Plant Reactome Pathway Database

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 Plant Reactome Pathway Database

  • About
    • What is Plant Reactome ?
    • Team
    • Scientific Advisory Board
    • License Agreement
    • Disclaimer
    • Staff
  • Content
    • Data Schema
    • Release Summary
  • Docs
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      • Pathway Diagrams
    • Data Model
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Schema > BlackBoxEvent > Entries

Expression of GATB

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compartment
  • [Compartment:5460] mitochondrial matrix
  • [Compartment:7660] nucleoplasm
created [InstanceEdit:10992009] Elser, Justin, 2025-03-25
dbId 11000399
displayName Expression of GATB
eventOf
  • [Pathway:R-TPR-9030654] Primary root development - Trifolium pratense
evidenceType [EvidenceType:9939645] inferred by electronic annotation
inferredFrom
  • [BlackBoxEvent:R-OSA-9675527] Expression of GATB - Oryza sativa
isInDisease false
isInferred true
name
  • Expression of GATB
output
  • [EntityWithAccessionedSequence:R-TPR-9675439] Tp57577_TGAC_v2_gene38256 [mitochondrial matrix]
releaseDate 2025-02-15
schemaClass BlackBoxEvent
species
  • [Species:9030292] Trifolium pratense
stId R-TPR-9675527
summation
  • [Summation:9939644] This event has been computationally inferred from an event that has been demonstrated in another species.

    The inference is based on the homology mappings from Ensembl Compara. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 1% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.

    More details and caveats of the event inference in Reactome.

Referrals

(hasEvent)
  • [Pathway:R-TPR-9030654] Primary root development - Trifolium pratense
(inferredTo)
  • [BlackBoxEvent:R-OSA-9675527] Expression of GATB - Oryza sativa
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