOSGA013713 R-OSI-9927822 BGIOSGA013713 [nucleoplasm] R-OSI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934036 Long day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA013765 R-OSI-1128553 BGIOSGA013765 [cytosol] R-OSI-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Oryza sativa Indica Group BGIOSGA013765 R-OSI-1128553 BGIOSGA013765 [cytosol] R-OSI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119370 Sterol biosynthesis none Oryza sativa Indica Group BGIOSGA013765 R-OSI-1128553 BGIOSGA013765 [cytosol] R-OSI-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119439 Cholesterol biosynthesis III (via desmosterol) none Oryza sativa Indica Group BGIOSGA013765 R-OSI-1128553 BGIOSGA013765 [cytosol] R-OSI-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119559 Cholesterol biosynthesis I none Oryza sativa Indica Group BGIOSGA013766 R-OSI-5632241 BGIOSGA013766 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA013797 R-OSI-1250417 BGIOSGA013797 [cytosol] R-OSI-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119374 Abscisic acid biosynthesis none Oryza sativa Indica Group BGIOSGA013826 R-OSI-9608682 BGIOSGA013826 [nucleoplasm] R-OSI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934036 Long day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA013826 R-OSI-9608682 BGIOSGA013826 [nucleoplasm] R-OSI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9608575 Reproductive meristem phase change none Oryza sativa Indica Group BGIOSGA013826 R-OSI-9608606 BGIOSGA013826 [cytosol] R-OSI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9608575 Reproductive meristem phase change none Oryza sativa Indica Group BGIOSGA013831 R-OSI-9930192 BGIOSGA013831 [nucleoplasm] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA013849 R-OSI-1123751 BGIOSGA013849 [cytosol] R-OSI-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119292 Cytokinins 7-N-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA013849 R-OSI-1123751 BGIOSGA013849 [cytosol] R-OSI-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119375 Cytokinins 9-N-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA013849 R-OSI-1123751 BGIOSGA013849 [cytosol] R-OSI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119473 Cytokinins-O-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA013852 R-OSI-8986695 BGIOSGA013852 [endoplasmic reticulum membrane] R-OSI-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8986768 Anther and pollen development none Oryza sativa Indica Group BGIOSGA013857 R-OSI-1129390 BGIOSGA013857 [mitochondrion] R-OSI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119506 tyrosine degradation I none Oryza sativa Indica Group BGIOSGA013878 R-OSI-1129507 BGIOSGA013878 [cytosol] R-OSI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119452 Galactose degradation II none Oryza sativa Indica Group BGIOSGA013889 R-OSI-9626474 BGIOSGA013889 [trans-Golgi network membrane] R-OSI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9626305 Regulatory network of nutrient accumulation none Oryza sativa Indica Group BGIOSGA013895 R-OSI-2685731 BGIOSGA013895 [cytosol] R-OSI-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119580 IAA biosynthesis II none Oryza sativa Indica Group BGIOSGA013925 R-OSI-5632129 BGIOSGA013925 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA013949 R-OSI-1126714 BGIOSGA013949 [cytosol] R-OSI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119273 Lysine biosynthesis I none Oryza sativa Indica Group BGIOSGA013949 R-OSI-1126714 BGIOSGA013949 [cytosol] R-OSI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119283 Lysine biosynthesis II none Oryza sativa Indica Group BGIOSGA013949 R-OSI-1126714 BGIOSGA013949 [cytosol] R-OSI-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119295 Homoserine biosynthesis none Oryza sativa Indica Group BGIOSGA013949 R-OSI-5606484 BGIOSGA013949 [plastid stroma] R-OSI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119419 Lysine biosynthesis VI none Oryza sativa Indica Group BGIOSGA013959 R-OSI-1126091 BGIOSGA013959 [cytosol] R-OSI-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119394 Pantothenate and coenzyme A biosynthesis III none Oryza sativa Indica Group BGIOSGA013959 R-OSI-1126091 BGIOSGA013959 [cytosol] R-OSI-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119496 Pantothenate biosynthesis I none Oryza sativa Indica Group BGIOSGA013959 R-OSI-1126091 BGIOSGA013959 [cytosol] R-OSI-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119544 Pantothenate biosynthesis II none Oryza sativa Indica Group BGIOSGA013959 R-OSI-1126091 BGIOSGA013959 [cytosol] R-OSI-1119568 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119568 Pantothenate biosynthesis III none Oryza sativa Indica Group BGIOSGA014036 R-OSI-5608213 BGIOSGA014036 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA014119 R-OSI-5608169 BGIOSGA014119 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA014129 R-OSI-1127324 BGIOSGA014129 [cytosol] R-OSI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119624 Methionine salvage pathway none Oryza sativa Indica Group BGIOSGA014130 R-OSI-1123260 BGIOSGA014130 [cytosol] R-OSI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119624 Methionine salvage pathway none Oryza sativa Indica Group BGIOSGA014158 R-OSI-5608137 BGIOSGA014158 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA014166 R-OSI-2672431 BGIOSGA014166 [cytosol] R-OSI-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119322 Leucodelphinidin biosynthesis none Oryza sativa Indica Group BGIOSGA014166 R-OSI-2672431 BGIOSGA014166 [cytosol] R-OSI-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Oryza sativa Indica Group BGIOSGA014166 R-OSI-1124195 BGIOSGA014166 [cytosol] R-OSI-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119531 Flavonoid biosynthesis none Oryza sativa Indica Group BGIOSGA014179 R-OSI-5632226 BGIOSGA014179 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA014182 R-OSI-1129629 BGIOSGA014182 [plastid stroma] R-OSI-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119293 Glutamine biosynthesis I none Oryza sativa Indica Group BGIOSGA014182 R-OSI-1129629 BGIOSGA014182 [plastid stroma] R-OSI-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119443 Ammonia assimilation cycle none Oryza sativa Indica Group BGIOSGA014224 R-OSI-1126860 BGIOSGA014224 [cytosol] R-OSI-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119321 Glycerol degradation I none Oryza sativa Indica Group BGIOSGA014246 R-OSI-5632242 BGIOSGA014246 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA014251 R-OSI-1130308 BGIOSGA014251 [plastid stroma] R-OSI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119430 Chorismate biosynthesis none Oryza sativa Indica Group BGIOSGA014259 R-OSI-1128463 BGIOSGA014259 [cytosol] R-OSI-1119550 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119550 Gentiodelphin biosynthesis none Oryza sativa Indica Group BGIOSGA014316 R-OSI-1127243 BGIOSGA014316 [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA014328 R-OSI-9618186 BGIOSGA014328 [plant-type vacuole membrane] R-OSI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9618218 Arsenic uptake and detoxification none Oryza sativa Indica Group BGIOSGA014511 R-OSI-1129892 BGIOSGA014511 [cytosol] R-OSI-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119334 Ethylene biosynthesis from methionine none Oryza sativa Indica Group BGIOSGA014511 R-OSI-1129892 BGIOSGA014511 [cytosol] R-OSI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119624 Methionine salvage pathway none Oryza sativa Indica Group BGIOSGA014516 R-OSI-1126602 BGIOSGA014516 [cytosol] R-OSI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119273 Lysine biosynthesis I none Oryza sativa Indica Group BGIOSGA014516 R-OSI-1126602 BGIOSGA014516 [cytosol] R-OSI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119283 Lysine biosynthesis II none Oryza sativa Indica Group BGIOSGA014516 R-OSI-5606482 BGIOSGA014516 [plastid stroma] R-OSI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119419 Lysine biosynthesis VI none Oryza sativa Indica Group BGIOSGA014560 R-OSI-1129277 BGIOSGA014560 [cytosol] R-OSI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119460 Isoleucine biosynthesis from threonine none Oryza sativa Indica Group BGIOSGA014560 R-OSI-1129277 BGIOSGA014560 [cytosol] R-OSI-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119496 Pantothenate biosynthesis I none Oryza sativa Indica Group BGIOSGA014560 R-OSI-1129277 BGIOSGA014560 [cytosol] R-OSI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119540 Leucine biosynthesis none Oryza sativa Indica Group BGIOSGA014560 R-OSI-1129277 BGIOSGA014560 [cytosol] R-OSI-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119544 Pantothenate biosynthesis II none Oryza sativa Indica Group BGIOSGA014599 R-OSI-1128812 BGIOSGA014599 [cytosol] R-OSI-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119393 Asparagine degradation I none Oryza sativa Indica Group BGIOSGA014617 R-OSI-6786973 BGIOSGA014617 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA014628 R-OSI-9025791 BGIOSGA014628 [plasma membrane] R-OSI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9025727 Iron uptake and transport in root vascular system none Oryza sativa Indica Group BGIOSGA014634 R-OSI-9658643 BGIOSGA014634 [cytosol] R-OSI-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119567 Beta-alanine biosynthesis I none Oryza sativa Indica Group BGIOSGA014703 R-OSI-1127614 BGIOSGA014703 [cytosol] R-OSI-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119261 Salicylate biosynthesis none Oryza sativa Indica Group BGIOSGA014703 R-OSI-1127614 BGIOSGA014703 [cytosol] R-OSI-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119418 Suberin biosynthesis none Oryza sativa Indica Group BGIOSGA014703 R-OSI-1127614 BGIOSGA014703 [cytosol] R-OSI-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119582 Phenylpropanoid biosynthesis, initial reactions none Oryza sativa Indica Group BGIOSGA014705 R-OSI-1130235 BGIOSGA014705 [cytosol] R-OSI-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119261 Salicylate biosynthesis none Oryza sativa Indica Group BGIOSGA014705 R-OSI-1130235 BGIOSGA014705 [cytosol] R-OSI-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119418 Suberin biosynthesis none Oryza sativa Indica Group BGIOSGA014705 R-OSI-1130235 BGIOSGA014705 [cytosol] R-OSI-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119582 Phenylpropanoid biosynthesis, initial reactions none Oryza sativa Indica Group BGIOSGA014711 R-OSI-1128298 BGIOSGA014711 [cytosol] R-OSI-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119271 Threonine degradation none Oryza sativa Indica Group BGIOSGA014711 R-OSI-1128298 BGIOSGA014711 [cytosol] R-OSI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119610 Biotin biosynthesis II none Oryza sativa Indica Group BGIOSGA014797 R-OSI-1123563 BGIOSGA014797 [cytosol] R-OSI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119379 Flavin biosynthesis none Oryza sativa Indica Group BGIOSGA014799 R-OSI-9675272 BGIOSGA014799 [plasma membrane] R-OSI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030654 Primary root development none Oryza sativa Indica Group BGIOSGA014873 R-OSI-1130141 BGIOSGA014873 [mitochondrial matrix] R-OSI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119533 TCA cycle (plant) none Oryza sativa Indica Group BGIOSGA014873 R-OSI-1130141 BGIOSGA014873 [mitochondrial matrix] R-OSI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119540 Leucine biosynthesis none Oryza sativa Indica Group BGIOSGA014941 R-OSI-1123551 BGIOSGA014941 [chloroplast] R-OSI-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119579 Glycine betaine biosynthesis III none Oryza sativa Indica Group BGIOSGA014945 R-OSI-1128637 BGIOSGA014945 [chloroplast] R-OSI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119494 Tryptophan biosynthesis none Oryza sativa Indica Group BGIOSGA015185 R-OSI-5608203 BGIOSGA015185 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA015185 R-OSI-5608203 BGIOSGA015185 [nucleoplasm] R-OSI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9608575 Reproductive meristem phase change none Oryza sativa Indica Group BGIOSGA015185 R-OSI-9658968 BGIOSGA015185 [cytosol] R-OSI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9608575 Reproductive meristem phase change none Oryza sativa Indica Group BGIOSGA015187 R-OSI-1128606 BGIOSGA015187 [mitochondrial matrix] R-OSI-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119365 Lysine degradation II none Oryza sativa Indica Group BGIOSGA015187 R-OSI-1173244 BGIOSGA015187 [mitochondrial matrix] R-OSI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119533 TCA cycle (plant) none Oryza sativa Indica Group BGIOSGA015219 R-OSI-1128549 BGIOSGA015219 [cytosol] R-OSI-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119449 Carotenoid biosynthesis none Oryza sativa Indica Group BGIOSGA015346 R-OSI-1123757-2 BGIOSGA015346 [cytosol] R-OSI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119473 Cytokinins-O-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA015474 R-OSI-6786920 BGIOSGA015474 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA015482 R-OSI-9618167 BGIOSGA015482 [cytosol] R-OSI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9618218 Arsenic uptake and detoxification none Oryza sativa Indica Group BGIOSGA015483 R-OSI-1128815 BGIOSGA015483 [cytosol] R-OSI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119452 Galactose degradation II none Oryza sativa Indica Group BGIOSGA015483 R-OSI-1128815 BGIOSGA015483 [cytosol] R-OSI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119465 Sucrose biosynthesis none Oryza sativa Indica Group BGIOSGA015502 R-OSI-1128337 BGIOSGA015502 [plastid stroma] R-OSI-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119308 Momilactone biosynthesis none Oryza sativa Indica Group BGIOSGA015504 R-OSI-1129559 BGIOSGA015504 [plastid stroma] R-OSI-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119308 Momilactone biosynthesis none Oryza sativa Indica Group BGIOSGA015518 R-OSI-9618153 BGIOSGA015518 [plasma membrane] R-OSI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9618218 Arsenic uptake and detoxification none Oryza sativa Indica Group BGIOSGA015604 R-OSI-6787066 BGIOSGA015604 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA015661 R-OSI-9658676 BGIOSGA015661 [cytosol] R-OSI-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119567 Beta-alanine biosynthesis I none Oryza sativa Indica Group BGIOSGA015708 R-OSI-9640718 BGIOSGA015708 [nucleoplasm] R-OSI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640887 G1/S transition none Oryza sativa Indica Group BGIOSGA015713 R-OSI-1126344 BGIOSGA015713 [plastid stroma] R-OSI-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119529 Sulfate activation for sulfonation none Oryza sativa Indica Group BGIOSGA015743 R-OSI-9609569 BGIOSGA015743 [cytosol] R-OSI-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9609573 Tricin biosynthesis none Oryza sativa Indica Group BGIOSGA015751 R-OSI-5654942 BGIOSGA015751 [Golgi lumen] R-OSI-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5654909 Xylan biosynthesis none Oryza sativa Indica Group BGIOSGA015760 R-OSI-5631969 BGIOSGA015760 [mitochondrial matrix] R-OSI-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119289 Arginine degradation none Oryza sativa Indica Group BGIOSGA015760 R-OSI-5633275 BGIOSGA015760 [cytosol] R-OSI-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119495 Citrulline biosynthesis none Oryza sativa Indica Group BGIOSGA015766 R-OSI-1122373 BGIOSGA015766 [cytosol] R-OSI-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119304 Putrescine biosynthesis II none Oryza sativa Indica Group BGIOSGA015766 R-OSI-1122373 BGIOSGA015766 [cytosol] R-OSI-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119447 Putrescine biosynthesis I none Oryza sativa Indica Group BGIOSGA015794 R-OSI-1127599 BGIOSGA015794 [cytosol] R-OSI-1119388 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119388 IAA biosynthesis VI (via indole-3-acetamide) none Oryza sativa Indica Group BGIOSGA015795 R-OSI-1126763 BGIOSGA015795 [cytosol] R-OSI-1119388 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119388 IAA biosynthesis VI (via indole-3-acetamide) none Oryza sativa Indica Group BGIOSGA015875 R-OSI-9918273 BGIOSGA015875 [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA015875 R-OSI-9626376 BGIOSGA015875 [plastid stroma] R-OSI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9626305 Regulatory network of nutrient accumulation none Oryza sativa Indica Group BGIOSGA015886 R-OSI-5225766 BGIOSGA015886 [nucleoplasm] R-OSI-5225756 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5225756 Ethylene mediated signaling none Oryza sativa Indica Group BGIOSGA015962 R-OSI-6786904 BGIOSGA015962 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA015968 R-OSI-9640782 BGIOSGA015968 [nucleoplasm] R-OSI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640882 Assembly of pre-replication complex none Oryza sativa Indica Group BGIOSGA015980 R-OSI-1123662 BGIOSGA015980 [plastid stroma] R-OSI-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119308 Momilactone biosynthesis none Oryza sativa Indica Group BGIOSGA015983 R-OSI-1124036 BGIOSGA015983 [cytosol] R-OSI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119379 Flavin biosynthesis none Oryza sativa Indica Group BGIOSGA015995 R-OSI-1130084 BGIOSGA015995 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA016013 R-OSI-1123313 BGIOSGA016013 [cytosol] R-OSI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119273 Lysine biosynthesis I none Oryza sativa Indica Group BGIOSGA016013 R-OSI-1123313 BGIOSGA016013 [cytosol] R-OSI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119283 Lysine biosynthesis II none Oryza sativa Indica Group BGIOSGA016013 R-OSI-5606494 BGIOSGA016013 [plastid stroma] R-OSI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119419 Lysine biosynthesis VI none Oryza sativa Indica Group BGIOSGA016030 R-OSI-1124977 BGIOSGA016030 [cytosol] R-OSI-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119586 Cyanate degradation none Oryza sativa Indica Group BGIOSGA016111 R-OSI-1126320 BGIOSGA016111 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA016278 R-OSI-1129085 BGIOSGA016278 [cytosol] R-OSI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119460 Isoleucine biosynthesis from threonine none Oryza sativa Indica Group BGIOSGA016278 R-OSI-1129085 BGIOSGA016278 [cytosol] R-OSI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119600 Valine biosynthesis none Oryza sativa Indica Group BGIOSGA016279 R-OSI-1127911 BGIOSGA016279 [mitochondrial matrix] R-OSI-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119365 Lysine degradation II none Oryza sativa Indica Group BGIOSGA016308 R-OSI-6787123 BGIOSGA016308 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA016308 R-OSI-6786942 BGIOSGA016308 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA016313 R-OSI-9930242 BGIOSGA016313 [nucleoplasm] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA016340 R-OSI-1122707 BGIOSGA016340 [cytosol] R-OSI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119389 Phenylalanine biosynthesis I none Oryza sativa Indica Group BGIOSGA016359 R-OSI-1124977-2 BGIOSGA016359 [cytosol] R-OSI-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119586 Cyanate degradation none Oryza sativa Indica Group BGIOSGA016467 R-OSI-1124401 BGIOSGA016467 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA016491 R-OSI-1124087 BGIOSGA016491 [cytosol] R-OSI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119332 Jasmonic acid biosynthesis none Oryza sativa Indica Group BGIOSGA016491 R-OSI-1124087 BGIOSGA016491 [cytosol] R-OSI-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119618 13-LOX and 13-HPL pathway none Oryza sativa Indica Group BGIOSGA016495 R-OSI-1127019 BGIOSGA016495 [cytosol] R-OSI-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119458 Glutamate degradation none Oryza sativa Indica Group BGIOSGA016499 R-OSI-9029354 BGIOSGA016499 [extracellular region] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA016502 R-OSI-4754219 BGIOSGA016502 [plastid stroma] R-OSI-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119449 Carotenoid biosynthesis none Oryza sativa Indica Group BGIOSGA016514 R-OSI-1128835 BGIOSGA016514 [cytosol] R-OSI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119473 Cytokinins-O-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA016539 R-OSI-1127873 BGIOSGA016539 [plastid stroma] R-OSI-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119424 Plastid glycolysis none Oryza sativa Indica Group BGIOSGA016539 R-OSI-1127873 BGIOSGA016539 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA016546 R-OSI-9766876 BGIOSGA016546 [nucleoplasm] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA016551 R-OSI-5632200 BGIOSGA016551 [cytosol] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA016558 R-OSI-5149689 BGIOSGA016558 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA016558 R-OSI-1125519 BGIOSGA016558 [cytosol] R-OSI-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119570 Cytosolic glycolysis none Oryza sativa Indica Group BGIOSGA016580 R-OSI-1125533 BGIOSGA016580 [cytosol] R-OSI-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119304 Putrescine biosynthesis II none Oryza sativa Indica Group BGIOSGA016636 R-OSI-1126726 BGIOSGA016636 [cytosol] R-OSI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119273 Lysine biosynthesis I none Oryza sativa Indica Group BGIOSGA016636 R-OSI-1126726 BGIOSGA016636 [cytosol] R-OSI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119283 Lysine biosynthesis II none Oryza sativa Indica Group BGIOSGA016698 R-OSI-1122932 BGIOSGA016698 [cytosol] R-OSI-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119317 Spermine biosynthesis none Oryza sativa Indica Group BGIOSGA016698 R-OSI-1122932 BGIOSGA016698 [cytosol] R-OSI-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119343 Spermidine biosynthesis none Oryza sativa Indica Group BGIOSGA016698 R-OSI-1122932 BGIOSGA016698 [cytosol] R-OSI-1119446 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119446 Lysine degradation I none Oryza sativa Indica Group BGIOSGA016775 R-OSI-2685732 BGIOSGA016775 [cytosol] R-OSI-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119580 IAA biosynthesis II none Oryza sativa Indica Group BGIOSGA016831 R-OSI-1122855 BGIOSGA016831 [cytosol] R-OSI-1119360 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119360 Fructan biosynthesis none Oryza sativa Indica Group BGIOSGA016885 R-OSI-5138507 BGIOSGA016885 [plastid stroma] R-OSI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119263 Arginine biosynthesis none Oryza sativa Indica Group BGIOSGA016885 R-OSI-5138507 BGIOSGA016885 [plastid stroma] R-OSI-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119539 Ornithine biosynthesis none Oryza sativa Indica Group BGIOSGA016885 R-OSI-5138507 BGIOSGA016885 [plastid stroma] R-OSI-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119622 Arginine biosynthesis II (acetyl cycle) none Oryza sativa Indica Group BGIOSGA016886 R-OSI-5367777 BGIOSGA016886 [plastid stroma] R-OSI-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5367729 Strigolactone biosynthesis none Oryza sativa Indica Group BGIOSGA016891 R-OSI-9924407 EXPB5 [basolateral plasma membrane] R-OSI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924451 Shoot (tiller) formation and regulation of tiller angle none Oryza sativa Indica Group BGIOSGA016904 R-OSI-1126615 BGIOSGA016904 [cytosol] R-OSI-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119437 Glutathione redox reactions I none Oryza sativa Indica Group BGIOSGA016934 R-OSI-5679402 BGIOSGA016934 [nucleoplasm] R-OSI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5679411 Gibberellin signaling none Oryza sativa Indica Group BGIOSGA016941 R-OSI-6787864 BGIOSGA016941 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA016942 R-OSI-9675851 BGIOSGA016942 [nucleoplasm] R-OSI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675815 Leading strand synthesis none Oryza sativa Indica Group BGIOSGA016950 R-OSI-8879071 CBF1 homolog [nucleoplasm] R-OSI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8879007 Response to cold temperature none Oryza sativa Indica Group BGIOSGA016963 R-OSI-3899389 BGIOSGA016963 [plasma membrane] R-OSI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-3899351 Abscisic acid (ABA) mediated signaling none Oryza sativa Indica Group BGIOSGA016963 R-OSI-3899371 phospho-BGIOSGA016963 [plasma membrane] R-OSI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-3899351 Abscisic acid (ABA) mediated signaling none Oryza sativa Indica Group BGIOSGA016966 R-OSI-1125093 BGIOSGA016966 [cytosol] R-OSI-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119456 Brassinosteroid biosynthesis II none Oryza sativa Indica Group BGIOSGA016994 R-OSI-5221147 BGIOSGA016994 [cytosol] R-OSI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-3899351 Abscisic acid (ABA) mediated signaling none Oryza sativa Indica Group BGIOSGA017006 R-OSI-9675878 BGIOSGA017006 [nucleoplasm] R-OSI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675782 Maturation none Oryza sativa Indica Group BGIOSGA017063 R-OSI-6787125 BGIOSGA017063 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA017085 R-OSI-6787173 BGIOSGA017085 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA017085 R-OSI-6786972 BGIOSGA017085 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA017096 R-OSI-1129421 BGIOSGA017096 [chloroplast] R-OSI-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119348 Ent-kaurene biosynthesis none Oryza sativa Indica Group BGIOSGA017097 R-OSI-1129421-2 BGIOSGA017097 [chloroplast] R-OSI-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119348 Ent-kaurene biosynthesis none Oryza sativa Indica Group BGIOSGA017098 R-OSI-4836386 BGIOSGA017098 [plastid stroma] R-OSI-1119328 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119328 Oleoresin sesquiterpene volatiles biosynthesis none Oryza sativa Indica Group BGIOSGA017098 R-OSI-1129297 BGIOSGA017098 [chloroplast] R-OSI-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119348 Ent-kaurene biosynthesis none Oryza sativa Indica Group BGIOSGA017100 R-OSI-9826677 BGIOSGA017100 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA017115 R-OSI-9026148 BGIOSGA017115 [mitochondrion] R-OSI-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119458 Glutamate degradation none Oryza sativa Indica Group BGIOSGA017134 R-OSI-1125584 BGIOSGA017134 [plastid stroma] R-OSI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119509 Histidine biosynthesis I none Oryza sativa Indica Group BGIOSGA017137 R-OSI-1129564 BGIOSGA017137 [cytosol] R-OSI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119428 GDP-D-rhamnose biosynthesis none Oryza sativa Indica Group BGIOSGA017137 R-OSI-9681913 BGIOSGA017137 [Golgi membrane] R-OSI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119574 UDP-L-arabinose biosynthesis and transport none Oryza sativa Indica Group BGIOSGA017137 R-OSI-1129564 BGIOSGA017137 [cytosol] R-OSI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Oryza sativa Indica Group BGIOSGA017141 R-OSI-8879040 BGIOSGA017141 [nucleoplasm] R-OSI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8879007 Response to cold temperature none Oryza sativa Indica Group BGIOSGA017163 R-OSI-8987539 BGIOSGA017163 [peroxisomal matrix] R-OSI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119312 Photorespiration none Oryza sativa Indica Group BGIOSGA017163 R-OSI-1127383 BGIOSGA017163 [cytosol] R-OSI-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119596 Glutamate biosynthesis I none Oryza sativa Indica Group BGIOSGA017166 R-OSI-8987488 BGIOSGA017166 [mitochondrial matrix] R-OSI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119312 Photorespiration none Oryza sativa Indica Group BGIOSGA017249 R-OSI-9920344 BGIOSGA017249 [nucleoplasm] R-OSI-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934108 Short day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA017254 R-OSI-5654750 BGIOSGA017254 [cytosol] R-OSI-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119393 Asparagine degradation I none Oryza sativa Indica Group BGIOSGA017260 R-OSI-6787173-2 BGIOSGA017260 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA017260 R-OSI-6786972-2 BGIOSGA017260 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA017292 R-OSI-9681905 BGIOSGA017292 [Golgi membrane] R-OSI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119574 UDP-L-arabinose biosynthesis and transport none Oryza sativa Indica Group BGIOSGA017330 R-OSI-8986682 BGIOSGA017330 [extracellular region] R-OSI-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8986768 Anther and pollen development none Oryza sativa Indica Group BGIOSGA017365 R-OSI-9025224 BGIOSGA017365 [endoplasmic reticulum lumen] R-OSI-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119502 Allantoin degradation none Oryza sativa Indica Group BGIOSGA017373 R-OSI-1125556 BGIOSGA017373 [cytosol] R-OSI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119410 Ascorbate biosynthesis none Oryza sativa Indica Group BGIOSGA017373 R-OSI-1125556 BGIOSGA017373 [cytosol] R-OSI-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119628 GDP-mannose metabolism none Oryza sativa Indica Group BGIOSGA017374 R-OSI-1125670 BGIOSGA017374 [cytosol] R-OSI-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119393 Asparagine degradation I none Oryza sativa Indica Group BGIOSGA017453 R-OSI-3899348 BGIOSGA017453 [cytosol] R-OSI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-3899351 Abscisic acid (ABA) mediated signaling none Oryza sativa Indica Group BGIOSGA017453 R-OSI-3899348 BGIOSGA017453 [cytosol] R-OSI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9639861 Development of root hair none Oryza sativa Indica Group BGIOSGA017461 R-OSI-9826609 BGIOSGA017461 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA017490 R-OSI-1127562 BGIOSGA017490 [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA017503 R-OSI-1126713 BGIOSGA017503 [endosome] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA017503 R-OSI-5679319 BGIOSGA017503 [plasma membrane] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA017515 R-OSI-1128961 BGIOSGA017515 [mitochondrial matrix] R-OSI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119533 TCA cycle (plant) none Oryza sativa Indica Group BGIOSGA017519 R-OSI-1126157 BGIOSGA017519 [cytosol] R-OSI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119460 Isoleucine biosynthesis from threonine none Oryza sativa Indica Group BGIOSGA017519 R-OSI-1126157 BGIOSGA017519 [cytosol] R-OSI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119600 Valine biosynthesis none Oryza sativa Indica Group BGIOSGA017534 R-OSI-8933788 BGIOSGA017534 [nucleoplasm] R-OSI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8933811 Circadian rhythm none Oryza sativa Indica Group BGIOSGA017570 R-OSI-1129926 BGIOSGA017570 [cytosol] R-OSI-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Oryza sativa Indica Group BGIOSGA017578 R-OSI-1128214 BGIOSGA017578 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA017601 R-OSI-9826667 BGIOSGA017601 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA017625 R-OSI-8854127 BGIOSGA017625 [cytosol] R-OSI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119556 Choline biosynthesis I none Oryza sativa Indica Group BGIOSGA017650 R-OSI-9675857 BGIOSGA017650 [nucleoplasm] R-OSI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675782 Maturation none Oryza sativa Indica Group BGIOSGA017659 R-OSI-4415101 BGIOSGA017659 [cytosol] R-OSI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-3899351 Abscisic acid (ABA) mediated signaling none Oryza sativa Indica Group BGIOSGA017663 R-OSI-1124037 BGIOSGA017663 [mitochondrial matrix] R-OSI-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119289 Arginine degradation none Oryza sativa Indica Group BGIOSGA017671 R-OSI-1122560 BGIOSGA017671 [cytosol] R-OSI-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119331 Cysteine biosynthesis I none Oryza sativa Indica Group BGIOSGA017689 R-OSI-1126609 BGIOSGA017689 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA017692 R-OSI-9607071 BGIOSGA017692 [mitochondrion] R-OSI-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9607185 Generation of superoxide radicals none Oryza sativa Indica Group BGIOSGA017706 R-OSI-1125997 BGIOSGA017706 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA017721 R-OSI-1123733 BGIOSGA017721 [cytosol] R-OSI-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119484 Folate polyglutamylation II none Oryza sativa Indica Group BGIOSGA017742 R-OSI-1128973 BGIOSGA017742 [cytosol] R-OSI-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Oryza sativa Indica Group BGIOSGA017742 R-OSI-1128973 BGIOSGA017742 [cytosol] R-OSI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119438 Secologanin and strictosidine biosynthesis none Oryza sativa Indica Group BGIOSGA017742 R-OSI-1128973 BGIOSGA017742 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA017795 R-OSI-9916179 OsC3H36 [nucleoplasm] R-OSI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9916190 Root angle formation: elongation and curvature response none Oryza sativa Indica Group BGIOSGA017849 R-OSI-8868953 BGIOSGA017849 [endoplasmic reticulum membrane] R-OSI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8868949 Intracellular auxin transport none Oryza sativa Indica Group BGIOSGA017874 R-OSI-1129539 BGIOSGA017874 [cytosol] R-OSI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119610 Biotin biosynthesis II none Oryza sativa Indica Group BGIOSGA017876 R-OSI-9826697 BGIOSGA017876 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA017915 R-OSI-1126172 BGIOSGA017915 [cytosol] R-OSI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119379 Flavin biosynthesis none Oryza sativa Indica Group BGIOSGA017932 R-OSI-1127913 BGIOSGA017932 [cytosol] R-OSI-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119495 Citrulline biosynthesis none Oryza sativa Indica Group BGIOSGA017932 R-OSI-1127913 BGIOSGA017932 [cytosol] R-OSI-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119631 Proline biosynthesis I none Oryza sativa Indica Group BGIOSGA017968 R-OSI-9930249 BGIOSGA017968 [nucleoplasm] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA018007 R-OSI-8987574 BGIOSGA018007 [mitochondrial matrix] R-OSI-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119311 Glycine biosynthesis I none Oryza sativa Indica Group BGIOSGA018017 R-OSI-1123739 BGIOSGA018017 [cytosol] R-OSI-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119261 Salicylate biosynthesis none Oryza sativa Indica Group BGIOSGA018017 R-OSI-1123739 BGIOSGA018017 [cytosol] R-OSI-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119418 Suberin biosynthesis none Oryza sativa Indica Group BGIOSGA018017 R-OSI-1123739 BGIOSGA018017 [cytosol] R-OSI-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119582 Phenylpropanoid biosynthesis, initial reactions none Oryza sativa Indica Group BGIOSGA018065 R-OSI-4723654 BGIOSGA018065 [plastid stroma] R-OSI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119464 Methylerythritol phosphate pathway none Oryza sativa Indica Group BGIOSGA018065 R-OSI-1130030 BGIOSGA018065 [cytosol] R-OSI-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119594 Pyridoxal 5'-phosphate biosynthesis none Oryza sativa Indica Group BGIOSGA018065 R-OSI-1130030 BGIOSGA018065 [cytosol] R-OSI-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119629 Thiamine biosynthesis none Oryza sativa Indica Group BGIOSGA018170 R-OSI-1124657 BGIOSGA018170 [cytosol] R-OSI-1119595 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119595 Mannose degradation none Oryza sativa Indica Group BGIOSGA018170 R-OSI-1124657 BGIOSGA018170 [cytosol] R-OSI-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119601 Trehalose degradation II none Oryza sativa Indica Group BGIOSGA018170 R-OSI-1124657 BGIOSGA018170 [cytosol] R-OSI-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119628 GDP-mannose metabolism none Oryza sativa Indica Group BGIOSGA018248 R-OSI-1124190 BGIOSGA018248 [plastid stroma] R-OSI-1119412 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119412 Chlorophyll a biosynthesis I none Oryza sativa Indica Group BGIOSGA018301 R-OSI-1127076 BGIOSGA018301 [cytosol] R-OSI-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119418 Suberin biosynthesis none Oryza sativa Indica Group BGIOSGA018301 R-OSI-1127076 BGIOSGA018301 [cytosol] R-OSI-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119582 Phenylpropanoid biosynthesis, initial reactions none Oryza sativa Indica Group BGIOSGA018307 R-OSI-1125060 BGIOSGA018307 [cytosol] R-OSI-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119334 Ethylene biosynthesis from methionine none Oryza sativa Indica Group BGIOSGA018307 R-OSI-1125060 BGIOSGA018307 [cytosol] R-OSI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119624 Methionine salvage pathway none Oryza sativa Indica Group BGIOSGA018390 R-OSI-9916298 OsEXPA3 [extracellular region] R-OSI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9916190 Root angle formation: elongation and curvature response none Oryza sativa Indica Group BGIOSGA018498 R-OSI-8987494 BGIOSGA018498 [chloroplast] R-OSI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119312 Photorespiration none Oryza sativa Indica Group BGIOSGA018498 R-OSI-1125951 BGIOSGA018498 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA018513 R-OSI-1123983 BGIOSGA018513 [plastid stroma] R-OSI-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119367 Polyisoprenoid biosynthesis none Oryza sativa Indica Group BGIOSGA018537 R-OSI-1123336 BGIOSGA018537 [cytosol] R-OSI-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119342 Gamma-glutamyl cycle none Oryza sativa Indica Group BGIOSGA018537 R-OSI-1123336 BGIOSGA018537 [cytosol] R-OSI-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119483 Glutathione biosynthesis none Oryza sativa Indica Group BGIOSGA018623 R-OSI-8986849 BGIOSGA018623 [nucleoplasm] R-OSI-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9609102 Flower development none Oryza sativa Indica Group BGIOSGA018648 R-OSI-1126251 BGIOSGA018648 [cytosol] R-OSI-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119334 Ethylene biosynthesis from methionine none Oryza sativa Indica Group BGIOSGA018648 R-OSI-1126251 BGIOSGA018648 [cytosol] R-OSI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119624 Methionine salvage pathway none Oryza sativa Indica Group BGIOSGA018714 R-OSI-1130088 BGIOSGA018714 [plasma membrane] R-OSI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119314 Cellulose biosynthesis none Oryza sativa Indica Group BGIOSGA018719 R-OSI-9918267 ISA2 [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA018725 R-OSI-1125906 BGIOSGA018725 [cytosol] R-OSI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119276 Choline biosynthesis III none Oryza sativa Indica Group BGIOSGA018793 R-OSI-5608164 BGIOSGA018793 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA018793 R-OSI-5608164 BGIOSGA018793 [nucleoplasm] R-OSI-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030557 Lateral root initiation none Oryza sativa Indica Group BGIOSGA018793 R-OSI-5608164 BGIOSGA018793 [nucleoplasm] R-OSI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9608575 Reproductive meristem phase change none Oryza sativa Indica Group BGIOSGA018793 R-OSI-9658967 BGIOSGA018793 [cytosol] R-OSI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9608575 Reproductive meristem phase change none Oryza sativa Indica Group BGIOSGA018825 R-OSI-6787105 BGIOSGA018825 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA018883 R-OSI-9826705 OSH71 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA018898 R-OSI-9611863 BGIOSGA018898 [mitochondrial matrix] R-OSI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119479 Valine degradation none Oryza sativa Indica Group BGIOSGA018909 R-OSI-9681885 BGIOSGA018909 [Golgi membrane] R-OSI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119574 UDP-L-arabinose biosynthesis and transport none Oryza sativa Indica Group BGIOSGA018948 R-OSI-9611477 phospho-phosphorylated-RLCK176 [cytosol] R-OSI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Oryza sativa Indica Group BGIOSGA018972 R-OSI-1124935-2 BGIOSGA018972 [cytosol] R-OSI-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119349 S-methylmethionine cycle none Oryza sativa Indica Group BGIOSGA018973 R-OSI-1124935 BGIOSGA018973 [cytosol] R-OSI-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119349 S-methylmethionine cycle none Oryza sativa Indica Group BGIOSGA019037 R-OSI-9645809 BGIOSGA019037 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA019037 R-OSI-9645809 BGIOSGA019037 [nucleoplasm] R-OSI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675782 Maturation none Oryza sativa Indica Group BGIOSGA019037 R-OSI-9645809 BGIOSGA019037 [nucleoplasm] R-OSI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675885 Lagging strand synthesis none Oryza sativa Indica Group BGIOSGA019071 R-OSI-9639217 BGIOSGA019071 [plasma membrane] R-OSI-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9639136 Response to Aluminum stress none Oryza sativa Indica Group BGIOSGA019114 R-OSI-1127481 BGIOSGA019114 [cytosol] R-OSI-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119342 Gamma-glutamyl cycle none Oryza sativa Indica Group BGIOSGA019114 R-OSI-1127481 BGIOSGA019114 [cytosol] R-OSI-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119483 Glutathione biosynthesis none Oryza sativa Indica Group BGIOSGA019160 R-OSI-9826643 BGIOSGA019160 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA019166 R-OSI-9675790 BGIOSGA019166 [nucleoplasm] R-OSI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675824 DNA replication Initiation none Oryza sativa Indica Group BGIOSGA019232 R-OSI-9645866 BGIOSGA019232 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA019232 R-OSI-9645866 BGIOSGA019232 [nucleoplasm] R-OSI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675824 DNA replication Initiation none Oryza sativa Indica Group BGIOSGA019250 R-OSI-1126549 BGIOSGA019250 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA019284 R-OSI-1129082 BGIOSGA019284 [mitochondrial matrix] R-OSI-1119445 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119445 Beta-alanine biosynthesis II none Oryza sativa Indica Group BGIOSGA019432 R-OSI-1126165 BGIOSGA019432 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA019443 R-OSI-9640786 BGIOSGA019443 [nucleoplasm] R-OSI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640882 Assembly of pre-replication complex none Oryza sativa Indica Group BGIOSGA019443 R-OSI-9640786 BGIOSGA019443 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA019443 R-OSI-9640786 BGIOSGA019443 [nucleoplasm] R-OSI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675824 DNA replication Initiation none Oryza sativa Indica Group BGIOSGA019519 R-OSI-1127414 BGIOSGA019519 [cytosol] R-OSI-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119265 Tetrahydrofolate biosynthesis I none Oryza sativa Indica Group BGIOSGA019582 R-OSI-1122750 BGIOSGA019582 [cytosol] R-OSI-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119353 Linear furanocoumarin biosynthesis none Oryza sativa Indica Group BGIOSGA019609 R-OSI-1124959 BGIOSGA019609 [cytosol] R-OSI-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119623 Acyl-CoA synthetase pathway none Oryza sativa Indica Group BGIOSGA019621 R-OSI-6787257 BGIOSGA019621 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA019621 R-OSI-6787976 BGIOSGA019621 [cytosol] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA019621 R-OSI-6787257 BGIOSGA019621 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA019625 R-OSI-1129811 BGIOSGA019625 [mitochondrion] R-OSI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119403 Removal of superoxide radicals none Oryza sativa Indica Group BGIOSGA019701 R-OSI-9826699 BGIOSGA019701 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA019793 R-OSI-9675464 BGIOSGA019793 [nucleoplasm] R-OSI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030654 Primary root development none Oryza sativa Indica Group BGIOSGA019839 R-OSI-1123337 BGIOSGA019839 [plastid stroma] R-OSI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119509 Histidine biosynthesis I none Oryza sativa Indica Group BGIOSGA019844 R-OSI-5149696 BGIOSGA019844 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA019844 R-OSI-1129945 BGIOSGA019844 [cytosol] R-OSI-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119570 Cytosolic glycolysis none Oryza sativa Indica Group BGIOSGA019854 R-OSI-5679398 BGIOSGA019854 [cytosol] R-OSI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5679411 Gibberellin signaling none Oryza sativa Indica Group BGIOSGA019869 R-OSI-1127916 BGIOSGA019869 [plastid stroma] R-OSI-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119367 Polyisoprenoid biosynthesis none Oryza sativa Indica Group BGIOSGA019869 R-OSI-1127916 BGIOSGA019869 [plastid stroma] R-OSI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119615 Mevalonate pathway none Oryza sativa Indica Group BGIOSGA019876 R-OSI-1126636 BGIOSGA019876 [cytosol] R-OSI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119370 Sterol biosynthesis none Oryza sativa Indica Group BGIOSGA019942 R-OSI-6788154 BGIOSGA019942 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA019953 R-OSI-6787071 BGIOSGA019953 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA019963 R-OSI-9675849 BGIOSGA019963 [nucleoplasm] R-OSI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675824 DNA replication Initiation none Oryza sativa Indica Group BGIOSGA020021 R-OSI-1122451 BGIOSGA020021 [cytosol] R-OSI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119460 Isoleucine biosynthesis from threonine none Oryza sativa Indica Group BGIOSGA020021 R-OSI-1122451 BGIOSGA020021 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA020021 R-OSI-1122451 BGIOSGA020021 [cytosol] R-OSI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119600 Valine biosynthesis none Oryza sativa Indica Group BGIOSGA020022 R-OSI-1122451-2 BGIOSGA020022 [cytosol] R-OSI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119460 Isoleucine biosynthesis from threonine none Oryza sativa Indica Group BGIOSGA020022 R-OSI-1122451-2 BGIOSGA020022 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA020022 R-OSI-1122451-2 BGIOSGA020022 [cytosol] R-OSI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119600 Valine biosynthesis none Oryza sativa Indica Group BGIOSGA020045 R-OSI-9640767 BGIOSGA020045 [nucleoplasm] R-OSI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640882 Assembly of pre-replication complex none Oryza sativa Indica Group BGIOSGA020045 R-OSI-9640767 BGIOSGA020045 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA020045 R-OSI-9640767 BGIOSGA020045 [nucleoplasm] R-OSI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675824 DNA replication Initiation none Oryza sativa Indica Group BGIOSGA020063 R-OSI-9924543 CYP714D1/EUI1 [endoplasmic reticulum membrane] R-OSI-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Oryza sativa Indica Group BGIOSGA020098 R-OSI-1126996 BGIOSGA020098 [cytosol] R-OSI-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119316 Phenylpropanoid biosynthesis none Oryza sativa Indica Group BGIOSGA020099 R-OSI-9916302 BGIOSGA020099 [nucleoplasm] R-OSI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934036 Long day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA020099 R-OSI-9916302 BGIOSGA020099 [nucleoplasm] R-OSI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9916190 Root angle formation: elongation and curvature response none Oryza sativa Indica Group BGIOSGA020101 R-OSI-9681928 BGIOSGA020101 [Golgi membrane] R-OSI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119574 UDP-L-arabinose biosynthesis and transport none Oryza sativa Indica Group BGIOSGA020105 R-OSI-9930304 ACA7 [plasma membrane] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA020106 R-OSI-9025317 BGIOSGA020106 [cytosol] R-OSI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119402 Phospholipid biosynthesis I none Oryza sativa Indica Group BGIOSGA020135 R-OSI-1129208 BGIOSGA020135 [chloroplast envelope] R-OSI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119402 Phospholipid biosynthesis I none Oryza sativa Indica Group BGIOSGA020173 R-OSI-9826682 BGIOSGA020173 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA020188 R-OSI-5608130 BGIOSGA020188 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA020201 R-OSI-1126560 BGIOSGA020201 [cytosol] R-OSI-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119516 Trehalose biosynthesis I none Oryza sativa Indica Group BGIOSGA020250 R-OSI-1129175 BGIOSGA020250 [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA020259 R-OSI-8854108 BGIOSGA020259 [cytosol] R-OSI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119556 Choline biosynthesis I none Oryza sativa Indica Group BGIOSGA020285 R-OSI-9920284 BGIOSGA020285 [nucleoplasm] R-OSI-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934108 Short day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA020289 R-OSI-8879034 HVA1 homolog [vacuolar lumen] R-OSI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8879007 Response to cold temperature none Oryza sativa Indica Group BGIOSGA020314 R-OSI-1123935 BGIOSGA020314 [cytosol] R-OSI-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119262 Threonine biosynthesis from homoserine none Oryza sativa Indica Group BGIOSGA020327 R-OSI-9025372 BGIOSGA020327 [endoplasmic reticulum membrane] R-OSI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119402 Phospholipid biosynthesis I none Oryza sativa Indica Group BGIOSGA020330 R-OSI-5606380 BGIOSGA020330 [plastid stroma] R-OSI-1119535 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119535 Glutamate biosynthesis IV none Oryza sativa Indica Group BGIOSGA020342 R-OSI-1129661 BGIOSGA020342 [cytosol] R-OSI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119460 Isoleucine biosynthesis from threonine none Oryza sativa Indica Group BGIOSGA020342 R-OSI-1129661 BGIOSGA020342 [cytosol] R-OSI-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119496 Pantothenate biosynthesis I none Oryza sativa Indica Group BGIOSGA020342 R-OSI-1129661 BGIOSGA020342 [cytosol] R-OSI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119540 Leucine biosynthesis none Oryza sativa Indica Group BGIOSGA020342 R-OSI-1129661 BGIOSGA020342 [cytosol] R-OSI-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119544 Pantothenate biosynthesis II none Oryza sativa Indica Group BGIOSGA020343 R-OSI-6786999 BGIOSGA020343 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA020345 R-OSI-5654957 BGIOSGA020345 [Golgi lumen] R-OSI-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5654909 Xylan biosynthesis none Oryza sativa Indica Group BGIOSGA020357 R-OSI-5608184 BGIOSGA020357 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA020439 R-OSI-1123482 BGIOSGA020439 [plastid stroma] R-OSI-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119367 Polyisoprenoid biosynthesis none Oryza sativa Indica Group BGIOSGA020457 R-OSI-6787184 BGIOSGA020457 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA020499 R-OSI-1124861 BGIOSGA020499 [plastid stroma] R-OSI-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119449 Carotenoid biosynthesis none Oryza sativa Indica Group BGIOSGA020506 R-OSI-9918274 SBE1 [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA020506 R-OSI-9626342 BGIOSGA020506 [plastid stroma] R-OSI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9626305 Regulatory network of nutrient accumulation none Oryza sativa Indica Group BGIOSGA020574 R-OSI-4827046 BGIOSGA020574 [plastid stroma] R-OSI-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-4827054 Tetrapyrrole biosynthesis I none Oryza sativa Indica Group BGIOSGA020587 R-OSI-3240749 BGIOSGA020587 [cytosol] R-OSI-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Oryza sativa Indica Group BGIOSGA020587 R-OSI-9681918 BGIOSGA020587 [cytosol] R-OSI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119574 UDP-L-arabinose biosynthesis and transport none Oryza sativa Indica Group BGIOSGA020609 R-OSI-9639211 BGIOSGA020609 [plant-type vacuole membrane] R-OSI-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9639136 Response to Aluminum stress none Oryza sativa Indica Group BGIOSGA020618 R-OSI-8933763 BGIOSGA020618 [nucleoplasm] R-OSI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8933811 Circadian rhythm none Oryza sativa Indica Group BGIOSGA020620 R-OSI-9645838 BGIOSGA020620 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA020620 R-OSI-9645838 BGIOSGA020620 [nucleoplasm] R-OSI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675782 Maturation none Oryza sativa Indica Group BGIOSGA020620 R-OSI-9645838 BGIOSGA020620 [nucleoplasm] R-OSI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675885 Lagging strand synthesis none Oryza sativa Indica Group BGIOSGA020633 R-OSI-2685721 BGIOSGA020633 [cytosol] R-OSI-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119580 IAA biosynthesis II none Oryza sativa Indica Group BGIOSGA020682 R-OSI-5608154 BGIOSGA020682 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA020715 R-OSI-5149675 BGIOSGA020715 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA020715 R-OSI-1123828 BGIOSGA020715 [cytosol] R-OSI-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119570 Cytosolic glycolysis none Oryza sativa Indica Group BGIOSGA020717 R-OSI-8987505 BGIOSGA020717 [mitochondrial matrix] R-OSI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119312 Photorespiration none Oryza sativa Indica Group BGIOSGA020719 R-OSI-1125920 BGIOSGA020719 [cytosol] R-OSI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119273 Lysine biosynthesis I none Oryza sativa Indica Group BGIOSGA020719 R-OSI-1125920 BGIOSGA020719 [cytosol] R-OSI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119283 Lysine biosynthesis II none Oryza sativa Indica Group BGIOSGA020721 R-OSI-9658573 BGIOSGA020721 [endoplasmic reticulum lumen] R-OSI-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119502 Allantoin degradation none Oryza sativa Indica Group BGIOSGA020726 R-OSI-3230566 BGIOSGA020726 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA020832 R-OSI-1126400 BGIOSGA020832 [chloroplast] R-OSI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119494 Tryptophan biosynthesis none Oryza sativa Indica Group BGIOSGA020843 R-OSI-1124819 BGIOSGA020843 [cytosol] R-OSI-1119440 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119440 Anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside) none Oryza sativa Indica Group BGIOSGA020843 R-OSI-2672096 BGIOSGA020843 [cytosol] R-OSI-1119514 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119514 Anthocyanin biosynthesis (delphinidin 3-O-glucoside) none Oryza sativa Indica Group BGIOSGA020885 R-OSI-1125277 BGIOSGA020885 [cytosol] R-OSI-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119278 PRPP biosynthesis I none Oryza sativa Indica Group BGIOSGA020897 R-OSI-8987557 BGIOSGA020897 [mitochondrial matrix] R-OSI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119312 Photorespiration none Oryza sativa Indica Group BGIOSGA020921 R-OSI-1124691 BGIOSGA020921 [cytosol] R-OSI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119276 Choline biosynthesis III none Oryza sativa Indica Group BGIOSGA021008 R-OSI-2731026 BGIOSGA021008 [endoplasmic reticulum membrane] R-OSI-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119557 GA12 biosynthesis none Oryza sativa Indica Group BGIOSGA021009 R-OSI-2731035 BGIOSGA021009 [endoplasmic reticulum membrane] R-OSI-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119557 GA12 biosynthesis none Oryza sativa Indica Group BGIOSGA021011 R-OSI-1130405 BGIOSGA021011 [endoplasmic reticulum membrane] R-OSI-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119557 GA12 biosynthesis none Oryza sativa Indica Group BGIOSGA021074 R-OSI-1128914 BGIOSGA021074 [cytosol] R-OSI-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119281 Aspartate biosynthesis I none Oryza sativa Indica Group BGIOSGA021074 R-OSI-5632008 BGIOSGA021074 [plastid stroma] R-OSI-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119553 Asparagine biosynthesis none Oryza sativa Indica Group BGIOSGA021249 R-OSI-6787161 BGIOSGA021249 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA021287 R-OSI-1129547 BGIOSGA021287 [cytosol] R-OSI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119389 Phenylalanine biosynthesis I none Oryza sativa Indica Group BGIOSGA021287 R-OSI-1129547 BGIOSGA021287 [cytosol] R-OSI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119400 Methionine biosynthesis II none Oryza sativa Indica Group BGIOSGA021287 R-OSI-1129547 BGIOSGA021287 [cytosol] R-OSI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119506 tyrosine degradation I none Oryza sativa Indica Group BGIOSGA021322 R-OSI-9025463 BGIOSGA021322 [endoplasmic reticulum membrane] R-OSI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119325 Sphingolipid metabolism none Oryza sativa Indica Group BGIOSGA021489 R-OSI-1122351 BGIOSGA021489 [cytosol] R-OSI-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119354 Asparagine biosynthesis III none Oryza sativa Indica Group BGIOSGA021489 R-OSI-5633281 BGIOSGA021489 [cytosol] R-OSI-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119495 Citrulline biosynthesis none Oryza sativa Indica Group BGIOSGA021489 R-OSI-1122351 BGIOSGA021489 [cytosol] R-OSI-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119553 Asparagine biosynthesis none Oryza sativa Indica Group BGIOSGA021615 R-OSI-9618126 BGIOSGA021615 [plasma membrane] R-OSI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9618218 Arsenic uptake and detoxification none Oryza sativa Indica Group BGIOSGA021618 R-OSI-9025469 BGIOSGA021618 [endoplasmic reticulum membrane] R-OSI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119325 Sphingolipid metabolism none Oryza sativa Indica Group BGIOSGA021621 R-OSI-1122651 BGIOSGA021621 [plastid stroma] R-OSI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119430 Chorismate biosynthesis none Oryza sativa Indica Group BGIOSGA021683 R-OSI-9640707 BGIOSGA021683 [nucleoplasm] R-OSI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640760 G1 phase none Oryza sativa Indica Group BGIOSGA021690 R-OSI-5655095-2 BGIOSGA021690 [Golgi lumen] R-OSI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5655101 Xyloglucan biosynthesis none Oryza sativa Indica Group BGIOSGA021691 R-OSI-5655095 BGIOSGA021691 [Golgi lumen] R-OSI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5655101 Xyloglucan biosynthesis none Oryza sativa Indica Group BGIOSGA021692 R-OSI-5655069 BGIOSGA021692 [Golgi lumen] R-OSI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5655101 Xyloglucan biosynthesis none Oryza sativa Indica Group BGIOSGA021704 R-OSI-8854458 BGIOSGA021704 [cytosol] R-OSI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119276 Choline biosynthesis III none Oryza sativa Indica Group BGIOSGA021739 R-OSI-1124377 BGIOSGA021739 [cytosol] R-OSI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119452 Galactose degradation II none Oryza sativa Indica Group BGIOSGA021739 R-OSI-1124377 BGIOSGA021739 [cytosol] R-OSI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119465 Sucrose biosynthesis none Oryza sativa Indica Group BGIOSGA021761 R-OSI-1125911 BGIOSGA021761 [cytosol] R-OSI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119428 GDP-D-rhamnose biosynthesis none Oryza sativa Indica Group BGIOSGA021761 R-OSI-1125911 BGIOSGA021761 [cytosol] R-OSI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Oryza sativa Indica Group BGIOSGA021834 R-OSI-5608174 BGIOSGA021834 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA021835 R-OSI-5608174-2 BGIOSGA021835 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA021860 R-OSI-1128586 BGIOSGA021860 [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA021881 R-OSI-1125355 BGIOSGA021881 [cytosol] R-OSI-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119265 Tetrahydrofolate biosynthesis I none Oryza sativa Indica Group BGIOSGA021881 R-OSI-1125355 BGIOSGA021881 [cytosol] R-OSI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119523 Tetrahydrofolate biosynthesis II none Oryza sativa Indica Group BGIOSGA021882 R-OSI-9675391 BGIOSGA021882 [nucleoplasm] R-OSI-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675508 Root elongation none Oryza sativa Indica Group BGIOSGA021907 R-OSI-1127799 BGIOSGA021907 [cytosol] R-OSI-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119342 Gamma-glutamyl cycle none Oryza sativa Indica Group BGIOSGA021907 R-OSI-1127799 BGIOSGA021907 [cytosol] R-OSI-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119483 Glutathione biosynthesis none Oryza sativa Indica Group BGIOSGA021950 R-OSI-4723660 BGIOSGA021950 [plastid stroma] R-OSI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119464 Methylerythritol phosphate pathway none Oryza sativa Indica Group BGIOSGA021950 R-OSI-1125869 BGIOSGA021950 [cytosol] R-OSI-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119594 Pyridoxal 5'-phosphate biosynthesis none Oryza sativa Indica Group BGIOSGA021950 R-OSI-1125869 BGIOSGA021950 [cytosol] R-OSI-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119629 Thiamine biosynthesis none Oryza sativa Indica Group BGIOSGA021953 R-OSI-8933860 BGIOSGA021953 [nucleoplasm] R-OSI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8933811 Circadian rhythm none Oryza sativa Indica Group BGIOSGA021953 R-OSI-8933860 BGIOSGA021953 [nucleoplasm] R-OSI-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9928946 Drought escape (DE) via ABA-independent pathway none Oryza sativa Indica Group BGIOSGA021980 R-OSI-8878987 BGIOSGA021980 [nucleoplasm] R-OSI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8879007 Response to cold temperature none Oryza sativa Indica Group BGIOSGA021999 R-OSI-1130247 BGIOSGA021999 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA022007 R-OSI-1123832 BGIOSGA022007 [cytosol] R-OSI-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119304 Putrescine biosynthesis II none Oryza sativa Indica Group BGIOSGA022007 R-OSI-1123832 BGIOSGA022007 [cytosol] R-OSI-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119447 Putrescine biosynthesis I none Oryza sativa Indica Group BGIOSGA022020 R-OSI-5632261 BGIOSGA022020 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA022060 R-OSI-1125399 BGIOSGA022060 [plastid] R-OSI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119403 Removal of superoxide radicals none Oryza sativa Indica Group BGIOSGA022088 R-OSI-9639892 BGIOSGA022088 [cell wall] R-OSI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9639861 Development of root hair none Oryza sativa Indica Group BGIOSGA022107 R-OSI-5608093 BGIOSGA022107 [plasma membrane] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA022113 R-OSI-1127734 BGIOSGA022113 [cytosol] R-OSI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119506 tyrosine degradation I none Oryza sativa Indica Group BGIOSGA022116 R-OSI-6787880 BGIOSGA022116 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA022171 R-OSI-1123561 BGIOSGA022171 [cytosol] R-OSI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119624 Methionine salvage pathway none Oryza sativa Indica Group BGIOSGA022219 R-OSI-8879085 BGIOSGA022219 [nucleoplasm] R-OSI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8879007 Response to cold temperature none Oryza sativa Indica Group BGIOSGA022241 R-OSI-9918210 granule-bound starch synthase 1 (GBSSI, or Waxy) [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA022241 R-OSI-9626344 BGIOSGA022241 [plastid stroma] R-OSI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9626305 Regulatory network of nutrient accumulation none Oryza sativa Indica Group BGIOSGA022246 R-OSI-1128197 BGIOSGA022246 [plastid stroma] R-OSI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119430 Chorismate biosynthesis none Oryza sativa Indica Group BGIOSGA022260 R-OSI-1129282 BGIOSGA022260 [cytosol] R-OSI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119428 GDP-D-rhamnose biosynthesis none Oryza sativa Indica Group BGIOSGA022260 R-OSI-1129282 BGIOSGA022260 [cytosol] R-OSI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Oryza sativa Indica Group BGIOSGA022277 R-OSI-1129355 BGIOSGA022277 [plastid] R-OSI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119403 Removal of superoxide radicals none Oryza sativa Indica Group BGIOSGA022295 R-OSI-9658729 BGIOSGA022295 [cytosol] R-OSI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119389 Phenylalanine biosynthesis I none Oryza sativa Indica Group BGIOSGA022295 R-OSI-9658729 BGIOSGA022295 [cytosol] R-OSI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119506 tyrosine degradation I none Oryza sativa Indica Group BGIOSGA022338 R-OSI-5654840 BGIOSGA022338 [nucleoplasm] R-OSI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5654828 Strigolactone signaling none Oryza sativa Indica Group BGIOSGA022338 R-OSI-5654840 BGIOSGA022338 [nucleoplasm] R-OSI-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Oryza sativa Indica Group BGIOSGA022349 R-OSI-8934104 BGIOSGA022349 [nucleoplasm] R-OSI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934036 Long day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA022349 R-OSI-8934104 BGIOSGA022349 [nucleoplasm] R-OSI-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934108 Short day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA022349 R-OSI-8934104 BGIOSGA022349 [nucleoplasm] R-OSI-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934257 Transition from vegetative to reproductive shoot apical meristem none Oryza sativa Indica Group BGIOSGA022349 R-OSI-9927887 BGIOSGA022349 [cytosol] R-OSI-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934257 Transition from vegetative to reproductive shoot apical meristem none Oryza sativa Indica Group BGIOSGA022349 R-OSI-8934104 BGIOSGA022349 [nucleoplasm] R-OSI-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9928946 Drought escape (DE) via ABA-independent pathway none Oryza sativa Indica Group BGIOSGA022349 R-OSI-8934104 BGIOSGA022349 [nucleoplasm] R-OSI-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9928995 Drought escape (DE) via ABA-dependent pathway none Oryza sativa Indica Group BGIOSGA022380 R-OSI-8879009 BGIOSGA022380 [nucleoplasm] R-OSI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8879007 Response to cold temperature none Oryza sativa Indica Group BGIOSGA022383 R-OSI-1125288 BGIOSGA022383 [plastid stroma] R-OSI-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119367 Polyisoprenoid biosynthesis none Oryza sativa Indica Group BGIOSGA022410 R-OSI-1125261 BGIOSGA022410 R-OSI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119400 Methionine biosynthesis II none Oryza sativa Indica Group BGIOSGA022413 R-OSI-1129485 BGIOSGA022413 [cytosol] R-OSI-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119341 Galactosylcyclitol biosynthesis none Oryza sativa Indica Group BGIOSGA022427 R-OSI-9675476 BGIOSGA022427 [nucleoplasm] R-OSI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030654 Primary root development none Oryza sativa Indica Group BGIOSGA022438 R-OSI-1128173 BGIOSGA022438 [cytosol] R-OSI-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119437 Glutathione redox reactions I none Oryza sativa Indica Group BGIOSGA022441 R-OSI-9640675 BGIOSGA022441 [nucleoplasm] R-OSI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640882 Assembly of pre-replication complex none Oryza sativa Indica Group BGIOSGA022441 R-OSI-9640675 BGIOSGA022441 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA022468 R-OSI-5608125 BGIOSGA022468 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA022523 R-OSI-9611524 LYP6 [plasma membrane] R-OSI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Oryza sativa Indica Group BGIOSGA022543 R-OSI-5655090 BGIOSGA022543 [Golgi lumen] R-OSI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5655101 Xyloglucan biosynthesis none Oryza sativa Indica Group BGIOSGA022586 R-OSI-9918260 soluble Starch Synthase (SSII-3/SSIIa) [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA022592 R-OSI-1124759 BGIOSGA022592 [endosome] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA022592 R-OSI-5679306 BGIOSGA022592 [plasma membrane] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA022643 R-OSI-1128922 BGIOSGA022643 [cytosol] R-OSI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119410 Ascorbate biosynthesis none Oryza sativa Indica Group BGIOSGA022643 R-OSI-1128922 BGIOSGA022643 [cytosol] R-OSI-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119570 Cytosolic glycolysis none Oryza sativa Indica Group BGIOSGA022654 R-OSI-5149644 BGIOSGA022654 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA022657 R-OSI-9826604 BGIOSGA022657 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA022671 R-OSI-1128334 BGIOSGA022671 [mitochondrial matrix] R-OSI-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119337 Proline degradation none Oryza sativa Indica Group BGIOSGA022685 R-OSI-8934168 BGIOSGA022685 [nucleoplasm] R-OSI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934036 Long day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA022685 R-OSI-8934168 BGIOSGA022685 [nucleoplasm] R-OSI-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934108 Short day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA022685 R-OSI-9920270 BGIOSGA022685 [nucleoplasm] R-OSI-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934108 Short day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA022685 R-OSI-8934168 BGIOSGA022685 [nucleoplasm] R-OSI-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9928946 Drought escape (DE) via ABA-independent pathway none Oryza sativa Indica Group BGIOSGA022807 R-OSI-1130152 BGIOSGA022807 [cytosol] R-OSI-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119394 Pantothenate and coenzyme A biosynthesis III none Oryza sativa Indica Group BGIOSGA022834 R-OSI-5608120 BGIOSGA022834 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA022838 R-OSI-1124613 BGIOSGA022838 [plasma membrane] R-OSI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119314 Cellulose biosynthesis none Oryza sativa Indica Group BGIOSGA022844 R-OSI-1128902 BGIOSGA022844 [cytosol] R-OSI-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119271 Threonine degradation none Oryza sativa Indica Group BGIOSGA022844 R-OSI-1128902 BGIOSGA022844 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA022845 R-OSI-1122536 BGIOSGA022845 [cytosol] R-OSI-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119271 Threonine degradation none Oryza sativa Indica Group BGIOSGA022845 R-OSI-1122536 BGIOSGA022845 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA022845 R-OSI-9658645 BGIOSGA022845 [cytosol] R-OSI-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119567 Beta-alanine biosynthesis I none Oryza sativa Indica Group BGIOSGA022914 R-OSI-9918159 BGIOSGA022914 [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA023029 R-OSI-1123059 BGIOSGA023029 [cytosol] R-OSI-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119317 Spermine biosynthesis none Oryza sativa Indica Group BGIOSGA023029 R-OSI-1123059 BGIOSGA023029 [cytosol] R-OSI-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119343 Spermidine biosynthesis none Oryza sativa Indica Group BGIOSGA023093 R-OSI-1127523 BGIOSGA023093 [cytosol] R-OSI-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Oryza sativa Indica Group BGIOSGA023128 R-OSI-5632120 BGIOSGA023128 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA023222 R-OSI-1123403 BGIOSGA023222 [cytosol] R-OSI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119276 Choline biosynthesis III none Oryza sativa Indica Group BGIOSGA023223 R-OSI-1127170 BGIOSGA023223 [cytosol] R-OSI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119276 Choline biosynthesis III none Oryza sativa Indica Group BGIOSGA023247 R-OSI-5149694 BGIOSGA023247 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA023288 R-OSI-1126658 BGIOSGA023288 [cytosol] R-OSI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119438 Secologanin and strictosidine biosynthesis none Oryza sativa Indica Group BGIOSGA023383 R-OSI-1125014 BGIOSGA023383 [cytosol] R-OSI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Oryza sativa Indica Group BGIOSGA023413 R-OSI-8858085 BGIOSGA023413 [plasma membrane] R-OSI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8858053 Polar auxin transport none Oryza sativa Indica Group BGIOSGA023413 R-OSI-8858085 BGIOSGA023413 [plasma membrane] R-OSI-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924494 Gravity sensing and statolith sedimentation none Oryza sativa Indica Group BGIOSGA023413 R-OSI-9928298 PIN2 [endosome] R-OSI-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924494 Gravity sensing and statolith sedimentation none Oryza sativa Indica Group BGIOSGA023429 R-OSI-6787134 BGIOSGA023429 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA023429 R-OSI-6787188 BGIOSGA023429 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA023442 R-OSI-9826627 OSMPH1 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA023460 R-OSI-1128624 BGIOSGA023460 [mitochondrial inner membrane] R-OSI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119479 Valine degradation none Oryza sativa Indica Group BGIOSGA023490 R-OSI-5608129 BGIOSGA023490 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA023558 R-OSI-9681920 BGIOSGA023558 [cytosol] R-OSI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119574 UDP-L-arabinose biosynthesis and transport none Oryza sativa Indica Group BGIOSGA023663 R-OSI-1126883 BGIOSGA023663 [cytosol] R-OSI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119389 Phenylalanine biosynthesis I none Oryza sativa Indica Group BGIOSGA023694 R-OSI-6787018 BGIOSGA023694 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA023726 R-OSI-9826657 BGIOSGA023726 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA023742 R-OSI-1123477 BGIOSGA023742 [cytosol] R-OSI-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119451 Xylose degradation none Oryza sativa Indica Group BGIOSGA023751 R-OSI-8934069 BGIOSGA023751 [nucleoplasm] R-OSI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934036 Long day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA023751 R-OSI-8934069 BGIOSGA023751 [nucleoplasm] R-OSI-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934108 Short day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA023771 R-OSI-1129311 BGIOSGA023771 [cytosol] R-OSI-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Oryza sativa Indica Group BGIOSGA023784 R-OSI-5603891 BGIOSGA023784 [plastid stroma] R-OSI-1119420 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119420 Glutamate biosynthesis V none Oryza sativa Indica Group BGIOSGA023784 R-OSI-1125410 BGIOSGA023784 [chloroplast stroma] R-OSI-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119443 Ammonia assimilation cycle none Oryza sativa Indica Group BGIOSGA023841 R-OSI-9916134-2 OsPRX105 [extracellular region] R-OSI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119403 Removal of superoxide radicals none Oryza sativa Indica Group BGIOSGA023841 R-OSI-9916134-2 OsPRX105 [extracellular region] R-OSI-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9607185 Generation of superoxide radicals none Oryza sativa Indica Group BGIOSGA023868 R-OSI-9640752 BGIOSGA023868 [nucleoplasm] R-OSI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640882 Assembly of pre-replication complex none Oryza sativa Indica Group BGIOSGA023868 R-OSI-9640752 BGIOSGA023868 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA023874 R-OSI-9025443 BGIOSGA023874 [endoplasmic reticulum membrane] R-OSI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119325 Sphingolipid metabolism none Oryza sativa Indica Group BGIOSGA023890 R-OSI-1122845 BGIOSGA023890 [plastid stroma] R-OSI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119430 Chorismate biosynthesis none Oryza sativa Indica Group BGIOSGA023939 R-OSI-6787141 BGIOSGA023939 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA023978 R-OSI-6788084 BGIOSGA023978 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA023981 R-OSI-1123819 BGIOSGA023981 [plastid stroma] R-OSI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119464 Methylerythritol phosphate pathway none Oryza sativa Indica Group BGIOSGA024018 R-OSI-5632334 BGIOSGA024018 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA024018 R-OSI-5632197 phospho-BGIOSGA024018 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA024018 R-OSI-5632183 phospho-BGIOSGA024018 [cytosol] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA024018 R-OSI-5632334 BGIOSGA024018 [nucleoplasm] R-OSI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5679411 Gibberellin signaling none Oryza sativa Indica Group BGIOSGA024094 R-OSI-9025789 BGIOSGA024094 [cytosol] R-OSI-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9025754 Mugineic acid biosynthesis none Oryza sativa Indica Group BGIOSGA024144 R-OSI-1122287 BGIOSGA024144 [cytosol] R-OSI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119438 Secologanin and strictosidine biosynthesis none Oryza sativa Indica Group BGIOSGA024145 R-OSI-1122287-2 BGIOSGA024145 [cytosol] R-OSI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119438 Secologanin and strictosidine biosynthesis none Oryza sativa Indica Group BGIOSGA024185 R-OSI-1125494 BGIOSGA024185 [endoplasmic reticulum membrane] R-OSI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119402 Phospholipid biosynthesis I none Oryza sativa Indica Group BGIOSGA024237 R-OSI-1129739 BGIOSGA024237 [cytosol] R-OSI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119389 Phenylalanine biosynthesis I none Oryza sativa Indica Group BGIOSGA024247 R-OSI-9638996 BGIOSGA024247 [cytosol] R-OSI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119434 Phytic acid biosynthesis (lipid-independent) none Oryza sativa Indica Group BGIOSGA024253 R-OSI-9035727 BGIOSGA024253 [cytosol] R-OSI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9035605 Regulation of seed size none Oryza sativa Indica Group BGIOSGA024253 R-OSI-9035692 BGIOSGA024253 [nucleoplasm] R-OSI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9035605 Regulation of seed size none Oryza sativa Indica Group BGIOSGA024271 R-OSI-9675357 BGIOSGA024271 [nucleoplasm] R-OSI-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030680 Crown root development none Oryza sativa Indica Group BGIOSGA024301 R-OSI-1123575 BGIOSGA024301 [cytosol] R-OSI-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119297 Beta-alanine biosynthesis III none Oryza sativa Indica Group BGIOSGA024357 R-OSI-1125467 BGIOSGA024357 [cytosol] R-OSI-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119342 Gamma-glutamyl cycle none Oryza sativa Indica Group BGIOSGA024357 R-OSI-1125467 BGIOSGA024357 [cytosol] R-OSI-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119483 Glutathione biosynthesis none Oryza sativa Indica Group BGIOSGA024358 R-OSI-5138490 BGIOSGA024358 [plastid stroma] R-OSI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119263 Arginine biosynthesis none Oryza sativa Indica Group BGIOSGA024358 R-OSI-5138490 BGIOSGA024358 [plastid stroma] R-OSI-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119539 Ornithine biosynthesis none Oryza sativa Indica Group BGIOSGA024358 R-OSI-5138490 BGIOSGA024358 [plastid stroma] R-OSI-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119622 Arginine biosynthesis II (acetyl cycle) none Oryza sativa Indica Group BGIOSGA024410 R-OSI-1124598 BGIOSGA024410 [cytosol] R-OSI-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119300 Glycolipid desaturation none Oryza sativa Indica Group BGIOSGA024424 R-OSI-9918222 BGIOSGA024424 [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA024435 R-OSI-1127254 BGIOSGA024435 [cytosol] R-OSI-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119317 Spermine biosynthesis none Oryza sativa Indica Group BGIOSGA024435 R-OSI-1127254 BGIOSGA024435 [cytosol] R-OSI-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119343 Spermidine biosynthesis none Oryza sativa Indica Group BGIOSGA024439 R-OSI-9646043 BGIOSGA024439 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA024439 R-OSI-9646043 BGIOSGA024439 [nucleoplasm] R-OSI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675782 Maturation none Oryza sativa Indica Group BGIOSGA024439 R-OSI-9646043 BGIOSGA024439 [nucleoplasm] R-OSI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675815 Leading strand synthesis none Oryza sativa Indica Group BGIOSGA024439 R-OSI-9646043 BGIOSGA024439 [nucleoplasm] R-OSI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675824 DNA replication Initiation none Oryza sativa Indica Group BGIOSGA024439 R-OSI-9646043 BGIOSGA024439 [nucleoplasm] R-OSI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675885 Lagging strand synthesis none Oryza sativa Indica Group BGIOSGA024502 R-OSI-8934002 BGIOSGA024502 [nucleoplasm] R-OSI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934036 Long day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA024502 R-OSI-9927770 phospho-BGIOSGA024502 [nucleoplasm] R-OSI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934036 Long day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA024502 R-OSI-8934002 BGIOSGA024502 [nucleoplasm] R-OSI-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9928946 Drought escape (DE) via ABA-independent pathway none Oryza sativa Indica Group BGIOSGA024502 R-OSI-8934002 BGIOSGA024502 [nucleoplasm] R-OSI-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9928995 Drought escape (DE) via ABA-dependent pathway none Oryza sativa Indica Group BGIOSGA024503 R-OSI-1124956 BGIOSGA024503 [cytosol] R-OSI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119276 Choline biosynthesis III none Oryza sativa Indica Group BGIOSGA024525 R-OSI-2685737 BGIOSGA024525 [cytosol] R-OSI-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119580 IAA biosynthesis II none Oryza sativa Indica Group BGIOSGA024526 R-OSI-2685738 BGIOSGA024526 [cytosol] R-OSI-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119580 IAA biosynthesis II none Oryza sativa Indica Group BGIOSGA024540 R-OSI-1129161 BGIOSGA024540 [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA024576 R-OSI-9025329 BGIOSGA024576 [chloroplast stroma] R-OSI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119402 Phospholipid biosynthesis I none Oryza sativa Indica Group BGIOSGA024576 R-OSI-1125388 BGIOSGA024576 [cytosol] R-OSI-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119496 Pantothenate biosynthesis I none Oryza sativa Indica Group BGIOSGA024576 R-OSI-1125388 BGIOSGA024576 [cytosol] R-OSI-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119544 Pantothenate biosynthesis II none Oryza sativa Indica Group BGIOSGA024606 R-OSI-1125648 BGIOSGA024606 [cytosol] R-OSI-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119513 Pinobanksin biosynthesis none Oryza sativa Indica Group BGIOSGA024606 R-OSI-1125648 BGIOSGA024606 [cytosol] R-OSI-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119531 Flavonoid biosynthesis none Oryza sativa Indica Group BGIOSGA024606 R-OSI-1125648 BGIOSGA024606 [cytosol] R-OSI-1119630 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119630 Resveratrol biosynthesis none Oryza sativa Indica Group BGIOSGA024622 R-OSI-2885386 BGIOSGA024622 [cytosol] R-OSI-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119417 Stachyose biosynthesis none Oryza sativa Indica Group BGIOSGA024623 R-OSI-1123087 BGIOSGA024623 [plasma membrane] R-OSI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119314 Cellulose biosynthesis none Oryza sativa Indica Group BGIOSGA024630 R-OSI-1126307 BGIOSGA024630 [cytosol] R-OSI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119370 Sterol biosynthesis none Oryza sativa Indica Group BGIOSGA024666 R-OSI-1123046 BGIOSGA024666 [cytosol] R-OSI-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119386 UDP-N-acetylgalactosamine biosynthesis none Oryza sativa Indica Group BGIOSGA024712 R-OSI-1128354 BGIOSGA024712 [chloroplast] R-OSI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119494 Tryptophan biosynthesis none Oryza sativa Indica Group BGIOSGA024719 R-OSI-3321270 BGIOSGA024719 [chloroplast inner membrane] R-OSI-1119287 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119287 Vitamin E biosynthesis none Oryza sativa Indica Group BGIOSGA024728 R-OSI-1127705 BGIOSGA024728 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA024747 R-OSI-9611864 BGIOSGA024747 [mitochondrial matrix] R-OSI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119479 Valine degradation none Oryza sativa Indica Group BGIOSGA024779 R-OSI-1127467 BGIOSGA024779 [cytosol] R-OSI-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119456 Brassinosteroid biosynthesis II none Oryza sativa Indica Group BGIOSGA024803 R-OSI-9924360 BGIOSGA024803 [nucleoplasm] R-OSI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924451 Shoot (tiller) formation and regulation of tiller angle none Oryza sativa Indica Group BGIOSGA024807 R-OSI-6787000 BGIOSGA024807 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA024807 R-OSI-6787036 BGIOSGA024807 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA024863 R-OSI-1129247 BGIOSGA024863 [mitochondrial inner membrane] R-OSI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119533 TCA cycle (plant) none Oryza sativa Indica Group BGIOSGA024961 R-OSI-8934299 BGIOSGA024961 [nucleoplasm] R-OSI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934036 Long day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA024961 R-OSI-8934299 BGIOSGA024961 [nucleoplasm] R-OSI-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934257 Transition from vegetative to reproductive shoot apical meristem none Oryza sativa Indica Group BGIOSGA024961 R-OSI-8934299 BGIOSGA024961 [nucleoplasm] R-OSI-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9609102 Flower development none Oryza sativa Indica Group BGIOSGA024963 R-OSI-8987548 BGIOSGA024963 [peroxisomal matrix] R-OSI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119312 Photorespiration none Oryza sativa Indica Group BGIOSGA024984 R-OSI-1129219 BGIOSGA024984 [cytosol] R-OSI-1119323 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119323 Lipid-A-precursor biosynthesis none Oryza sativa Indica Group BGIOSGA024996 R-OSI-1126987 BGIOSGA024996 [cytosol] R-OSI-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Oryza sativa Indica Group BGIOSGA024996 R-OSI-1126987 BGIOSGA024996 [cytosol] R-OSI-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119439 Cholesterol biosynthesis III (via desmosterol) none Oryza sativa Indica Group BGIOSGA024996 R-OSI-1126987 BGIOSGA024996 [cytosol] R-OSI-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119559 Cholesterol biosynthesis I none Oryza sativa Indica Group BGIOSGA025001 R-OSI-1128069 BGIOSGA025001 [cytosol] R-OSI-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Oryza sativa Indica Group BGIOSGA025001 R-OSI-1128069 BGIOSGA025001 [cytosol] R-OSI-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Oryza sativa Indica Group BGIOSGA025004 R-OSI-9916124 OsPRX95 [extracellular region] R-OSI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119403 Removal of superoxide radicals none Oryza sativa Indica Group BGIOSGA025004 R-OSI-9916124 OsPRX95 [extracellular region] R-OSI-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9607185 Generation of superoxide radicals none Oryza sativa Indica Group BGIOSGA025091 R-OSI-9826652 OSH15 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA025123 R-OSI-1125489 BGIOSGA025123 [Golgi membrane] R-OSI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119428 GDP-D-rhamnose biosynthesis none Oryza sativa Indica Group BGIOSGA025123 R-OSI-1125489 BGIOSGA025123 [Golgi membrane] R-OSI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119574 UDP-L-arabinose biosynthesis and transport none Oryza sativa Indica Group BGIOSGA025123 R-OSI-1125489 BGIOSGA025123 [Golgi membrane] R-OSI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Oryza sativa Indica Group BGIOSGA025137 R-OSI-5632266 BGIOSGA025137 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA025137 R-OSI-5632266 BGIOSGA025137 [nucleoplasm] R-OSI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5679411 Gibberellin signaling none Oryza sativa Indica Group BGIOSGA025165 R-OSI-8987473 BGIOSGA025165 [peroxisomal matrix] R-OSI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119312 Photorespiration none Oryza sativa Indica Group BGIOSGA025165 R-OSI-1122329 BGIOSGA025165 [cytosol] R-OSI-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119596 Glutamate biosynthesis I none Oryza sativa Indica Group BGIOSGA025169 R-OSI-5221149 BGIOSGA025169 [plastid] R-OSI-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119374 Abscisic acid biosynthesis none Oryza sativa Indica Group BGIOSGA025213 R-OSI-1128322 BGIOSGA025213 [cytosol] R-OSI-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119384 NAD biosynthesis I (from aspartate) none Oryza sativa Indica Group BGIOSGA025300 R-OSI-5655007 BGIOSGA025300 [Golgi lumen] R-OSI-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5655010 Xylogalacturonan biosynthesis none Oryza sativa Indica Group BGIOSGA025301 R-OSI-1126269 BGIOSGA025301 [mitochondrial matrix] R-OSI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119479 Valine degradation none Oryza sativa Indica Group BGIOSGA025304 R-OSI-4723663 BGIOSGA025304 [plastid stroma] R-OSI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119464 Methylerythritol phosphate pathway none Oryza sativa Indica Group BGIOSGA025304 R-OSI-1126491 BGIOSGA025304 [cytosol] R-OSI-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119594 Pyridoxal 5'-phosphate biosynthesis none Oryza sativa Indica Group BGIOSGA025304 R-OSI-1126491 BGIOSGA025304 [cytosol] R-OSI-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119629 Thiamine biosynthesis none Oryza sativa Indica Group BGIOSGA025315 R-OSI-4788601 BGIOSGA025315 [plastid stroma] R-OSI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119509 Histidine biosynthesis I none Oryza sativa Indica Group BGIOSGA025337 R-OSI-1123465 BGIOSGA025337 [plastid stroma] R-OSI-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119424 Plastid glycolysis none Oryza sativa Indica Group BGIOSGA025337 R-OSI-5633368 BGIOSGA025337 [cytosol] R-OSI-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119601 Trehalose degradation II none Oryza sativa Indica Group BGIOSGA025344 R-OSI-1128707 BGIOSGA025344 [cytosol] R-OSI-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Oryza sativa Indica Group BGIOSGA025344 R-OSI-1128707 BGIOSGA025344 [cytosol] R-OSI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119370 Sterol biosynthesis none Oryza sativa Indica Group BGIOSGA025344 R-OSI-1128707 BGIOSGA025344 [cytosol] R-OSI-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119439 Cholesterol biosynthesis III (via desmosterol) none Oryza sativa Indica Group BGIOSGA025344 R-OSI-1128707 BGIOSGA025344 [cytosol] R-OSI-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119559 Cholesterol biosynthesis I none Oryza sativa Indica Group BGIOSGA025365 R-OSI-1125038 BGIOSGA025365 [plastid stroma] R-OSI-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119449 Carotenoid biosynthesis none Oryza sativa Indica Group BGIOSGA025379 R-OSI-9675274 BGIOSGA025379 [nucleoplasm] R-OSI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030654 Primary root development none Oryza sativa Indica Group BGIOSGA025410 R-OSI-9930180 OsNAC3 [nucleoplasm] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA025426 R-OSI-9608621 BGIOSGA025426 [cytosol] R-OSI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9608575 Reproductive meristem phase change none Oryza sativa Indica Group BGIOSGA025426 R-OSI-9608648 BGIOSGA025426 [nucleoplasm] R-OSI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9608575 Reproductive meristem phase change none Oryza sativa Indica Group BGIOSGA025436 R-OSI-1128396 BGIOSGA025436 [cytosol] R-OSI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119473 Cytokinins-O-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA025439 R-OSI-1123470 BGIOSGA025439 [cytosol] R-OSI-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119292 Cytokinins 7-N-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA025439 R-OSI-1123470 BGIOSGA025439 [cytosol] R-OSI-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119375 Cytokinins 9-N-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA025439 R-OSI-1123470 BGIOSGA025439 [cytosol] R-OSI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119473 Cytokinins-O-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA025441 R-OSI-1123860 BGIOSGA025441 [cytosol] R-OSI-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119292 Cytokinins 7-N-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA025441 R-OSI-1123860 BGIOSGA025441 [cytosol] R-OSI-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119375 Cytokinins 9-N-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA025441 R-OSI-1123860 BGIOSGA025441 [cytosol] R-OSI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119473 Cytokinins-O-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA025442 R-OSI-1128131 BGIOSGA025442 [cytosol] R-OSI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119473 Cytokinins-O-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA025476 R-OSI-9025739 BGIOSGA025476 [plasma membrane] R-OSI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9025727 Iron uptake and transport in root vascular system none Oryza sativa Indica Group BGIOSGA025476 R-OSI-9025739 BGIOSGA025476 [plasma membrane] R-OSI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9618218 Arsenic uptake and detoxification none Oryza sativa Indica Group BGIOSGA025495 R-OSI-6788234 BGIOSGA025495 [cytosol] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA025495 R-OSI-1124041 BGIOSGA025495 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA025520 R-OSI-1250419 BGIOSGA025520 [cytosol] R-OSI-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119374 Abscisic acid biosynthesis none Oryza sativa Indica Group BGIOSGA025520 R-OSI-1129637 BGIOSGA025520 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA025615 R-OSI-9918201 BGIOSGA025615 [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA025616 R-OSI-9618056 BGIOSGA025616 [plasma membrane] R-OSI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9618218 Arsenic uptake and detoxification none Oryza sativa Indica Group BGIOSGA025656 R-OSI-1124373 BGIOSGA025656 [cytosol] R-OSI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119370 Sterol biosynthesis none Oryza sativa Indica Group BGIOSGA025736 R-OSI-1128012 BGIOSGA025736 [cytosol] R-OSI-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119456 Brassinosteroid biosynthesis II none Oryza sativa Indica Group BGIOSGA025741 R-OSI-9658589 BGIOSGA025741 [endoplasmic reticulum lumen] R-OSI-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119502 Allantoin degradation none Oryza sativa Indica Group BGIOSGA025742 R-OSI-8933730 BGIOSGA025742 [nucleoplasm] R-OSI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8933811 Circadian rhythm none Oryza sativa Indica Group BGIOSGA025745 R-OSI-5146760 BGIOSGA025745 [mitochondrial matrix] R-OSI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119533 TCA cycle (plant) none Oryza sativa Indica Group BGIOSGA025827 R-OSI-1124066 BGIOSGA025827 [mitochondrial inner membrane] R-OSI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119533 TCA cycle (plant) none Oryza sativa Indica Group BGIOSGA025896 R-OSI-1122287-3 BGIOSGA025896 [cytosol] R-OSI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119438 Secologanin and strictosidine biosynthesis none Oryza sativa Indica Group BGIOSGA025962 R-OSI-1128871 BGIOSGA025962 [cytosol] R-OSI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119370 Sterol biosynthesis none Oryza sativa Indica Group BGIOSGA025978 R-OSI-9658656 BGIOSGA025978 [cytosol] R-OSI-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119271 Threonine degradation none Oryza sativa Indica Group BGIOSGA025978 R-OSI-9658656 BGIOSGA025978 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA025978 R-OSI-9658656 BGIOSGA025978 [cytosol] R-OSI-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119567 Beta-alanine biosynthesis I none Oryza sativa Indica Group BGIOSGA026004 R-OSI-1125237 BGIOSGA026004 [mitochondrial matrix] R-OSI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119533 TCA cycle (plant) none Oryza sativa Indica Group BGIOSGA026095 R-OSI-9681895 BGIOSGA026095 [Golgi membrane] R-OSI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119574 UDP-L-arabinose biosynthesis and transport none Oryza sativa Indica Group BGIOSGA026103 R-OSI-1125910 BGIOSGA026103 [plastid stroma] R-OSI-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119367 Polyisoprenoid biosynthesis none Oryza sativa Indica Group BGIOSGA026125 R-OSI-1123534 BGIOSGA026125 [cytosol] R-OSI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119438 Secologanin and strictosidine biosynthesis none Oryza sativa Indica Group BGIOSGA026133 R-OSI-5679443 BGIOSGA026133 [nucleoplasm] R-OSI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5679411 Gibberellin signaling none Oryza sativa Indica Group BGIOSGA026133 R-OSI-5679443 BGIOSGA026133 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA026133 R-OSI-6787090 BGIOSGA026133 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA026138 R-OSI-8987499 BGIOSGA026138 [peroxisomal matrix] R-OSI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119312 Photorespiration none Oryza sativa Indica Group BGIOSGA026138 R-OSI-1130222 BGIOSGA026138 [cytosol] R-OSI-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119596 Glutamate biosynthesis I none Oryza sativa Indica Group BGIOSGA026140 R-OSI-1129561 BGIOSGA026140 [cytosol] R-OSI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119452 Galactose degradation II none Oryza sativa Indica Group BGIOSGA026140 R-OSI-1129561 BGIOSGA026140 [cytosol] R-OSI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119465 Sucrose biosynthesis none Oryza sativa Indica Group BGIOSGA026147 R-OSI-1129585 BGIOSGA026147 [cytosol] R-OSI-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119265 Tetrahydrofolate biosynthesis I none Oryza sativa Indica Group BGIOSGA026147 R-OSI-1129585 BGIOSGA026147 [cytosol] R-OSI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119523 Tetrahydrofolate biosynthesis II none Oryza sativa Indica Group BGIOSGA026230 R-OSI-9916134 OsPRX105 [extracellular region] R-OSI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119403 Removal of superoxide radicals none Oryza sativa Indica Group BGIOSGA026230 R-OSI-9916134 OsPRX105 [extracellular region] R-OSI-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9607185 Generation of superoxide radicals none Oryza sativa Indica Group BGIOSGA026237 R-OSI-1130302 BGIOSGA026237 [cytosol] R-OSI-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119451 Xylose degradation none Oryza sativa Indica Group BGIOSGA026315 R-OSI-9611465 BGIOSGA026315 [nucleoplasm] R-OSI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Oryza sativa Indica Group BGIOSGA026315 R-OSI-9611445 BGIOSGA026315 [nucleoplasm] R-OSI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Oryza sativa Indica Group BGIOSGA026421 R-OSI-6787254 BGIOSGA026421 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA026421 R-OSI-6787112 BGIOSGA026421 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA026426 R-OSI-9927865 BGIOSGA026426 [nucleoplasm] R-OSI-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934257 Transition from vegetative to reproductive shoot apical meristem none Oryza sativa Indica Group BGIOSGA026428 R-OSI-6788050 BGIOSGA026428 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA026434 R-OSI-9025758 BGIOSGA026434 [cytosol] R-OSI-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9025754 Mugineic acid biosynthesis none Oryza sativa Indica Group BGIOSGA026439 R-OSI-1124234 BGIOSGA026439 [cytosol] R-OSI-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119436 Peptidoglycan biosynthesis I none Oryza sativa Indica Group BGIOSGA026444 R-OSI-9025290 BGIOSGA026444 [cytosol] R-OSI-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119267 Phenylalanine degradation III none Oryza sativa Indica Group BGIOSGA026444 R-OSI-1127774 BGIOSGA026444 [cytosol] R-OSI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119460 Isoleucine biosynthesis from threonine none Oryza sativa Indica Group BGIOSGA026444 R-OSI-1127774 BGIOSGA026444 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA026444 R-OSI-1127774 BGIOSGA026444 [cytosol] R-OSI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119600 Valine biosynthesis none Oryza sativa Indica Group BGIOSGA026448 R-OSI-1129616 BGIOSGA026448 [cytosol] R-OSI-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119300 Glycolipid desaturation none Oryza sativa Indica Group BGIOSGA026514 R-OSI-5679474 BGIOSGA026514 [nucleoplasm] R-OSI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5679411 Gibberellin signaling none Oryza sativa Indica Group BGIOSGA026515 R-OSI-1127357 BGIOSGA026515 [cytosol] R-OSI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119273 Lysine biosynthesis I none Oryza sativa Indica Group BGIOSGA026515 R-OSI-1127357 BGIOSGA026515 [cytosol] R-OSI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119283 Lysine biosynthesis II none Oryza sativa Indica Group BGIOSGA026526 R-OSI-1123786 BGIOSGA026526 R-OSI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119403 Removal of superoxide radicals none Oryza sativa Indica Group BGIOSGA026573 R-OSI-9640763 BGIOSGA026573 [nucleoplasm] R-OSI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640887 G1/S transition none Oryza sativa Indica Group BGIOSGA026573 R-OSI-9640885 phospho-BGIOSGA026573 [nucleoplasm] R-OSI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640887 G1/S transition none Oryza sativa Indica Group BGIOSGA026590 R-OSI-4827081 BGIOSGA026590 [plastid stroma] R-OSI-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-4827054 Tetrapyrrole biosynthesis I none Oryza sativa Indica Group BGIOSGA026598 R-OSI-8858074 BGIOSGA026598 [plasma membrane] R-OSI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8858053 Polar auxin transport none Oryza sativa Indica Group BGIOSGA026621 R-OSI-1126317-2 BGIOSGA026621 [cytosol] R-OSI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119428 GDP-D-rhamnose biosynthesis none Oryza sativa Indica Group BGIOSGA026621 R-OSI-1126317-2 BGIOSGA026621 [cytosol] R-OSI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Oryza sativa Indica Group BGIOSGA026622 R-OSI-1126317 BGIOSGA026622 [cytosol] R-OSI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119428 GDP-D-rhamnose biosynthesis none Oryza sativa Indica Group BGIOSGA026622 R-OSI-1126317 BGIOSGA026622 [cytosol] R-OSI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Oryza sativa Indica Group BGIOSGA026650 R-OSI-9918265 ISA1 [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA026650 R-OSI-9626527 BGIOSGA026650 [plastid stroma] R-OSI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9626305 Regulatory network of nutrient accumulation none Oryza sativa Indica Group BGIOSGA026705 R-OSI-9030976 BGIOSGA026705 [nucleoplasm] R-OSI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5654828 Strigolactone signaling none Oryza sativa Indica Group BGIOSGA026705 R-OSI-9030976 BGIOSGA026705 [nucleoplasm] R-OSI-9030908 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030908 Underwater shoot and internode elongation none Oryza sativa Indica Group BGIOSGA026705 R-OSI-9030976 BGIOSGA026705 [nucleoplasm] R-OSI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9035605 Regulation of seed size none Oryza sativa Indica Group BGIOSGA026705 R-OSI-9035631 BGIOSGA026705 [cytosol] R-OSI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9035605 Regulation of seed size none Oryza sativa Indica Group BGIOSGA026705 R-OSI-9030976 BGIOSGA026705 [nucleoplasm] R-OSI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9608575 Reproductive meristem phase change none Oryza sativa Indica Group BGIOSGA026705 R-OSI-9035631 BGIOSGA026705 [cytosol] R-OSI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9608575 Reproductive meristem phase change none Oryza sativa Indica Group BGIOSGA026721 R-OSI-8987571 BGIOSGA026721 [peroxisomal matrix] R-OSI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119312 Photorespiration none Oryza sativa Indica Group BGIOSGA026777 R-OSI-1125832 BGIOSGA026777 [plastid stroma] R-OSI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119430 Chorismate biosynthesis none Oryza sativa Indica Group BGIOSGA026799 R-OSI-2960183 BGIOSGA026799 [cytosol] R-OSI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119410 Ascorbate biosynthesis none Oryza sativa Indica Group BGIOSGA026799 R-OSI-2960183 BGIOSGA026799 [cytosol] R-OSI-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119570 Cytosolic glycolysis none Oryza sativa Indica Group BGIOSGA026829 R-OSI-9826683 HSFB4A [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA026831 R-OSI-1127891 BGIOSGA026831 [cytosol] R-OSI-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119586 Cyanate degradation none Oryza sativa Indica Group BGIOSGA026834 R-OSI-1122836 BGIOSGA026834 [cytosol] R-OSI-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119586 Cyanate degradation none Oryza sativa Indica Group BGIOSGA026840 R-OSI-1122966 BGIOSGA026840 [cytosol] R-OSI-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119291 Nitrate assimilation none Oryza sativa Indica Group BGIOSGA026849 R-OSI-1122843 BGIOSGA026849 [cytosol] R-OSI-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119458 Glutamate degradation none Oryza sativa Indica Group BGIOSGA026896 R-OSI-6787004 BGIOSGA026896 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA026896 R-OSI-6786938 BGIOSGA026896 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA026914 R-OSI-1124870 BGIOSGA026914 [cytosol] R-OSI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119438 Secologanin and strictosidine biosynthesis none Oryza sativa Indica Group BGIOSGA026917 R-OSI-1128200 BGIOSGA026917 [cytosol] R-OSI-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119316 Phenylpropanoid biosynthesis none Oryza sativa Indica Group BGIOSGA026918 R-OSI-1123148 BGIOSGA026918 [cytosol] R-OSI-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119300 Glycolipid desaturation none Oryza sativa Indica Group BGIOSGA026944 R-OSI-5632179 BGIOSGA026944 [cytosol] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA026944 R-OSI-5632179 BGIOSGA026944 [cytosol] R-OSI-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934257 Transition from vegetative to reproductive shoot apical meristem none Oryza sativa Indica Group BGIOSGA026944 R-OSI-9927894 BGIOSGA026944 [nucleoplasm] R-OSI-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934257 Transition from vegetative to reproductive shoot apical meristem none Oryza sativa Indica Group BGIOSGA026944 R-OSI-5632179 BGIOSGA026944 [cytosol] R-OSI-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9609102 Flower development none Oryza sativa Indica Group BGIOSGA026944 R-OSI-5632179 BGIOSGA026944 [cytosol] R-OSI-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9928831 Severe drought none Oryza sativa Indica Group BGIOSGA026944 R-OSI-9927894 BGIOSGA026944 [nucleoplasm] R-OSI-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9928831 Severe drought none Oryza sativa Indica Group BGIOSGA026952 R-OSI-6787007 BGIOSGA026952 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA026952 R-OSI-6787147 BGIOSGA026952 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA026952 R-OSI-9826596 OSJAZ3 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA027059 R-OSI-1126715 BGIOSGA027059 [cytosol] R-OSI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119452 Galactose degradation II none Oryza sativa Indica Group BGIOSGA027135 R-OSI-1122818 BGIOSGA027135 [cytosol] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA027136 R-OSI-1127820 BGIOSGA027136 [plasma membrane] R-OSI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119314 Cellulose biosynthesis none Oryza sativa Indica Group BGIOSGA027143 R-OSI-1125926 BGIOSGA027143 [cytosol] R-OSI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119273 Lysine biosynthesis I none Oryza sativa Indica Group BGIOSGA027143 R-OSI-1125926 BGIOSGA027143 [cytosol] R-OSI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119283 Lysine biosynthesis II none Oryza sativa Indica Group BGIOSGA027143 R-OSI-1125926 BGIOSGA027143 [cytosol] R-OSI-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119295 Homoserine biosynthesis none Oryza sativa Indica Group BGIOSGA027143 R-OSI-5606498 BGIOSGA027143 [plastid stroma] R-OSI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119419 Lysine biosynthesis VI none Oryza sativa Indica Group BGIOSGA027158 R-OSI-1123609 BGIOSGA027158 [plasma membrane] R-OSI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119314 Cellulose biosynthesis none Oryza sativa Indica Group BGIOSGA027197 R-OSI-1125612 BGIOSGA027197 [cytosol] R-OSI-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119353 Linear furanocoumarin biosynthesis none Oryza sativa Indica Group BGIOSGA027368 R-OSI-1128906 BGIOSGA027368 [cytosol] R-OSI-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119444 Canavanine biosynthesis none Oryza sativa Indica Group BGIOSGA027374 R-OSI-1124048 BGIOSGA027374 [cytosol] R-OSI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119610 Biotin biosynthesis II none Oryza sativa Indica Group BGIOSGA027401 R-OSI-1126813 BGIOSGA027401 [cytosol] R-OSI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119410 Ascorbate biosynthesis none Oryza sativa Indica Group BGIOSGA027464 R-OSI-9026139 BGIOSGA027464 [mitochondrion] R-OSI-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119458 Glutamate degradation none Oryza sativa Indica Group BGIOSGA027464 R-OSI-1130288 BGIOSGA027464 [cytosol] R-OSI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119610 Biotin biosynthesis II none Oryza sativa Indica Group BGIOSGA027569 R-OSI-8934251 BGIOSGA027569 [nucleoplasm] R-OSI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934036 Long day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA027569 R-OSI-8934251 BGIOSGA027569 [nucleoplasm] R-OSI-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934108 Short day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA027606 R-OSI-8854452 BGIOSGA027606 [cytosol] R-OSI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119276 Choline biosynthesis III none Oryza sativa Indica Group BGIOSGA027623 R-OSI-6788261 BGIOSGA027623 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA027626 R-OSI-9609608 BGIOSGA027626 [cytosol] R-OSI-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9609573 Tricin biosynthesis none Oryza sativa Indica Group BGIOSGA027626 R-OSI-9916171 OsOMT [cytosol] R-OSI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9916190 Root angle formation: elongation and curvature response none Oryza sativa Indica Group BGIOSGA027626 R-OSI-9916312 OsOMT [nucleoplasm] R-OSI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9916190 Root angle formation: elongation and curvature response none Oryza sativa Indica Group BGIOSGA027639 R-OSI-5608126 BGIOSGA027639 [plasma membrane] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA027681 R-OSI-1130189 BGIOSGA027681 [cytosol] R-OSI-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Oryza sativa Indica Group BGIOSGA027681 R-OSI-1130189 BGIOSGA027681 [cytosol] R-OSI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119438 Secologanin and strictosidine biosynthesis none Oryza sativa Indica Group BGIOSGA027681 R-OSI-1130189 BGIOSGA027681 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA027739 R-OSI-5149681 BGIOSGA027739 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA027739 R-OSI-1122616 BGIOSGA027739 [cytosol] R-OSI-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119570 Cytosolic glycolysis none Oryza sativa Indica Group BGIOSGA027742 R-OSI-1122601 BGIOSGA027742 [mitochondrial inner membrane] R-OSI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119533 TCA cycle (plant) none Oryza sativa Indica Group BGIOSGA027795 R-OSI-8934208 BGIOSGA027795 [nucleoplasm] R-OSI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934036 Long day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA027858 R-OSI-5608123 BGIOSGA027858 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA027913 R-OSI-1122785 BGIOSGA027913 [cytosol] R-OSI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119273 Lysine biosynthesis I none Oryza sativa Indica Group BGIOSGA027913 R-OSI-1122785 BGIOSGA027913 [cytosol] R-OSI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119283 Lysine biosynthesis II none Oryza sativa Indica Group BGIOSGA027913 R-OSI-1122785 BGIOSGA027913 [cytosol] R-OSI-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119570 Cytosolic glycolysis none Oryza sativa Indica Group BGIOSGA027930 R-OSI-1127743 BGIOSGA027930 [cytosol] R-OSI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119428 GDP-D-rhamnose biosynthesis none Oryza sativa Indica Group BGIOSGA027930 R-OSI-9681930 BGIOSGA027930 [Golgi membrane] R-OSI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119574 UDP-L-arabinose biosynthesis and transport none Oryza sativa Indica Group BGIOSGA027930 R-OSI-1127743 BGIOSGA027930 [cytosol] R-OSI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Oryza sativa Indica Group BGIOSGA027932 R-OSI-1122605 BGIOSGA027932 [cytosol] R-OSI-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119341 Galactosylcyclitol biosynthesis none Oryza sativa Indica Group BGIOSGA027951 R-OSI-1129867 BGIOSGA027951 [chloroplast] R-OSI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119494 Tryptophan biosynthesis none Oryza sativa Indica Group BGIOSGA027967 R-OSI-1123150 BGIOSGA027967 [cytosol] R-OSI-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Oryza sativa Indica Group BGIOSGA027967 R-OSI-1123150 BGIOSGA027967 [cytosol] R-OSI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119438 Secologanin and strictosidine biosynthesis none Oryza sativa Indica Group BGIOSGA027967 R-OSI-1123150 BGIOSGA027967 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA027996 R-OSI-9618135 BGIOSGA027996 [plasma membrane] R-OSI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9618218 Arsenic uptake and detoxification none Oryza sativa Indica Group BGIOSGA027997 R-OSI-9618073 BGIOSGA027997 [plasma membrane] R-OSI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9618218 Arsenic uptake and detoxification none Oryza sativa Indica Group BGIOSGA028006 R-OSI-9675426 BGIOSGA028006 [nucleoplasm] R-OSI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030654 Primary root development none Oryza sativa Indica Group BGIOSGA028019 R-OSI-8933759 BGIOSGA028019 [nucleoplasm] R-OSI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8933811 Circadian rhythm none Oryza sativa Indica Group BGIOSGA028033 R-OSI-5632174 BGIOSGA028033 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA028033 R-OSI-5632174 BGIOSGA028033 [nucleoplasm] R-OSI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5654828 Strigolactone signaling none Oryza sativa Indica Group BGIOSGA028033 R-OSI-5632174 BGIOSGA028033 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA028033 R-OSI-5632174 BGIOSGA028033 [nucleoplasm] R-OSI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9608575 Reproductive meristem phase change none Oryza sativa Indica Group BGIOSGA028067 R-OSI-1127597-2 BGIOSGA028067 [cytosol] R-OSI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119615 Mevalonate pathway none Oryza sativa Indica Group BGIOSGA028079 R-OSI-1127257 BGIOSGA028079 [cytosol] R-OSI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119438 Secologanin and strictosidine biosynthesis none Oryza sativa Indica Group BGIOSGA028103 R-OSI-9918175 BGIOSGA028103 [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA028120 R-OSI-8868990 BGIOSGA028120 [endoplasmic reticulum membrane] R-OSI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8868949 Intracellular auxin transport none Oryza sativa Indica Group BGIOSGA028122 R-OSI-9918268 soluble Starch Synthase (SSIIIA/SSIII-2) [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA028277 R-OSI-1125406 BGIOSGA028277 [cytosol] R-OSI-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119418 Suberin biosynthesis none Oryza sativa Indica Group BGIOSGA028425 R-OSI-1127574 BGIOSGA028425 [cytosol] R-OSI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119465 Sucrose biosynthesis none Oryza sativa Indica Group BGIOSGA028475 R-OSI-5655100 BGIOSGA028475 [Golgi lumen] R-OSI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5655101 Xyloglucan biosynthesis none Oryza sativa Indica Group BGIOSGA028498 R-OSI-6787185 BGIOSGA028498 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA028635 R-OSI-1124866 BGIOSGA028635 [cytosol] R-OSI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119473 Cytokinins-O-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA028637 R-OSI-1129697 BGIOSGA028637 [cytosol] R-OSI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119473 Cytokinins-O-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA028654 R-OSI-6787193 BGIOSGA028654 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA028654 R-OSI-6786897 BGIOSGA028654 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA028695 R-OSI-1124999 BGIOSGA028695 [cytosol] R-OSI-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119586 Cyanate degradation none Oryza sativa Indica Group BGIOSGA028697 R-OSI-1129514 BGIOSGA028697 [chloroplast] R-OSI-1119579 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119579 Glycine betaine biosynthesis III none Oryza sativa Indica Group BGIOSGA028717 R-OSI-9924522 BGIOSGA028717 [nucleoplasm] R-OSI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924451 Shoot (tiller) formation and regulation of tiller angle none Oryza sativa Indica Group BGIOSGA028718 R-OSI-1126826 BGIOSGA028718 [cytosol] R-OSI-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119304 Putrescine biosynthesis II none Oryza sativa Indica Group BGIOSGA028718 R-OSI-1126826 BGIOSGA028718 [cytosol] R-OSI-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119447 Putrescine biosynthesis I none Oryza sativa Indica Group BGIOSGA028747 R-OSI-1124231 BGIOSGA028747 [cytosol] R-OSI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119389 Phenylalanine biosynthesis I none Oryza sativa Indica Group BGIOSGA028797 R-OSI-1130153 BGIOSGA028797 [cytosol] R-OSI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119332 Jasmonic acid biosynthesis none Oryza sativa Indica Group BGIOSGA028797 R-OSI-6787115 BGIOSGA028797 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA028800 R-OSI-9826663 OsBRXL4 [plasma membrane] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA028800 R-OSI-9826665 OsBRXL4 [cytosol] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA028800 R-OSI-9826663 OsBRXL4 [plasma membrane] R-OSI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924451 Shoot (tiller) formation and regulation of tiller angle none Oryza sativa Indica Group BGIOSGA028800 R-OSI-9826665 OsBRXL4 [cytosol] R-OSI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924451 Shoot (tiller) formation and regulation of tiller angle none Oryza sativa Indica Group BGIOSGA028821 R-OSI-1127880 BGIOSGA028821 [cytosol] R-OSI-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119291 Nitrate assimilation none Oryza sativa Indica Group BGIOSGA028859 R-OSI-9640676 BGIOSGA028859 [nucleoplasm] R-OSI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640760 G1 phase none Oryza sativa Indica Group BGIOSGA028859 R-OSI-9640676 BGIOSGA028859 [nucleoplasm] R-OSI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640887 G1/S transition none Oryza sativa Indica Group BGIOSGA028862 R-OSI-5632192 BGIOSGA028862 [cytosol] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA028923 R-OSI-8986638 BGIOSGA028923 [COPII-coated ER to Golgi transport vesicle] R-OSI-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8986768 Anther and pollen development none Oryza sativa Indica Group BGIOSGA028941 R-OSI-1123741 BGIOSGA028941 [cytosol] R-OSI-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119265 Tetrahydrofolate biosynthesis I none Oryza sativa Indica Group BGIOSGA028967 R-OSI-1126976 BGIOSGA028967 [cytosol] R-OSI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119332 Jasmonic acid biosynthesis none Oryza sativa Indica Group BGIOSGA028967 R-OSI-1126976 BGIOSGA028967 [cytosol] R-OSI-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119618 13-LOX and 13-HPL pathway none Oryza sativa Indica Group BGIOSGA028970 R-OSI-1126107 BGIOSGA028970 [cytosol] R-OSI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119332 Jasmonic acid biosynthesis none Oryza sativa Indica Group BGIOSGA028970 R-OSI-1126107 BGIOSGA028970 [cytosol] R-OSI-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119618 13-LOX and 13-HPL pathway none Oryza sativa Indica Group BGIOSGA028986 R-OSI-1124496 BGIOSGA028986 [cytosol] R-OSI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119615 Mevalonate pathway none Oryza sativa Indica Group BGIOSGA029043 R-OSI-1124056 BGIOSGA029043 [cytosol] R-OSI-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119394 Pantothenate and coenzyme A biosynthesis III none Oryza sativa Indica Group BGIOSGA029051 R-OSI-9035600 BGIOSGA029051 [cytosol] R-OSI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9035605 Regulation of seed size none Oryza sativa Indica Group BGIOSGA029051 R-OSI-9035669 BGIOSGA029051 [nucleoplasm] R-OSI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9035605 Regulation of seed size none Oryza sativa Indica Group BGIOSGA029074 R-OSI-9611549 phospho-phosphorylated-CERK1 [plasma membrane] R-OSI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Oryza sativa Indica Group BGIOSGA029074 R-OSI-9611466 CERK1 [plasma membrane] R-OSI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Oryza sativa Indica Group BGIOSGA029084 R-OSI-1124791 BGIOSGA029084 [cytosol] R-OSI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119610 Biotin biosynthesis II none Oryza sativa Indica Group BGIOSGA029108 R-OSI-1130277 BGIOSGA029108 [cytosol] R-OSI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119615 Mevalonate pathway none Oryza sativa Indica Group BGIOSGA029169 R-OSI-1127625 BGIOSGA029169 [cytosol] R-OSI-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119265 Tetrahydrofolate biosynthesis I none Oryza sativa Indica Group BGIOSGA029169 R-OSI-1127625 BGIOSGA029169 [cytosol] R-OSI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119523 Tetrahydrofolate biosynthesis II none Oryza sativa Indica Group BGIOSGA029191 R-OSI-1127733 BGIOSGA029191 [cytosol] R-OSI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119460 Isoleucine biosynthesis from threonine none Oryza sativa Indica Group BGIOSGA029191 R-OSI-1127733 BGIOSGA029191 [cytosol] R-OSI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119600 Valine biosynthesis none Oryza sativa Indica Group BGIOSGA029200 R-OSI-8868961 BGIOSGA029200 [plant-type vacuole membrane] R-OSI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8868949 Intracellular auxin transport none Oryza sativa Indica Group BGIOSGA029201 R-OSI-1126828 BGIOSGA029201 [plastid] R-OSI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119403 Removal of superoxide radicals none Oryza sativa Indica Group BGIOSGA029292 R-OSI-5679404 BGIOSGA029292 [nucleoplasm] R-OSI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5679411 Gibberellin signaling none Oryza sativa Indica Group BGIOSGA029334 R-OSI-9924417 SAUR39 [cytosol] R-OSI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924451 Shoot (tiller) formation and regulation of tiller angle none Oryza sativa Indica Group BGIOSGA029359 R-OSI-1126440 BGIOSGA029359 [plastid stroma] R-OSI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119430 Chorismate biosynthesis none Oryza sativa Indica Group BGIOSGA029371 R-OSI-1128877 BGIOSGA029371 [plastid stroma] R-OSI-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119424 Plastid glycolysis none Oryza sativa Indica Group BGIOSGA029371 R-OSI-1128877 BGIOSGA029371 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA029381 R-OSI-8933784 BGIOSGA029381 [nucleoplasm] R-OSI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8933811 Circadian rhythm none Oryza sativa Indica Group BGIOSGA029394 R-OSI-9924533 TAC1 [nucleoplasm] R-OSI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924451 Shoot (tiller) formation and regulation of tiller angle none Oryza sativa Indica Group BGIOSGA029401 R-OSI-1130394 BGIOSGA029401 [cytosol] R-OSI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119452 Galactose degradation II none Oryza sativa Indica Group BGIOSGA029402 R-OSI-1130394-2 BGIOSGA029402 [cytosol] R-OSI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119452 Galactose degradation II none Oryza sativa Indica Group BGIOSGA029415 R-OSI-9766868 DREB1A [nucleoplasm] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA029425 R-OSI-9675866 BGIOSGA029425 [nucleoplasm] R-OSI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675782 Maturation none Oryza sativa Indica Group BGIOSGA029425 R-OSI-9675866 BGIOSGA029425 [nucleoplasm] R-OSI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675815 Leading strand synthesis none Oryza sativa Indica Group BGIOSGA029425 R-OSI-9675866 BGIOSGA029425 [nucleoplasm] R-OSI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675885 Lagging strand synthesis none Oryza sativa Indica Group BGIOSGA029426 R-OSI-6786926 BGIOSGA029426 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA029429 R-OSI-9639010 BGIOSGA029429 [cytosol] R-OSI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119434 Phytic acid biosynthesis (lipid-independent) none Oryza sativa Indica Group BGIOSGA029477 R-OSI-8858081 BGIOSGA029477 [plasma membrane] R-OSI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8858053 Polar auxin transport none Oryza sativa Indica Group BGIOSGA029486 R-OSI-1129921 BGIOSGA029486 [cytosol] R-OSI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119428 GDP-D-rhamnose biosynthesis none Oryza sativa Indica Group BGIOSGA029486 R-OSI-1129921 BGIOSGA029486 [cytosol] R-OSI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Oryza sativa Indica Group BGIOSGA029533 R-OSI-8868866 BGIOSGA029533 [endoplasmic reticulum membrane] R-OSI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8868949 Intracellular auxin transport none Oryza sativa Indica Group BGIOSGA029541 R-OSI-9608743 BGIOSGA029541 [cytosol] R-OSI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9608575 Reproductive meristem phase change none Oryza sativa Indica Group BGIOSGA029541 R-OSI-9608705 BGIOSGA029541 [nucleoplasm] R-OSI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9608575 Reproductive meristem phase change none Oryza sativa Indica Group BGIOSGA029545 R-OSI-6786917 BGIOSGA029545 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA029549 R-OSI-2960790 BGIOSGA029549 [cytosol] R-OSI-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119386 UDP-N-acetylgalactosamine biosynthesis none Oryza sativa Indica Group BGIOSGA029549 R-OSI-2960790 BGIOSGA029549 [cytosol] R-OSI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030654 Primary root development none Oryza sativa Indica Group BGIOSGA029619 R-OSI-2960195 BGIOSGA029619 [cytosol] R-OSI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119410 Ascorbate biosynthesis none Oryza sativa Indica Group BGIOSGA029619 R-OSI-2960195 BGIOSGA029619 [cytosol] R-OSI-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119570 Cytosolic glycolysis none Oryza sativa Indica Group BGIOSGA029624 R-OSI-1128980 BGIOSGA029624 [cytosol] R-OSI-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119586 Cyanate degradation none Oryza sativa Indica Group BGIOSGA029634 R-OSI-5655083 BGIOSGA029634 [Golgi lumen] R-OSI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5655101 Xyloglucan biosynthesis none Oryza sativa Indica Group BGIOSGA029635 R-OSI-1126380 BGIOSGA029635 [cytosol] R-OSI-1119609 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119609 Phaseic acid biosynthesis none Oryza sativa Indica Group BGIOSGA029643 R-OSI-1122877 BGIOSGA029643 [cytosol] R-OSI-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119586 Cyanate degradation none Oryza sativa Indica Group BGIOSGA029652 R-OSI-1123097 BGIOSGA029652 [cytosol] R-OSI-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119341 Galactosylcyclitol biosynthesis none Oryza sativa Indica Group BGIOSGA029686 R-OSI-1124813 BGIOSGA029686 [mitochondrial matrix] R-OSI-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119337 Proline degradation none Oryza sativa Indica Group BGIOSGA029686 R-OSI-8986570 BGIOSGA029686 [mitochondrial matrix] R-OSI-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119365 Lysine degradation II none Oryza sativa Indica Group BGIOSGA029686 R-OSI-9658682 BGIOSGA029686 [cytosol] R-OSI-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119567 Beta-alanine biosynthesis I none Oryza sativa Indica Group BGIOSGA029689 R-OSI-5679378 BGIOSGA029689 [nucleoplasm] R-OSI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5679411 Gibberellin signaling none Oryza sativa Indica Group BGIOSGA029689 R-OSI-5679378 BGIOSGA029689 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA029689 R-OSI-6787094 BGIOSGA029689 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA029689 R-OSI-5679378 BGIOSGA029689 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA029748 R-OSI-1124786 BGIOSGA029748 [cytosol] R-OSI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119276 Choline biosynthesis III none Oryza sativa Indica Group BGIOSGA029755 R-OSI-1125953 BGIOSGA029755 [cytosol] R-OSI-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119316 Phenylpropanoid biosynthesis none Oryza sativa Indica Group BGIOSGA029757 R-OSI-6787948 BGIOSGA029757 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA029758 R-OSI-6787876 BGIOSGA029758 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA029789 R-OSI-2730728 BGIOSGA029789 [cytosol] R-OSI-1119413 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119413 Trans-zeatin biosynthesis none Oryza sativa Indica Group BGIOSGA029796 R-OSI-6786969 BGIOSGA029796 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA029796 R-OSI-6787121 BGIOSGA029796 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA029796 R-OSI-6786969 BGIOSGA029796 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA029843 R-OSI-9640729 BGIOSGA029843 [nucleoplasm] R-OSI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640760 G1 phase none Oryza sativa Indica Group BGIOSGA029843 R-OSI-9640729 BGIOSGA029843 [nucleoplasm] R-OSI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640887 G1/S transition none Oryza sativa Indica Group BGIOSGA029866 R-OSI-1125638 BGIOSGA029866 [cytosol] R-OSI-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119516 Trehalose biosynthesis I none Oryza sativa Indica Group BGIOSGA029883 R-OSI-1123096 BGIOSGA029883 [mitochondrial inner membrane] R-OSI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119533 TCA cycle (plant) none Oryza sativa Indica Group BGIOSGA029888 R-OSI-9658681 BGIOSGA029888 [plasma membrane] R-OSI-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119567 Beta-alanine biosynthesis I none Oryza sativa Indica Group BGIOSGA029897 R-OSI-6787045 BGIOSGA029897 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA029897 R-OSI-6786951 BGIOSGA029897 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA029990 R-OSI-1122936 BGIOSGA029990 [cytosol] R-OSI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119452 Galactose degradation II none Oryza sativa Indica Group BGIOSGA030026 R-OSI-9608930 BGIOSGA030026 [nucleoplasm] R-OSI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934036 Long day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA030039 R-OSI-1127443 BGIOSGA030039 [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA030051 R-OSI-1123557 BGIOSGA030051 [cytosol] R-OSI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119273 Lysine biosynthesis I none Oryza sativa Indica Group BGIOSGA030051 R-OSI-1123557 BGIOSGA030051 [cytosol] R-OSI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119283 Lysine biosynthesis II none Oryza sativa Indica Group BGIOSGA030051 R-OSI-1123557 BGIOSGA030051 [cytosol] R-OSI-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119295 Homoserine biosynthesis none Oryza sativa Indica Group BGIOSGA030051 R-OSI-5606479 BGIOSGA030051 [plastid stroma] R-OSI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119419 Lysine biosynthesis VI none Oryza sativa Indica Group BGIOSGA030065 R-OSI-9030816 BGIOSGA030065 [nucleoplasm] R-OSI-9030908 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030908 Underwater shoot and internode elongation none Oryza sativa Indica Group BGIOSGA030128 R-OSI-1127491 BGIOSGA030128 [chloroplast] R-OSI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119312 Photorespiration none Oryza sativa Indica Group BGIOSGA030146 R-OSI-1123161 BGIOSGA030146 [chloroplast] R-OSI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119494 Tryptophan biosynthesis none Oryza sativa Indica Group BGIOSGA030183 R-OSI-9927723 BGIOSGA030183 [nucleoplasm] R-OSI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934036 Long day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA030236 R-OSI-9640671 BGIOSGA030236 [nucleoplasm] R-OSI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640760 G1 phase none Oryza sativa Indica Group BGIOSGA030236 R-OSI-9640671 BGIOSGA030236 [nucleoplasm] R-OSI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640887 G1/S transition none Oryza sativa Indica Group BGIOSGA030366 R-OSI-1126998 BGIOSGA030366 [cytosol] R-OSI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119615 Mevalonate pathway none Oryza sativa Indica Group BGIOSGA030440 R-OSI-5632251 BGIOSGA030440 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA030517 R-OSI-4415015 BGIOSGA030517 [cytosol] R-OSI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-3899351 Abscisic acid (ABA) mediated signaling none Oryza sativa Indica Group BGIOSGA030535 R-OSI-9826647 BGIOSGA030535 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA030542 R-OSI-5083827 BGIOSGA030542 [mitochondrial matrix] R-OSI-1119319 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119319 Alanine biosynthesis III none Oryza sativa Indica Group BGIOSGA030542 R-OSI-5083827 BGIOSGA030542 [mitochondrial matrix] R-OSI-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119612 Cysteine degradation none Oryza sativa Indica Group BGIOSGA030593 R-OSI-4752546 BGIOSGA030593 [plastid stroma] R-OSI-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119498 Phylloquinone biosynthesis none Oryza sativa Indica Group BGIOSGA030594 R-OSI-6787276 BGIOSGA030594 [plastid stroma] R-OSI-1119261 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119261 Salicylate biosynthesis none Oryza sativa Indica Group BGIOSGA030594 R-OSI-6787950 BGIOSGA030594 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA030630 R-OSI-6786947 BGIOSGA030630 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA030649 R-OSI-1129438 BGIOSGA030649 [cytosol] R-OSI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119438 Secologanin and strictosidine biosynthesis none Oryza sativa Indica Group BGIOSGA030701 R-OSI-6788036 BGIOSGA030701 [cytosol] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA030701 R-OSI-1126611 BGIOSGA030701 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA030715 R-OSI-1128160 BGIOSGA030715 [cytosol] R-OSI-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119516 Trehalose biosynthesis I none Oryza sativa Indica Group BGIOSGA030777 R-OSI-1124334 BGIOSGA030777 [plasma membrane] R-OSI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119314 Cellulose biosynthesis none Oryza sativa Indica Group BGIOSGA030796 R-OSI-1122343 BGIOSGA030796 [cytosol] R-OSI-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119516 Trehalose biosynthesis I none Oryza sativa Indica Group BGIOSGA030829 R-OSI-9607102 BGIOSGA030829 [mitochondrion] R-OSI-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9607185 Generation of superoxide radicals none Oryza sativa Indica Group BGIOSGA030831 R-OSI-8854102 BGIOSGA030831 [cytosol] R-OSI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119556 Choline biosynthesis I none Oryza sativa Indica Group BGIOSGA030843 R-OSI-9035772 BGIOSGA030843 [cytosol] R-OSI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9035605 Regulation of seed size none Oryza sativa Indica Group BGIOSGA030864 R-OSI-1126542 BGIOSGA030864 [cytosol] R-OSI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119523 Tetrahydrofolate biosynthesis II none Oryza sativa Indica Group BGIOSGA030864 R-OSI-1126542 BGIOSGA030864 [cytosol] R-OSI-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119617 Folate polyglutamylation I none Oryza sativa Indica Group BGIOSGA030879 R-OSI-1122827 BGIOSGA030879 [cytosol] R-OSI-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119334 Ethylene biosynthesis from methionine none Oryza sativa Indica Group BGIOSGA030883 R-OSI-9611489 LYP4 [plasma membrane] R-OSI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Oryza sativa Indica Group BGIOSGA030930 R-OSI-9640777 BGIOSGA030930 [nucleoplasm] R-OSI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640760 G1 phase none Oryza sativa Indica Group BGIOSGA030930 R-OSI-9640777 BGIOSGA030930 [nucleoplasm] R-OSI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640887 G1/S transition none Oryza sativa Indica Group BGIOSGA030958 R-OSI-5632199 BGIOSGA030958 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA031013 R-OSI-1125142 BGIOSGA031013 [cytosol] R-OSI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119615 Mevalonate pathway none Oryza sativa Indica Group BGIOSGA031047 R-OSI-1124905 BGIOSGA031047 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA031048 R-OSI-1124138 BGIOSGA031048 [cytosol] R-OSI-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119394 Pantothenate and coenzyme A biosynthesis III none Oryza sativa Indica Group BGIOSGA031086 R-OSI-1129136 BGIOSGA031086 [plastid stroma] R-OSI-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Oryza sativa Indica Group BGIOSGA031111 R-OSI-1122362 BGIOSGA031111 [cytosol] R-OSI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119615 Mevalonate pathway none Oryza sativa Indica Group BGIOSGA031144 R-OSI-1127502 BGIOSGA031144 [cytosol] R-OSI-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119394 Pantothenate and coenzyme A biosynthesis III none Oryza sativa Indica Group BGIOSGA031173 R-OSI-9645954 BGIOSGA031173 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA031176 R-OSI-9927863 phospho-BGIOSGA031176 [nucleoplasm] R-OSI-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934257 Transition from vegetative to reproductive shoot apical meristem none Oryza sativa Indica Group BGIOSGA031176 R-OSI-9927884 BGIOSGA031176 [nucleoplasm] R-OSI-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934257 Transition from vegetative to reproductive shoot apical meristem none Oryza sativa Indica Group BGIOSGA031176 R-OSI-9927863 phospho-BGIOSGA031176 [nucleoplasm] R-OSI-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9928831 Severe drought none Oryza sativa Indica Group BGIOSGA031177 R-OSI-9618156 BGIOSGA031177 [plasma membrane] R-OSI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9618218 Arsenic uptake and detoxification none Oryza sativa Indica Group BGIOSGA031184 R-OSI-1129187 BGIOSGA031184 [cytosol] R-OSI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119276 Choline biosynthesis III none Oryza sativa Indica Group BGIOSGA031231 R-OSI-1124095 BGIOSGA031231 [cytosol] R-OSI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119452 Galactose degradation II none Oryza sativa Indica Group BGIOSGA031233 R-OSI-1123525 BGIOSGA031233 [cytosol] R-OSI-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119384 NAD biosynthesis I (from aspartate) none Oryza sativa Indica Group BGIOSGA031237 R-OSI-8868994 BGIOSGA031237 [endoplasmic reticulum membrane] R-OSI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8868949 Intracellular auxin transport none Oryza sativa Indica Group BGIOSGA031238 R-OSI-8868921 BGIOSGA031238 [endoplasmic reticulum membrane] R-OSI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8868949 Intracellular auxin transport none Oryza sativa Indica Group BGIOSGA031282 R-OSI-1125487 BGIOSGA031282 [cytosol] R-OSI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119370 Sterol biosynthesis none Oryza sativa Indica Group BGIOSGA031283 R-OSI-1123395 BGIOSGA031283 [cytosol] R-OSI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119389 Phenylalanine biosynthesis I none Oryza sativa Indica Group BGIOSGA031285 R-OSI-1129481 BGIOSGA031285 [cytosol] R-OSI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119389 Phenylalanine biosynthesis I none Oryza sativa Indica Group BGIOSGA031313 R-OSI-6787144 BGIOSGA031313 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA031328 R-OSI-8854448 BGIOSGA031328 [cytosol] R-OSI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119276 Choline biosynthesis III none Oryza sativa Indica Group BGIOSGA031340 R-OSI-9638999 BGIOSGA031340 [cytosol] R-OSI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119434 Phytic acid biosynthesis (lipid-independent) none Oryza sativa Indica Group BGIOSGA031382 R-OSI-1124078 BGIOSGA031382 [plastid stroma] R-OSI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119430 Chorismate biosynthesis none Oryza sativa Indica Group BGIOSGA031387 R-OSI-1128380 BGIOSGA031387 [plastid stroma] R-OSI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119430 Chorismate biosynthesis none Oryza sativa Indica Group BGIOSGA031437 R-OSI-1125569 BGIOSGA031437 [cytosol] R-OSI-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119516 Trehalose biosynthesis I none Oryza sativa Indica Group BGIOSGA031438 R-OSI-1128054 BGIOSGA031438 [mitochondrial matrix] R-OSI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119479 Valine degradation none Oryza sativa Indica Group BGIOSGA031454 R-OSI-1122593 BGIOSGA031454 [cytosol] R-OSI-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119436 Peptidoglycan biosynthesis I none Oryza sativa Indica Group BGIOSGA031454 R-OSI-1122593 BGIOSGA031454 [cytosol] R-OSI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119523 Tetrahydrofolate biosynthesis II none Oryza sativa Indica Group BGIOSGA031454 R-OSI-1122593 BGIOSGA031454 [cytosol] R-OSI-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119617 Folate polyglutamylation I none Oryza sativa Indica Group BGIOSGA031502 R-OSI-1129488 BGIOSGA031502 [cytosol] R-OSI-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119394 Pantothenate and coenzyme A biosynthesis III none Oryza sativa Indica Group BGIOSGA031524 R-OSI-1122830 BGIOSGA031524 [cytosol] R-OSI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119276 Choline biosynthesis III none Oryza sativa Indica Group BGIOSGA031527 R-OSI-1127490 BGIOSGA031527 [cytosol] R-OSI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119389 Phenylalanine biosynthesis I none Oryza sativa Indica Group BGIOSGA031535 R-OSI-1124788 BGIOSGA031535 [cytosol] R-OSI-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119601 Trehalose degradation II none Oryza sativa Indica Group BGIOSGA031561 R-OSI-9618171 BGIOSGA031561 [plasma membrane] R-OSI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9618218 Arsenic uptake and detoxification none Oryza sativa Indica Group BGIOSGA031565 R-OSI-1128613 BGIOSGA031565 [cytosol] R-OSI-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119316 Phenylpropanoid biosynthesis none Oryza sativa Indica Group BGIOSGA031600 R-OSI-1125928 BGIOSGA031600 [cytosol] R-OSI-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119484 Folate polyglutamylation II none Oryza sativa Indica Group BGIOSGA031600 R-OSI-1125928 BGIOSGA031600 [cytosol] R-OSI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119523 Tetrahydrofolate biosynthesis II none Oryza sativa Indica Group BGIOSGA031600 R-OSI-1125928 BGIOSGA031600 [cytosol] R-OSI-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119617 Folate polyglutamylation I none Oryza sativa Indica Group BGIOSGA031623 R-OSI-1123250 BGIOSGA031623 [cytosol] R-OSI-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119265 Tetrahydrofolate biosynthesis I none Oryza sativa Indica Group BGIOSGA031623 R-OSI-1123250 BGIOSGA031623 [cytosol] R-OSI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119523 Tetrahydrofolate biosynthesis II none Oryza sativa Indica Group BGIOSGA031653 R-OSI-9675845 BGIOSGA031653 [nucleoplasm] R-OSI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675782 Maturation none Oryza sativa Indica Group BGIOSGA031706 R-OSI-9640789 BGIOSGA031706 [nucleoplasm] R-OSI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640760 G1 phase none Oryza sativa Indica Group BGIOSGA031740 R-OSI-1129569 BGIOSGA031740 [cytosol] R-OSI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119379 Flavin biosynthesis none Oryza sativa Indica Group BGIOSGA031750 R-OSI-8934186 BGIOSGA031750 [nucleoplasm] R-OSI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934036 Long day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA031750 R-OSI-8934186 BGIOSGA031750 [nucleoplasm] R-OSI-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934108 Short day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA031750 R-OSI-9920278 phospho-BGIOSGA031750 [nucleoplasm] R-OSI-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934108 Short day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA031750 R-OSI-8934186 BGIOSGA031750 [nucleoplasm] R-OSI-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9928831 Severe drought none Oryza sativa Indica Group BGIOSGA031750 R-OSI-8934186 BGIOSGA031750 [nucleoplasm] R-OSI-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9928946 Drought escape (DE) via ABA-independent pathway none Oryza sativa Indica Group BGIOSGA031750 R-OSI-8934186 BGIOSGA031750 [nucleoplasm] R-OSI-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9928995 Drought escape (DE) via ABA-dependent pathway none Oryza sativa Indica Group BGIOSGA031779 R-OSI-9826654 BGIOSGA031779 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA031825 R-OSI-9031256 BGIOSGA031825 [endoplasmic reticulum lumen] R-OSI-9031225 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9031225 Response to phosphate deficiency none Oryza sativa Indica Group BGIOSGA031825 R-OSI-9031289 BGIOSGA031825 [plasma membrane] R-OSI-9031225 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9031225 Response to phosphate deficiency none Oryza sativa Indica Group BGIOSGA031825 R-OSI-9031289 BGIOSGA031825 [plasma membrane] R-OSI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9618218 Arsenic uptake and detoxification none Oryza sativa Indica Group BGIOSGA031841 R-OSI-9640698 BGIOSGA031841 [nucleoplasm] R-OSI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640887 G1/S transition none Oryza sativa Indica Group BGIOSGA031911 R-OSI-8934084 BGIOSGA031911 [nucleoplasm] R-OSI-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9928995 Drought escape (DE) via ABA-dependent pathway none Oryza sativa Indica Group BGIOSGA031968 R-OSI-1124291 BGIOSGA031968 [cytosol] R-OSI-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Oryza sativa Indica Group BGIOSGA031968 R-OSI-1124291 BGIOSGA031968 [cytosol] R-OSI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119438 Secologanin and strictosidine biosynthesis none Oryza sativa Indica Group BGIOSGA031968 R-OSI-1124291 BGIOSGA031968 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA031997 R-OSI-6787079 BGIOSGA031997 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA031997 R-OSI-6787114 BGIOSGA031997 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA031997 R-OSI-6787079 BGIOSGA031997 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA032002 R-OSI-6787200 BGIOSGA032002 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA032002 R-OSI-6787263 BGIOSGA032002 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA032028 R-OSI-1125621 BGIOSGA032028 [cytosol] R-OSI-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Oryza sativa Indica Group BGIOSGA032028 R-OSI-1125621 BGIOSGA032028 [cytosol] R-OSI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119438 Secologanin and strictosidine biosynthesis none Oryza sativa Indica Group BGIOSGA032028 R-OSI-1125621 BGIOSGA032028 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA032036 R-OSI-1124490 BGIOSGA032036 [cytosol] R-OSI-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119534 Pyridoxal 5'-phosphate salvage pathway none Oryza sativa Indica Group BGIOSGA032036 R-OSI-1124490 BGIOSGA032036 [cytosol] R-OSI-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119594 Pyridoxal 5'-phosphate biosynthesis none Oryza sativa Indica Group BGIOSGA032138 R-OSI-1129377 BGIOSGA032138 [endoplasmic reticulum membrane] R-OSI-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119260 Cardiolipin biosynthesis none Oryza sativa Indica Group BGIOSGA032138 R-OSI-1129377 BGIOSGA032138 [endoplasmic reticulum membrane] R-OSI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119402 Phospholipid biosynthesis I none Oryza sativa Indica Group BGIOSGA032204 R-OSI-1124757 BGIOSGA032204 [cytosol] R-OSI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119465 Sucrose biosynthesis none Oryza sativa Indica Group BGIOSGA032204 R-OSI-1124757 BGIOSGA032204 [cytosol] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA032247 R-OSI-8879061 LOS2 homolog [nucleoplasm] R-OSI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8879007 Response to cold temperature none Oryza sativa Indica Group BGIOSGA032408 R-OSI-9639029 BGIOSGA032408 [cytosol] R-OSI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119434 Phytic acid biosynthesis (lipid-independent) none Oryza sativa Indica Group BGIOSGA032416 R-OSI-8858194 BGIOSGA032416 [cytosol] R-OSI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119556 Choline biosynthesis I none Oryza sativa Indica Group BGIOSGA032502 R-OSI-1129305 BGIOSGA032502 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA032668 R-OSI-9639088 BGIOSGA032668 [plasma membrane] R-OSI-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9639136 Response to Aluminum stress none Oryza sativa Indica Group BGIOSGA032680 R-OSI-1128178 BGIOSGA032680 [cytosol] R-OSI-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119322 Leucodelphinidin biosynthesis none Oryza sativa Indica Group BGIOSGA032680 R-OSI-1128178 BGIOSGA032680 [cytosol] R-OSI-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Oryza sativa Indica Group BGIOSGA032680 R-OSI-9609575 BGIOSGA032680 [endoplasmic reticulum membrane] R-OSI-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9609573 Tricin biosynthesis none Oryza sativa Indica Group BGIOSGA032683 R-OSI-1124404 BGIOSGA032683 [cytosol] R-OSI-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119322 Leucodelphinidin biosynthesis none Oryza sativa Indica Group BGIOSGA032683 R-OSI-1124404 BGIOSGA032683 [cytosol] R-OSI-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Oryza sativa Indica Group BGIOSGA032704 R-OSI-1127597 BGIOSGA032704 [cytosol] R-OSI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119615 Mevalonate pathway none Oryza sativa Indica Group BGIOSGA032923 R-OSI-9682506 BGIOSGA032923 [cytosol] R-OSI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119410 Ascorbate biosynthesis none Oryza sativa Indica Group BGIOSGA032938 R-OSI-1127908 BGIOSGA032938 [cytosol] R-OSI-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119349 S-methylmethionine cycle none Oryza sativa Indica Group BGIOSGA032938 R-OSI-1127908 BGIOSGA032938 [cytosol] R-OSI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119400 Methionine biosynthesis II none Oryza sativa Indica Group BGIOSGA033011 R-OSI-1130101 BGIOSGA033011 [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA033103 R-OSI-1128528 BGIOSGA033103 [plasma membrane] R-OSI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119314 Cellulose biosynthesis none Oryza sativa Indica Group BGIOSGA033116 R-OSI-5683263 BGIOSGA033116 [cytosol] R-OSI-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119586 Cyanate degradation none Oryza sativa Indica Group BGIOSGA033127 R-OSI-5632268 BGIOSGA033127 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA033142 R-OSI-5608161 BGIOSGA033142 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA033177 R-OSI-9640731 BGIOSGA033177 [nucleoplasm] R-OSI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640882 Assembly of pre-replication complex none Oryza sativa Indica Group BGIOSGA033180 R-OSI-9640731-2 BGIOSGA033180 [nucleoplasm] R-OSI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640882 Assembly of pre-replication complex none Oryza sativa Indica Group BGIOSGA033194 R-OSI-5138500 BGIOSGA033194 [plastid stroma] R-OSI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119263 Arginine biosynthesis none Oryza sativa Indica Group BGIOSGA033194 R-OSI-1124075 BGIOSGA033194 [cytosol] R-OSI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119273 Lysine biosynthesis I none Oryza sativa Indica Group BGIOSGA033194 R-OSI-1124075 BGIOSGA033194 [cytosol] R-OSI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119283 Lysine biosynthesis II none Oryza sativa Indica Group BGIOSGA033194 R-OSI-1124075 BGIOSGA033194 [cytosol] R-OSI-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119295 Homoserine biosynthesis none Oryza sativa Indica Group BGIOSGA033194 R-OSI-5138500 BGIOSGA033194 [plastid stroma] R-OSI-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119539 Ornithine biosynthesis none Oryza sativa Indica Group BGIOSGA033194 R-OSI-5138500 BGIOSGA033194 [plastid stroma] R-OSI-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119622 Arginine biosynthesis II (acetyl cycle) none Oryza sativa Indica Group BGIOSGA033204 R-OSI-1123296 BGIOSGA033204 [chloroplast envelope] R-OSI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119402 Phospholipid biosynthesis I none Oryza sativa Indica Group BGIOSGA033214 R-OSI-8879004 BGIOSGA033214 [nucleoplasm] R-OSI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8879007 Response to cold temperature none Oryza sativa Indica Group BGIOSGA033233 R-OSI-5146758 BGIOSGA033233 [mitochondrial matrix] R-OSI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119533 TCA cycle (plant) none Oryza sativa Indica Group BGIOSGA033248 R-OSI-5608233 BGIOSGA033248 [plasma membrane] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA033278 R-OSI-8987554 BGIOSGA033278 [mitochondrial matrix] R-OSI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119312 Photorespiration none Oryza sativa Indica Group BGIOSGA033350 R-OSI-6788007 BGIOSGA033350 [cytosol] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA033386 R-OSI-5632250 phospho-BGIOSGA033386 [plasma membrane] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA033388 R-OSI-1127087 BGIOSGA033388 [cytosol] R-OSI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119438 Secologanin and strictosidine biosynthesis none Oryza sativa Indica Group BGIOSGA033404 R-OSI-4754220 BGIOSGA033404 [plastid stroma] R-OSI-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119449 Carotenoid biosynthesis none Oryza sativa Indica Group BGIOSGA033404 R-OSI-1126847 BGIOSGA033404 [cytosol] R-OSI-1119492 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119492 Lactucaxanthin biosynthesis none Oryza sativa Indica Group BGIOSGA033410 R-OSI-1123757 BGIOSGA033410 [cytosol] R-OSI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119473 Cytokinins-O-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA033417 R-OSI-1130416 BGIOSGA033417 [mitochondrial matrix] R-OSI-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119337 Proline degradation none Oryza sativa Indica Group BGIOSGA033417 R-OSI-1130416 BGIOSGA033417 [mitochondrial matrix] R-OSI-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119495 Citrulline biosynthesis none Oryza sativa Indica Group BGIOSGA033447 R-OSI-9930313 BGIOSGA033447 [nucleoplasm] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA033457 R-OSI-8933728 BGIOSGA033457 [nucleoplasm] R-OSI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8933811 Circadian rhythm none Oryza sativa Indica Group BGIOSGA033481 R-OSI-5632319 phospho-BGIOSGA033481 [plasma membrane] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA033493 R-OSI-6787119 BGIOSGA033493 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA033501 R-OSI-1127989 BGIOSGA033501 [plastid stroma] R-OSI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119430 Chorismate biosynthesis none Oryza sativa Indica Group BGIOSGA033502 R-OSI-1122783 BGIOSGA033502 [chloroplast stroma] R-OSI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119402 Phospholipid biosynthesis I none Oryza sativa Indica Group BGIOSGA033504 R-OSI-1127398 BGIOSGA033504 [plasma membrane] R-OSI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119314 Cellulose biosynthesis none Oryza sativa Indica Group BGIOSGA033504 R-OSI-1127398 BGIOSGA033504 [plasma membrane] R-OSI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9639861 Development of root hair none Oryza sativa Indica Group BGIOSGA033508 R-OSI-1127539 BGIOSGA033508 [cytosol] R-OSI-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Oryza sativa Indica Group BGIOSGA033508 R-OSI-1127539 BGIOSGA033508 [cytosol] R-OSI-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119439 Cholesterol biosynthesis III (via desmosterol) none Oryza sativa Indica Group BGIOSGA033508 R-OSI-1127539 BGIOSGA033508 [cytosol] R-OSI-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119559 Cholesterol biosynthesis I none Oryza sativa Indica Group BGIOSGA033656 R-OSI-1130036 BGIOSGA033656 [endoplasmic reticulum membrane] R-OSI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119402 Phospholipid biosynthesis I none Oryza sativa Indica Group BGIOSGA033679 R-OSI-5679502 BGIOSGA033679 [plastid stroma] R-OSI-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5367729 Strigolactone biosynthesis none Oryza sativa Indica Group BGIOSGA033719 R-OSI-9682481 BGIOSGA033719 [cytosol] R-OSI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119410 Ascorbate biosynthesis none Oryza sativa Indica Group BGIOSGA033719 R-OSI-9682481 BGIOSGA033719 [cytosol] R-OSI-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119628 GDP-mannose metabolism none Oryza sativa Indica Group BGIOSGA033734 R-OSI-9826664 ILI2 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA033817 R-OSI-1128320 BGIOSGA033817 [cytosol] R-OSI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119389 Phenylalanine biosynthesis I none Oryza sativa Indica Group BGIOSGA033817 R-OSI-1128320 BGIOSGA033817 [cytosol] R-OSI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119400 Methionine biosynthesis II none Oryza sativa Indica Group BGIOSGA033817 R-OSI-1128320 BGIOSGA033817 [cytosol] R-OSI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119506 tyrosine degradation I none Oryza sativa Indica Group BGIOSGA033831 R-OSI-8933824 BGIOSGA033831 [nucleoplasm] R-OSI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8933811 Circadian rhythm none Oryza sativa Indica Group BGIOSGA033832 R-OSI-1128734 BGIOSGA033832 [cytosol] R-OSI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119332 Jasmonic acid biosynthesis none Oryza sativa Indica Group BGIOSGA033833 R-OSI-5655107 BGIOSGA033833 [Golgi lumen] R-OSI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5655101 Xyloglucan biosynthesis none Oryza sativa Indica Group BGIOSGA033844 R-OSI-9675439 BGIOSGA033844 [mitochondrial matrix] R-OSI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030654 Primary root development none Oryza sativa Indica Group BGIOSGA033874 R-OSI-1126354 BGIOSGA033874 [cytosol] R-OSI-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119531 Flavonoid biosynthesis none Oryza sativa Indica Group BGIOSGA033901 R-OSI-5608102 BGIOSGA033901 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA033916 R-OSI-5608218 BGIOSGA033916 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA034012 R-OSI-1123372 BGIOSGA034012 [plastid stroma] R-OSI-1119521 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119521 Oryzalexin S biosynthesis none Oryza sativa Indica Group BGIOSGA034046 R-OSI-1129029 BGIOSGA034046 [cytosol] R-OSI-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119501 S-adenosyl-L-methionine cycle none Oryza sativa Indica Group BGIOSGA034140 R-OSI-1123489 BGIOSGA034140 [cytosol] R-OSI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119370 Sterol biosynthesis none Oryza sativa Indica Group BGIOSGA034146 R-OSI-1123430 BGIOSGA034146 [cytosol] R-OSI-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119437 Glutathione redox reactions I none Oryza sativa Indica Group BGIOSGA034193 R-OSI-1127455 BGIOSGA034193 [cytosol] R-OSI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119460 Isoleucine biosynthesis from threonine none Oryza sativa Indica Group BGIOSGA034193 R-OSI-1127455 BGIOSGA034193 [cytosol] R-OSI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119600 Valine biosynthesis none Oryza sativa Indica Group BGIOSGA034288 R-OSI-5683299 BGIOSGA034288 [cytosol] R-OSI-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119451 Xylose degradation none Oryza sativa Indica Group BGIOSGA034309 R-OSI-1122242 BGIOSGA034309 [cytosol] R-OSI-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119267 Phenylalanine degradation III none Oryza sativa Indica Group BGIOSGA034372 R-OSI-9675807 BGIOSGA034372 [nucleoplasm] R-OSI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675782 Maturation none Oryza sativa Indica Group BGIOSGA034372 R-OSI-9675807 BGIOSGA034372 [nucleoplasm] R-OSI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675815 Leading strand synthesis none Oryza sativa Indica Group BGIOSGA034372 R-OSI-9675807 BGIOSGA034372 [nucleoplasm] R-OSI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675885 Lagging strand synthesis none Oryza sativa Indica Group BGIOSGA034423 R-OSI-1123855 BGIOSGA034423 [plastid] R-OSI-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119407 Ureide biosynthesis none Oryza sativa Indica Group BGIOSGA034480 R-OSI-6788085 BGIOSGA034480 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA034481 R-OSI-9608694 BGIOSGA034481 [cytosol] R-OSI-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9928831 Severe drought none Oryza sativa Indica Group BGIOSGA034481 R-OSI-9928774 BGIOSGA034481 [nucleoplasm] R-OSI-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9928831 Severe drought none Oryza sativa Indica Group BGIOSGA034541 R-OSI-8858098 BGIOSGA034541 [plasma membrane] R-OSI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8858053 Polar auxin transport none Oryza sativa Indica Group BGIOSGA034546 R-OSI-1126593 BGIOSGA034546 [endosome] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA034546 R-OSI-5679293 BGIOSGA034546 [plasma membrane] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA034556 R-OSI-9025819 BGIOSGA034556 [plasma membrane] R-OSI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9025727 Iron uptake and transport in root vascular system none Oryza sativa Indica Group BGIOSGA034557 R-OSI-9025698 BGIOSGA034557 [plasma membrane] R-OSI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9025727 Iron uptake and transport in root vascular system none Oryza sativa Indica Group BGIOSGA034612 R-OSI-5632283 BGIOSGA034612 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA034612 R-OSI-5632283 BGIOSGA034612 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA034613 R-OSI-9928772 BGIOSGA034613 [nucleoplasm] R-OSI-9928831 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9928831 Severe drought none Oryza sativa Indica Group BGIOSGA034713 R-OSI-9636827 BGIOSGA034713 [nucleoplasm] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA034719 R-OSI-9645907 BGIOSGA034719 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA034719 R-OSI-9645907 BGIOSGA034719 [nucleoplasm] R-OSI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675824 DNA replication Initiation none Oryza sativa Indica Group BGIOSGA034767 R-OSI-9826645 NH5 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA034775 R-OSI-1127173-2 BGIOSGA034775 [cytosol] R-OSI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119540 Leucine biosynthesis none Oryza sativa Indica Group BGIOSGA034955 R-OSI-6787019 BGIOSGA034955 [cytosol] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA034971 R-OSI-9645941 BGIOSGA034971 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA035012 R-OSI-5084918 BGIOSGA035012 [cytosol] R-OSI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119624 Methionine salvage pathway none Oryza sativa Indica Group BGIOSGA035014 R-OSI-3240748 BGIOSGA035014 [cytosol] R-OSI-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Oryza sativa Indica Group BGIOSGA035021 R-OSI-1125307 BGIOSGA035021 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA035065 R-OSI-1129610 BGIOSGA035065 [cytosol] R-OSI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119506 tyrosine degradation I none Oryza sativa Indica Group BGIOSGA035109 R-OSI-9930255 MPK15 [nucleoplasm] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA035213 R-OSI-9025484 BGIOSGA035213 [endoplasmic reticulum membrane] R-OSI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119325 Sphingolipid metabolism none Oryza sativa Indica Group BGIOSGA035213 R-OSI-1127218 BGIOSGA035213 [cytosol] R-OSI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119610 Biotin biosynthesis II none Oryza sativa Indica Group BGIOSGA035270 R-OSI-9640753 BGIOSGA035270 [nucleoplasm] R-OSI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640882 Assembly of pre-replication complex none Oryza sativa Indica Group BGIOSGA035270 R-OSI-9640753 BGIOSGA035270 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA035270 R-OSI-9640753 BGIOSGA035270 [nucleoplasm] R-OSI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675824 DNA replication Initiation none Oryza sativa Indica Group BGIOSGA035271 R-OSI-1124969 BGIOSGA035271 [cytosol] R-OSI-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119265 Tetrahydrofolate biosynthesis I none Oryza sativa Indica Group BGIOSGA035271 R-OSI-1124969 BGIOSGA035271 [cytosol] R-OSI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119523 Tetrahydrofolate biosynthesis II none Oryza sativa Indica Group BGIOSGA035285 R-OSI-9826642 LAZY1 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA035285 R-OSI-9826622 LAZY1 [plasma membrane] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA035285 R-OSI-9826642 LAZY1 [nucleoplasm] R-OSI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924451 Shoot (tiller) formation and regulation of tiller angle none Oryza sativa Indica Group BGIOSGA035285 R-OSI-9826622 LAZY1 [plasma membrane] R-OSI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9924451 Shoot (tiller) formation and regulation of tiller angle none Oryza sativa Indica Group BGIOSGA035288 R-OSI-6787056 BGIOSGA035288 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA035341 R-OSI-9025471 BGIOSGA035341 [endoplasmic reticulum membrane] R-OSI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119325 Sphingolipid metabolism none Oryza sativa Indica Group BGIOSGA035341 R-OSI-1127934 BGIOSGA035341 [cytosol] R-OSI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119610 Biotin biosynthesis II none Oryza sativa Indica Group BGIOSGA035379 R-OSI-9640734 BGIOSGA035379 [nucleoplasm] R-OSI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640887 G1/S transition none Oryza sativa Indica Group BGIOSGA035379 R-OSI-9640881 phospho-BGIOSGA035379 [nucleoplasm] R-OSI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640887 G1/S transition none Oryza sativa Indica Group BGIOSGA035391 R-OSI-1123186 BGIOSGA035391 [mitochondrial matrix] R-OSI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119533 TCA cycle (plant) none Oryza sativa Indica Group BGIOSGA035474 R-OSI-9675803 BGIOSGA035474 [nucleoplasm] R-OSI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675815 Leading strand synthesis none Oryza sativa Indica Group BGIOSGA035511 R-OSI-8986777 BGIOSGA035511 [extracellular region] R-OSI-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8986768 Anther and pollen development none Oryza sativa Indica Group BGIOSGA035799 R-OSI-1122632 BGIOSGA035799 [cytosol] R-OSI-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119331 Cysteine biosynthesis I none Oryza sativa Indica Group BGIOSGA035823 R-OSI-5632111 BGIOSGA035823 [cytosol] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA035823 R-OSI-5632216 phospho-BGIOSGA035823 [cytosol] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA035823 R-OSI-5632145 phospho-BGIOSGA035823 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA035868 R-OSI-1127274 BGIOSGA035868 [cytosol] R-OSI-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119612 Cysteine degradation none Oryza sativa Indica Group BGIOSGA035890 R-OSI-1129784 BGIOSGA035890 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA035896 R-OSI-9658563 BGIOSGA035896 [endoplasmic reticulum lumen] R-OSI-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119502 Allantoin degradation none Oryza sativa Indica Group BGIOSGA035923 R-OSI-4415007 BGIOSGA035923 [cytosol] R-OSI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-3899351 Abscisic acid (ABA) mediated signaling none Oryza sativa Indica Group BGIOSGA035923 R-OSI-4415016 phospho-BGIOSGA035923 [cytosol] R-OSI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-3899351 Abscisic acid (ABA) mediated signaling none Oryza sativa Indica Group BGIOSGA035930 R-OSI-8879027 BGIOSGA035930 [nucleoplasm] R-OSI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8879007 Response to cold temperature none Oryza sativa Indica Group BGIOSGA035977 R-OSI-9611544 SPL11 [nucleoplasm] R-OSI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Oryza sativa Indica Group BGIOSGA035977 R-OSI-9611440 phospho-phosphorylated-SPL11 [nucleoplasm] R-OSI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Oryza sativa Indica Group BGIOSGA036008 R-OSI-9640745 BGIOSGA036008 [nucleoplasm] R-OSI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640882 Assembly of pre-replication complex none Oryza sativa Indica Group BGIOSGA036008 R-OSI-9640745 BGIOSGA036008 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA036008 R-OSI-9640745 BGIOSGA036008 [nucleoplasm] R-OSI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675824 DNA replication Initiation none Oryza sativa Indica Group BGIOSGA036014 R-OSI-1126971 BGIOSGA036014 [cytosol] R-OSI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119332 Jasmonic acid biosynthesis none Oryza sativa Indica Group BGIOSGA036014 R-OSI-1126971 BGIOSGA036014 [cytosol] R-OSI-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119618 13-LOX and 13-HPL pathway none Oryza sativa Indica Group BGIOSGA036024 R-OSI-1123894 BGIOSGA036024 [plasma membrane] R-OSI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119314 Cellulose biosynthesis none Oryza sativa Indica Group BGIOSGA036025 R-OSI-1123894-2 BGIOSGA036025 [plasma membrane] R-OSI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119314 Cellulose biosynthesis none Oryza sativa Indica Group BGIOSGA036072 R-OSI-9920304 BGIOSGA036072 [nucleoplasm] R-OSI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934036 Long day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA036072 R-OSI-9920304 BGIOSGA036072 [nucleoplasm] R-OSI-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8934108 Short day regulated expression of florigens none Oryza sativa Indica Group BGIOSGA036093 R-OSI-9916125 BGIOSGA036093 [nucleoplasm] R-OSI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9916190 Root angle formation: elongation and curvature response none Oryza sativa Indica Group BGIOSGA036093 R-OSI-9916231 BGIOSGA036093 [cytosol] R-OSI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9916190 Root angle formation: elongation and curvature response none Oryza sativa Indica Group BGIOSGA036093 R-OSI-9916199 phospho-BGIOSGA036093 [cytosol] R-OSI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9916190 Root angle formation: elongation and curvature response none Oryza sativa Indica Group BGIOSGA036179 R-OSI-1124949 BGIOSGA036179 [plastid stroma] R-OSI-1119371 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119371 Oryzalexin A-F biosynthesis none Oryza sativa Indica Group BGIOSGA036192 R-OSI-9682527 BGIOSGA036192 [cytosol] R-OSI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119410 Ascorbate biosynthesis none Oryza sativa Indica Group BGIOSGA036199 R-OSI-1129158 BGIOSGA036199 [nucleoplasm] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA036248 R-OSI-9612406 BGIOSGA036248 [mitochondrial matrix] R-OSI-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119612 Cysteine degradation none Oryza sativa Indica Group BGIOSGA036259 R-OSI-1125417 BGIOSGA036259 [cytosol] R-OSI-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119265 Tetrahydrofolate biosynthesis I none Oryza sativa Indica Group BGIOSGA036259 R-OSI-1125417 BGIOSGA036259 [cytosol] R-OSI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119523 Tetrahydrofolate biosynthesis II none Oryza sativa Indica Group BGIOSGA036344 R-OSI-1127151 BGIOSGA036344 [cytosol] R-OSI-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119384 NAD biosynthesis I (from aspartate) none Oryza sativa Indica Group BGIOSGA036353 R-OSI-1128087 BGIOSGA036353 [plastid stroma] R-OSI-1119319 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119319 Alanine biosynthesis III none Oryza sativa Indica Group BGIOSGA036396 R-OSI-9645947 BGIOSGA036396 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA036396 R-OSI-9645947 BGIOSGA036396 [nucleoplasm] R-OSI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675782 Maturation none Oryza sativa Indica Group BGIOSGA036396 R-OSI-9645947 BGIOSGA036396 [nucleoplasm] R-OSI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675815 Leading strand synthesis none Oryza sativa Indica Group BGIOSGA036396 R-OSI-9645947 BGIOSGA036396 [nucleoplasm] R-OSI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675824 DNA replication Initiation none Oryza sativa Indica Group BGIOSGA036396 R-OSI-9645947 BGIOSGA036396 [nucleoplasm] R-OSI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675885 Lagging strand synthesis none Oryza sativa Indica Group BGIOSGA036456 R-OSI-5632134 BGIOSGA036456 [cytosol] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA036517 R-OSI-1126892 BGIOSGA036517 [cytosol] R-OSI-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119353 Linear furanocoumarin biosynthesis none Oryza sativa Indica Group BGIOSGA036554 R-OSI-1126741 BGIOSGA036554 [plastid] R-OSI-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119407 Ureide biosynthesis none Oryza sativa Indica Group BGIOSGA036575 R-OSI-9030899 BGIOSGA036575 [nucleoplasm] R-OSI-9030908 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030908 Underwater shoot and internode elongation none Oryza sativa Indica Group BGIOSGA036595 R-OSI-9640722 BGIOSGA036595 [nucleoplasm] R-OSI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9640887 G1/S transition none Oryza sativa Indica Group BGIOSGA036617 R-OSI-6788014 BGIOSGA036617 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA036631 R-OSI-5655070 BGIOSGA036631 [Golgi lumen] R-OSI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5655101 Xyloglucan biosynthesis none Oryza sativa Indica Group BGIOSGA036660 R-OSI-1129809 BGIOSGA036660 [mitochondrial inner membrane] R-OSI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119410 Ascorbate biosynthesis none Oryza sativa Indica Group BGIOSGA036715 R-OSI-1126387 BGIOSGA036715 [cytosol] R-OSI-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119295 Homoserine biosynthesis none Oryza sativa Indica Group BGIOSGA036798 R-OSI-1130055 BGIOSGA036798 [endoplasmic reticulum membrane] R-OSI-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119260 Cardiolipin biosynthesis none Oryza sativa Indica Group BGIOSGA036798 R-OSI-1130055 BGIOSGA036798 [endoplasmic reticulum membrane] R-OSI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119402 Phospholipid biosynthesis I none Oryza sativa Indica Group BGIOSGA036813 R-OSI-1123085 BGIOSGA036813 [cytosol] R-OSI-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119300 Glycolipid desaturation none Oryza sativa Indica Group BGIOSGA036872 R-OSI-9826690 BGIOSGA036872 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA036905 R-OSI-9826607 BGIOSGA036905 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA036920 R-OSI-9930206 BGIOSGA036920 [nucleoplasm] R-OSI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9766881 TF network involved in salinity response none Oryza sativa Indica Group BGIOSGA036921 R-OSI-9826671 NAC77 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA036924 R-OSI-9645910 BGIOSGA036924 [nucleoplasm] R-OSI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9645850 Activation of pre-replication complex none Oryza sativa Indica Group BGIOSGA036924 R-OSI-9645910 BGIOSGA036924 [nucleoplasm] R-OSI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675824 DNA replication Initiation none Oryza sativa Indica Group BGIOSGA036962 R-OSI-1122326 BGIOSGA036962 [cytosol] R-OSI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119438 Secologanin and strictosidine biosynthesis none Oryza sativa Indica Group BGIOSGA036963 R-OSI-1127173 BGIOSGA036963 [cytosol] R-OSI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119540 Leucine biosynthesis none Oryza sativa Indica Group BGIOSGA037005 R-OSI-1123746 BGIOSGA037005 [cytosol] R-OSI-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119586 Cyanate degradation none Oryza sativa Indica Group BGIOSGA037012 R-OSI-9828974 CKX3 [endoplasmic reticulum lumen] R-OSI-9828944 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9828944 Regulation of lemma joint development and leaf angle by cytokinin none Oryza sativa Indica Group BGIOSGA037059 R-OSI-1125550 BGIOSGA037059 [cytosol] R-OSI-1119623 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119623 Acyl-CoA synthetase pathway none Oryza sativa Indica Group BGIOSGA037089 R-OSI-9675877 BGIOSGA037089 [nucleoplasm] R-OSI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9675815 Leading strand synthesis none Oryza sativa Indica Group BGIOSGA037107 R-OSI-9611889 BGIOSGA037107 [mitochondrial matrix] R-OSI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119479 Valine degradation none Oryza sativa Indica Group BGIOSGA037120 R-OSI-1125275 BGIOSGA037120 [cytosol] R-OSI-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119629 Thiamine biosynthesis none Oryza sativa Indica Group BGIOSGA037140 R-OSI-9608992 BGIOSGA037140 [nucleoplasm] R-OSI-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9609102 Flower development none Oryza sativa Indica Group BGIOSGA037150 R-OSI-1127353 BGIOSGA037150 [cytosol] R-OSI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119506 tyrosine degradation I none Oryza sativa Indica Group BGIOSGA037151 R-OSI-1128511 BGIOSGA037151 [cytosol] R-OSI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119506 tyrosine degradation I none Oryza sativa Indica Group BGIOSGA037153 R-OSI-1127527 BGIOSGA037153 [cytosol] R-OSI-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Oryza sativa Indica Group BGIOSGA037196 R-OSI-5138489 BGIOSGA037196 [plastid stroma] R-OSI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119263 Arginine biosynthesis none Oryza sativa Indica Group BGIOSGA037196 R-OSI-1127893 BGIOSGA037196 [cytosol] R-OSI-1119444 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119444 Canavanine biosynthesis none Oryza sativa Indica Group BGIOSGA037196 R-OSI-5138489 BGIOSGA037196 [plastid stroma] R-OSI-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119622 Arginine biosynthesis II (acetyl cycle) none Oryza sativa Indica Group BGIOSGA037196 R-OSI-5138489 BGIOSGA037196 [plastid stroma] R-OSI-5633340 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5633340 Citrulline-nitric oxide cycle none Oryza sativa Indica Group BGIOSGA037257 R-OSI-8987553 BGIOSGA037257 [chloroplast] R-OSI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119312 Photorespiration none Oryza sativa Indica Group BGIOSGA037257 R-OSI-1126896 BGIOSGA037257 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA037260 R-OSI-8987523 BGIOSGA037260 [chloroplast] R-OSI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119312 Photorespiration none Oryza sativa Indica Group BGIOSGA037260 R-OSI-1129568 BGIOSGA037260 [plastid stroma] R-OSI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119519 Calvin cycle none Oryza sativa Indica Group BGIOSGA037341 R-OSI-1125460 BGIOSGA037341 [cytosol] R-OSI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119452 Galactose degradation II none Oryza sativa Indica Group BGIOSGA037341 R-OSI-1125460 BGIOSGA037341 [cytosol] R-OSI-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119563 UDP-D-xylose biosynthesis none Oryza sativa Indica Group BGIOSGA037341 R-OSI-1125460 BGIOSGA037341 [cytosol] R-OSI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119574 UDP-L-arabinose biosynthesis and transport none Oryza sativa Indica Group BGIOSGA037342 R-OSI-1124601 BGIOSGA037342 [cytosol] R-OSI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119452 Galactose degradation II none Oryza sativa Indica Group BGIOSGA037342 R-OSI-1124601 BGIOSGA037342 [cytosol] R-OSI-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119563 UDP-D-xylose biosynthesis none Oryza sativa Indica Group BGIOSGA037342 R-OSI-1124601 BGIOSGA037342 [cytosol] R-OSI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119574 UDP-L-arabinose biosynthesis and transport none Oryza sativa Indica Group BGIOSGA037371 R-OSI-8986771 BGIOSGA037371 [plasma membrane] R-OSI-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-8986768 Anther and pollen development none Oryza sativa Indica Group BGIOSGA037430 R-OSI-6788201 BGIOSGA037430 [nucleoplasm] R-OSI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6788019 Salicylic acid signaling none Oryza sativa Indica Group BGIOSGA037447 R-OSI-1128080 BGIOSGA037447 [cytosol] R-OSI-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119516 Trehalose biosynthesis I none Oryza sativa Indica Group BGIOSGA037500 R-OSI-1129924 BGIOSGA037500 [cytosol] R-OSI-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119342 Gamma-glutamyl cycle none Oryza sativa Indica Group BGIOSGA037500 R-OSI-1129924 BGIOSGA037500 [cytosol] R-OSI-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119483 Glutathione biosynthesis none Oryza sativa Indica Group BGIOSGA037504 R-OSI-5608090 BGIOSGA037504 [plasma membrane] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA037504 R-OSI-5608190 BGIOSGA037504 [cytosol] R-OSI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5608118 Auxin signalling none Oryza sativa Indica Group BGIOSGA037531 R-OSI-9607149 BGIOSGA037531 [plasma membrane] R-OSI-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9607185 Generation of superoxide radicals none Oryza sativa Indica Group BGIOSGA037531 R-OSI-9607094 phospho-BGIOSGA037531 [plasma membrane] R-OSI-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9607185 Generation of superoxide radicals none Oryza sativa Indica Group BGIOSGA037664 R-OSI-1124380 BGIOSGA037664 [cytosol] R-OSI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119389 Phenylalanine biosynthesis I none Oryza sativa Indica Group BGIOSGA037738 R-OSI-1125540 BGIOSGA037738 [cytosol] R-OSI-1119303 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119303 Pyridoxamine anabolism none Oryza sativa Indica Group BGIOSGA037738 R-OSI-1125540 BGIOSGA037738 [cytosol] R-OSI-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119534 Pyridoxal 5'-phosphate salvage pathway none Oryza sativa Indica Group BGIOSGA037758 R-OSI-1128594 BGIOSGA037758 [cytosol] R-OSI-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119349 S-methylmethionine cycle none Oryza sativa Indica Group BGIOSGA037758 R-OSI-1128594 BGIOSGA037758 [cytosol] R-OSI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119400 Methionine biosynthesis II none Oryza sativa Indica Group BGIOSGA037772 R-OSI-5632280 BGIOSGA037772 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA037772 R-OSI-5632280 BGIOSGA037772 [nucleoplasm] R-OSI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5679411 Gibberellin signaling none Oryza sativa Indica Group BGIOSGA037787 R-OSI-1124232 BGIOSGA037787 [cytosol] R-OSI-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119341 Galactosylcyclitol biosynthesis none Oryza sativa Indica Group BGIOSGA037799 R-OSI-9826635 PCF8 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA037804 R-OSI-5221146 BGIOSGA037804 [plastid] R-OSI-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119374 Abscisic acid biosynthesis none Oryza sativa Indica Group BGIOSGA037817 R-OSI-9826669 OsYABBY6 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BGIOSGA037828 R-OSI-1125151 BGIOSGA037828 [cytosol] R-OSI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119400 Methionine biosynthesis II none Oryza sativa Indica Group BGIOSGA037828 R-OSI-1125151 BGIOSGA037828 [cytosol] R-OSI-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119501 S-adenosyl-L-methionine cycle none Oryza sativa Indica Group BGIOSGA037844 R-OSI-9025508 BGIOSGA037844 [endoplasmic reticulum membrane] R-OSI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119325 Sphingolipid metabolism none Oryza sativa Indica Group BGIOSGA037848 R-OSI-9626337 BGIOSGA037848 [Golgi-associated vesicle] R-OSI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9626305 Regulatory network of nutrient accumulation none Oryza sativa Indica Group BGIOSGA037874 R-OSI-9609343 BGIOSGA037874 [cytosol] R-OSI-9609352 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9609352 Lycopene catabolism none Oryza sativa Indica Group BGIOSGA037886 R-OSI-5654797 BGIOSGA037886 [nucleoplasm] R-OSI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5654828 Strigolactone signaling none Oryza sativa Indica Group BGIOSGA037887 R-OSI-1125804 BGIOSGA037887 [cytosol] R-OSI-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119300 Glycolipid desaturation none Oryza sativa Indica Group BGIOSGA038038 R-OSI-1129169 BGIOSGA038038 [plastid stroma] R-OSI-1119308 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119308 Momilactone biosynthesis none Oryza sativa Indica Group BGIOSGA038064 R-OSI-9030894 BGIOSGA038064 [nucleoplasm] R-OSI-9030908 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9030908 Underwater shoot and internode elongation none Oryza sativa Indica Group BGIOSGA038099 R-OSI-1129818 BGIOSGA038099 [mitochondrial matrix] R-OSI-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119365 Lysine degradation II none Oryza sativa Indica Group BGIOSGA038099 R-OSI-1173242 BGIOSGA038099 [mitochondrial matrix] R-OSI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119533 TCA cycle (plant) none Oryza sativa Indica Group BGIOSGA038154 R-OSI-8987531 BGIOSGA038154 [chloroplast] R-OSI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119312 Photorespiration none Oryza sativa Indica Group BGIOSGA038561 R-OSI-1123943 BGIOSGA038561 [plastid] R-OSI-1119365 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119365 Lysine degradation II none Oryza sativa Indica Group BGIOSGA038718 R-OSI-6787012-2 BGIOSGA038718 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA040160 R-OSI-1125098 BGIOSGA040160 [cytosol] R-OSI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119473 Cytokinins-O-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA040443 R-OSI-1127413 BGIOSGA040443 [mitochondrial inner membrane] R-OSI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119410 Ascorbate biosynthesis none Oryza sativa Indica Group BGIOSGA040463 R-OSI-1122403 BGIOSGA040463 [amyloplast] R-OSI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119477 Starch biosynthesis none Oryza sativa Indica Group BGIOSGA040468 R-OSI-1122881 BGIOSGA040468 [cytosol] R-OSI-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Oryza sativa Indica Group BGIOSGA040468 R-OSI-1122881 BGIOSGA040468 [cytosol] R-OSI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119438 Secologanin and strictosidine biosynthesis none Oryza sativa Indica Group BGIOSGA040468 R-OSI-1122881 BGIOSGA040468 [cytosol] R-OSI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119486 IAA biosynthesis I none Oryza sativa Indica Group BGIOSGA040481 R-OSI-5632109 BGIOSGA040481 [nucleoplasm] R-OSI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-5632095 Brassinosteroid signaling none Oryza sativa Indica Group BGIOSGA040489 R-OSI-6786934 BGIOSGA040489 [nucleoplasm] R-OSI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-6787011 Jasmonic acid signaling none Oryza sativa Indica Group BGIOSGA040585 R-OSI-1125631 BGIOSGA040585 [cytosol] R-OSI-1119321 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119321 Glycerol degradation I none Oryza sativa Indica Group BGIOSGA040592 R-OSI-1124540 BGIOSGA040592 [cytosol] R-OSI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-1119473 Cytokinins-O-glucoside biosynthesis none Oryza sativa Indica Group BGIOSGA040642 R-OSI-9826615 RERJ1 [nucleoplasm] R-OSI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-OSI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Oryza sativa Indica Group BRADI_1g00666v3 R-BDI-6787093 BRADI_1g00666v3 [nucleoplasm] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g01460v3 R-BDI-1126091 BRADI_1g01460v3 [cytosol] R-BDI-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119394 Pantothenate and coenzyme A biosynthesis III none Brachypodium distachyon BRADI_1g01460v3 R-BDI-1126091 BRADI_1g01460v3 [cytosol] R-BDI-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119496 Pantothenate biosynthesis I none Brachypodium distachyon BRADI_1g01460v3 R-BDI-1126091 BRADI_1g01460v3 [cytosol] R-BDI-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119544 Pantothenate biosynthesis II none Brachypodium distachyon BRADI_1g01460v3 R-BDI-1126091 BRADI_1g01460v3 [cytosol] R-BDI-1119568 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119568 Pantothenate biosynthesis III none Brachypodium distachyon BRADI_1g01800v3 R-BDI-1126714 BRADI_1g01800v3 [cytosol] R-BDI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119273 Lysine biosynthesis I none Brachypodium distachyon BRADI_1g01800v3 R-BDI-1126714 BRADI_1g01800v3 [cytosol] R-BDI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119283 Lysine biosynthesis II none Brachypodium distachyon BRADI_1g01800v3 R-BDI-1126714 BRADI_1g01800v3 [cytosol] R-BDI-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119295 Homoserine biosynthesis none Brachypodium distachyon BRADI_1g01800v3 R-BDI-5606484 BRADI_1g01800v3 [plastid stroma] R-BDI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119419 Lysine biosynthesis VI none Brachypodium distachyon BRADI_1g01930v3 R-BDI-5632129 BRADI_1g01930v3 [nucleoplasm] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_1g02530v3 R-BDI-2685731 BRADI_1g02530v3 [cytosol] R-BDI-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119580 IAA biosynthesis II none Brachypodium distachyon BRADI_1g02610v3 R-BDI-9626474 BRADI_1g02610v3 [trans-Golgi network membrane] R-BDI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9626305 Regulatory network of nutrient accumulation none Brachypodium distachyon BRADI_1g02810v3 R-BDI-1129507 BRADI_1g02810v3 [cytosol] R-BDI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119452 Galactose degradation II none Brachypodium distachyon BRADI_1g03260v3 R-BDI-1128656 BRADI_1g03260v3 [chloroplast] R-BDI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119494 Tryptophan biosynthesis none Brachypodium distachyon BRADI_1g03380v3 R-BDI-8986695 BRADI_1g03380v3 [endoplasmic reticulum membrane] R-BDI-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8986768 Anther and pollen development none Brachypodium distachyon BRADI_1g03840v3 R-BDI-1124274 BRADI_1g03840v3 [cytosol] R-BDI-1119513 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119513 Pinobanksin biosynthesis none Brachypodium distachyon BRADI_1g03840v3 R-BDI-1124274 BRADI_1g03840v3 [cytosol] R-BDI-1119531 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119531 Flavonoid biosynthesis none Brachypodium distachyon BRADI_1g03880v3 R-BDI-9608682 BRADI_1g03880v3 [nucleoplasm] R-BDI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8934036 Long day regulated expression of florigens none Brachypodium distachyon BRADI_1g03880v3 R-BDI-9608682 BRADI_1g03880v3 [nucleoplasm] R-BDI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9608575 Reproductive meristem phase change none Brachypodium distachyon BRADI_1g03880v3 R-BDI-9608606 BRADI_1g03880v3 [cytosol] R-BDI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9608575 Reproductive meristem phase change none Brachypodium distachyon BRADI_1g04320v3 R-BDI-1250417 BRADI_1g04320v3 [cytosol] R-BDI-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119374 Abscisic acid biosynthesis none Brachypodium distachyon BRADI_1g04597v3 R-BDI-1122861 BRADI_1g04597v3 [plasma membrane] R-BDI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119314 Cellulose biosynthesis none Brachypodium distachyon BRADI_1g04850v3 R-BDI-5632241 BRADI_1g04850v3 [nucleoplasm] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_1g04870v3 R-BDI-1128553-2 BRADI_1g04870v3 [cytosol] R-BDI-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Brachypodium distachyon BRADI_1g04870v3 R-BDI-1128553-2 BRADI_1g04870v3 [cytosol] R-BDI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119370 Sterol biosynthesis none Brachypodium distachyon BRADI_1g04870v3 R-BDI-1128553-2 BRADI_1g04870v3 [cytosol] R-BDI-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119439 Cholesterol biosynthesis III (via desmosterol) none Brachypodium distachyon BRADI_1g04870v3 R-BDI-1128553-2 BRADI_1g04870v3 [cytosol] R-BDI-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119559 Cholesterol biosynthesis I none Brachypodium distachyon BRADI_1g04900v3 R-BDI-1128553 BRADI_1g04900v3 [cytosol] R-BDI-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Brachypodium distachyon BRADI_1g04900v3 R-BDI-1128553 BRADI_1g04900v3 [cytosol] R-BDI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119370 Sterol biosynthesis none Brachypodium distachyon BRADI_1g04900v3 R-BDI-1128553 BRADI_1g04900v3 [cytosol] R-BDI-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119439 Cholesterol biosynthesis III (via desmosterol) none Brachypodium distachyon BRADI_1g04900v3 R-BDI-1128553 BRADI_1g04900v3 [cytosol] R-BDI-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119559 Cholesterol biosynthesis I none Brachypodium distachyon BRADI_1g05050v3 R-BDI-1123745-2 BRADI_1g05050v3 [endoplasmic reticulum membrane] R-BDI-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119260 Cardiolipin biosynthesis none Brachypodium distachyon BRADI_1g05050v3 R-BDI-1123745-2 BRADI_1g05050v3 [endoplasmic reticulum membrane] R-BDI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119402 Phospholipid biosynthesis I none Brachypodium distachyon BRADI_1g05116v3 R-BDI-1125587 BRADI_1g05116v3 [cytosol] R-BDI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119379 Flavin biosynthesis none Brachypodium distachyon BRADI_1g05450v3 R-BDI-1129781 BRADI_1g05450v3 [chloroplast] R-BDI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119494 Tryptophan biosynthesis none Brachypodium distachyon BRADI_1g05460v3 R-BDI-1129781-2 BRADI_1g05460v3 [chloroplast] R-BDI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119494 Tryptophan biosynthesis none Brachypodium distachyon BRADI_1g05467v3 R-BDI-1128191 BRADI_1g05467v3 [chloroplast] R-BDI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119494 Tryptophan biosynthesis none Brachypodium distachyon BRADI_1g06060v3 R-BDI-9675838 BRADI_1g06060v3 [nucleoplasm] R-BDI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9675815 Leading strand synthesis none Brachypodium distachyon BRADI_1g06160v3 R-BDI-1250418 BRADI_1g06160v3 [cytosol] R-BDI-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119374 Abscisic acid biosynthesis none Brachypodium distachyon BRADI_1g06160v3 R-BDI-1129305 BRADI_1g06160v3 [cytosol] R-BDI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119486 IAA biosynthesis I none Brachypodium distachyon BRADI_1g06177v3 R-BDI-1250418-3 BRADI_1g06177v3 [cytosol] R-BDI-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119374 Abscisic acid biosynthesis none Brachypodium distachyon BRADI_1g06177v3 R-BDI-1129305-3 BRADI_1g06177v3 [cytosol] R-BDI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119486 IAA biosynthesis I none Brachypodium distachyon BRADI_1g06200v3 R-BDI-1250418-2 BRADI_1g06200v3 [cytosol] R-BDI-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119374 Abscisic acid biosynthesis none Brachypodium distachyon BRADI_1g06200v3 R-BDI-1129305-2 BRADI_1g06200v3 [cytosol] R-BDI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119486 IAA biosynthesis I none Brachypodium distachyon BRADI_1g06430v3 R-BDI-8987551 BRADI_1g06430v3 [peroxisomal matrix] R-BDI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119312 Photorespiration none Brachypodium distachyon BRADI_1g06430v3 R-BDI-1124984 BRADI_1g06430v3 [cytosol] R-BDI-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119596 Glutamate biosynthesis I none Brachypodium distachyon BRADI_1g06560v3 R-BDI-5654913 BRADI_1g06560v3 [Golgi lumen] R-BDI-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5654909 Xylan biosynthesis none Brachypodium distachyon BRADI_1g06670v3 R-BDI-5632110 BRADI_1g06670v3 [nucleoplasm] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_1g06670v3 R-BDI-5632110 BRADI_1g06670v3 [nucleoplasm] R-BDI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5679411 Gibberellin signaling none Brachypodium distachyon BRADI_1g06750v3 R-BDI-1124484 BRADI_1g06750v3 [plastid stroma] R-BDI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119519 Calvin cycle none Brachypodium distachyon BRADI_1g06790v3 R-BDI-9025548 BRADI_1g06790v3 [endoplasmic reticulum membrane] R-BDI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119325 Sphingolipid metabolism none Brachypodium distachyon BRADI_1g06810v3 R-BDI-1123404 BRADI_1g06810v3 [peroxisomal matrix] R-BDI-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119407 Ureide biosynthesis none Brachypodium distachyon BRADI_1g07035v3 R-BDI-1124935 BRADI_1g07035v3 [cytosol] R-BDI-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119349 S-methylmethionine cycle none Brachypodium distachyon BRADI_1g07620v3 R-BDI-4415109 phospho-BRADI_1g07620v3 [cytosol] R-BDI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-3899351 Abscisic acid (ABA) mediated signaling none Brachypodium distachyon BRADI_1g07750v3 R-BDI-8933816 BRADI_1g07750v3 [nucleoplasm] R-BDI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8933811 Circadian rhythm none Brachypodium distachyon BRADI_1g07910v3 R-BDI-1125504 BRADI_1g07910v3 [cytosol] R-BDI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119273 Lysine biosynthesis I none Brachypodium distachyon BRADI_1g07910v3 R-BDI-1125504 BRADI_1g07910v3 [cytosol] R-BDI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119283 Lysine biosynthesis II none Brachypodium distachyon BRADI_1g07910v3 R-BDI-1125504 BRADI_1g07910v3 [cytosol] R-BDI-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119295 Homoserine biosynthesis none Brachypodium distachyon BRADI_1g07910v3 R-BDI-5606489 BRADI_1g07910v3 [plastid stroma] R-BDI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119419 Lysine biosynthesis VI none Brachypodium distachyon BRADI_1g07950v3 R-BDI-9640694 BRADI_1g07950v3 [nucleoplasm] R-BDI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9640882 Assembly of pre-replication complex none Brachypodium distachyon BRADI_1g07950v3 R-BDI-9640694 BRADI_1g07950v3 [nucleoplasm] R-BDI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9645850 Activation of pre-replication complex none Brachypodium distachyon BRADI_1g08120v3 R-BDI-1125460 BRADI_1g08120v3 [cytosol] R-BDI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119452 Galactose degradation II none Brachypodium distachyon BRADI_1g08120v3 R-BDI-1125460 BRADI_1g08120v3 [cytosol] R-BDI-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119563 UDP-D-xylose biosynthesis none Brachypodium distachyon BRADI_1g08120v3 R-BDI-1125460 BRADI_1g08120v3 [cytosol] R-BDI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119574 UDP-L-arabinose biosynthesis and transport none Brachypodium distachyon BRADI_1g08280v3 R-BDI-9639171 BRADI_1g08280v3 [plant-type vacuole membrane] R-BDI-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9639136 Response to Aluminum stress none Brachypodium distachyon BRADI_1g08340v3 R-BDI-8934009 BRADI_1g08340v3 [nucleoplasm] R-BDI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8934036 Long day regulated expression of florigens none Brachypodium distachyon BRADI_1g08340v3 R-BDI-8934009 BRADI_1g08340v3 [nucleoplasm] R-BDI-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8934257 Transition from vegetative to reproductive shoot apical meristem none Brachypodium distachyon BRADI_1g08340v3 R-BDI-8934009 BRADI_1g08340v3 [nucleoplasm] R-BDI-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9609102 Flower development none Brachypodium distachyon BRADI_1g08480v3 R-BDI-1126604 BRADI_1g08480v3 [cytosol] R-BDI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119438 Secologanin and strictosidine biosynthesis none Brachypodium distachyon BRADI_1g09030v3 R-BDI-1128257 BRADI_1g09030v3 [plastid stroma] R-BDI-1119529 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119529 Sulfate activation for sulfonation none Brachypodium distachyon BRADI_1g09090v3 R-BDI-1128092 BRADI_1g09090v3 [nucleoplasm] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_1g09090v3 R-BDI-1128092 BRADI_1g09090v3 [nucleoplasm] R-BDI-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9030557 Lateral root initiation none Brachypodium distachyon BRADI_1g09090v3 R-BDI-1128092 BRADI_1g09090v3 [nucleoplasm] R-BDI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9030654 Primary root development none Brachypodium distachyon BRADI_1g09300v3 R-BDI-8987575 BRADI_1g09300v3 [mitochondrial matrix] R-BDI-1119311 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119311 Glycine biosynthesis I none Brachypodium distachyon BRADI_1g09370v3 R-BDI-9640783 BRADI_1g09370v3 [nucleoplasm] R-BDI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9640760 G1 phase none Brachypodium distachyon BRADI_1g09390v3 R-BDI-8879001 BRADI_1g09390v3 [nucleoplasm] R-BDI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8879007 Response to cold temperature none Brachypodium distachyon BRADI_1g09400v3 R-BDI-1125341 BRADI_1g09400v3 [cytosol] R-BDI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119460 Isoleucine biosynthesis from threonine none Brachypodium distachyon BRADI_1g09400v3 R-BDI-1125341 BRADI_1g09400v3 [cytosol] R-BDI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119600 Valine biosynthesis none Brachypodium distachyon BRADI_1g09537v3 R-BDI-1122398 BRADI_1g09537v3 [amyloplast] R-BDI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119477 Starch biosynthesis none Brachypodium distachyon BRADI_1g09550v3 R-BDI-6786984 BRADI_1g09550v3 [nucleoplasm] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g09550v3 R-BDI-6787051 BRADI_1g09550v3 [cytosol] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g09670v3 R-BDI-9035785 BRADI_1g09670v3 [nucleoplasm] R-BDI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9608575 Reproductive meristem phase change none Brachypodium distachyon BRADI_1g09710v3 R-BDI-1128745 BRADI_1g09710v3 [plastid stroma] R-BDI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119464 Methylerythritol phosphate pathway none Brachypodium distachyon BRADI_1g09900v3 R-BDI-9035593 BRADI_1g09900v3 [cytosol] R-BDI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9035605 Regulation of seed size none Brachypodium distachyon BRADI_1g09900v3 R-BDI-9035634 BRADI_1g09900v3 [nucleoplasm] R-BDI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9035605 Regulation of seed size none Brachypodium distachyon BRADI_1g09900v3 R-BDI-9035593 BRADI_1g09900v3 [cytosol] R-BDI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9608575 Reproductive meristem phase change none Brachypodium distachyon BRADI_1g09900v3 R-BDI-9035634 BRADI_1g09900v3 [nucleoplasm] R-BDI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9608575 Reproductive meristem phase change none Brachypodium distachyon BRADI_1g10030v3 R-BDI-1123895 BRADI_1g10030v3 [cytosol] R-BDI-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119334 Ethylene biosynthesis from methionine none Brachypodium distachyon BRADI_1g10030v3 R-BDI-1123895 BRADI_1g10030v3 [cytosol] R-BDI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119624 Methionine salvage pathway none Brachypodium distachyon BRADI_1g10047v3 R-BDI-9631619 BRADI_1g10047v3 [nucleoplasm] R-BDI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brachypodium distachyon BRADI_1g10140v3 R-BDI-9639012 BRADI_1g10140v3 [cytosol] R-BDI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119434 Phytic acid biosynthesis (lipid-independent) none Brachypodium distachyon BRADI_1g10180v3 R-BDI-9927759 BRADI_1g10180v3 [nucleoplasm] R-BDI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8934036 Long day regulated expression of florigens none Brachypodium distachyon BRADI_1g10480v3 R-BDI-1123077 BRADI_1g10480v3 [cytosol] R-BDI-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119458 Glutamate degradation none Brachypodium distachyon BRADI_1g10510v3 R-BDI-8933842 BRADI_1g10510v3 [cytosol] R-BDI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8933811 Circadian rhythm none Brachypodium distachyon BRADI_1g10510v3 R-BDI-8933843 BRADI_1g10510v3 [nucleoplasm] R-BDI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8933811 Circadian rhythm none Brachypodium distachyon BRADI_1g10520v3 R-BDI-8933842-2 BRADI_1g10520v3 [cytosol] R-BDI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8933811 Circadian rhythm none Brachypodium distachyon BRADI_1g10520v3 R-BDI-8933843-2 BRADI_1g10520v3 [nucleoplasm] R-BDI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8933811 Circadian rhythm none Brachypodium distachyon BRADI_1g10650v3 R-BDI-1125460-2 BRADI_1g10650v3 [cytosol] R-BDI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119452 Galactose degradation II none Brachypodium distachyon BRADI_1g10650v3 R-BDI-1125460-2 BRADI_1g10650v3 [cytosol] R-BDI-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119563 UDP-D-xylose biosynthesis none Brachypodium distachyon BRADI_1g10650v3 R-BDI-1125460-2 BRADI_1g10650v3 [cytosol] R-BDI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119574 UDP-L-arabinose biosynthesis and transport none Brachypodium distachyon BRADI_1g10780v3 R-BDI-1123563 BRADI_1g10780v3 [cytosol] R-BDI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119379 Flavin biosynthesis none Brachypodium distachyon BRADI_1g10917v3 R-BDI-1124285-2 BRADI_1g10917v3 [cytosol] R-BDI-1119284 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119284 Coumarin biosynthesis (via 2-coumarate) none Brachypodium distachyon BRADI_1g10930v3 R-BDI-1124285 BRADI_1g10930v3 [cytosol] R-BDI-1119284 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119284 Coumarin biosynthesis (via 2-coumarate) none Brachypodium distachyon BRADI_1g11060v3 R-BDI-5654829 BRADI_1g11060v3 [nucleoplasm] R-BDI-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Brachypodium distachyon BRADI_1g11090v3 R-BDI-5679455 BRADI_1g11090v3 [nucleoplasm] R-BDI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5679411 Gibberellin signaling none Brachypodium distachyon BRADI_1g11090v3 R-BDI-6787020 BRADI_1g11090v3 [cytosol] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g11120v3 R-BDI-1126513 BRADI_1g11120v3 [cytosol] R-BDI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119332 Jasmonic acid biosynthesis none Brachypodium distachyon BRADI_1g11290v3 R-BDI-5632316 BRADI_1g11290v3 [cytosol] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_1g11440v3 R-BDI-1128632 BRADI_1g11440v3 [cytosol] R-BDI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119465 Sucrose biosynthesis none Brachypodium distachyon BRADI_1g11440v3 R-BDI-1128632 BRADI_1g11440v3 [cytosol] R-BDI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119477 Starch biosynthesis none Brachypodium distachyon BRADI_1g11450v3 R-BDI-1125564 BRADI_1g11450v3 [cytosol] R-BDI-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119291 Nitrate assimilation none Brachypodium distachyon BRADI_1g11450v3 R-BDI-1125564 BRADI_1g11450v3 [cytosol] R-BDI-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119293 Glutamine biosynthesis I none Brachypodium distachyon BRADI_1g11450v3 R-BDI-1125564 BRADI_1g11450v3 [cytosol] R-BDI-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119443 Ammonia assimilation cycle none Brachypodium distachyon BRADI_1g11490v3 R-BDI-1127031-2 BRADI_1g11490v3 [cytosol] R-BDI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119460 Isoleucine biosynthesis from threonine none Brachypodium distachyon BRADI_1g12330v3 R-BDI-6787127 BRADI_1g12330v3 [nucleoplasm] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g12330v3 R-BDI-6787052 BRADI_1g12330v3 [cytosol] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g12820v3 R-BDI-9622269 BRADI_1g12820v3 [plasma membrane] R-BDI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9035605 Regulation of seed size none Brachypodium distachyon BRADI_1g12860v3 R-BDI-9025728 BRADI_1g12860v3 [plasma membrane] R-BDI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9025727 Iron uptake and transport in root vascular system none Brachypodium distachyon BRADI_1g12870v3 R-BDI-6788149 BRADI_1g12870v3 [cytosol] R-BDI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6788019 Salicylic acid signaling none Brachypodium distachyon BRADI_1g13760v3 R-BDI-5221144 BRADI_1g13760v3 [plastid] R-BDI-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119374 Abscisic acid biosynthesis none Brachypodium distachyon BRADI_1g13827v3 R-BDI-5631953 BRADI_1g13827v3 [mitochondrial matrix] R-BDI-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119289 Arginine degradation none Brachypodium distachyon BRADI_1g13827v3 R-BDI-1124214 BRADI_1g13827v3 [cytosol] R-BDI-1119318 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119318 Proline biosynthesis V (from arginine) none Brachypodium distachyon BRADI_1g13827v3 R-BDI-1124214 BRADI_1g13827v3 [cytosol] R-BDI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119610 Biotin biosynthesis II none Brachypodium distachyon BRADI_1g14240v3 R-BDI-1122892 BRADI_1g14240v3 [nucleoplasm] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_1g14240v3 R-BDI-1122892 BRADI_1g14240v3 [nucleoplasm] R-BDI-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9030557 Lateral root initiation none Brachypodium distachyon BRADI_1g14590v3 R-BDI-5138500 BRADI_1g14590v3 [plastid stroma] R-BDI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119263 Arginine biosynthesis none Brachypodium distachyon BRADI_1g14590v3 R-BDI-1129397 BRADI_1g14590v3 [cytosol] R-BDI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119273 Lysine biosynthesis I none Brachypodium distachyon BRADI_1g14590v3 R-BDI-1129397 BRADI_1g14590v3 [cytosol] R-BDI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119283 Lysine biosynthesis II none Brachypodium distachyon BRADI_1g14590v3 R-BDI-1129397 BRADI_1g14590v3 [cytosol] R-BDI-1119295 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119295 Homoserine biosynthesis none Brachypodium distachyon BRADI_1g14590v3 R-BDI-5138500 BRADI_1g14590v3 [plastid stroma] R-BDI-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119539 Ornithine biosynthesis none Brachypodium distachyon BRADI_1g14590v3 R-BDI-5138500 BRADI_1g14590v3 [plastid stroma] R-BDI-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119622 Arginine biosynthesis II (acetyl cycle) none Brachypodium distachyon BRADI_1g14720v3 R-BDI-4415055 BRADI_1g14720v3 [cytosol] R-BDI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-3899351 Abscisic acid (ABA) mediated signaling none Brachypodium distachyon BRADI_1g14720v3 R-BDI-4415073 phospho-BRADI_1g14720v3 [cytosol] R-BDI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-3899351 Abscisic acid (ABA) mediated signaling none Brachypodium distachyon BRADI_1g14720v3 R-BDI-4415055 BRADI_1g14720v3 [cytosol] R-BDI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9639861 Development of root hair none Brachypodium distachyon BRADI_1g14790v3 R-BDI-1129390 BRADI_1g14790v3 [mitochondrion] R-BDI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119506 tyrosine degradation I none Brachypodium distachyon BRADI_1g14870v3 R-BDI-9609608-3 BRADI_1g14870v3 [cytosol] R-BDI-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9609573 Tricin biosynthesis none Brachypodium distachyon BRADI_1g14870v3 R-BDI-9916171-3 OsOMT [cytosol] R-BDI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9916190 Root angle formation: elongation and curvature response none Brachypodium distachyon BRADI_1g14870v3 R-BDI-9916312-3 OsOMT [nucleoplasm] R-BDI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9916190 Root angle formation: elongation and curvature response none Brachypodium distachyon BRADI_1g15050v3 R-BDI-9681910 BRADI_1g15050v3 [Golgi membrane] R-BDI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119574 UDP-L-arabinose biosynthesis and transport none Brachypodium distachyon BRADI_1g15126v3 R-BDI-5654755 BRADI_1g15126v3 [cytosol] R-BDI-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119393 Asparagine degradation I none Brachypodium distachyon BRADI_1g15130v3 R-BDI-5654755-2 BRADI_1g15130v3 [cytosol] R-BDI-1119393 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119393 Asparagine degradation I none Brachypodium distachyon BRADI_1g15350v3 R-BDI-9639016 BRADI_1g15350v3 [cytosol] R-BDI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119410 Ascorbate biosynthesis none Brachypodium distachyon BRADI_1g15350v3 R-BDI-9639016 BRADI_1g15350v3 [cytosol] R-BDI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119434 Phytic acid biosynthesis (lipid-independent) none Brachypodium distachyon BRADI_1g15695v3 R-BDI-1122454 BRADI_1g15695v3 [cytosol] R-BDI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119486 IAA biosynthesis I none Brachypodium distachyon BRADI_1g15800v3 R-BDI-1129600 BRADI_1g15800v3 [cytosol] R-BDI-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119407 Ureide biosynthesis none Brachypodium distachyon BRADI_1g15840v3 R-BDI-1127526 BRADI_1g15840v3 [cytosol] R-BDI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119332 Jasmonic acid biosynthesis none Brachypodium distachyon BRADI_1g16490v3 R-BDI-8933718 BRADI_1g16490v3 [nucleoplasm] R-BDI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8933811 Circadian rhythm none Brachypodium distachyon BRADI_1g16490v3 R-BDI-8933718 BRADI_1g16490v3 [nucleoplasm] R-BDI-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9928946 Drought escape (DE) via ABA-independent pathway none Brachypodium distachyon BRADI_1g16517v3 R-BDI-1126883 BRADI_1g16517v3 [cytosol] R-BDI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119389 Phenylalanine biosynthesis I none Brachypodium distachyon BRADI_1g16580v3 R-BDI-1129616 BRADI_1g16580v3 [cytosol] R-BDI-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119300 Glycolipid desaturation none Brachypodium distachyon BRADI_1g16660v3 R-BDI-9025290 BRADI_1g16660v3 [cytosol] R-BDI-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119267 Phenylalanine degradation III none Brachypodium distachyon BRADI_1g16660v3 R-BDI-1127774 BRADI_1g16660v3 [cytosol] R-BDI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119460 Isoleucine biosynthesis from threonine none Brachypodium distachyon BRADI_1g16660v3 R-BDI-1127774 BRADI_1g16660v3 [cytosol] R-BDI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119486 IAA biosynthesis I none Brachypodium distachyon BRADI_1g16660v3 R-BDI-1127774 BRADI_1g16660v3 [cytosol] R-BDI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119600 Valine biosynthesis none Brachypodium distachyon BRADI_1g16770v3 R-BDI-1124234 BRADI_1g16770v3 [cytosol] R-BDI-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119436 Peptidoglycan biosynthesis I none Brachypodium distachyon BRADI_1g17090v3 R-BDI-9025758 BRADI_1g17090v3 [cytosol] R-BDI-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9025754 Mugineic acid biosynthesis none Brachypodium distachyon BRADI_1g17180v3 R-BDI-1124404 BRADI_1g17180v3 [cytosol] R-BDI-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119322 Leucodelphinidin biosynthesis none Brachypodium distachyon BRADI_1g17180v3 R-BDI-1124404 BRADI_1g17180v3 [cytosol] R-BDI-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Brachypodium distachyon BRADI_1g17210v3 R-BDI-6788050 BRADI_1g17210v3 [nucleoplasm] R-BDI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6788019 Salicylic acid signaling none Brachypodium distachyon BRADI_1g17250v3 R-BDI-9927865 BRADI_1g17250v3 [nucleoplasm] R-BDI-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8934257 Transition from vegetative to reproductive shoot apical meristem none Brachypodium distachyon BRADI_1g17290v3 R-BDI-6787254 BRADI_1g17290v3 [cytosol] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g17290v3 R-BDI-6787112 BRADI_1g17290v3 [nucleoplasm] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g17340v3 R-BDI-1128989 BRADI_1g17340v3 [plastid stroma] R-BDI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119509 Histidine biosynthesis I none Brachypodium distachyon BRADI_1g17884v3 R-BDI-1123489 BRADI_1g17884v3 [cytosol] R-BDI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119370 Sterol biosynthesis none Brachypodium distachyon BRADI_1g17961v3 R-BDI-9826657 BRADI_1g17961v3 [nucleoplasm] R-BDI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brachypodium distachyon BRADI_1g18340v3 R-BDI-1124206 BRADI_1g18340v3 [cytosol] R-BDI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119403 Removal of superoxide radicals none Brachypodium distachyon BRADI_1g18340v3 R-BDI-1124206 BRADI_1g18340v3 [cytosol] R-BDI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brachypodium distachyon BRADI_1g18407v3 R-BDI-8934069 BRADI_1g18407v3 [nucleoplasm] R-BDI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8934036 Long day regulated expression of florigens none Brachypodium distachyon BRADI_1g18407v3 R-BDI-8934069 BRADI_1g18407v3 [nucleoplasm] R-BDI-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8934108 Short day regulated expression of florigens none Brachypodium distachyon BRADI_1g18550v3 R-BDI-1123477 BRADI_1g18550v3 [cytosol] R-BDI-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119451 Xylose degradation none Brachypodium distachyon BRADI_1g18800v3 R-BDI-1129311 BRADI_1g18800v3 [cytosol] R-BDI-1119573 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119573 Dolichyl-diphosphooligosaccharide biosynthesis none Brachypodium distachyon BRADI_1g19080v3 R-BDI-5603891 BRADI_1g19080v3 [plastid stroma] R-BDI-1119420 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119420 Glutamate biosynthesis V none Brachypodium distachyon BRADI_1g19080v3 R-BDI-1125410 BRADI_1g19080v3 [chloroplast stroma] R-BDI-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119443 Ammonia assimilation cycle none Brachypodium distachyon BRADI_1g19100v3 R-BDI-9611465 BRADI_1g19100v3 [nucleoplasm] R-BDI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brachypodium distachyon BRADI_1g19100v3 R-BDI-9611445 BRADI_1g19100v3 [nucleoplasm] R-BDI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brachypodium distachyon BRADI_1g19920v3 R-BDI-1130302 BRADI_1g19920v3 [cytosol] R-BDI-1119451 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119451 Xylose degradation none Brachypodium distachyon BRADI_1g20550v3 R-BDI-9640752 BRADI_1g20550v3 [nucleoplasm] R-BDI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9640882 Assembly of pre-replication complex none Brachypodium distachyon BRADI_1g20550v3 R-BDI-9640752 BRADI_1g20550v3 [nucleoplasm] R-BDI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9645850 Activation of pre-replication complex none Brachypodium distachyon BRADI_1g20610v3 R-BDI-9025443 BRADI_1g20610v3 [endoplasmic reticulum membrane] R-BDI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119325 Sphingolipid metabolism none Brachypodium distachyon BRADI_1g20870v3 R-BDI-8987499 BRADI_1g20870v3 [peroxisomal matrix] R-BDI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119312 Photorespiration none Brachypodium distachyon BRADI_1g20870v3 R-BDI-1130222 BRADI_1g20870v3 [cytosol] R-BDI-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119596 Glutamate biosynthesis I none Brachypodium distachyon BRADI_1g20890v3 R-BDI-1129561 BRADI_1g20890v3 [cytosol] R-BDI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119452 Galactose degradation II none Brachypodium distachyon BRADI_1g20890v3 R-BDI-1129561 BRADI_1g20890v3 [cytosol] R-BDI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119465 Sucrose biosynthesis none Brachypodium distachyon BRADI_1g21050v3 R-BDI-1129585 BRADI_1g21050v3 [cytosol] R-BDI-1119265 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119265 Tetrahydrofolate biosynthesis I none Brachypodium distachyon BRADI_1g21050v3 R-BDI-1129585 BRADI_1g21050v3 [cytosol] R-BDI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119523 Tetrahydrofolate biosynthesis II none Brachypodium distachyon BRADI_1g21330v3 R-BDI-1122845 BRADI_1g21330v3 [plastid stroma] R-BDI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119430 Chorismate biosynthesis none Brachypodium distachyon BRADI_1g21440v3 R-BDI-5606478-2 BRADI_1g21440v3 [plastid stroma] R-BDI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119419 Lysine biosynthesis VI none Brachypodium distachyon BRADI_1g21490v3 R-BDI-5679443 BRADI_1g21490v3 [nucleoplasm] R-BDI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5679411 Gibberellin signaling none Brachypodium distachyon BRADI_1g21490v3 R-BDI-5679443 BRADI_1g21490v3 [nucleoplasm] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g21490v3 R-BDI-6787090 BRADI_1g21490v3 [cytosol] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g21580v3 R-BDI-1123534 BRADI_1g21580v3 [cytosol] R-BDI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119438 Secologanin and strictosidine biosynthesis none Brachypodium distachyon BRADI_1g21990v3 R-BDI-9681895 BRADI_1g21990v3 [Golgi membrane] R-BDI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119574 UDP-L-arabinose biosynthesis and transport none Brachypodium distachyon BRADI_1g22180v3 R-BDI-6787141 BRADI_1g22180v3 [nucleoplasm] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g22850v3 R-BDI-1123819 BRADI_1g22850v3 [plastid stroma] R-BDI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119464 Methylerythritol phosphate pathway none Brachypodium distachyon BRADI_1g23550v3 R-BDI-5632334 BRADI_1g23550v3 [nucleoplasm] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_1g23550v3 R-BDI-5632197 phospho-BRADI_1g23550v3 [nucleoplasm] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_1g23550v3 R-BDI-5632183 phospho-BRADI_1g23550v3 [cytosol] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_1g23550v3 R-BDI-5632334 BRADI_1g23550v3 [nucleoplasm] R-BDI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5679411 Gibberellin signaling none Brachypodium distachyon BRADI_1g23600v3 R-BDI-1125237 BRADI_1g23600v3 [mitochondrial matrix] R-BDI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119533 TCA cycle (plant) none Brachypodium distachyon BRADI_1g24010v3 R-BDI-9658656 BRADI_1g24010v3 [cytosol] R-BDI-1119271 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119271 Threonine degradation none Brachypodium distachyon BRADI_1g24010v3 R-BDI-9658656 BRADI_1g24010v3 [cytosol] R-BDI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119486 IAA biosynthesis I none Brachypodium distachyon BRADI_1g24010v3 R-BDI-9658656 BRADI_1g24010v3 [cytosol] R-BDI-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119567 Beta-alanine biosynthesis I none Brachypodium distachyon BRADI_1g24830v3 R-BDI-9025789 BRADI_1g24830v3 [cytosol] R-BDI-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9025754 Mugineic acid biosynthesis none Brachypodium distachyon BRADI_1g24840v3 R-BDI-1128178-2 BRADI_1g24840v3 [cytosol] R-BDI-1119322 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119322 Leucodelphinidin biosynthesis none Brachypodium distachyon BRADI_1g24840v3 R-BDI-1128178-2 BRADI_1g24840v3 [cytosol] R-BDI-1119415 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119415 Leucopelargonidin and leucocyanidin biosynthesis none Brachypodium distachyon BRADI_1g24840v3 R-BDI-9609575-2 BRADI_1g24840v3 [endoplasmic reticulum membrane] R-BDI-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9609573 Tricin biosynthesis none Brachypodium distachyon BRADI_1g25350v3 R-BDI-1129816 BRADI_1g25350v3 [plastid stroma] R-BDI-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119367 Polyisoprenoid biosynthesis none Brachypodium distachyon BRADI_1g25350v3 R-BDI-1129816 BRADI_1g25350v3 [plastid stroma] R-BDI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119615 Mevalonate pathway none Brachypodium distachyon BRADI_1g25790v3 R-BDI-1125494 BRADI_1g25790v3 [endoplasmic reticulum membrane] R-BDI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119402 Phospholipid biosynthesis I none Brachypodium distachyon BRADI_1g26000v3 R-BDI-9918206 BRADI_1g26000v3 [amyloplast] R-BDI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119477 Starch biosynthesis none Brachypodium distachyon BRADI_1g26050v3 R-BDI-1122433 BRADI_1g26050v3 [mitochondrial inner membrane] R-BDI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119533 TCA cycle (plant) none Brachypodium distachyon BRADI_1g26670v3 R-BDI-9638996 BRADI_1g26670v3 [cytosol] R-BDI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119434 Phytic acid biosynthesis (lipid-independent) none Brachypodium distachyon BRADI_1g26720v3 R-BDI-9035727 BRADI_1g26720v3 [cytosol] R-BDI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9035605 Regulation of seed size none Brachypodium distachyon BRADI_1g26720v3 R-BDI-9035692 BRADI_1g26720v3 [nucleoplasm] R-BDI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9035605 Regulation of seed size none Brachypodium distachyon BRADI_1g26940v3 R-BDI-9675357 BRADI_1g26940v3 [nucleoplasm] R-BDI-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9030680 Crown root development none Brachypodium distachyon BRADI_1g27000v3 R-BDI-5146760 BRADI_1g27000v3 [mitochondrial matrix] R-BDI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119533 TCA cycle (plant) none Brachypodium distachyon BRADI_1g27050v3 R-BDI-8933730 BRADI_1g27050v3 [nucleoplasm] R-BDI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8933811 Circadian rhythm none Brachypodium distachyon BRADI_1g27060v3 R-BDI-9658589 BRADI_1g27060v3 [endoplasmic reticulum lumen] R-BDI-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119502 Allantoin degradation none Brachypodium distachyon BRADI_1g27460v3 R-BDI-1123575 BRADI_1g27460v3 [cytosol] R-BDI-1119297 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119297 Beta-alanine biosynthesis III none Brachypodium distachyon BRADI_1g27980v3 R-BDI-1122433-2 BRADI_1g27980v3 [mitochondrial inner membrane] R-BDI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119533 TCA cycle (plant) none Brachypodium distachyon BRADI_1g28780v3 R-BDI-9618056 BRADI_1g28780v3 [plasma membrane] R-BDI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9618218 Arsenic uptake and detoxification none Brachypodium distachyon BRADI_1g28790v3 R-BDI-9918201 BRADI_1g28790v3 [amyloplast] R-BDI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119477 Starch biosynthesis none Brachypodium distachyon BRADI_1g28960v3 R-BDI-1122881 BRADI_1g28960v3 [cytosol] R-BDI-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Brachypodium distachyon BRADI_1g28960v3 R-BDI-1122881 BRADI_1g28960v3 [cytosol] R-BDI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119438 Secologanin and strictosidine biosynthesis none Brachypodium distachyon BRADI_1g28960v3 R-BDI-1122881 BRADI_1g28960v3 [cytosol] R-BDI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119486 IAA biosynthesis I none Brachypodium distachyon BRADI_1g29020v3 R-BDI-1128322 BRADI_1g29020v3 [cytosol] R-BDI-1119384 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119384 NAD biosynthesis I (from aspartate) none Brachypodium distachyon BRADI_1g29570v3 R-BDI-1128815 BRADI_1g29570v3 [cytosol] R-BDI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119452 Galactose degradation II none Brachypodium distachyon BRADI_1g29570v3 R-BDI-1128815 BRADI_1g29570v3 [cytosol] R-BDI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119465 Sucrose biosynthesis none Brachypodium distachyon BRADI_1g29590v3 R-BDI-1124861 BRADI_1g29590v3 [plastid stroma] R-BDI-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119449 Carotenoid biosynthesis none Brachypodium distachyon BRADI_1g29850v3 R-BDI-9918274 SBE1 [amyloplast] R-BDI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119477 Starch biosynthesis none Brachypodium distachyon BRADI_1g29850v3 R-BDI-9626342 BRADI_1g29850v3 [plastid stroma] R-BDI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9626305 Regulatory network of nutrient accumulation none Brachypodium distachyon BRADI_1g30807v3 R-BDI-1125766-3 BRADI_1g30807v3 [cytosol] R-BDI-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119557 GA12 biosynthesis none Brachypodium distachyon BRADI_1g31027v3 R-BDI-1125014 BRADI_1g31027v3 [cytosol] R-BDI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brachypodium distachyon BRADI_1g31530v3 R-BDI-8858085 BRADI_1g31530v3 [plasma membrane] R-BDI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8858053 Polar auxin transport none Brachypodium distachyon BRADI_1g31530v3 R-BDI-8858085 BRADI_1g31530v3 [plasma membrane] R-BDI-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9924494 Gravity sensing and statolith sedimentation none Brachypodium distachyon BRADI_1g31530v3 R-BDI-9928298 PIN2 [endosome] R-BDI-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9924494 Gravity sensing and statolith sedimentation none Brachypodium distachyon BRADI_1g31810v3 R-BDI-3230566 BRADI_1g31810v3 [plastid stroma] R-BDI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119519 Calvin cycle none Brachypodium distachyon BRADI_1g31890v3 R-BDI-9658573 BRADI_1g31890v3 [endoplasmic reticulum lumen] R-BDI-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119502 Allantoin degradation none Brachypodium distachyon BRADI_1g32060v3 R-BDI-6787134 BRADI_1g32060v3 [cytosol] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g32060v3 R-BDI-6787188 BRADI_1g32060v3 [nucleoplasm] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g32087v3 R-BDI-1125920 BRADI_1g32087v3 [cytosol] R-BDI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119273 Lysine biosynthesis I none Brachypodium distachyon BRADI_1g32087v3 R-BDI-1125920 BRADI_1g32087v3 [cytosol] R-BDI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119283 Lysine biosynthesis II none Brachypodium distachyon BRADI_1g32370v3 R-BDI-9826627 OSMPH1 [nucleoplasm] R-BDI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brachypodium distachyon BRADI_1g32547v3 R-BDI-5608154 BRADI_1g32547v3 [nucleoplasm] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_1g32590v3 R-BDI-1128624 BRADI_1g32590v3 [mitochondrial inner membrane] R-BDI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119479 Valine degradation none Brachypodium distachyon BRADI_1g33160v3 R-BDI-5608129 BRADI_1g33160v3 [nucleoplasm] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_1g33430v3 R-BDI-9645838 BRADI_1g33430v3 [nucleoplasm] R-BDI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9645850 Activation of pre-replication complex none Brachypodium distachyon BRADI_1g33430v3 R-BDI-9645838 BRADI_1g33430v3 [nucleoplasm] R-BDI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9675782 Maturation none Brachypodium distachyon BRADI_1g33430v3 R-BDI-9645838 BRADI_1g33430v3 [nucleoplasm] R-BDI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9675885 Lagging strand synthesis none Brachypodium distachyon BRADI_1g33530v3 R-BDI-2685721 BRADI_1g33530v3 [cytosol] R-BDI-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119580 IAA biosynthesis II none Brachypodium distachyon BRADI_1g33610v3 R-BDI-8933763 BRADI_1g33610v3 [nucleoplasm] R-BDI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8933811 Circadian rhythm none Brachypodium distachyon BRADI_1g33777v3 R-BDI-9639211 BRADI_1g33777v3 [plant-type vacuole membrane] R-BDI-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9639136 Response to Aluminum stress none Brachypodium distachyon BRADI_1g34180v3 R-BDI-3240749 BRADI_1g34180v3 [cytosol] R-BDI-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Brachypodium distachyon BRADI_1g34180v3 R-BDI-9681918 BRADI_1g34180v3 [cytosol] R-BDI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119574 UDP-L-arabinose biosynthesis and transport none Brachypodium distachyon BRADI_1g34340v3 R-BDI-9675269 BRADI_1g34340v3 [nucleoplasm] R-BDI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9030654 Primary root development none Brachypodium distachyon BRADI_1g34507v3 R-BDI-5632143 BRADI_1g34507v3 [nucleoplasm] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_1g34507v3 R-BDI-5632143 BRADI_1g34507v3 [nucleoplasm] R-BDI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9924451 Shoot (tiller) formation and regulation of tiller angle none Brachypodium distachyon BRADI_1g34513v3 R-BDI-4827046 BRADI_1g34513v3 [plastid stroma] R-BDI-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-4827054 Tetrapyrrole biosynthesis I none Brachypodium distachyon BRADI_1g35600v3 R-BDI-1126400 BRADI_1g35600v3 [chloroplast] R-BDI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119494 Tryptophan biosynthesis none Brachypodium distachyon BRADI_1g35940v3 R-BDI-1125277 BRADI_1g35940v3 [cytosol] R-BDI-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119278 PRPP biosynthesis I none Brachypodium distachyon BRADI_1g36260v3 R-BDI-5149694 BRADI_1g36260v3 [plastid stroma] R-BDI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119519 Calvin cycle none Brachypodium distachyon BRADI_1g36580v3 R-BDI-1127170 BRADI_1g36580v3 [cytosol] R-BDI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119276 Choline biosynthesis III none Brachypodium distachyon BRADI_1g37290v3 R-BDI-6787012 BRADI_1g37290v3 [nucleoplasm] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g37360v3 R-BDI-5632120 BRADI_1g37360v3 [nucleoplasm] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_1g37547v3 R-BDI-2731026-2 BRADI_1g37547v3 [endoplasmic reticulum membrane] R-BDI-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119557 GA12 biosynthesis none Brachypodium distachyon BRADI_1g37547v3 R-BDI-1130405-2 BRADI_1g37547v3 [endoplasmic reticulum membrane] R-BDI-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119557 GA12 biosynthesis none Brachypodium distachyon BRADI_1g37560v3 R-BDI-2731026-3 BRADI_1g37560v3 [endoplasmic reticulum membrane] R-BDI-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119557 GA12 biosynthesis none Brachypodium distachyon BRADI_1g37560v3 R-BDI-1130405-3 BRADI_1g37560v3 [endoplasmic reticulum membrane] R-BDI-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119557 GA12 biosynthesis none Brachypodium distachyon BRADI_1g37576v3 R-BDI-2731026 BRADI_1g37576v3 [endoplasmic reticulum membrane] R-BDI-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119557 GA12 biosynthesis none Brachypodium distachyon BRADI_1g37576v3 R-BDI-1130405 BRADI_1g37576v3 [endoplasmic reticulum membrane] R-BDI-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119557 GA12 biosynthesis none Brachypodium distachyon BRADI_1g37870v3 R-BDI-1127523 BRADI_1g37870v3 [cytosol] R-BDI-1119431 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119431 UDP-D-glucuronate biosynthesis (from myo-inositol) none Brachypodium distachyon BRADI_1g38280v3 R-BDI-1128914 BRADI_1g38280v3 [cytosol] R-BDI-1119281 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119281 Aspartate biosynthesis I none Brachypodium distachyon BRADI_1g38280v3 R-BDI-5632008 BRADI_1g38280v3 [plastid stroma] R-BDI-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119553 Asparagine biosynthesis none Brachypodium distachyon BRADI_1g38687v3 R-BDI-1123059 BRADI_1g38687v3 [cytosol] R-BDI-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119317 Spermine biosynthesis none Brachypodium distachyon BRADI_1g38687v3 R-BDI-1123059 BRADI_1g38687v3 [cytosol] R-BDI-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119343 Spermidine biosynthesis none Brachypodium distachyon BRADI_1g39206v3 R-BDI-8987535-4 BRADI_1g39206v3 [chloroplast] R-BDI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119312 Photorespiration none Brachypodium distachyon BRADI_1g39270v3 R-BDI-5654827 BRADI_1g39270v3 [nucleoplasm] R-BDI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5654828 Strigolactone signaling none Brachypodium distachyon BRADI_1g41740v3 R-BDI-1129547 BRADI_1g41740v3 [cytosol] R-BDI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119389 Phenylalanine biosynthesis I none Brachypodium distachyon BRADI_1g41740v3 R-BDI-1129547 BRADI_1g41740v3 [cytosol] R-BDI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119400 Methionine biosynthesis II none Brachypodium distachyon BRADI_1g41740v3 R-BDI-1129547 BRADI_1g41740v3 [cytosol] R-BDI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119506 tyrosine degradation I none Brachypodium distachyon BRADI_1g41957v3 R-BDI-9918159 BRADI_1g41957v3 [amyloplast] R-BDI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119477 Starch biosynthesis none Brachypodium distachyon BRADI_1g41970v3 R-BDI-1122403 BRADI_1g41970v3 [amyloplast] R-BDI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119477 Starch biosynthesis none Brachypodium distachyon BRADI_1g42620v3 R-BDI-1130152 BRADI_1g42620v3 [cytosol] R-BDI-1119394 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119394 Pantothenate and coenzyme A biosynthesis III none Brachypodium distachyon BRADI_1g43670v3 R-BDI-8934168 BRADI_1g43670v3 [nucleoplasm] R-BDI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8934036 Long day regulated expression of florigens none Brachypodium distachyon BRADI_1g43670v3 R-BDI-8934168 BRADI_1g43670v3 [nucleoplasm] R-BDI-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8934108 Short day regulated expression of florigens none Brachypodium distachyon BRADI_1g43670v3 R-BDI-9920270 BRADI_1g43670v3 [nucleoplasm] R-BDI-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8934108 Short day regulated expression of florigens none Brachypodium distachyon BRADI_1g43670v3 R-BDI-8934168 BRADI_1g43670v3 [nucleoplasm] R-BDI-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9928946 Drought escape (DE) via ABA-independent pathway none Brachypodium distachyon BRADI_1g43770v3 R-BDI-1128334 BRADI_1g43770v3 [mitochondrial matrix] R-BDI-1119337 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119337 Proline degradation none Brachypodium distachyon BRADI_1g43990v3 R-BDI-9826604 BRADI_1g43990v3 [nucleoplasm] R-BDI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brachypodium distachyon BRADI_1g44060v3 R-BDI-5149644 BRADI_1g44060v3 [plastid stroma] R-BDI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119519 Calvin cycle none Brachypodium distachyon BRADI_1g45020v3 R-BDI-1124759 BRADI_1g45020v3 [endosome] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_1g45020v3 R-BDI-5679306 BRADI_1g45020v3 [plasma membrane] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_1g45130v3 R-BDI-9918260 soluble Starch Synthase (SSII-3/SSIIa) [amyloplast] R-BDI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119477 Starch biosynthesis none Brachypodium distachyon BRADI_1g45200v3 R-BDI-9618126 BRADI_1g45200v3 [plasma membrane] R-BDI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9618218 Arsenic uptake and detoxification none Brachypodium distachyon BRADI_1g45304v3 R-BDI-1122651 BRADI_1g45304v3 [plastid stroma] R-BDI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119430 Chorismate biosynthesis none Brachypodium distachyon BRADI_1g46020v3 R-BDI-5655090-2 BRADI_1g46020v3 [Golgi lumen] R-BDI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5655101 Xyloglucan biosynthesis none Brachypodium distachyon BRADI_1g46030v3 R-BDI-5655100 BRADI_1g46030v3 [Golgi lumen] R-BDI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5655101 Xyloglucan biosynthesis none Brachypodium distachyon BRADI_1g46200v3 R-BDI-9611524 LYP6 [plasma membrane] R-BDI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brachypodium distachyon BRADI_1g46440v3 R-BDI-8854458 BRADI_1g46440v3 [cytosol] R-BDI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119276 Choline biosynthesis III none Brachypodium distachyon BRADI_1g46602v3 R-BDI-5608125 BRADI_1g46602v3 [nucleoplasm] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_1g46670v3 R-BDI-1124377 BRADI_1g46670v3 [cytosol] R-BDI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119452 Galactose degradation II none Brachypodium distachyon BRADI_1g46670v3 R-BDI-1124377 BRADI_1g46670v3 [cytosol] R-BDI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119465 Sucrose biosynthesis none Brachypodium distachyon BRADI_1g46880v3 R-BDI-9675335 BRADI_1g46880v3 [mitochondrial matrix] R-BDI-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9675508 Root elongation none Brachypodium distachyon BRADI_1g47000v3 R-BDI-1125911 BRADI_1g47000v3 [cytosol] R-BDI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119428 GDP-D-rhamnose biosynthesis none Brachypodium distachyon BRADI_1g47000v3 R-BDI-1125911 BRADI_1g47000v3 [cytosol] R-BDI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brachypodium distachyon BRADI_1g47050v3 R-BDI-9640675 BRADI_1g47050v3 [nucleoplasm] R-BDI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9640882 Assembly of pre-replication complex none Brachypodium distachyon BRADI_1g47050v3 R-BDI-9640675 BRADI_1g47050v3 [nucleoplasm] R-BDI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9645850 Activation of pre-replication complex none Brachypodium distachyon BRADI_1g47140v3 R-BDI-1128173 BRADI_1g47140v3 [cytosol] R-BDI-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119437 Glutathione redox reactions I none Brachypodium distachyon BRADI_1g47480v3 R-BDI-9675476 BRADI_1g47480v3 [nucleoplasm] R-BDI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9030654 Primary root development none Brachypodium distachyon BRADI_1g47650v3 R-BDI-5606478 BRADI_1g47650v3 [plastid stroma] R-BDI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119419 Lysine biosynthesis VI none Brachypodium distachyon BRADI_1g47860v3 R-BDI-1129485 BRADI_1g47860v3 [cytosol] R-BDI-1119341 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119341 Galactosylcyclitol biosynthesis none Brachypodium distachyon BRADI_1g47910v3 R-BDI-1125261 BRADI_1g47910v3 R-BDI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119400 Methionine biosynthesis II none Brachypodium distachyon BRADI_1g48320v3 R-BDI-8879009 BRADI_1g48320v3 [nucleoplasm] R-BDI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8879007 Response to cold temperature none Brachypodium distachyon BRADI_1g48610v3 R-BDI-1128586 BRADI_1g48610v3 [amyloplast] R-BDI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119477 Starch biosynthesis none Brachypodium distachyon BRADI_1g48830v3 R-BDI-8934025 BRADI_1g48830v3 [nucleoplasm] R-BDI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8934036 Long day regulated expression of florigens none Brachypodium distachyon BRADI_1g48830v3 R-BDI-8934025 BRADI_1g48830v3 [nucleoplasm] R-BDI-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8934108 Short day regulated expression of florigens none Brachypodium distachyon BRADI_1g48830v3 R-BDI-8934025 BRADI_1g48830v3 [nucleoplasm] R-BDI-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8934257 Transition from vegetative to reproductive shoot apical meristem none Brachypodium distachyon BRADI_1g48830v3 R-BDI-9684733 BRADI_1g48830v3 [cytosol] R-BDI-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8934257 Transition from vegetative to reproductive shoot apical meristem none Brachypodium distachyon BRADI_1g48830v3 R-BDI-9684733 BRADI_1g48830v3 [cytosol] R-BDI-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9609102 Flower development none Brachypodium distachyon BRADI_1g48830v3 R-BDI-8934025 BRADI_1g48830v3 [nucleoplasm] R-BDI-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9928946 Drought escape (DE) via ABA-independent pathway none Brachypodium distachyon BRADI_1g48830v3 R-BDI-8934025 BRADI_1g48830v3 [nucleoplasm] R-BDI-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9928995 Drought escape (DE) via ABA-dependent pathway none Brachypodium distachyon BRADI_1g49100v3 R-BDI-9675391 BRADI_1g49100v3 [nucleoplasm] R-BDI-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9675508 Root elongation none Brachypodium distachyon BRADI_1g49120v3 R-BDI-5654840 BRADI_1g49120v3 [nucleoplasm] R-BDI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5654828 Strigolactone signaling none Brachypodium distachyon BRADI_1g49120v3 R-BDI-5654840 BRADI_1g49120v3 [nucleoplasm] R-BDI-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Brachypodium distachyon BRADI_1g49560v3 R-BDI-8879085 BRADI_1g49560v3 [nucleoplasm] R-BDI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8879007 Response to cold temperature none Brachypodium distachyon BRADI_1g49570v3 R-BDI-8879085-2 BRADI_1g49570v3 [nucleoplasm] R-BDI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8879007 Response to cold temperature none Brachypodium distachyon BRADI_1g49630v3 R-BDI-5632261 BRADI_1g49630v3 [nucleoplasm] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_1g50067v3 R-BDI-1123832 BRADI_1g50067v3 [cytosol] R-BDI-1119304 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119304 Putrescine biosynthesis II none Brachypodium distachyon BRADI_1g50067v3 R-BDI-1123832 BRADI_1g50067v3 [cytosol] R-BDI-1119447 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119447 Putrescine biosynthesis I none Brachypodium distachyon BRADI_1g50090v3 R-BDI-9918210 granule-bound starch synthase 1 (GBSSI, or Waxy) [amyloplast] R-BDI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119477 Starch biosynthesis none Brachypodium distachyon BRADI_1g50090v3 R-BDI-9626344 BRADI_1g50090v3 [plastid stroma] R-BDI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9626305 Regulatory network of nutrient accumulation none Brachypodium distachyon BRADI_1g50170v3 R-BDI-1123609 BRADI_1g50170v3 [plasma membrane] R-BDI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119314 Cellulose biosynthesis none Brachypodium distachyon BRADI_1g50550v3 R-BDI-1125399 BRADI_1g50550v3 [plastid] R-BDI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119403 Removal of superoxide radicals none Brachypodium distachyon BRADI_1g51140v3 R-BDI-1129355 BRADI_1g51140v3 [plastid] R-BDI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119403 Removal of superoxide radicals none Brachypodium distachyon BRADI_1g51377v3 R-BDI-8868888 BRADI_1g51377v3 [endoplasmic reticulum membrane] R-BDI-8868949 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8868949 Intracellular auxin transport none Brachypodium distachyon BRADI_1g51460v3 R-BDI-1129282 BRADI_1g51460v3 [cytosol] R-BDI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119428 GDP-D-rhamnose biosynthesis none Brachypodium distachyon BRADI_1g51460v3 R-BDI-1129282 BRADI_1g51460v3 [cytosol] R-BDI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brachypodium distachyon BRADI_1g51540v3 R-BDI-8878987 BRADI_1g51540v3 [nucleoplasm] R-BDI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8879007 Response to cold temperature none Brachypodium distachyon BRADI_1g51670v3 R-BDI-1130247 BRADI_1g51670v3 [plastid stroma] R-BDI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119519 Calvin cycle none Brachypodium distachyon BRADI_1g51720v3 R-BDI-1123561 BRADI_1g51720v3 [cytosol] R-BDI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119624 Methionine salvage pathway none Brachypodium distachyon BRADI_1g51780v3 R-BDI-1125766-2 BRADI_1g51780v3 [cytosol] R-BDI-1119557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119557 GA12 biosynthesis none Brachypodium distachyon BRADI_1g51990v3 R-BDI-9639892 BRADI_1g51990v3 [cell wall] R-BDI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9639861 Development of root hair none Brachypodium distachyon BRADI_1g52200v3 R-BDI-5608093 BRADI_1g52200v3 [plasma membrane] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_1g52291v3 R-BDI-1127734 BRADI_1g52291v3 [cytosol] R-BDI-1119506 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119506 tyrosine degradation I none Brachypodium distachyon BRADI_1g52557v3 R-BDI-1127254 BRADI_1g52557v3 [cytosol] R-BDI-1119317 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119317 Spermine biosynthesis none Brachypodium distachyon BRADI_1g52557v3 R-BDI-1127254 BRADI_1g52557v3 [cytosol] R-BDI-1119343 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119343 Spermidine biosynthesis none Brachypodium distachyon BRADI_1g52740v3 R-BDI-1250419 BRADI_1g52740v3 [cytosol] R-BDI-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119374 Abscisic acid biosynthesis none Brachypodium distachyon BRADI_1g52740v3 R-BDI-1129637 BRADI_1g52740v3 [cytosol] R-BDI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119486 IAA biosynthesis I none Brachypodium distachyon BRADI_1g53085v3 R-BDI-1124956 BRADI_1g53085v3 [cytosol] R-BDI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119276 Choline biosynthesis III none Brachypodium distachyon BRADI_1g53150v3 R-BDI-9025739 BRADI_1g53150v3 [plasma membrane] R-BDI-9025727 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9025727 Iron uptake and transport in root vascular system none Brachypodium distachyon BRADI_1g53150v3 R-BDI-9025739 BRADI_1g53150v3 [plasma membrane] R-BDI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9618218 Arsenic uptake and detoxification none Brachypodium distachyon BRADI_1g53320v3 R-BDI-2685738 BRADI_1g53320v3 [cytosol] R-BDI-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119580 IAA biosynthesis II none Brachypodium distachyon BRADI_1g53500v3 R-BDI-1129161 BRADI_1g53500v3 [amyloplast] R-BDI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119477 Starch biosynthesis none Brachypodium distachyon BRADI_1g53520v3 R-BDI-1128131 BRADI_1g53520v3 [cytosol] R-BDI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119473 Cytokinins-O-glucoside biosynthesis none Brachypodium distachyon BRADI_1g53527v3 R-BDI-1123860 BRADI_1g53527v3 [cytosol] R-BDI-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119292 Cytokinins 7-N-glucoside biosynthesis none Brachypodium distachyon BRADI_1g53527v3 R-BDI-1123860 BRADI_1g53527v3 [cytosol] R-BDI-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119375 Cytokinins 9-N-glucoside biosynthesis none Brachypodium distachyon BRADI_1g53527v3 R-BDI-1123860 BRADI_1g53527v3 [cytosol] R-BDI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119473 Cytokinins-O-glucoside biosynthesis none Brachypodium distachyon BRADI_1g53560v3 R-BDI-1128396 BRADI_1g53560v3 [cytosol] R-BDI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119473 Cytokinins-O-glucoside biosynthesis none Brachypodium distachyon BRADI_1g53650v3 R-BDI-9608621 BRADI_1g53650v3 [cytosol] R-BDI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9608575 Reproductive meristem phase change none Brachypodium distachyon BRADI_1g53650v3 R-BDI-9608648 BRADI_1g53650v3 [nucleoplasm] R-BDI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9608575 Reproductive meristem phase change none Brachypodium distachyon BRADI_1g54200v3 R-BDI-9675274 BRADI_1g54200v3 [nucleoplasm] R-BDI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9030654 Primary root development none Brachypodium distachyon BRADI_1g54210v3 R-BDI-2885386 BRADI_1g54210v3 [cytosol] R-BDI-1119417 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119417 Stachyose biosynthesis none Brachypodium distachyon BRADI_1g54250v3 R-BDI-1123087 BRADI_1g54250v3 [plasma membrane] R-BDI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119314 Cellulose biosynthesis none Brachypodium distachyon BRADI_1g54305v3 R-BDI-1126307-2 BRADI_1g54305v3 [cytosol] R-BDI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119370 Sterol biosynthesis none Brachypodium distachyon BRADI_1g54390v3 R-BDI-1125038 BRADI_1g54390v3 [plastid stroma] R-BDI-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119449 Carotenoid biosynthesis none Brachypodium distachyon BRADI_1g54610v3 R-BDI-1123046 BRADI_1g54610v3 [cytosol] R-BDI-1119386 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119386 UDP-N-acetylgalactosamine biosynthesis none Brachypodium distachyon BRADI_1g54890v3 R-BDI-4723663 BRADI_1g54890v3 [plastid stroma] R-BDI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119464 Methylerythritol phosphate pathway none Brachypodium distachyon BRADI_1g54890v3 R-BDI-1126491 BRADI_1g54890v3 [cytosol] R-BDI-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119594 Pyridoxal 5'-phosphate biosynthesis none Brachypodium distachyon BRADI_1g54890v3 R-BDI-1126491 BRADI_1g54890v3 [cytosol] R-BDI-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119629 Thiamine biosynthesis none Brachypodium distachyon BRADI_1g54940v3 R-BDI-1126269 BRADI_1g54940v3 [mitochondrial matrix] R-BDI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119479 Valine degradation none Brachypodium distachyon BRADI_1g54950v3 R-BDI-5655007 BRADI_1g54950v3 [Golgi lumen] R-BDI-5655010 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5655010 Xylogalacturonan biosynthesis none Brachypodium distachyon BRADI_1g55300v3 R-BDI-1127089 BRADI_1g55300v3 [cytosol] R-BDI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119465 Sucrose biosynthesis none Brachypodium distachyon BRADI_1g55440v3 R-BDI-1128354 BRADI_1g55440v3 [chloroplast] R-BDI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119494 Tryptophan biosynthesis none Brachypodium distachyon BRADI_1g55514v3 R-BDI-1122287-12 BRADI_1g55514v3 [cytosol] R-BDI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119438 Secologanin and strictosidine biosynthesis none Brachypodium distachyon BRADI_1g55740v3 R-BDI-1127705 BRADI_1g55740v3 [plastid stroma] R-BDI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119519 Calvin cycle none Brachypodium distachyon BRADI_1g56150v3 R-BDI-9611864 BRADI_1g56150v3 [mitochondrial matrix] R-BDI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119479 Valine degradation none Brachypodium distachyon BRADI_1g56532v3 R-BDI-1122287-2 BRADI_1g56532v3 [cytosol] R-BDI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119438 Secologanin and strictosidine biosynthesis none Brachypodium distachyon BRADI_1g56930v3 R-BDI-1127467-2 BRADI_1g56930v3 [cytosol] R-BDI-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119456 Brassinosteroid biosynthesis II none Brachypodium distachyon BRADI_1g56937v3 R-BDI-1127467 BRADI_1g56937v3 [cytosol] R-BDI-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119456 Brassinosteroid biosynthesis II none Brachypodium distachyon BRADI_1g57132v3 R-BDI-1122287-9 BRADI_1g57132v3 [cytosol] R-BDI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119438 Secologanin and strictosidine biosynthesis none Brachypodium distachyon BRADI_1g57607v3 R-BDI-9826652 OSH15 [nucleoplasm] R-BDI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brachypodium distachyon BRADI_1g57930v3 R-BDI-1129247 BRADI_1g57930v3 [mitochondrial inner membrane] R-BDI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119533 TCA cycle (plant) none Brachypodium distachyon BRADI_1g58080v3 R-BDI-1125489 BRADI_1g58080v3 [Golgi membrane] R-BDI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119428 GDP-D-rhamnose biosynthesis none Brachypodium distachyon BRADI_1g58080v3 R-BDI-1125489 BRADI_1g58080v3 [Golgi membrane] R-BDI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119574 UDP-L-arabinose biosynthesis and transport none Brachypodium distachyon BRADI_1g58080v3 R-BDI-1125489 BRADI_1g58080v3 [Golgi membrane] R-BDI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brachypodium distachyon BRADI_1g58230v3 R-BDI-5632266 BRADI_1g58230v3 [nucleoplasm] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_1g58230v3 R-BDI-5632266 BRADI_1g58230v3 [nucleoplasm] R-BDI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5679411 Gibberellin signaling none Brachypodium distachyon BRADI_1g58480v3 R-BDI-8987473 BRADI_1g58480v3 [peroxisomal matrix] R-BDI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119312 Photorespiration none Brachypodium distachyon BRADI_1g58480v3 R-BDI-1122329 BRADI_1g58480v3 [cytosol] R-BDI-1119596 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119596 Glutamate biosynthesis I none Brachypodium distachyon BRADI_1g58511v3 R-BDI-1122287-5 BRADI_1g58511v3 [cytosol] R-BDI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119438 Secologanin and strictosidine biosynthesis none Brachypodium distachyon BRADI_1g58580v3 R-BDI-5221149 BRADI_1g58580v3 [plastid] R-BDI-1119374 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119374 Abscisic acid biosynthesis none Brachypodium distachyon BRADI_1g59053v3 R-BDI-1122287-3 BRADI_1g59053v3 [cytosol] R-BDI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119438 Secologanin and strictosidine biosynthesis none Brachypodium distachyon BRADI_1g59220v3 R-BDI-8987548 BRADI_1g59220v3 [peroxisomal matrix] R-BDI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119312 Photorespiration none Brachypodium distachyon BRADI_1g59250v3 R-BDI-8934299 BRADI_1g59250v3 [nucleoplasm] R-BDI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8934036 Long day regulated expression of florigens none Brachypodium distachyon BRADI_1g59250v3 R-BDI-8934299 BRADI_1g59250v3 [nucleoplasm] R-BDI-8934257 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8934257 Transition from vegetative to reproductive shoot apical meristem none Brachypodium distachyon BRADI_1g59250v3 R-BDI-8934299 BRADI_1g59250v3 [nucleoplasm] R-BDI-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9609102 Flower development none Brachypodium distachyon BRADI_1g59340v3 R-BDI-1122287-13 BRADI_1g59340v3 [cytosol] R-BDI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119438 Secologanin and strictosidine biosynthesis none Brachypodium distachyon BRADI_1g59503v3 R-BDI-1122287-16 BRADI_1g59503v3 [cytosol] R-BDI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119438 Secologanin and strictosidine biosynthesis none Brachypodium distachyon BRADI_1g59505v3 R-BDI-1122287 BRADI_1g59505v3 [cytosol] R-BDI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119438 Secologanin and strictosidine biosynthesis none Brachypodium distachyon BRADI_1g59570v3 R-BDI-1128069 BRADI_1g59570v3 [cytosol] R-BDI-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Brachypodium distachyon BRADI_1g59570v3 R-BDI-1128069 BRADI_1g59570v3 [cytosol] R-BDI-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Brachypodium distachyon BRADI_1g60176v3 R-BDI-9622200 BRADI_1g60176v3 [plasma membrane] R-BDI-9035605 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9035605 Regulation of seed size none Brachypodium distachyon BRADI_1g60320v3 R-BDI-1124695 BRADI_1g60320v3 [cytosol] R-BDI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119452 Galactose degradation II none Brachypodium distachyon BRADI_1g60320v3 R-BDI-1124695 BRADI_1g60320v3 [cytosol] R-BDI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119465 Sucrose biosynthesis none Brachypodium distachyon BRADI_1g60680v3 R-BDI-1125532 BRADI_1g60680v3 [cytosol] R-BDI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119276 Choline biosynthesis III none Brachypodium distachyon BRADI_1g60700v3 R-BDI-9025230 BRADI_1g60700v3 [peroxisomal matrix] R-BDI-1119407 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119407 Ureide biosynthesis none Brachypodium distachyon BRADI_1g60720v3 R-BDI-9766892 SAPK1 [nucleoplasm] R-BDI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9766881 TF network involved in salinity response none Brachypodium distachyon BRADI_1g60750v3 R-BDI-1129934 BRADI_1g60750v3 [plastid stroma] R-BDI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119430 Chorismate biosynthesis none Brachypodium distachyon BRADI_1g60860v3 R-BDI-6787004 BRADI_1g60860v3 [cytosol] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g60860v3 R-BDI-6786938 BRADI_1g60860v3 [nucleoplasm] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g61930v3 R-BDI-1128534 BRADI_1g61930v3 [cytosol] R-BDI-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119437 Glutathione redox reactions I none Brachypodium distachyon BRADI_1g62957v3 R-BDI-1126115 BRADI_1g62957v3 [cytosol] R-BDI-1119452 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119452 Galactose degradation II none Brachypodium distachyon BRADI_1g62957v3 R-BDI-1126115 BRADI_1g62957v3 [cytosol] R-BDI-1119465 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119465 Sucrose biosynthesis none Brachypodium distachyon BRADI_1g63020v3 R-BDI-1126830 BRADI_1g63020v3 [mitochondrial matrix] R-BDI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119533 TCA cycle (plant) none Brachypodium distachyon BRADI_1g63030v3 R-BDI-1126444 BRADI_1g63030v3 [cytosol] R-BDI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119610 Biotin biosynthesis II none Brachypodium distachyon BRADI_1g63220v3 R-BDI-6787213 BRADI_1g63220v3 [nucleoplasm] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g63630v3 R-BDI-9930276 BRADI_1g63630v3 [nucleoplasm] R-BDI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9766881 TF network involved in salinity response none Brachypodium distachyon BRADI_1g63680v3 R-BDI-9924413 WOX6 [nucleoplasm] R-BDI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9924451 Shoot (tiller) formation and regulation of tiller angle none Brachypodium distachyon BRADI_1g63780v3 R-BDI-6787084 BRADI_1g63780v3 [cytosol] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g63910v3 R-BDI-9826700 BRADI_1g63910v3 [nucleoplasm] R-BDI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brachypodium distachyon BRADI_1g63980v3 R-BDI-6786916 BRADI_1g63980v3 [cytosol] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g63980v3 R-BDI-6787027 BRADI_1g63980v3 [nucleoplasm] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g64060v3 R-BDI-6788172 BRADI_1g64060v3 [nucleoplasm] R-BDI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6788019 Salicylic acid signaling none Brachypodium distachyon BRADI_1g64140v3 R-BDI-9031290 BRADI_1g64140v3 [nucleoplasm] R-BDI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brachypodium distachyon BRADI_1g64360v3 R-BDI-8933856 BRADI_1g64360v3 [nucleoplasm] R-BDI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8933811 Circadian rhythm none Brachypodium distachyon BRADI_1g64360v3 R-BDI-8933748 BRADI_1g64360v3 [cytosol] R-BDI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8933811 Circadian rhythm none Brachypodium distachyon BRADI_1g64360v3 R-BDI-8933856 BRADI_1g64360v3 [nucleoplasm] R-BDI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8934036 Long day regulated expression of florigens none Brachypodium distachyon BRADI_1g64360v3 R-BDI-8933856 BRADI_1g64360v3 [nucleoplasm] R-BDI-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9924494 Gravity sensing and statolith sedimentation none Brachypodium distachyon BRADI_1g64360v3 R-BDI-8933856 BRADI_1g64360v3 [nucleoplasm] R-BDI-9928995 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9928995 Drought escape (DE) via ABA-dependent pathway none Brachypodium distachyon BRADI_1g64487v3 R-BDI-9025712-3 BRADI_1g64487v3 [cytosol] R-BDI-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9025754 Mugineic acid biosynthesis none Brachypodium distachyon BRADI_1g64500v3 R-BDI-9025712-2 BRADI_1g64500v3 [cytosol] R-BDI-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9025754 Mugineic acid biosynthesis none Brachypodium distachyon BRADI_1g64560v3 R-BDI-5655092 BRADI_1g64560v3 [Golgi lumen] R-BDI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5655101 Xyloglucan biosynthesis none Brachypodium distachyon BRADI_1g64570v3 R-BDI-5655071 BRADI_1g64570v3 [Golgi lumen] R-BDI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5655101 Xyloglucan biosynthesis none Brachypodium distachyon BRADI_1g64950v3 R-BDI-9639810 BRADI_1g64950v3 [cell wall] R-BDI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9639861 Development of root hair none Brachypodium distachyon BRADI_1g65440v3 R-BDI-9025294 BRADI_1g65440v3 [cytosol] R-BDI-1119267 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119267 Phenylalanine degradation III none Brachypodium distachyon BRADI_1g65440v3 R-BDI-1123342 BRADI_1g65440v3 [cytosol] R-BDI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119460 Isoleucine biosynthesis from threonine none Brachypodium distachyon BRADI_1g65440v3 R-BDI-1123342 BRADI_1g65440v3 [cytosol] R-BDI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119486 IAA biosynthesis I none Brachypodium distachyon BRADI_1g65440v3 R-BDI-1123342 BRADI_1g65440v3 [cytosol] R-BDI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119600 Valine biosynthesis none Brachypodium distachyon BRADI_1g65540v3 R-BDI-1128279 BRADI_1g65540v3 [cytosol] R-BDI-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119354 Asparagine biosynthesis III none Brachypodium distachyon BRADI_1g65540v3 R-BDI-1128279 BRADI_1g65540v3 [cytosol] R-BDI-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119553 Asparagine biosynthesis none Brachypodium distachyon BRADI_1g65580v3 R-BDI-1129351 BRADI_1g65580v3 [cytosol] R-BDI-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119300 Glycolipid desaturation none Brachypodium distachyon BRADI_1g65800v3 R-BDI-1126138 BRADI_1g65800v3 [cytosol] R-BDI-1119389 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119389 Phenylalanine biosynthesis I none Brachypodium distachyon BRADI_1g65810v3 R-BDI-9675423 BRADI_1g65810v3 [nucleoplasm] R-BDI-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9675508 Root elongation none Brachypodium distachyon BRADI_1g65810v3 R-BDI-9930290 MPK5 [nucleoplasm] R-BDI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9766881 TF network involved in salinity response none Brachypodium distachyon BRADI_1g65820v3 R-BDI-1127140 BRADI_1g65820v3 [cytosol] R-BDI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119403 Removal of superoxide radicals none Brachypodium distachyon BRADI_1g65910v3 R-BDI-8933708 BRADI_1g65910v3 [nucleoplasm] R-BDI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8933811 Circadian rhythm none Brachypodium distachyon BRADI_1g65950v3 R-BDI-1130032 BRADI_1g65950v3 [mitochondrial inner membrane] R-BDI-1119260 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119260 Cardiolipin biosynthesis none Brachypodium distachyon BRADI_1g66350v3 R-BDI-9658613 BRADI_1g66350v3 [plastid stroma] R-BDI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119263 Arginine biosynthesis none Brachypodium distachyon BRADI_1g66350v3 R-BDI-9658613 BRADI_1g66350v3 [plastid stroma] R-BDI-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119622 Arginine biosynthesis II (acetyl cycle) none Brachypodium distachyon BRADI_1g66440v3 R-BDI-1126799 BRADI_1g66440v3 [cytosol] R-BDI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119428 GDP-D-rhamnose biosynthesis none Brachypodium distachyon BRADI_1g66440v3 R-BDI-1126799 BRADI_1g66440v3 [cytosol] R-BDI-1119563 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119563 UDP-D-xylose biosynthesis none Brachypodium distachyon BRADI_1g66440v3 R-BDI-1126799 BRADI_1g66440v3 [cytosol] R-BDI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brachypodium distachyon BRADI_1g66920v3 R-BDI-4415078 BRADI_1g66920v3 [cytosol] R-BDI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-3899351 Abscisic acid (ABA) mediated signaling none Brachypodium distachyon BRADI_1g66930v3 R-BDI-1123261 BRADI_1g66930v3 [cytosol] R-BDI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119410 Ascorbate biosynthesis none Brachypodium distachyon BRADI_1g67020v3 R-BDI-1127082 BRADI_1g67020v3 [plastid stroma] R-BDI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119519 Calvin cycle none Brachypodium distachyon BRADI_1g67160v3 R-BDI-6787198 BRADI_1g67160v3 [cytosol] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g67240v3 R-BDI-1123998 BRADI_1g67240v3 [chloroplast] R-BDI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119494 Tryptophan biosynthesis none Brachypodium distachyon BRADI_1g67260v3 R-BDI-9025430 BRADI_1g67260v3 [endoplasmic reticulum membrane] R-BDI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119325 Sphingolipid metabolism none Brachypodium distachyon BRADI_1g67310v3 R-BDI-1125989 BRADI_1g67310v3 [cytosol] R-BDI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119438 Secologanin and strictosidine biosynthesis none Brachypodium distachyon BRADI_1g67360v3 R-BDI-9626449 BRADI_1g67360v3 [cytosol] R-BDI-9626305 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9626305 Regulatory network of nutrient accumulation none Brachypodium distachyon BRADI_1g67393v3 R-BDI-1122287-11 BRADI_1g67393v3 [cytosol] R-BDI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119438 Secologanin and strictosidine biosynthesis none Brachypodium distachyon BRADI_1g67790v3 R-BDI-1130456 BRADI_1g67790v3 [plastid stroma] R-BDI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119430 Chorismate biosynthesis none Brachypodium distachyon BRADI_1g67800v3 R-BDI-5632157 BRADI_1g67800v3 [nucleoplasm] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_1g67800v3 R-BDI-5632157 BRADI_1g67800v3 [nucleoplasm] R-BDI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5654828 Strigolactone signaling none Brachypodium distachyon BRADI_1g67920v3 R-BDI-9025453 BRADI_1g67920v3 [endoplasmic reticulum membrane] R-BDI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119325 Sphingolipid metabolism none Brachypodium distachyon BRADI_1g68040v3 R-BDI-1126421 BRADI_1g68040v3 [cytosol] R-BDI-1119428 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119428 GDP-D-rhamnose biosynthesis none Brachypodium distachyon BRADI_1g68040v3 R-BDI-1126421 BRADI_1g68040v3 [cytosol] R-BDI-1119620 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119620 GDP-L-fucose biosynthesis I (from GDP-D-mannose) none Brachypodium distachyon BRADI_1g68380v3 R-BDI-1125870 BRADI_1g68380v3 [cytosol] R-BDI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119273 Lysine biosynthesis I none Brachypodium distachyon BRADI_1g68380v3 R-BDI-1125870 BRADI_1g68380v3 [cytosol] R-BDI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119283 Lysine biosynthesis II none Brachypodium distachyon BRADI_1g68380v3 R-BDI-5606480 BRADI_1g68380v3 [plastid stroma] R-BDI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119419 Lysine biosynthesis VI none Brachypodium distachyon BRADI_1g68620v3 R-BDI-9675860-2 BRADI_1g68620v3 [nucleoplasm] R-BDI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9675824 DNA replication Initiation none Brachypodium distachyon BRADI_1g68740v3 R-BDI-9025809 BRADI_1g68740v3 [cytosol] R-BDI-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9025754 Mugineic acid biosynthesis none Brachypodium distachyon BRADI_1g68807v3 R-BDI-1125051 BRADI_1g68807v3 [cytosol] R-BDI-1119458 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119458 Glutamate degradation none Brachypodium distachyon BRADI_1g69160v3 R-BDI-1122974 BRADI_1g69160v3 [mitochondrial matrix] R-BDI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119479 Valine degradation none Brachypodium distachyon BRADI_1g69420v3 R-BDI-1128804 BRADI_1g69420v3 [cytosol] R-BDI-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119516 Trehalose biosynthesis I none Brachypodium distachyon BRADI_1g69530v3 R-BDI-1127192 BRADI_1g69530v3 [cytosol] R-BDI-1119291 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119291 Nitrate assimilation none Brachypodium distachyon BRADI_1g69530v3 R-BDI-1127192 BRADI_1g69530v3 [cytosol] R-BDI-1119293 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119293 Glutamine biosynthesis I none Brachypodium distachyon BRADI_1g69530v3 R-BDI-1127192 BRADI_1g69530v3 [cytosol] R-BDI-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119443 Ammonia assimilation cycle none Brachypodium distachyon BRADI_1g69627v3 R-BDI-1129111 BRADI_1g69627v3 [cytosol] R-BDI-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119349 S-methylmethionine cycle none Brachypodium distachyon BRADI_1g69627v3 R-BDI-1129111 BRADI_1g69627v3 [cytosol] R-BDI-1119400 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119400 Methionine biosynthesis II none Brachypodium distachyon BRADI_1g69980v3 R-BDI-9645944 BRADI_1g69980v3 [nucleoplasm] R-BDI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9645850 Activation of pre-replication complex none Brachypodium distachyon BRADI_1g70930v3 R-BDI-5654859 BRADI_1g70930v3 [nucleoplasm] R-BDI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5654828 Strigolactone signaling none Brachypodium distachyon BRADI_1g70930v3 R-BDI-5654859 BRADI_1g70930v3 [nucleoplasm] R-BDI-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Brachypodium distachyon BRADI_1g71280v3 R-BDI-9826620 HOX12/ OsGT1 [nucleoplasm] R-BDI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brachypodium distachyon BRADI_1g71280v3 R-BDI-9826620 HOX12/ OsGT1 [nucleoplasm] R-BDI-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Brachypodium distachyon BRADI_1g71430v3 R-BDI-1127723 BRADI_1g71430v3 [cytosol] R-BDI-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119331 Cysteine biosynthesis I none Brachypodium distachyon BRADI_1g71530v3 R-BDI-5606521 BRADI_1g71530v3 [plastid stroma] R-BDI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119419 Lysine biosynthesis VI none Brachypodium distachyon BRADI_1g71667v3 R-BDI-1129964 BRADI_1g71667v3 [cytosol] R-BDI-1119378 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119378 Myo-inositol biosynthesis none Brachypodium distachyon BRADI_1g71667v3 R-BDI-1129964 BRADI_1g71667v3 [cytosol] R-BDI-1119434 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119434 Phytic acid biosynthesis (lipid-independent) none Brachypodium distachyon BRADI_1g71860v3 R-BDI-1122295 BRADI_1g71860v3 [cytosol] R-BDI-1119353 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119353 Linear furanocoumarin biosynthesis none Brachypodium distachyon BRADI_1g71990v3 R-BDI-9826680 BRADI_1g71990v3 [nucleoplasm] R-BDI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brachypodium distachyon BRADI_1g72070v3 R-BDI-5608140 BRADI_1g72070v3 [nucleoplasm] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_1g72180v3 R-BDI-4827040 BRADI_1g72180v3 [plastid stroma] R-BDI-4827054 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-4827054 Tetrapyrrole biosynthesis I none Brachypodium distachyon BRADI_1g72310v3 R-BDI-9640701 BRADI_1g72310v3 [nucleoplasm] R-BDI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9640882 Assembly of pre-replication complex none Brachypodium distachyon BRADI_1g72310v3 R-BDI-9640701 BRADI_1g72310v3 [nucleoplasm] R-BDI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9645850 Activation of pre-replication complex none Brachypodium distachyon BRADI_1g72350v3 R-BDI-5654911 BRADI_1g72350v3 [Golgi lumen] R-BDI-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5654909 Xylan biosynthesis none Brachypodium distachyon BRADI_1g72600v3 R-BDI-6787180 BRADI_1g72600v3 [nucleoplasm] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g72600v3 R-BDI-6787152 BRADI_1g72600v3 [cytosol] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g72610v3 R-BDI-6786958 BRADI_1g72610v3 [nucleoplasm] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g72610v3 R-BDI-6787234 BRADI_1g72610v3 [cytosol] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g72690v3 R-BDI-1123433 BRADI_1g72690v3 [cytosol] R-BDI-1119332 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119332 Jasmonic acid biosynthesis none Brachypodium distachyon BRADI_1g72690v3 R-BDI-1123433 BRADI_1g72690v3 [cytosol] R-BDI-1119618 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119618 13-LOX and 13-HPL pathway none Brachypodium distachyon BRADI_1g73770v3 R-BDI-1122934 BRADI_1g73770v3 [plastid stroma] R-BDI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119519 Calvin cycle none Brachypodium distachyon BRADI_1g73870v3 R-BDI-5632205 BRADI_1g73870v3 [nucleoplasm] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_1g73877v3 R-BDI-8986767 BRADI_1g73877v3 [plastid] R-BDI-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8986768 Anther and pollen development none Brachypodium distachyon BRADI_1g74180v3 R-BDI-1127299 BRADI_1g74180v3 [cytosol] R-BDI-1119298 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119298 Glutathione redox reactions II none Brachypodium distachyon BRADI_1g74180v3 R-BDI-1127299 BRADI_1g74180v3 [cytosol] R-BDI-1119437 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119437 Glutathione redox reactions I none Brachypodium distachyon BRADI_1g74350v3 R-BDI-9924379 HSFA2D [nucleoplasm] R-BDI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9924451 Shoot (tiller) formation and regulation of tiller angle none Brachypodium distachyon BRADI_1g74710v3 R-BDI-9916247 OsEXPA19 [extracellular region] R-BDI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9916190 Root angle formation: elongation and curvature response none Brachypodium distachyon BRADI_1g74710v3 R-BDI-9916296 OsEXPA20 [extracellular region] R-BDI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9916190 Root angle formation: elongation and curvature response none Brachypodium distachyon BRADI_1g74950v3 R-BDI-1124065 BRADI_1g74950v3 [cytosol] R-BDI-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Brachypodium distachyon BRADI_1g75450v3 R-BDI-5655057 BRADI_1g75450v3 [Golgi lumen] R-BDI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5655101 Xyloglucan biosynthesis none Brachypodium distachyon BRADI_1g75877v3 R-BDI-9640687 BRADI_1g75877v3 [nucleoplasm] R-BDI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9640760 G1 phase none Brachypodium distachyon BRADI_1g75887v3 R-BDI-9640687-2 BRADI_1g75887v3 [nucleoplasm] R-BDI-9640760 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9640760 G1 phase none Brachypodium distachyon BRADI_1g75960v3 R-BDI-1130136 BRADI_1g75960v3 [mitochondrial matrix] R-BDI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119533 TCA cycle (plant) none Brachypodium distachyon BRADI_1g75960v3 R-BDI-1130136 BRADI_1g75960v3 [mitochondrial matrix] R-BDI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119540 Leucine biosynthesis none Brachypodium distachyon BRADI_1g76020v3 R-BDI-1127899 BRADI_1g76020v3 [cytosol] R-BDI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119370 Sterol biosynthesis none Brachypodium distachyon BRADI_1g76130v3 R-BDI-1128263 BRADI_1g76130v3 [plastid stroma] R-BDI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119509 Histidine biosynthesis I none Brachypodium distachyon BRADI_1g76140v3 R-BDI-1128641 BRADI_1g76140v3 [cytosol] R-BDI-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119331 Cysteine biosynthesis I none Brachypodium distachyon BRADI_1g76177v3 R-BDI-9611526 CEBiP [plasma membrane] R-BDI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brachypodium distachyon BRADI_1g76227v3 R-BDI-5632232 phospho-BRADI_1g76227v3 [plasma membrane] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_1g76420v3 R-BDI-6787009 BRADI_1g76420v3 [nucleoplasm] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_1g76470v3 R-BDI-1126728 BRADI_1g76470v3 [plastid stroma] R-BDI-1119424 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119424 Plastid glycolysis none Brachypodium distachyon BRADI_1g76590v3 R-BDI-9675876 BRADI_1g76590v3 [nucleoplasm] R-BDI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9675782 Maturation none Brachypodium distachyon BRADI_1g76590v3 R-BDI-9675876 BRADI_1g76590v3 [nucleoplasm] R-BDI-9675815 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9675815 Leading strand synthesis none Brachypodium distachyon BRADI_1g76590v3 R-BDI-9675876 BRADI_1g76590v3 [nucleoplasm] R-BDI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9675885 Lagging strand synthesis none Brachypodium distachyon BRADI_1g76800v3 R-BDI-1126238 BRADI_1g76800v3 [chloroplast] R-BDI-1119494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119494 Tryptophan biosynthesis none Brachypodium distachyon BRADI_1g77020v3 R-BDI-8934063 BRADI_1g77020v3 [nucleoplasm] R-BDI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8934036 Long day regulated expression of florigens none Brachypodium distachyon BRADI_1g77020v3 R-BDI-8934063 BRADI_1g77020v3 [nucleoplasm] R-BDI-8934108 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8934108 Short day regulated expression of florigens none Brachypodium distachyon BRADI_1g77020v3 R-BDI-8934063 BRADI_1g77020v3 [nucleoplasm] R-BDI-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9928946 Drought escape (DE) via ABA-independent pathway none Brachypodium distachyon BRADI_1g77265v3 R-BDI-1125610 BRADI_1g77265v3 [cytosol] R-BDI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119276 Choline biosynthesis III none Brachypodium distachyon BRADI_1g77290v3 R-BDI-1128328 BRADI_1g77290v3 [cytosol] R-BDI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119615 Mevalonate pathway none Brachypodium distachyon BRADI_1g77370v3 R-BDI-1125834 BRADI_1g77370v3 [cytosol] R-BDI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119379 Flavin biosynthesis none Brachypodium distachyon BRADI_1g77400v3 R-BDI-1129478 BRADI_1g77400v3 [cytosol] R-BDI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119273 Lysine biosynthesis I none Brachypodium distachyon BRADI_1g77400v3 R-BDI-1129478 BRADI_1g77400v3 [cytosol] R-BDI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119283 Lysine biosynthesis II none Brachypodium distachyon BRADI_1g77400v3 R-BDI-5606483 BRADI_1g77400v3 [plastid stroma] R-BDI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119419 Lysine biosynthesis VI none Brachypodium distachyon BRADI_1g77505v3 R-BDI-1126671 BRADI_1g77505v3 [cytosol] R-BDI-1119534 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119534 Pyridoxal 5'-phosphate salvage pathway none Brachypodium distachyon BRADI_1g77505v3 R-BDI-1126671 BRADI_1g77505v3 [cytosol] R-BDI-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119594 Pyridoxal 5'-phosphate biosynthesis none Brachypodium distachyon BRADI_1g77597v3 R-BDI-1127346-2 BRADI_1g77597v3 [cytosol] R-BDI-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119316 Phenylpropanoid biosynthesis none Brachypodium distachyon BRADI_1g77740v3 R-BDI-1127346 BRADI_1g77740v3 [cytosol] R-BDI-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119316 Phenylpropanoid biosynthesis none Brachypodium distachyon BRADI_1g77850v3 R-BDI-1125194 BRADI_1g77850v3 [cytosol] R-BDI-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119484 Folate polyglutamylation II none Brachypodium distachyon BRADI_1g77850v3 R-BDI-1125194 BRADI_1g77850v3 [cytosol] R-BDI-1119523 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119523 Tetrahydrofolate biosynthesis II none Brachypodium distachyon BRADI_1g77850v3 R-BDI-1125194 BRADI_1g77850v3 [cytosol] R-BDI-1119617 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119617 Folate polyglutamylation I none Brachypodium distachyon BRADI_1g78100v3 R-BDI-9618139 BRADI_1g78100v3 [plasma membrane] R-BDI-9618218 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9618218 Arsenic uptake and detoxification none Brachypodium distachyon BRADI_1g78130v3 R-BDI-1126113 BRADI_1g78130v3 [cytosol] R-BDI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119460 Isoleucine biosynthesis from threonine none Brachypodium distachyon BRADI_1g78130v3 R-BDI-1126113 BRADI_1g78130v3 [cytosol] R-BDI-1119496 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119496 Pantothenate biosynthesis I none Brachypodium distachyon BRADI_1g78130v3 R-BDI-1126113 BRADI_1g78130v3 [cytosol] R-BDI-1119540 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119540 Leucine biosynthesis none Brachypodium distachyon BRADI_1g78130v3 R-BDI-1126113 BRADI_1g78130v3 [cytosol] R-BDI-1119544 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119544 Pantothenate biosynthesis II none Brachypodium distachyon BRADI_1g78460v3 R-BDI-1127338 BRADI_1g78460v3 [mitochondrial inner membrane] R-BDI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119402 Phospholipid biosynthesis I none Brachypodium distachyon BRADI_2g00650v3 R-BDI-1126916 BRADI_2g00650v3 [plastid stroma] R-BDI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119464 Methylerythritol phosphate pathway none Brachypodium distachyon BRADI_2g00690v3 R-BDI-1125340 BRADI_2g00690v3 [plastid stroma] R-BDI-1119274 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119274 Monoterpene biosynthesis none Brachypodium distachyon BRADI_2g00690v3 R-BDI-1125340 BRADI_2g00690v3 [plastid stroma] R-BDI-1119593 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119593 Oleoresin monoterpene volatiles biosynthesis none Brachypodium distachyon BRADI_2g00890v3 R-BDI-1124270 BRADI_2g00890v3 [cytosol] R-BDI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119615 Mevalonate pathway none Brachypodium distachyon BRADI_2g01350v3 R-BDI-5149676 BRADI_2g01350v3 [plastid stroma] R-BDI-1119519 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119519 Calvin cycle none Brachypodium distachyon BRADI_2g01370v3 R-BDI-9025363 BRADI_2g01370v3 [endoplasmic reticulum membrane] R-BDI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119402 Phospholipid biosynthesis I none Brachypodium distachyon BRADI_2g01800v3 R-BDI-9916160 BRADI_2g01800v3 [nucleoplasm] R-BDI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9916190 Root angle formation: elongation and curvature response none Brachypodium distachyon BRADI_2g01950v3 R-BDI-1126531 BRADI_2g01950v3 [cytosol] R-BDI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119410 Ascorbate biosynthesis none Brachypodium distachyon BRADI_2g01950v3 R-BDI-1126531 BRADI_2g01950v3 [cytosol] R-BDI-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119628 GDP-mannose metabolism none Brachypodium distachyon BRADI_2g02360v3 R-BDI-1127318-3 BRADI_2g02360v3 [cytosol] R-BDI-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Brachypodium distachyon BRADI_2g02360v3 R-BDI-1127318-3 BRADI_2g02360v3 [cytosol] R-BDI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119438 Secologanin and strictosidine biosynthesis none Brachypodium distachyon BRADI_2g02360v3 R-BDI-1127318-3 BRADI_2g02360v3 [cytosol] R-BDI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119486 IAA biosynthesis I none Brachypodium distachyon BRADI_2g02370v3 R-BDI-1123150-3 BRADI_2g02370v3 [cytosol] R-BDI-1119344 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119344 Hydroxycinnamic acid serotonin amides biosynthesis none Brachypodium distachyon BRADI_2g02370v3 R-BDI-1123150-3 BRADI_2g02370v3 [cytosol] R-BDI-1119438 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119438 Secologanin and strictosidine biosynthesis none Brachypodium distachyon BRADI_2g02370v3 R-BDI-1123150-3 BRADI_2g02370v3 [cytosol] R-BDI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119486 IAA biosynthesis I none Brachypodium distachyon BRADI_2g02380v3 R-BDI-9609608-2 BRADI_2g02380v3 [cytosol] R-BDI-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9609573 Tricin biosynthesis none Brachypodium distachyon BRADI_2g02380v3 R-BDI-9916171-2 OsOMT [cytosol] R-BDI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9916190 Root angle formation: elongation and curvature response none Brachypodium distachyon BRADI_2g02380v3 R-BDI-9916312-2 OsOMT [nucleoplasm] R-BDI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9916190 Root angle formation: elongation and curvature response none Brachypodium distachyon BRADI_2g02390v3 R-BDI-9609608-4 BRADI_2g02390v3 [cytosol] R-BDI-9609573 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9609573 Tricin biosynthesis none Brachypodium distachyon BRADI_2g02390v3 R-BDI-9916171-4 OsOMT [cytosol] R-BDI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9916190 Root angle formation: elongation and curvature response none Brachypodium distachyon BRADI_2g02390v3 R-BDI-9916312-4 OsOMT [nucleoplasm] R-BDI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9916190 Root angle formation: elongation and curvature response none Brachypodium distachyon BRADI_2g02720v3 R-BDI-9826681 EREBP129 [nucleoplasm] R-BDI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brachypodium distachyon BRADI_2g03297v3 R-BDI-1125877 BRADI_2g03297v3 [cytosol] R-BDI-1119456 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119456 Brassinosteroid biosynthesis II none Brachypodium distachyon BRADI_2g03380v3 R-BDI-1124613 BRADI_2g03380v3 [plasma membrane] R-BDI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119314 Cellulose biosynthesis none Brachypodium distachyon BRADI_2g03530v3 R-BDI-1123211 BRADI_2g03530v3 [cytosol] R-BDI-1119286 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119286 Cholesterol biosynthesis II (via 24,25-dihydrolanosterol) none Brachypodium distachyon BRADI_2g03530v3 R-BDI-1123211 BRADI_2g03530v3 [cytosol] R-BDI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119370 Sterol biosynthesis none Brachypodium distachyon BRADI_2g03530v3 R-BDI-1123211 BRADI_2g03530v3 [cytosol] R-BDI-1119439 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119439 Cholesterol biosynthesis III (via desmosterol) none Brachypodium distachyon BRADI_2g03530v3 R-BDI-1123211 BRADI_2g03530v3 [cytosol] R-BDI-1119559 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119559 Cholesterol biosynthesis I none Brachypodium distachyon BRADI_2g03680v3 R-BDI-1125182 BRADI_2g03680v3 [plastid stroma] R-BDI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119430 Chorismate biosynthesis none Brachypodium distachyon BRADI_2g03740v3 R-BDI-1130231 BRADI_2g03740v3 [endoplasmic reticulum membrane] R-BDI-1119325 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119325 Sphingolipid metabolism none Brachypodium distachyon BRADI_2g03800v3 R-BDI-1122545 BRADI_2g03800v3 [cytosol] R-BDI-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119331 Cysteine biosynthesis I none Brachypodium distachyon BRADI_2g03840v3 R-BDI-1124944 BRADI_2g03840v3 [plastid stroma] R-BDI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119460 Isoleucine biosynthesis from threonine none Brachypodium distachyon BRADI_2g03840v3 R-BDI-1124944 BRADI_2g03840v3 [plastid stroma] R-BDI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119486 IAA biosynthesis I none Brachypodium distachyon BRADI_2g03840v3 R-BDI-1124944 BRADI_2g03840v3 [plastid stroma] R-BDI-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119502 Allantoin degradation none Brachypodium distachyon BRADI_2g03840v3 R-BDI-1124944 BRADI_2g03840v3 [plastid stroma] R-BDI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119600 Valine biosynthesis none Brachypodium distachyon BRADI_2g03990v3 R-BDI-6788042 BRADI_2g03990v3 [nucleoplasm] R-BDI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6788019 Salicylic acid signaling none Brachypodium distachyon BRADI_2g04000v3 R-BDI-9930201 DREB2A [nucleoplasm] R-BDI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9766881 TF network involved in salinity response none Brachypodium distachyon BRADI_2g04290v3 R-BDI-1125521 BRADI_2g04290v3 [cytosol] R-BDI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119486 IAA biosynthesis I none Brachypodium distachyon BRADI_2g04480v3 R-BDI-1122471 BRADI_2g04480v3 [cytosol] R-BDI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119276 Choline biosynthesis III none Brachypodium distachyon BRADI_2g04720v3 R-BDI-1128678 BRADI_2g04720v3 [cytosol] R-BDI-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119292 Cytokinins 7-N-glucoside biosynthesis none Brachypodium distachyon BRADI_2g04720v3 R-BDI-1128678 BRADI_2g04720v3 [cytosol] R-BDI-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119375 Cytokinins 9-N-glucoside biosynthesis none Brachypodium distachyon BRADI_2g04720v3 R-BDI-1128678 BRADI_2g04720v3 [cytosol] R-BDI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119473 Cytokinins-O-glucoside biosynthesis none Brachypodium distachyon BRADI_2g04747v3 R-BDI-1128678-2 BRADI_2g04747v3 [cytosol] R-BDI-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119292 Cytokinins 7-N-glucoside biosynthesis none Brachypodium distachyon BRADI_2g04747v3 R-BDI-1128678-2 BRADI_2g04747v3 [cytosol] R-BDI-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119375 Cytokinins 9-N-glucoside biosynthesis none Brachypodium distachyon BRADI_2g04747v3 R-BDI-1128678-2 BRADI_2g04747v3 [cytosol] R-BDI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119473 Cytokinins-O-glucoside biosynthesis none Brachypodium distachyon BRADI_2g04760v3 R-BDI-1128678-3 BRADI_2g04760v3 [cytosol] R-BDI-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119292 Cytokinins 7-N-glucoside biosynthesis none Brachypodium distachyon BRADI_2g04760v3 R-BDI-1128678-3 BRADI_2g04760v3 [cytosol] R-BDI-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119375 Cytokinins 9-N-glucoside biosynthesis none Brachypodium distachyon BRADI_2g04760v3 R-BDI-1128678-3 BRADI_2g04760v3 [cytosol] R-BDI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119473 Cytokinins-O-glucoside biosynthesis none Brachypodium distachyon BRADI_2g04895v3 R-BDI-9639205 BRADI_2g04895v3 [plasma membrane] R-BDI-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9639136 Response to Aluminum stress none Brachypodium distachyon BRADI_2g05226v3 R-BDI-8933813 BRADI_2g05226v3 [nucleoplasm] R-BDI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8933811 Circadian rhythm none Brachypodium distachyon BRADI_2g05226v3 R-BDI-8933813 BRADI_2g05226v3 [nucleoplasm] R-BDI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8934036 Long day regulated expression of florigens none Brachypodium distachyon BRADI_2g05226v3 R-BDI-8933813 BRADI_2g05226v3 [nucleoplasm] R-BDI-9924451 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9924451 Shoot (tiller) formation and regulation of tiller angle none Brachypodium distachyon BRADI_2g05226v3 R-BDI-8933813 BRADI_2g05226v3 [nucleoplasm] R-BDI-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9928946 Drought escape (DE) via ABA-independent pathway none Brachypodium distachyon BRADI_2g05250v3 R-BDI-8854120 BRADI_2g05250v3 [cytosol] R-BDI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119556 Choline biosynthesis I none Brachypodium distachyon BRADI_2g05600v3 R-BDI-1122541 BRADI_2g05600v3 [cytosol] R-BDI-1119294 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119294 Gibberellin biosynthesis III (early C-13 hydroxylation) none Brachypodium distachyon BRADI_2g05600v3 R-BDI-1122541 BRADI_2g05600v3 [cytosol] R-BDI-1119625 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119625 Gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) none Brachypodium distachyon BRADI_2g05650v3 R-BDI-1125058 BRADI_2g05650v3 [nucleoplasm] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_2g05750v3 R-BDI-9916314 OsDOS [nucleoplasm] R-BDI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9916190 Root angle formation: elongation and curvature response none Brachypodium distachyon BRADI_2g05790v3 R-BDI-1125060 BRADI_2g05790v3 [cytosol] R-BDI-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119334 Ethylene biosynthesis from methionine none Brachypodium distachyon BRADI_2g05790v3 R-BDI-1125060 BRADI_2g05790v3 [cytosol] R-BDI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119624 Methionine salvage pathway none Brachypodium distachyon BRADI_2g05850v3 R-BDI-5679443-3 BRADI_2g05850v3 [nucleoplasm] R-BDI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5679411 Gibberellin signaling none Brachypodium distachyon BRADI_2g05850v3 R-BDI-5679443-3 BRADI_2g05850v3 [nucleoplasm] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_2g05850v3 R-BDI-6787090-3 BRADI_2g05850v3 [cytosol] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_2g05870v3 R-BDI-6788127 BRADI_2g05870v3 [nucleoplasm] R-BDI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6788019 Salicylic acid signaling none Brachypodium distachyon BRADI_2g05870v3 R-BDI-6788179 BRADI_2g05870v3 [cytosol] R-BDI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6788019 Salicylic acid signaling none Brachypodium distachyon BRADI_2g05900v3 R-BDI-5679376 BRADI_2g05900v3 [nucleoplasm] R-BDI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5679411 Gibberellin signaling none Brachypodium distachyon BRADI_2g06160v3 R-BDI-1125698 BRADI_2g06160v3 [cytosol] R-BDI-1119436 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119436 Peptidoglycan biosynthesis I none Brachypodium distachyon BRADI_2g06400v3 R-BDI-5632315 BRADI_2g06400v3 [nucleoplasm] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_2g06400v3 R-BDI-5632284 phospho-BRADI_2g06400v3 [nucleoplasm] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_2g06400v3 R-BDI-5632277 phospho-BRADI_2g06400v3 [cytosol] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_2g06400v3 R-BDI-5632315 BRADI_2g06400v3 [nucleoplasm] R-BDI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5679411 Gibberellin signaling none Brachypodium distachyon BRADI_2g06490v3 R-BDI-5632139 BRADI_2g06490v3 [nucleoplasm] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_2g07227v3 R-BDI-6787202 BRADI_2g07227v3 [cytosol] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_2g07577v3 R-BDI-1126395 BRADI_2g07577v3 [cytosol] R-BDI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119486 IAA biosynthesis I none Brachypodium distachyon BRADI_2g07590v3 R-BDI-1124096 BRADI_2g07590v3 [cytosol] R-BDI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119486 IAA biosynthesis I none Brachypodium distachyon BRADI_2g07597v3 R-BDI-1124096-2 BRADI_2g07597v3 [cytosol] R-BDI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119486 IAA biosynthesis I none Brachypodium distachyon BRADI_2g07770v3 R-BDI-1126435 BRADI_2g07770v3 [nucleoplasm] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_2g08080v3 R-BDI-6787066 BRADI_2g08080v3 [nucleoplasm] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_2g08120v3 R-BDI-9675365 BRADI_2g08120v3 [nucleoplasm] R-BDI-9675508 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9675508 Root elongation none Brachypodium distachyon BRADI_2g08460v3 R-BDI-5679436 BRADI_2g08460v3 [nucleoplasm] R-BDI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5679411 Gibberellin signaling none Brachypodium distachyon BRADI_2g08620v3 R-BDI-6787229 BRADI_2g08620v3 [nucleoplasm] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_2g08620v3 R-BDI-9826659 BRADI_2g08620v3 [nucleoplasm] R-BDI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brachypodium distachyon BRADI_2g08920v3 R-BDI-9675273 BRADI_2g08920v3 [nucleoplasm] R-BDI-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9030557 Lateral root initiation none Brachypodium distachyon BRADI_2g09030v3 R-BDI-9646016 BRADI_2g09030v3 [nucleoplasm] R-BDI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9645850 Activation of pre-replication complex none Brachypodium distachyon BRADI_2g09030v3 R-BDI-9646016 BRADI_2g09030v3 [nucleoplasm] R-BDI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9675782 Maturation none Brachypodium distachyon BRADI_2g09030v3 R-BDI-9646016 BRADI_2g09030v3 [nucleoplasm] R-BDI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9675885 Lagging strand synthesis none Brachypodium distachyon BRADI_2g09080v3 R-BDI-5632301 BRADI_2g09080v3 [nucleoplasm] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_2g09080v3 R-BDI-5632301 BRADI_2g09080v3 [nucleoplasm] R-BDI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5654828 Strigolactone signaling none Brachypodium distachyon BRADI_2g09080v3 R-BDI-5632301 BRADI_2g09080v3 [nucleoplasm] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_2g09540v3 R-BDI-4788601 BRADI_2g09540v3 [plastid stroma] R-BDI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119509 Histidine biosynthesis I none Brachypodium distachyon BRADI_2g10490v3 R-BDI-1123596 BRADI_2g10490v3 [plastid stroma] R-BDI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119509 Histidine biosynthesis I none Brachypodium distachyon BRADI_2g11080v3 R-BDI-9826674 BRADI_2g11080v3 [nucleoplasm] R-BDI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brachypodium distachyon BRADI_2g11100v3 R-BDI-8933777 BRADI_2g11100v3 [nucleoplasm] R-BDI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8933811 Circadian rhythm none Brachypodium distachyon BRADI_2g11100v3 R-BDI-9924457 PIL15 [nucleoplasm] R-BDI-9924494 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9924494 Gravity sensing and statolith sedimentation none Brachypodium distachyon BRADI_2g11120v3 R-BDI-1129914 BRADI_2g11120v3 [nucleoplasm] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_2g11200v3 R-BDI-9612380 BRADI_2g11200v3 [cytosol] R-BDI-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119612 Cysteine degradation none Brachypodium distachyon BRADI_2g11250v3 R-BDI-1125615 BRADI_2g11250v3 [cytosol] R-BDI-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119334 Ethylene biosynthesis from methionine none Brachypodium distachyon BRADI_2g11250v3 R-BDI-1125615 BRADI_2g11250v3 [cytosol] R-BDI-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119501 S-adenosyl-L-methionine cycle none Brachypodium distachyon BRADI_2g11250v3 R-BDI-1125615 BRADI_2g11250v3 [cytosol] R-BDI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119624 Methionine salvage pathway none Brachypodium distachyon BRADI_2g11250v3 R-BDI-9025738 BRADI_2g11250v3 [cytosol] R-BDI-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9025754 Mugineic acid biosynthesis none Brachypodium distachyon BRADI_2g11260v3 R-BDI-8986623 BRADI_2g11260v3 [nucleoplasm] R-BDI-8986768 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8986768 Anther and pollen development none Brachypodium distachyon BRADI_2g11790v3 R-BDI-6786999 BRADI_2g11790v3 [nucleoplasm] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_2g12150v3 R-BDI-1124164-2 BRADI_2g12150v3 [cytosol] R-BDI-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119334 Ethylene biosynthesis from methionine none Brachypodium distachyon BRADI_2g12150v3 R-BDI-1124164-2 BRADI_2g12150v3 [cytosol] R-BDI-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119501 S-adenosyl-L-methionine cycle none Brachypodium distachyon BRADI_2g12150v3 R-BDI-1124164-2 BRADI_2g12150v3 [cytosol] R-BDI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119624 Methionine salvage pathway none Brachypodium distachyon BRADI_2g12150v3 R-BDI-9025764-2 BRADI_2g12150v3 [cytosol] R-BDI-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9025754 Mugineic acid biosynthesis none Brachypodium distachyon BRADI_2g12160v3 R-BDI-1124164 BRADI_2g12160v3 [cytosol] R-BDI-1119334 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119334 Ethylene biosynthesis from methionine none Brachypodium distachyon BRADI_2g12160v3 R-BDI-1124164 BRADI_2g12160v3 [cytosol] R-BDI-1119501 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119501 S-adenosyl-L-methionine cycle none Brachypodium distachyon BRADI_2g12160v3 R-BDI-1124164 BRADI_2g12160v3 [cytosol] R-BDI-1119624 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119624 Methionine salvage pathway none Brachypodium distachyon BRADI_2g12160v3 R-BDI-9025764 BRADI_2g12160v3 [cytosol] R-BDI-9025754 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9025754 Mugineic acid biosynthesis none Brachypodium distachyon BRADI_2g12170v3 R-BDI-9916108 BRADI_2g12170v3 [extracellular region] R-BDI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119403 Removal of superoxide radicals none Brachypodium distachyon BRADI_2g12170v3 R-BDI-9916108 BRADI_2g12170v3 [extracellular region] R-BDI-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9607185 Generation of superoxide radicals none Brachypodium distachyon BRADI_2g12310v3 R-BDI-8986605 BRADI_2g12310v3 [mitochondrial matrix] R-BDI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119312 Photorespiration none Brachypodium distachyon BRADI_2g12310v3 R-BDI-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-BDI-1119351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119351 Mitochondrial pyruvate metabolism none Brachypodium distachyon BRADI_2g12310v3 R-BDI-1124620 LPDE3-1 (LOC_OS01G22520.1) [mitochondrial matrix] R-BDI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119533 TCA cycle (plant) none Brachypodium distachyon BRADI_2g12790v3 R-BDI-9607132 RBOHB [plasma membrane] R-BDI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brachypodium distachyon BRADI_2g12790v3 R-BDI-9611529 phospho-phosphorylated-RBOHB [plasma membrane] R-BDI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brachypodium distachyon BRADI_2g13087v3 R-BDI-8987535 BRADI_2g13087v3 [chloroplast] R-BDI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119312 Photorespiration none Brachypodium distachyon BRADI_2g13170v3 R-BDI-1127695 BRADI_2g13170v3 [plastid stroma] R-BDI-1119430 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119430 Chorismate biosynthesis none Brachypodium distachyon BRADI_2g13360v3 R-BDI-1127597 BRADI_2g13360v3 [cytosol] R-BDI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119615 Mevalonate pathway none Brachypodium distachyon BRADI_2g14275v3 R-BDI-1123746 BRADI_2g14275v3 [cytosol] R-BDI-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119586 Cyanate degradation none Brachypodium distachyon BRADI_2g14290v3 R-BDI-8933860 BRADI_2g14290v3 [nucleoplasm] R-BDI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8933811 Circadian rhythm none Brachypodium distachyon BRADI_2g14290v3 R-BDI-8933860 BRADI_2g14290v3 [nucleoplasm] R-BDI-9928946 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9928946 Drought escape (DE) via ABA-independent pathway none Brachypodium distachyon BRADI_2g14420v3 R-BDI-3899348 BRADI_2g14420v3 [cytosol] R-BDI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-3899351 Abscisic acid (ABA) mediated signaling none Brachypodium distachyon BRADI_2g14420v3 R-BDI-3899348 BRADI_2g14420v3 [cytosol] R-BDI-9639861 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9639861 Development of root hair none Brachypodium distachyon BRADI_2g14830v3 R-BDI-6787184 BRADI_2g14830v3 [cytosol] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_2g14970v3 R-BDI-1127562 BRADI_2g14970v3 [amyloplast] R-BDI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119477 Starch biosynthesis none Brachypodium distachyon BRADI_2g15307v3 R-BDI-1123482 BRADI_2g15307v3 [plastid stroma] R-BDI-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119367 Polyisoprenoid biosynthesis none Brachypodium distachyon BRADI_2g15480v3 R-BDI-1126602 BRADI_2g15480v3 [cytosol] R-BDI-1119273 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119273 Lysine biosynthesis I none Brachypodium distachyon BRADI_2g15480v3 R-BDI-1126602 BRADI_2g15480v3 [cytosol] R-BDI-1119283 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119283 Lysine biosynthesis II none Brachypodium distachyon BRADI_2g15480v3 R-BDI-5606494 BRADI_2g15480v3 [plastid stroma] R-BDI-1119419 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119419 Lysine biosynthesis VI none Brachypodium distachyon BRADI_2g15610v3 R-BDI-1126713 BRADI_2g15610v3 [endosome] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_2g15610v3 R-BDI-5679319 BRADI_2g15610v3 [plasma membrane] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_2g15740v3 R-BDI-1128961 BRADI_2g15740v3 [mitochondrial matrix] R-BDI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119533 TCA cycle (plant) none Brachypodium distachyon BRADI_2g15790v3 R-BDI-1126157 BRADI_2g15790v3 [cytosol] R-BDI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119460 Isoleucine biosynthesis from threonine none Brachypodium distachyon BRADI_2g15790v3 R-BDI-1126157 BRADI_2g15790v3 [cytosol] R-BDI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119600 Valine biosynthesis none Brachypodium distachyon BRADI_2g15900v3 R-BDI-8933788 BRADI_2g15900v3 [nucleoplasm] R-BDI-8933811 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8933811 Circadian rhythm none Brachypodium distachyon BRADI_2g16610v3 R-BDI-5608184 BRADI_2g16610v3 [nucleoplasm] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_2g16710v3 R-BDI-1129926 BRADI_2g16710v3 [cytosol] R-BDI-1119532 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119532 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) none Brachypodium distachyon BRADI_2g16840v3 R-BDI-5654957 BRADI_2g16840v3 [Golgi lumen] R-BDI-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5654909 Xylan biosynthesis none Brachypodium distachyon BRADI_2g16850v3 R-BDI-1128214 BRADI_2g16850v3 [nucleoplasm] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_2g17192v3 R-BDI-5606380 BRADI_2g17192v3 [plastid stroma] R-BDI-1119535 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119535 Glutamate biosynthesis IV none Brachypodium distachyon BRADI_2g17230v3 R-BDI-9025372 BRADI_2g17230v3 [endoplasmic reticulum membrane] R-BDI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119402 Phospholipid biosynthesis I none Brachypodium distachyon BRADI_2g17280v3 R-BDI-9826667 BRADI_2g17280v3 [nucleoplasm] R-BDI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brachypodium distachyon BRADI_2g17620v3 R-BDI-1123935 BRADI_2g17620v3 [cytosol] R-BDI-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119262 Threonine biosynthesis from homoserine none Brachypodium distachyon BRADI_2g17680v3 R-BDI-8854127 BRADI_2g17680v3 [cytosol] R-BDI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119556 Choline biosynthesis I none Brachypodium distachyon BRADI_2g18090v3 R-BDI-8879034-3 HVA1 homolog [vacuolar lumen] R-BDI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8879007 Response to cold temperature none Brachypodium distachyon BRADI_2g18095v3 R-BDI-8879034 HVA1 homolog [vacuolar lumen] R-BDI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8879007 Response to cold temperature none Brachypodium distachyon BRADI_2g18106v3 R-BDI-8879034-2 HVA1 homolog [vacuolar lumen] R-BDI-8879007 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8879007 Response to cold temperature none Brachypodium distachyon BRADI_2g18290v3 R-BDI-9675857 BRADI_2g18290v3 [nucleoplasm] R-BDI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9675782 Maturation none Brachypodium distachyon BRADI_2g18510v3 R-BDI-4415101 BRADI_2g18510v3 [cytosol] R-BDI-3899351 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-3899351 Abscisic acid (ABA) mediated signaling none Brachypodium distachyon BRADI_2g18550v3 R-BDI-1124037 BRADI_2g18550v3 [mitochondrial matrix] R-BDI-1119289 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119289 Arginine degradation none Brachypodium distachyon BRADI_2g18690v3 R-BDI-8854108 BRADI_2g18690v3 [cytosol] R-BDI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119556 Choline biosynthesis I none Brachypodium distachyon BRADI_2g18810v3 R-BDI-1129175 BRADI_2g18810v3 [amyloplast] R-BDI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119477 Starch biosynthesis none Brachypodium distachyon BRADI_2g18820v3 R-BDI-1122560 BRADI_2g18820v3 [cytosol] R-BDI-1119331 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119331 Cysteine biosynthesis I none Brachypodium distachyon BRADI_2g19090v3 R-BDI-9607071 BRADI_2g19090v3 [mitochondrion] R-BDI-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9607185 Generation of superoxide radicals none Brachypodium distachyon BRADI_2g19367v3 R-BDI-1125997 BRADI_2g19367v3 [nucleoplasm] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_2g19640v3 R-BDI-1126560 BRADI_2g19640v3 [cytosol] R-BDI-1119516 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119516 Trehalose biosynthesis I none Brachypodium distachyon BRADI_2g19700v3 R-BDI-1123733 BRADI_2g19700v3 [cytosol] R-BDI-1119484 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119484 Folate polyglutamylation II none Brachypodium distachyon BRADI_2g19780v3 R-BDI-1123751 BRADI_2g19780v3 [cytosol] R-BDI-1119292 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119292 Cytokinins 7-N-glucoside biosynthesis none Brachypodium distachyon BRADI_2g19780v3 R-BDI-1123751 BRADI_2g19780v3 [cytosol] R-BDI-1119375 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119375 Cytokinins 9-N-glucoside biosynthesis none Brachypodium distachyon BRADI_2g19780v3 R-BDI-1123751 BRADI_2g19780v3 [cytosol] R-BDI-1119473 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119473 Cytokinins-O-glucoside biosynthesis none Brachypodium distachyon BRADI_2g19867v3 R-BDI-5608130 BRADI_2g19867v3 [nucleoplasm] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_2g19950v3 R-BDI-9658563 BRADI_2g19950v3 [endoplasmic reticulum lumen] R-BDI-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119502 Allantoin degradation none Brachypodium distachyon BRADI_2g20060v3 R-BDI-9826682 BRADI_2g20060v3 [nucleoplasm] R-BDI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brachypodium distachyon BRADI_2g20650v3 R-BDI-1129208 BRADI_2g20650v3 [chloroplast envelope] R-BDI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119402 Phospholipid biosynthesis I none Brachypodium distachyon BRADI_2g20990v3 R-BDI-8987535-3 BRADI_2g20990v3 [chloroplast] R-BDI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119312 Photorespiration none Brachypodium distachyon BRADI_2g21050v3 R-BDI-1122351 BRADI_2g21050v3 [cytosol] R-BDI-1119354 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119354 Asparagine biosynthesis III none Brachypodium distachyon BRADI_2g21050v3 R-BDI-5633281 BRADI_2g21050v3 [cytosol] R-BDI-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119495 Citrulline biosynthesis none Brachypodium distachyon BRADI_2g21050v3 R-BDI-1122351 BRADI_2g21050v3 [cytosol] R-BDI-1119553 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119553 Asparagine biosynthesis none Brachypodium distachyon BRADI_2g21150v3 R-BDI-9025317 BRADI_2g21150v3 [cytosol] R-BDI-1119402 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119402 Phospholipid biosynthesis I none Brachypodium distachyon BRADI_2g21180v3 R-BDI-9930304 ACA7 [plasma membrane] R-BDI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9766881 TF network involved in salinity response none Brachypodium distachyon BRADI_2g21250v3 R-BDI-9681928 BRADI_2g21250v3 [Golgi membrane] R-BDI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119574 UDP-L-arabinose biosynthesis and transport none Brachypodium distachyon BRADI_2g21290v3 R-BDI-9916302 BRADI_2g21290v3 [nucleoplasm] R-BDI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8934036 Long day regulated expression of florigens none Brachypodium distachyon BRADI_2g21290v3 R-BDI-9916302 BRADI_2g21290v3 [nucleoplasm] R-BDI-9916190 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9916190 Root angle formation: elongation and curvature response none Brachypodium distachyon BRADI_2g21300v3 R-BDI-1126996 BRADI_2g21300v3 [cytosol] R-BDI-1119316 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119316 Phenylpropanoid biosynthesis none Brachypodium distachyon BRADI_2g22050v3 R-BDI-9924543 CYP714D1/EUI1 [endoplasmic reticulum membrane] R-BDI-9924511 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9924511 Strigolactone-mediated axillary bud dormancy and suppression of tillering none Brachypodium distachyon BRADI_2g22360v3 R-BDI-9640767 BRADI_2g22360v3 [nucleoplasm] R-BDI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9640882 Assembly of pre-replication complex none Brachypodium distachyon BRADI_2g22360v3 R-BDI-9640767 BRADI_2g22360v3 [nucleoplasm] R-BDI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9645850 Activation of pre-replication complex none Brachypodium distachyon BRADI_2g22360v3 R-BDI-9640767 BRADI_2g22360v3 [nucleoplasm] R-BDI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9675824 DNA replication Initiation none Brachypodium distachyon BRADI_2g22410v3 R-BDI-1129539 BRADI_2g22410v3 [cytosol] R-BDI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119610 Biotin biosynthesis II none Brachypodium distachyon BRADI_2g22440v3 R-BDI-9826697 BRADI_2g22440v3 [nucleoplasm] R-BDI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brachypodium distachyon BRADI_2g23126v3 R-BDI-1123913 BRADI_2g23126v3 [cytosol] R-BDI-1119300 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119300 Glycolipid desaturation none Brachypodium distachyon BRADI_2g23220v3 R-BDI-1126172 BRADI_2g23220v3 [cytosol] R-BDI-1119379 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119379 Flavin biosynthesis none Brachypodium distachyon BRADI_2g23507v3 R-BDI-1127913 BRADI_2g23507v3 [cytosol] R-BDI-1119495 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119495 Citrulline biosynthesis none Brachypodium distachyon BRADI_2g23507v3 R-BDI-1127913 BRADI_2g23507v3 [cytosol] R-BDI-1119631 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119631 Proline biosynthesis I none Brachypodium distachyon BRADI_2g23730v3 R-BDI-6787071 BRADI_2g23730v3 [cytosol] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_2g23890v3 R-BDI-6788154 BRADI_2g23890v3 [nucleoplasm] R-BDI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6788019 Salicylic acid signaling none Brachypodium distachyon BRADI_2g23996v3 R-BDI-9930249 BRADI_2g23996v3 [nucleoplasm] R-BDI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9766881 TF network involved in salinity response none Brachypodium distachyon BRADI_2g25285v3 R-BDI-1126636-2 BRADI_2g25285v3 [cytosol] R-BDI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119370 Sterol biosynthesis none Brachypodium distachyon BRADI_2g25300v3 R-BDI-1126636 BRADI_2g25300v3 [cytosol] R-BDI-1119370 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119370 Sterol biosynthesis none Brachypodium distachyon BRADI_2g25360v3 R-BDI-1127916 BRADI_2g25360v3 [plastid stroma] R-BDI-1119367 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119367 Polyisoprenoid biosynthesis none Brachypodium distachyon BRADI_2g25360v3 R-BDI-1127916 BRADI_2g25360v3 [plastid stroma] R-BDI-1119615 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119615 Mevalonate pathway none Brachypodium distachyon BRADI_2g25550v3 R-BDI-4723654 BRADI_2g25550v3 [plastid stroma] R-BDI-1119464 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119464 Methylerythritol phosphate pathway none Brachypodium distachyon BRADI_2g25550v3 R-BDI-1130030 BRADI_2g25550v3 [cytosol] R-BDI-1119594 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119594 Pyridoxal 5'-phosphate biosynthesis none Brachypodium distachyon BRADI_2g25550v3 R-BDI-1130030 BRADI_2g25550v3 [cytosol] R-BDI-1119629 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119629 Thiamine biosynthesis none Brachypodium distachyon BRADI_2g25600v3 R-BDI-5679398 BRADI_2g25600v3 [cytosol] R-BDI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5679411 Gibberellin signaling none Brachypodium distachyon BRADI_2g25930v3 R-BDI-1123337 BRADI_2g25930v3 [plastid stroma] R-BDI-1119509 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119509 Histidine biosynthesis I none Brachypodium distachyon BRADI_2g26170v3 R-BDI-9918267 ISA2 [amyloplast] R-BDI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119477 Starch biosynthesis none Brachypodium distachyon BRADI_2g26987v3 R-BDI-9675464 BRADI_2g26987v3 [nucleoplasm] R-BDI-9030654 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9030654 Primary root development none Brachypodium distachyon BRADI_2g27150v3 R-BDI-1124657 BRADI_2g27150v3 [cytosol] R-BDI-1119595 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119595 Mannose degradation none Brachypodium distachyon BRADI_2g27150v3 R-BDI-1124657 BRADI_2g27150v3 [cytosol] R-BDI-1119601 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119601 Trehalose degradation II none Brachypodium distachyon BRADI_2g27150v3 R-BDI-1124657 BRADI_2g27150v3 [cytosol] R-BDI-1119628 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119628 GDP-mannose metabolism none Brachypodium distachyon BRADI_2g27920v3 R-BDI-9826699 BRADI_2g27920v3 [nucleoplasm] R-BDI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brachypodium distachyon BRADI_2g28460v3 R-BDI-1124190 BRADI_2g28460v3 [plastid stroma] R-BDI-1119412 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119412 Chlorophyll a biosynthesis I none Brachypodium distachyon BRADI_2g30580v3 R-BDI-1129811 BRADI_2g30580v3 [mitochondrion] R-BDI-1119403 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119403 Removal of superoxide radicals none Brachypodium distachyon BRADI_2g30695v3 R-BDI-6787257 BRADI_2g30695v3 [nucleoplasm] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_2g30695v3 R-BDI-6787976 BRADI_2g30695v3 [cytosol] R-BDI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6788019 Salicylic acid signaling none Brachypodium distachyon BRADI_2g30695v3 R-BDI-6787257 BRADI_2g30695v3 [nucleoplasm] R-BDI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6788019 Salicylic acid signaling none Brachypodium distachyon BRADI_2g31510v3 R-BDI-1127076 BRADI_2g31510v3 [cytosol] R-BDI-1119418 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119418 Suberin biosynthesis none Brachypodium distachyon BRADI_2g31510v3 R-BDI-1127076 BRADI_2g31510v3 [cytosol] R-BDI-1119582 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119582 Phenylpropanoid biosynthesis, initial reactions none Brachypodium distachyon BRADI_2g31580v3 R-BDI-9640786 BRADI_2g31580v3 [nucleoplasm] R-BDI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9640882 Assembly of pre-replication complex none Brachypodium distachyon BRADI_2g31580v3 R-BDI-9640786 BRADI_2g31580v3 [nucleoplasm] R-BDI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9645850 Activation of pre-replication complex none Brachypodium distachyon BRADI_2g31580v3 R-BDI-9640786 BRADI_2g31580v3 [nucleoplasm] R-BDI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9675824 DNA replication Initiation none Brachypodium distachyon BRADI_2g31820v3 R-BDI-1126165 BRADI_2g31820v3 [nucleoplasm] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_2g33686v3 R-BDI-1128244 BRADI_2g33686v3 [chloroplast] R-BDI-1119348 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119348 Ent-kaurene biosynthesis none Brachypodium distachyon BRADI_2g34240v3 R-BDI-1130088 BRADI_2g34240v3 [plasma membrane] R-BDI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119314 Cellulose biosynthesis none Brachypodium distachyon BRADI_2g34290v3 R-BDI-1125906 BRADI_2g34290v3 [cytosol] R-BDI-1119276 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119276 Choline biosynthesis III none Brachypodium distachyon BRADI_2g34400v3 R-BDI-1126549 BRADI_2g34400v3 [cytosol] R-BDI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119486 IAA biosynthesis I none Brachypodium distachyon BRADI_2g35720v3 R-BDI-5608164 BRADI_2g35720v3 [nucleoplasm] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_2g35720v3 R-BDI-5608164 BRADI_2g35720v3 [nucleoplasm] R-BDI-9030557 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9030557 Lateral root initiation none Brachypodium distachyon BRADI_2g35720v3 R-BDI-5608164 BRADI_2g35720v3 [nucleoplasm] R-BDI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9608575 Reproductive meristem phase change none Brachypodium distachyon BRADI_2g35720v3 R-BDI-9658967 BRADI_2g35720v3 [cytosol] R-BDI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9608575 Reproductive meristem phase change none Brachypodium distachyon BRADI_2g36370v3 R-BDI-5632341 BRADI_2g36370v3 [cytosol] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_2g36370v3 R-BDI-5632221 phospho-BRADI_2g36370v3 [cytosol] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_2g36370v3 R-BDI-5632170 phospho-BRADI_2g36370v3 [nucleoplasm] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_2g36730v3 R-BDI-9826643 BRADI_2g36730v3 [nucleoplasm] R-BDI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brachypodium distachyon BRADI_2g37400v3 R-BDI-1124742 BRADI_2g37400v3 [cytosol] R-BDI-1119410 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119410 Ascorbate biosynthesis none Brachypodium distachyon BRADI_2g37400v3 R-BDI-1124742 BRADI_2g37400v3 [cytosol] R-BDI-1119570 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119570 Cytosolic glycolysis none Brachypodium distachyon BRADI_2g37680v3 R-BDI-9639217 BRADI_2g37680v3 [plasma membrane] R-BDI-9639136 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9639136 Response to Aluminum stress none Brachypodium distachyon BRADI_2g37850v3 R-BDI-9681885 BRADI_2g37850v3 [Golgi membrane] R-BDI-1119574 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119574 UDP-L-arabinose biosynthesis and transport none Brachypodium distachyon BRADI_2g37970v3 R-BDI-5654933 BRADI_2g37970v3 [Golgi lumen] R-BDI-5654909 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5654909 Xylan biosynthesis none Brachypodium distachyon BRADI_2g38100v3 R-BDI-9611863 BRADI_2g38100v3 [mitochondrial matrix] R-BDI-1119479 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119479 Valine degradation none Brachypodium distachyon BRADI_2g38340v3 R-BDI-1127481 BRADI_2g38340v3 [cytosol] R-BDI-1119342 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119342 Gamma-glutamyl cycle none Brachypodium distachyon BRADI_2g38340v3 R-BDI-1127481 BRADI_2g38340v3 [cytosol] R-BDI-1119483 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119483 Glutathione biosynthesis none Brachypodium distachyon BRADI_2g38350v3 R-BDI-5138505 BRADI_2g38350v3 [plastid stroma] R-BDI-1119263 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119263 Arginine biosynthesis none Brachypodium distachyon BRADI_2g38350v3 R-BDI-5138505 BRADI_2g38350v3 [plastid stroma] R-BDI-1119539 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119539 Ornithine biosynthesis none Brachypodium distachyon BRADI_2g38350v3 R-BDI-5138505 BRADI_2g38350v3 [plastid stroma] R-BDI-1119622 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119622 Arginine biosynthesis II (acetyl cycle) none Brachypodium distachyon BRADI_2g38390v3 R-BDI-9826705 OSH71 [nucleoplasm] R-BDI-9826782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9826782 Regulation of seed germination and coleoptile growth under submergence and normal gravity environment none Brachypodium distachyon BRADI_2g38877v3 R-BDI-9645809 BRADI_2g38877v3 [nucleoplasm] R-BDI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9645850 Activation of pre-replication complex none Brachypodium distachyon BRADI_2g38877v3 R-BDI-9645809 BRADI_2g38877v3 [nucleoplasm] R-BDI-9675782 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9675782 Maturation none Brachypodium distachyon BRADI_2g38877v3 R-BDI-9645809 BRADI_2g38877v3 [nucleoplasm] R-BDI-9675885 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9675885 Lagging strand synthesis none Brachypodium distachyon BRADI_2g38970v3 R-BDI-9611477 phospho-phosphorylated-RLCK176 [cytosol] R-BDI-9611432 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9611432 Recognition of fungal and bacterial pathogens and immunity response none Brachypodium distachyon BRADI_2g39790v3 R-BDI-1124935-2 BRADI_2g39790v3 [cytosol] R-BDI-1119349 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119349 S-methylmethionine cycle none Brachypodium distachyon BRADI_2g40470v3 R-BDI-5655090-3 BRADI_2g40470v3 [Golgi lumen] R-BDI-5655101 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5655101 Xyloglucan biosynthesis none Brachypodium distachyon BRADI_2g40600v3 R-BDI-9640761 BRADI_2g40600v3 [nucleoplasm] R-BDI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9640882 Assembly of pre-replication complex none Brachypodium distachyon BRADI_2g40600v3 R-BDI-9640761 BRADI_2g40600v3 [nucleoplasm] R-BDI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9645850 Activation of pre-replication complex none Brachypodium distachyon BRADI_2g40600v3 R-BDI-9640761 BRADI_2g40600v3 [nucleoplasm] R-BDI-9675824 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9675824 DNA replication Initiation none Brachypodium distachyon BRADI_2g40860v3 R-BDI-1127491 BRADI_2g40860v3 [chloroplast] R-BDI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119312 Photorespiration none Brachypodium distachyon BRADI_2g41300v3 R-BDI-2685730 BRADI_2g41300v3 [cytosol] R-BDI-1119580 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119580 IAA biosynthesis II none Brachypodium distachyon BRADI_2g41550v3 R-BDI-5679401 BRADI_2g41550v3 [nucleoplasm] R-BDI-5679411 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5679411 Gibberellin signaling none Brachypodium distachyon BRADI_2g41590v3 R-BDI-9918222 BRADI_2g41590v3 [amyloplast] R-BDI-1119477 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119477 Starch biosynthesis none Brachypodium distachyon BRADI_2g41817v3 R-BDI-8858194 BRADI_2g41817v3 [cytosol] R-BDI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119556 Choline biosynthesis I none Brachypodium distachyon BRADI_2g42190v3 R-BDI-9608693 BRADI_2g42190v3 [cytosol] R-BDI-9608575 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9608575 Reproductive meristem phase change none Brachypodium distachyon BRADI_2g43557v3 R-BDI-9684771 BRADI_2g43557v3 [cytosol] R-BDI-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9609102 Flower development none Brachypodium distachyon BRADI_2g43797v3 R-BDI-9684771-2 BRADI_2g43797v3 [cytosol] R-BDI-9609102 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9609102 Flower development none Brachypodium distachyon BRADI_2g44090v3 R-BDI-5632188 BRADI_2g44090v3 [nucleoplasm] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_2g44270v3 R-BDI-6787257-2 BRADI_2g44270v3 [nucleoplasm] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_2g44270v3 R-BDI-6787976-2 BRADI_2g44270v3 [cytosol] R-BDI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6788019 Salicylic acid signaling none Brachypodium distachyon BRADI_2g44270v3 R-BDI-6787257-2 BRADI_2g44270v3 [nucleoplasm] R-BDI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6788019 Salicylic acid signaling none Brachypodium distachyon BRADI_2g44550v3 R-BDI-1125570 BRADI_2g44550v3 [cytosol] R-BDI-1119450 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119450 Homocysteine biosynthesis none Brachypodium distachyon BRADI_2g44856v3 R-BDI-1130327 BRADI_2g44856v3 [cytosol] R-BDI-1119586 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119586 Cyanate degradation none Brachypodium distachyon BRADI_2g44880v3 R-BDI-1123694 BRADI_2g44880v3 [plastid stroma] R-BDI-1119274 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119274 Monoterpene biosynthesis none Brachypodium distachyon BRADI_2g44880v3 R-BDI-1123694 BRADI_2g44880v3 [plastid stroma] R-BDI-1119593 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119593 Oleoresin monoterpene volatiles biosynthesis none Brachypodium distachyon BRADI_2g44987v3 R-BDI-1128126 BRADI_2g44987v3 [endosome] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_2g44987v3 R-BDI-5679348 BRADI_2g44987v3 [plasma membrane] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_2g45105v3 R-BDI-1126875 BRADI_2g45105v3 [cytosol] R-BDI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119486 IAA biosynthesis I none Brachypodium distachyon BRADI_2g45200v3 R-BDI-1128071 BRADI_2g45200v3 [mitochondrial matrix] R-BDI-1119533 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119533 TCA cycle (plant) none Brachypodium distachyon BRADI_2g45330v3 R-BDI-1122727 BRADI_2g45330v3 [cytosol] R-BDI-1119460 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119460 Isoleucine biosynthesis from threonine none Brachypodium distachyon BRADI_2g45330v3 R-BDI-1122727 BRADI_2g45330v3 [cytosol] R-BDI-1119600 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119600 Valine biosynthesis none Brachypodium distachyon BRADI_2g45550v3 R-BDI-5654816 BRADI_2g45550v3 [nucleoplasm] R-BDI-5654828 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5654828 Strigolactone signaling none Brachypodium distachyon BRADI_2g45757v3 R-BDI-4752547 BRADI_2g45757v3 [plastid stroma] R-BDI-1119498 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119498 Phylloquinone biosynthesis none Brachypodium distachyon BRADI_2g46040v3 R-BDI-9612372 BRADI_2g46040v3 [mitochondrial matrix] R-BDI-1119612 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119612 Cysteine degradation none Brachypodium distachyon BRADI_2g46190v3 R-BDI-5608132 BRADI_2g46190v3 [nucleoplasm] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_2g46420v3 R-BDI-1124692 BRADI_2g46420v3 [nucleoplasm] R-BDI-5608118 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5608118 Auxin signalling none Brachypodium distachyon BRADI_2g46527v3 R-BDI-9640723 BRADI_2g46527v3 [nucleoplasm] R-BDI-9640887 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9640887 G1/S transition none Brachypodium distachyon BRADI_2g46670v3 R-BDI-1129859 BRADI_2g46670v3 [chloroplast stroma] R-BDI-1119443 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119443 Ammonia assimilation cycle none Brachypodium distachyon BRADI_2g46670v3 R-BDI-5606382 BRADI_2g46670v3 [plastid stroma] R-BDI-1119535 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119535 Glutamate biosynthesis IV none Brachypodium distachyon BRADI_2g46690v3 R-BDI-8987467 BRADI_2g46690v3 [chloroplast] R-BDI-1119502 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119502 Allantoin degradation none Brachypodium distachyon BRADI_2g46720v3 R-BDI-9640785 BRADI_2g46720v3 [nucleoplasm] R-BDI-9640882 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9640882 Assembly of pre-replication complex none Brachypodium distachyon BRADI_2g46720v3 R-BDI-9640785 BRADI_2g46720v3 [nucleoplasm] R-BDI-9645850 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9645850 Activation of pre-replication complex none Brachypodium distachyon BRADI_2g47100v3 R-BDI-5632121 BRADI_2g47100v3 [nucleoplasm] R-BDI-5632095 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5632095 Brassinosteroid signaling none Brachypodium distachyon BRADI_2g47240v3 R-BDI-1130059 BRADI_2g47240v3 [cytosol] R-BDI-1119262 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119262 Threonine biosynthesis from homoserine none Brachypodium distachyon BRADI_2g47290v3 R-BDI-1124970 BRADI_2g47290v3 [cytosol] R-BDI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119556 Choline biosynthesis I none Brachypodium distachyon BRADI_2g47610v3 R-BDI-1130006 BRADI_2g47610v3 [plastid stroma] R-BDI-1119569 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119569 Kievitone biosynthesis none Brachypodium distachyon BRADI_2g47730v3 R-BDI-6787238 BRADI_2g47730v3 [nucleoplasm] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_2g47960v3 R-BDI-9658664 BRADI_2g47960v3 [plasma membrane] R-BDI-1119567 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119567 Beta-alanine biosynthesis I none Brachypodium distachyon BRADI_2g48010v3 R-BDI-8987557 BRADI_2g48010v3 [mitochondrial matrix] R-BDI-1119312 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119312 Photorespiration none Brachypodium distachyon BRADI_2g48057v3 R-BDI-8934263 BRADI_2g48057v3 [nucleoplasm] R-BDI-8934036 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8934036 Long day regulated expression of florigens none Brachypodium distachyon BRADI_2g48090v3 R-BDI-6787204 BRADI_2g48090v3 [nucleoplasm] R-BDI-6787011 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6787011 Jasmonic acid signaling none Brachypodium distachyon BRADI_2g48170v3 R-BDI-8858063 BRADI_2g48170v3 [plasma membrane] R-BDI-8858053 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-8858053 Polar auxin transport none Brachypodium distachyon BRADI_2g48230v3 R-BDI-1129466 BRADI_2g48230v3 [cytosol] R-BDI-1119449 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119449 Carotenoid biosynthesis none Brachypodium distachyon BRADI_2g48260v3 R-BDI-8854110 BRADI_2g48260v3 [cytosol] R-BDI-1119556 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119556 Choline biosynthesis I none Brachypodium distachyon BRADI_2g48590v3 R-BDI-1127753 BRADI_2g48590v3 [cytosol] R-BDI-1119278 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119278 PRPP biosynthesis I none Brachypodium distachyon BRADI_2g48980v3 R-BDI-1124809 BRADI_2g48980v3 [cytosol] R-BDI-1119486 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119486 IAA biosynthesis I none Brachypodium distachyon BRADI_2g49040v3 R-BDI-9607105 BRADI_2g49040v3 [mitochondrion] R-BDI-9607185 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9607185 Generation of superoxide radicals none Brachypodium distachyon BRADI_2g49200v3 R-BDI-1127292 BRADI_2g49200v3 [plastid stroma] R-BDI-1119545 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119545 Geranylgeranyldiphosphate biosynthesis II (plastidic) none Brachypodium distachyon BRADI_2g49257v3 R-BDI-1126444-2 BRADI_2g49257v3 [cytosol] R-BDI-1119610 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119610 Biotin biosynthesis II none Brachypodium distachyon BRADI_2g49420v3 R-BDI-1126981 BRADI_2g49420v3 [nucleoplasm] R-BDI-9030680 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9030680 Crown root development none Brachypodium distachyon BRADI_2g49670v3 R-BDI-5367761 BRADI_2g49670v3 [plastid stroma] R-BDI-5367729 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-5367729 Strigolactone biosynthesis none Brachypodium distachyon BRADI_2g49906v3 R-BDI-6788120 BRADI_2g49906v3 [nucleoplasm] R-BDI-6788019 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-6788019 Salicylic acid signaling none Brachypodium distachyon BRADI_2g49906v3 R-BDI-6788120 BRADI_2g49906v3 [nucleoplasm] R-BDI-9766881 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-9766881 TF network involved in salinity response none Brachypodium distachyon BRADI_2g49912v3 R-BDI-1124491 BRADI_2g49912v3 [plasma membrane] R-BDI-1119314 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119314 Cellulose biosynthesis none Brachypodium distachyon BRADI_2g50040v3 R-BDI-1124083 BRADI_2g50040v3 [cytosol] R-BDI-1119323 https://plantreactome.gramene.org/PathwayBrowser/#/R-BDI-1119323 Lipid-A-precursor biosynthesis none Brac