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About
What is Plant Reactome ?
Team
Scientific Advisory Board
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Staff
Content
Data Schema
Release Summary
Docs
User Guide
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Graph Database
Content Service
Pathways Overview
Pathway Diagrams
Data Model
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Schema
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EntityWithAccessionedSequence
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Entries
TOPBP1 [nucleoplasm]
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created
[InstanceEdit:9646027] Gupta, Parul, 2019-05-17
dbId
9645941
displayName
TOPBP1 [nucleoplasm]
endCoordinate
-1
inDisease
false
inferredTo
[EntityWithAccessionedSequence:R-PHH-9645941] GQ55_8G054800 [nucleoplasm] - Panicum hallii var. hallii ("HAL2")
[EntityWithAccessionedSequence:R-ZMY-9645941] Zm00001eb091010 [nucleoplasm] - Zea mays ver5
[EntityWithAccessionedSequence:R-ACO-9645941] Aco003287.1.path1 [nucleoplasm] - Ananas comosus
[EntityWithAccessionedSequence:R-CCL-9645941] CICLE_v10000159mg [nucleoplasm] - Citrus clementina
[EntityWithAccessionedSequence:R-ECU-9645941] EJB05_28784 [nucleoplasm] - Eragrostis curvula
[EntityWithAccessionedSequence:R-ECU-9645941-2] EJB05_28761 [nucleoplasm] - Eragrostis curvula
[EntityWithAccessionedSequence:R-ECU-9645941-3] EJB05_51695 [nucleoplasm] - Eragrostis curvula
[DefinedSet:R-ECU-9645941-4] Homologues of TOPBP1 [nucleoplasm] - Eragrostis curvula
[EntityWithAccessionedSequence:R-OES-9645941] OE9A104067 [nucleoplasm] - Olea europaea var. sylvestris
[EntityWithAccessionedSequence:R-PVE-9645941] EVM0011505 [nucleoplasm] - Pistacia vera
[EntityWithAccessionedSequence:R-SSP-9645941] Sspon.05G0017690-1A [nucleoplasm] - Saccharum spontaneum
[EntityWithAccessionedSequence:R-SSP-9645941-2] Sspon.05G0017690-3C [nucleoplasm] - Saccharum spontaneum
[EntityWithAccessionedSequence:R-SSP-9645941-3] Sspon.05G0017690-2B [nucleoplasm] - Saccharum spontaneum
[DefinedSet:R-SSP-9645941-4] Homologues of TOPBP1 [nucleoplasm] - Saccharum spontaneum
[EntityWithAccessionedSequence:R-AOF-9645941] A4U43_C09F2240 [nucleoplasm] - Asparagus officinalis
[EntityWithAccessionedSequence:R-CSC-9645941] novel_gene_1886_5bd9a17a [nucleoplasm] - Cannabis sativa
[EntityWithAccessionedSequence:R-CSC-9645941-2] evm.TU.01.2736 [nucleoplasm] - Cannabis sativa
[DefinedSet:R-CSC-9645941-3] Homologues of TOPBP1 [nucleoplasm] - Cannabis sativa
[EntityWithAccessionedSequence:R-CCD-9645941] Ccrd_023116 [nucleoplasm] - Cynara cardunculus var. scolymus
[EntityWithAccessionedSequence:R-ETE-9645941] Et_6B_049352 [nucleoplasm] - Eragrostis tef
[EntityWithAccessionedSequence:R-ETE-9645941-2] Et_6A_047424 [nucleoplasm] - Eragrostis tef
[DefinedSet:R-ETE-9645941-3] Homologues of TOPBP1 [nucleoplasm] - Eragrostis tef
[EntityWithAccessionedSequence:R-MPO-9645941] Mp2g09610 [nucleoplasm] - Marchantia polymorpha
[EntityWithAccessionedSequence:R-CCN-9645941] GSCOC_T00018358001 [nucleoplasm] - Coffea canephora
[EntityWithAccessionedSequence:R-TTU-9645941] TRITD4Bv1G036750 [nucleoplasm] - Triticum turgidum
[EntityWithAccessionedSequence:R-TTU-9645941-2] TRITD4Av1G165740 [nucleoplasm] - Triticum turgidum
[DefinedSet:R-TTU-9645941-3] Homologues of TOPBP1 [nucleoplasm] - Triticum turgidum
[EntityWithAccessionedSequence:R-MDO-9645941] MD08G0132500 [nucleoplasm] - Malus domestica
[EntityWithAccessionedSequence:R-ACH-9645941] CEY00_Acc12291 [nucleoplasm] - Actinidia chinensis
[EntityWithAccessionedSequence:R-ATA-9645941] AET4Gv20205600 [nucleoplasm] - Aegilops tauschii
[EntityWithAccessionedSequence:R-ATR-9645941] AMTR_s00013p00056780 [nucleoplasm] - Amborella trichopoda
[EntityWithAccessionedSequence:R-AHA-9645941] g01289 [nucleoplasm] - Arabidopsis halleri
[EntityWithAccessionedSequence:R-ALY-9645941] scaffold_202694.1 [nucleoplasm] - Arabidopsis lyrata
[EntityWithAccessionedSequence:R-ATH-9645941] AT1G77320 [nucleoplasm] - Arabidopsis thaliana
[EntityWithAccessionedSequence:R-BVU-9645941] BVRB_1g010110 [nucleoplasm] - Beta vulgaris
[EntityWithAccessionedSequence:R-BDI-9645941] BRADI_4g23417v3 [nucleoplasm] - Brachypodium distachyon
[EntityWithAccessionedSequence:R-BNA-9645941] GSBRNA2T00146517001 [nucleoplasm] - Brassica napus
[EntityWithAccessionedSequence:R-BNA-9645941-2] GSBRNA2T00147881001 [nucleoplasm] - Brassica napus
[DefinedSet:R-BNA-9645941-3] Homologues of TOPBP1 [nucleoplasm] - Brassica napus
[EntityWithAccessionedSequence:R-BOL-9645941] Bo6g121260 [nucleoplasm] - Brassica oleracea
[EntityWithAccessionedSequence:R-BRA-9645941] A07p049920.1_BraROA [nucleoplasm] - Brassica rapa
[EntityWithAccessionedSequence:R-CCP-9645941] CCACVL1_30486 [nucleoplasm] - Corchorus capsularis
[EntityWithAccessionedSequence:R-DRO-9645941] DRNTG_05669 [nucleoplasm] - Dioscorea rotundata
[EntityWithAccessionedSequence:R-GMA-9645941] GLYMA_16G005600 [nucleoplasm] - Glycine max
[EntityWithAccessionedSequence:R-GRA-9645941] B456_013G107700 [nucleoplasm] - Gossypium raimondii
[EntityWithAccessionedSequence:R-HAN-9645941] HanXRQr2_Chr02g0064511 [nucleoplasm] - Helianthus annuus
[EntityWithAccessionedSequence:R-HVU-9645941] HORVU.MOREX.r3.4HG0347060 [nucleoplasm] - Hordeum vulgare
[EntityWithAccessionedSequence:R-LPE-9645941] LPERR11G05040 [nucleoplasm] - Leersia perrieri
[EntityWithAccessionedSequence:R-LAN-9645941] TanjilG_13894 [nucleoplasm] - Lupinus angustifolius
[EntityWithAccessionedSequence:R-MES-9645941] Manes.02G168200.v8.1 [nucleoplasm] - Manihot esculenta
[EntityWithAccessionedSequence:R-MTR-9645941] gene1397 [nucleoplasm] - Medicago truncatula
[EntityWithAccessionedSequence:R-MAC-9645941] Ma06_g25500 [nucleoplasm] - Musa acuminata
[EntityWithAccessionedSequence:R-OBA-9645941] OBART11G05560 [nucleoplasm] - Oryza barthii
[EntityWithAccessionedSequence:R-OBR-9645941] OB11G14450 [nucleoplasm] - Oryza brachyantha
[EntityWithAccessionedSequence:R-OGL-9645941] ORGLA11G0051200 [nucleoplasm] - Oryza glaberrima
[EntityWithAccessionedSequence:R-OGU-9645941] OGLUM11G05360 [nucleoplasm] - Oryza glumaepatula
[EntityWithAccessionedSequence:R-OLO-9645941] KN538683.1_FG005 [nucleoplasm] - Oryza longistaminata
[EntityWithAccessionedSequence:R-ONI-9645941] ONIVA11G05930 [nucleoplasm] - Oryza nivara
[EntityWithAccessionedSequence:R-OPU-9645941] OPUNC11G05270 [nucleoplasm] - Oryza punctata
[EntityWithAccessionedSequence:R-ORU-9645941] ORUFI11G05400 [nucleoplasm] - Oryza rufipogon
[EntityWithAccessionedSequence:R-OSI-9645941] BGIOSGA034971 [nucleoplasm] - Oryza sativa Indica Group
[EntityWithAccessionedSequence:R-PHA-9645941] GQ55_8G054800 [nucleoplasm] - Panicum hallii ("FIL2")
[EntityWithAccessionedSequence:R-PVU-9645941] PHAVU_001G070600g [nucleoplasm] - Phaseolus vulgaris
[EntityWithAccessionedSequence:R-PVU-9645941-2] PHAVU_002G0782001g [nucleoplasm] - Phaseolus vulgaris
[DefinedSet:R-PVU-9645941-3] Homologues of TOPBP1 [nucleoplasm] - Phaseolus vulgaris
[EntityWithAccessionedSequence:R-PPA-9645941] Pp3c3_700 [nucleoplasm] - Physcomitrella patens
[EntityWithAccessionedSequence:R-PTI-9645941] Potri.005G182500.v4.1 [nucleoplasm] - Populus trichocarpa
[EntityWithAccessionedSequence:R-PPE-9645941] PRUPE_1G489800 [nucleoplasm] - Prunus persica
[EntityWithAccessionedSequence:R-SIT-9645941] SETIT_0259142mg [nucleoplasm] - Setaria italica
[EntityWithAccessionedSequence:R-SBI-9645941] SORBI_3005G068800 [nucleoplasm] - Sorghum bicolor
[EntityWithAccessionedSequence:R-TCA-9645941] TCM_035208 [nucleoplasm] - Theobroma cacao
[EntityWithAccessionedSequence:R-TPR-9645941] Tp57577_TGAC_v2_gene30550 [nucleoplasm] - Trifolium pratense
[EntityWithAccessionedSequence:R-TAE-9645941] TraesCS4D02G096000 [nucleoplasm] - Triticum aestivum
[EntityWithAccessionedSequence:R-TAE-9645941-2] TraesCS4B02G099800 [nucleoplasm] - Triticum aestivum
[EntityWithAccessionedSequence:R-TAE-9645941-3] TraesCS4A02G221600 [nucleoplasm] - Triticum aestivum
[DefinedSet:R-TAE-9645941-4] Homologues of TOPBP1 [nucleoplasm] - Triticum aestivum
[EntityWithAccessionedSequence:R-TDI-9645941] TRIDC4AG034310 [nucleoplasm] - Triticum dicoccoides
[EntityWithAccessionedSequence:R-TDI-9645941-2] TRIDC4BG015480 [nucleoplasm] - Triticum dicoccoides
[DefinedSet:R-TDI-9645941-3] Homologues of TOPBP1 [nucleoplasm] - Triticum dicoccoides
[EntityWithAccessionedSequence:R-TUR-9645941] TuG1812G0400001024.01 [nucleoplasm] - Triticum urartu
[EntityWithAccessionedSequence:R-VRA-9645941] Vradi06g11390 [nucleoplasm] - Vigna radiata
[EntityWithAccessionedSequence:R-VVN-9645941] Vitvi18g00224 [nucleoplasm] - Vitis vinifera
[EntityWithAccessionedSequence:R-ZMA-9645941] Zm00001d004709 [nucleoplasm] - Zea mays
[EntityWithAccessionedSequence:R-OEU-9645941] OE9A104067 [nucleoplasm] - Olea europaea
[EntityWithAccessionedSequence:R-FCR-9645941] FCD_00010272 [nucleoplasm] - Ficus carica
[EntityWithAccessionedSequence:R-LSA-9645941] gene-LSAT_1X6740 [nucleoplasm] - Lactuca sativa
[EntityWithAccessionedSequence:R-SIN-9645941] SIN_1017602 [nucleoplasm] - Sesamum indicum
[EntityWithAccessionedSequence:R-CST-9645941] Csa07g049950 [nucleoplasm] - Camelina sativa
[EntityWithAccessionedSequence:R-CST-9645941-2] Csa09g084060 [nucleoplasm] - Camelina sativa
[EntityWithAccessionedSequence:R-CST-9645941-3] Csa16g041490 [nucleoplasm] - Camelina sativa
[DefinedSet:R-CST-9645941-4] Homologues of TOPBP1 [nucleoplasm] - Camelina sativa
[EntityWithAccessionedSequence:R-CQI-9645941] AUR62013424 [nucleoplasm] - Chenopodium quinoa
[EntityWithAccessionedSequence:R-CML-9645941] MELO3C010511.2 [nucleoplasm] - Cucumis melo
[EntityWithAccessionedSequence:R-NCO-9645941] NC1G0288230 [nucleoplasm] - Nymphaea colorata
[EntityWithAccessionedSequence:R-PSO-9645941] C5167_013285 [nucleoplasm] - Papaver somniferum
[EntityWithAccessionedSequence:R-RCH-9645941] RchiOBHm_Chr6g0296681 [nucleoplasm] - Rosa chinensis
[EntityWithAccessionedSequence:R-SVI-9645941] SEVIR_8G065000v2 [nucleoplasm] - Setaria viridis
[EntityWithAccessionedSequence:R-BJU-9645941] BjuB03g12300S [nucleoplasm] - Brassica juncea
[EntityWithAccessionedSequence:R-CCI-9645941] gene-BT93_I1657 [nucleoplasm] - Corymbia citriodora
[EntityWithAccessionedSequence:R-CCI-9645941-2] gene-BT93_F3144 [nucleoplasm] - Corymbia citriodora
[DefinedSet:R-CCI-9645941-3] Homologues of TOPBP1 [nucleoplasm] - Corymbia citriodora
[EntityWithAccessionedSequence:R-DEX-9645941] Dexi8A01G0005870 [nucleoplasm] - Digitaria exilis
[EntityWithAccessionedSequence:R-DEX-9645941-2] Dexi8B01G0005030 [nucleoplasm] - Digitaria exilis
[DefinedSet:R-DEX-9645941-3] Homologues of TOPBP1 [nucleoplasm] - Digitaria exilis
[EntityWithAccessionedSequence:R-ECG-9645941] scaffold491.21 [nucleoplasm] - Echinochloa crus-galli
[EntityWithAccessionedSequence:R-ECG-9645941-2] scaffold195.46 [nucleoplasm] - Echinochloa crus-galli
[EntityWithAccessionedSequence:R-ECG-9645941-3] scaffold180.71 [nucleoplasm] - Echinochloa crus-galli
[EntityWithAccessionedSequence:R-ECG-9645941-4] scaffold491.20 [nucleoplasm] - Echinochloa crus-galli
[DefinedSet:R-ECG-9645941-5] Homologues of TOPBP1 [nucleoplasm] - Echinochloa crus-galli
[EntityWithAccessionedSequence:R-PSA-9645941] Psat6g040520 [nucleoplasm] - Pisum sativum
[EntityWithAccessionedSequence:R-QLO-9645941] QL09p032547 [nucleoplasm] - Quercus lobata
[EntityWithAccessionedSequence:R-QSU-9645941] gene-CFP56_13848 [nucleoplasm] - Quercus suber
[EntityWithAccessionedSequence:R-VUN-9645941] Vigun08g073600.v1.2 [nucleoplasm] - Vigna unguiculata
[EntityWithAccessionedSequence:R-AUM-9645941] AeUmb.TA1851.r1.6UG0007300 [nucleoplasm] - Aegilops umbellulata
[EntityWithAccessionedSequence:R-AHY-9645941] arahy.Tifrunner.gnm2.ann2.Ah04g022900 [nucleoplasm] - Arachis hypogaea
[EntityWithAccessionedSequence:R-AHY-9645941-2] arahy.Tifrunner.gnm2.ann2.Ah14g037400 [nucleoplasm] - Arachis hypogaea
[DefinedSet:R-AHY-9645941-3] Homologues of TOPBP1 [nucleoplasm] - Arachis hypogaea
[EntityWithAccessionedSequence:R-ASA-9645941] AVESA.00001b.r3.4Ag0000735 [nucleoplasm] - Avena sativa
[EntityWithAccessionedSequence:R-ASA-9645941-2] AVESA.00001b.r3.7Cg0001615 [nucleoplasm] - Avena sativa
[EntityWithAccessionedSequence:R-ASA-9645941-3] AVESA.00001b.r3.4Dg0001069 [nucleoplasm] - Avena sativa
[DefinedSet:R-ASA-9645941-4] Homologues of TOPBP1 [nucleoplasm] - Avena sativa
[EntityWithAccessionedSequence:R-CCA-9645941] C.cajan_33522 [nucleoplasm] - Cajanus cajan
[EntityWithAccessionedSequence:R-FEX-9645941] FRAEX38873_v2_000245900 [nucleoplasm] - Fraxinus excelsior (European ash)
[EntityWithAccessionedSequence:R-GSO-9645941] LOC114389439 [nucleoplasm] - Glycine soja
[EntityWithAccessionedSequence:R-LST-9645941] gene-LATHSAT_LOCUS23067 [nucleoplasm] - Lathyrus sativus
[EntityWithAccessionedSequence:R-TSP-9645941] TraesTSP4B01G105200 [nucleoplasm] - Triticum spelta subsp. spelta
[EntityWithAccessionedSequence:R-TSP-9645941-2] TraesTSP4A01G230700 [nucleoplasm] - Triticum spelta subsp. spelta
[EntityWithAccessionedSequence:R-TSP-9645941-3] TraesTSP4D01G101400 [nucleoplasm] - Triticum spelta subsp. spelta
[DefinedSet:R-TSP-9645941-4] Homologues of TOPBP1 [nucleoplasm] - Triticum spelta subsp. spelta
[EntityWithAccessionedSequence:R-TTI-9645941] Tritim_EIv0.3_0842420 [nucleoplasm] - Triticum timopheevii subsp. timopheevii
[EntityWithAccessionedSequence:R-TTI-9645941-2] Tritim_EIv0.3_0704200 [nucleoplasm] - Triticum timopheevii subsp. timopheevii
[DefinedSet:R-TTI-9645941-3] Homologues of TOPBP1 [nucleoplasm] - Triticum timopheevii subsp. timopheevii
[EntityWithAccessionedSequence:R-VFA-9645941] Vfaba.Hedin2.R1.3g189760 [nucleoplasm] - Vicia faba var. faba
literatureReference
[LiteratureReference:1600739] Genome-wide Analysis of the Core DNA Replication Machinery in the Higher Plants Arabidopsis and Oryza sativa
memberOf
[DefinedSet:R-OSA-9645875] TOPBP1 [nucleoplasm] - Oryza sativa
modified
[InstanceEdit:9646192] Gupta, Parul, 2019-05-17
name
TOPBP1
BRCT domains containing protein
referenceEntity
[ReferenceGeneProduct:9645932] UniProt:B7EHL9 Os11g0191300
referenceType
ReferenceGeneProduct
schemaClass
EntityWithAccessionedSequence
species
[Species:186860] Oryza sativa
stId
R-OSA-9645941
startCoordinate
1
Referrals
(hasMember)
[DefinedSet:R-OSA-9645875] TOPBP1 [nucleoplasm] - Oryza sativa
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Gramene - Plant Reactome