Plant Reactome Pathway Database

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 Plant Reactome Pathway Database

  • About
    • What is Plant Reactome ?
    • Team
    • Scientific Advisory Board
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    • Disclaimer
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  • Content
    • Data Schema
    • Release Summary
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Schema > Pathway > Entries

Pyridoxamine anabolism

Go to Details
compartment
  • [Compartment:70101] cytosol
created [InstanceEdit:11357575] Elser, Justin, 2025-03-26
dbId 11368409
displayName Pyridoxamine anabolism
eventOf
  • [Pathway:R-SCR-2867929] Cofactor biosyntheses - Secale cereale
evidenceType [EvidenceType:9939645] inferred by electronic annotation
hasDiagram true
hasEvent
  • [Reaction:R-SCR-1119860] Pyridoxal kinase - Secale cereale
inferredFrom
  • [Pathway:R-OSA-1119303] Pyridoxamine anabolism - Oryza sativa
isInDisease false
isInferred true
name
  • Pyridoxamine anabolism
  • pathway101509
releaseDate 2025-02-15
schemaClass Pathway
species
  • [Species:9823417] Secale cereale
stId R-SCR-1119303
summation
  • [Summation:9939644] This event has been computationally inferred from an event that has been demonstrated in another species.

    The inference is based on the homology mappings from Ensembl Compara. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 1% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.

    More details and caveats of the event inference in Reactome.

Referrals

(hasEvent)
  • [Pathway:R-SCR-2867929] Cofactor biosyntheses - Secale cereale
(inferredTo)
  • [Pathway:R-OSA-1119303] Pyridoxamine anabolism - Oryza sativa
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