Plant Reactome Pathway Database

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 Plant Reactome Pathway Database

  • About
    • What is Plant Reactome ?
    • Team
    • Scientific Advisory Board
    • License Agreement
    • Disclaimer
    • Staff
  • Content
    • Data Schema
    • Release Summary
  • Docs
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      • Graph Database
      • Content Service
      • Pathways Overview
      • Pathway Diagrams
    • Data Model
    • Computational Inference
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Schema > Pathway > Entries

Seed development

Go to Details
created [InstanceEdit:11086351] Elser, Justin, 2025-03-26
dbId 11099923
displayName Seed development
eventOf
  • [Pathway:R-ZMA-9031669] Reproductive structure development - Zea mays
evidenceType [EvidenceType:9939645] inferred by electronic annotation
goBiologicalProcess [GO_BiologicalProcess:160119] seed development
hasDiagram true
hasEvent
  • [Pathway:R-ZMA-9626305] Regulatory network of nutrient accumulation - Zea mays
  • [Pathway:R-ZMA-9035605] Regulation of seed size - Zea mays
inferredFrom
  • [Pathway:R-OSA-9623902] Seed development - Oryza sativa
isInDisease false
isInferred true
name
  • Seed development
releaseDate 2025-02-15
schemaClass Pathway
species
  • [Species:9030233] Zea mays
stId R-ZMA-9623902
summation
  • [Summation:9939644] This event has been computationally inferred from an event that has been demonstrated in another species.

    The inference is based on the homology mappings from Ensembl Compara. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 1% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.

    More details and caveats of the event inference in Reactome.

Referrals

(hasEvent)
  • [Pathway:R-ZMA-9031669] Reproductive structure development - Zea mays
(inferredTo)
  • [Pathway:R-OSA-9623902] Seed development - Oryza sativa
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