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Reproductive meristem phase change

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authored	[InstanceEdit:8986734] Gupta, Parul, 2017-04-28
compartment	[Compartment:7660] nucleoplasm
created	[InstanceEdit:9608745] Gupta, Parul, 2018-05-17
dbId	9608575
displayName	Reproductive meristem phase change
eventOf	[Pathway:R-OSA-9031669] Reproductive structure development - Oryza sativa
goBiologicalProcess	[GO_BiologicalProcess:160599] vegetative to reproductive phase transition of meristem
hasDiagram	true
hasEvent	[BlackBoxEvent:R-OSA-9608638] GRF10:GIF1 complex formation - Oryza sativa [BlackBoxEvent:R-OSA-9608623] GRF6:GIF1 complex formation - Oryza sativa [Pathway:R-OSA-9608699] Flowering - Oryza sativa [BlackBoxEvent:R-OSA-9608711] Localization of GAMYB - Oryza sativa [BlackBoxEvent:R-OSA-9608642] Localization of GAMYBL1 - Oryza sativa [BlackBoxEvent:R-OSA-9608615] Translation of GAMYB - Oryza sativa [BlackBoxEvent:R-OSA-9608671] Translation of GAMYBL1 - Oryza sativa [BlackBoxEvent:R-OSA-9608611] Localization of GRF10 - Oryza sativa [BlackBoxEvent:R-OSA-9035832] Localization of GRF6 - Oryza sativa [BlackBoxEvent:R-OSA-9608612] Translation of GRF10 - Oryza sativa [BlackBoxEvent:R-OSA-9035754] Translation of GRF6 - Oryza sativa [BlackBoxEvent:R-OSA-9608632] Transcription of CR4 - Oryza sativa [BlackBoxEvent:R-OSA-9608732] Transcription of JMJ706 - Oryza sativa [BlackBoxEvent:R-OSA-9608720] Translation of SPL17 - Oryza sativa [BlackBoxEvent:R-OSA-9608607] Localization of SPL17 - Oryza sativa [BlackBoxEvent:R-OSA-9608587] Localization of IDS1 - Oryza sativa [BlackBoxEvent:R-OSA-9608618] Localization of SNB - Oryza sativa [BlackBoxEvent:R-OSA-9608677] Translation of IDS1 - Oryza sativa [BlackBoxEvent:R-OSA-9608668] Translation of SNB - Oryza sativa [BlackBoxEvent:R-OSA-9608654] Transcription of Ehd1 - Oryza sativa [BlackBoxEvent:R-OSA-9608585] IDS1:ASP1 complex formation - Oryza sativa [BlackBoxEvent:R-OSA-9608644] SNB:ASP1 complex formation - Oryza sativa [BlackBoxEvent:R-OSA-9035602] Transcription of MADS34 - Oryza sativa [BlackBoxEvent:R-OSA-9608740] Transcription of RCN1 - Oryza sativa [BlackBoxEvent:R-OSA-9608757] Transcription of LAX1 - Oryza sativa [BlackBoxEvent:R-OSA-9608628] Transcription of RFL - Oryza sativa [Pathway:R-OSA-9608685] Branch meristem development - Oryza sativa [Pathway:R-OSA-9608726] Inflorescence meristem development - Oryza sativa [Pathway:R-OSA-9608637] Flower meristem development - Oryza sativa [Pathway:R-OSA-9608751] Spikelet meristem development - Oryza sativa [BlackBoxEvent:R-OSA-9035591] Localization of SPL14 - Oryza sativa [BlackBoxEvent:R-OSA-9035819] Translation of SPL14 - Oryza sativa [BlackBoxEvent:R-OSA-9658953] Translation of LAX1 - Oryza sativa [BlackBoxEvent:R-OSA-9658970] Translation of RCN1 - Oryza sativa [Reaction:R-OSA-9658964] Conversion of inactive cytokinin to active cytokinin - Oryza sativa [BlackBoxEvent:R-OSA-9658974] Translation of AFB2 - Oryza sativa [BlackBoxEvent:R-OSA-9658955] Translation of TIR1 - Oryza sativa [BlackBoxEvent:R-OSA-9658959] Localization of AFB2 - Oryza sativa [BlackBoxEvent:R-OSA-9658961] Localization of TIR1 - Oryza sativa [BlackBoxEvent:R-OSA-9658973] Expression of TB1 - Oryza sativa [BlackBoxEvent:R-OSA-9659480] Negative regulation of AUX1 by TIR1 and AFB2 - Oryza sativa
isInDisease	false
isInferred	false
literatureReference	[LiteratureReference:9608652] Coordinated regulation of vegetative and reproductive branching in rice [LiteratureReference:9608744] Aberrant spikelet and panicle1, encoding a TOPLESS-related transcriptional co-repressor, is involved in the regulation of meristem fate in rice [LiteratureReference:9608598] Crinkly4 receptor-like kinase is required to maintain the interlocking of the palea and lemma, and fertility in rice, by promoting epidermal cell differentiation [LiteratureReference:1154554] Direct control of shoot meristem activity by a cytokinin-activating enzyme [LiteratureReference:9608721] Distinct regulatory role for RFL, the rice LFY homolog, in determining flowering time and plant architecture [LiteratureReference:9029298] GAMYB controls different sets of genes and is differentially regulated by microRNA in aleurone cells and anthers [LiteratureReference:8934086] Genetic interactions between diverged alleles of Early heading date 1 (Ehd1) and Heading date 3a (Hd3a)/ RICE FLOWERING LOCUS T1 (RFT1) control differential heading and contribute to regional adaptation in rice (Oryza sativa) [LiteratureReference:9030877] Genome-wide binding analysis of the transcription activator ideal plant architecture1 reveals a complex network regulating rice plant architecture [LiteratureReference:8986736] Gibberellin modulates anther development in rice via the transcriptional regulation of GAMYB [LiteratureReference:8933993] Homodimerization of Ehd1 is required to induce flowering in rice [LiteratureReference:8986858] Identification of gamyb-4 and analysis of the regulatory role of GAMYB in rice anther development [LiteratureReference:9608639] LAX and SPA: major regulators of shoot branching in rice [LiteratureReference:8986784] Loss-of-function mutations of the rice GAMYB gene impair alpha-amylase expression in aleurone and flower development [LiteratureReference:9608709] MiR529a modulates panicle architecture through regulating SQUAMOSA PROMOTER BINDING-LIKE genes in rice (Oryza sativa) [LiteratureReference:9035580] MicroRNAs in crop improvement: fine-tuners for complex traits [LiteratureReference:5608202] OsTIR1 and OsAFB2 downregulation via OsmiR393 overexpression leads to more tillers, early flowering and less tolerance to salt and drought in rice [LiteratureReference:9608590] OsmiR396d-regulated OsGRFs function in floral organogenesis in rice through binding to their targets OsJMJ706 and OsCR4 [LiteratureReference:9608624] Over-expression of miR172 causes loss of spikelet determinacy and floral organ abnormalities in rice (Oryza sativa) [LiteratureReference:9608724] Overexpression of RCN1 and RCN2, rice TERMINAL FLOWER 1/CENTRORADIALIS homologs, confers delay of phase transition and altered panicle morphology in rice [LiteratureReference:9608703] Rice jmjC domain-containing gene JMJ706 encodes H3K9 demethylase required for floral organ development [LiteratureReference:9608716] Rice miR172 induces flowering by suppressing OsIDS1 and SNB, two AP2 genes that negatively regulate expression of Ehd1 and florigens [LiteratureReference:9608596] The rice heterochronic gene SUPERNUMERARY BRACT regulates the transition from spikelet meristem to floral meristem [LiteratureReference:9608602] Two AP2 family genes, supernumerary bract (SNB) and Osindeterminate spikelet 1 (OsIDS1), synergistically control inflorescence architecture and floral meristem establishment in rice [LiteratureReference:9608742] Two-Step Regulation of LAX PANICLE1 Protein Accumulation in Axillary Meristem Formation in Rice [LiteratureReference:9608641] Control of grass inflorescence form by the fine-tuning of meristem phase change
modified	[InstanceEdit:11540225] Elser, Justin, 2025-03-27
name	Reproductive meristem phase change
orthologousEvent	[Pathway:R-CSC-9608575] Reproductive meristem phase change - Cannabis sativa [Pathway:R-SCR-9608575] Reproductive meristem phase change - Secale cereale [Pathway:R-OEU-9608575] Reproductive meristem phase change - Olea europaea [Pathway:R-TAE-9608575] Reproductive meristem phase change - Triticum aestivum [Pathway:R-OKA-9608575] Reproductive meristem phase change - Oryza sativa aus subgroup [Pathway:R-SBI-9608575] Reproductive meristem phase change - Sorghum bicolor [Pathway:R-PSO-9608575] Reproductive meristem phase change - Papaver somniferum [Pathway:R-SLY-9608575] Reproductive meristem phase change - Solanum lycopersicum [Pathway:R-CLA-9608575] Reproductive meristem phase change - Citrullus lanatus [Pathway:R-LSA-9608575] Reproductive meristem phase change - Lactuca sativa [Pathway:R-MAC-9608575] Reproductive meristem phase change - Musa acuminata [Pathway:R-OES-9608575] Reproductive meristem phase change - Olea europaea var. sylvestris [Pathway:R-CCA-9608575] Reproductive meristem phase change - Cajanus cajan [Pathway:R-VRA-9608575] Reproductive meristem phase change - Vigna radiata [Pathway:R-TUR-9608575] Reproductive meristem phase change - Triticum urartu [Pathway:R-CBA-9608575] Reproductive meristem phase change - Chara braunii [Pathway:R-NNU-9608575] Reproductive meristem phase change - Nelumbo nucifera [Pathway:R-MPO-9608575] Reproductive meristem phase change - Marchantia polymorpha [Pathway:R-CQI-9608575] Reproductive meristem phase change - Chenopodium quinoa [Pathway:R-BRA-9608575] Reproductive meristem phase change - Brassica rapa [Pathway:R-STU-9608575] Reproductive meristem phase change - Solanum tuberosum [Pathway:R-CST-9608575] Reproductive meristem phase change - Camelina sativa [Pathway:R-ONI-9608575] Reproductive meristem phase change - Oryza nivara [Pathway:R-SIT-9608575] Reproductive meristem phase change - Setaria italica [Pathway:R-ATR-9608575] Reproductive meristem phase change - Amborella trichopoda [Pathway:R-GMA-9608575] Reproductive meristem phase change - Glycine max [Pathway:R-MDO-9608575] Reproductive meristem phase change - Malus domestica [Pathway:R-AOF-9608575] Reproductive meristem phase change - Asparagus officinalis [Pathway:R-TTI-9608575] Reproductive meristem phase change - Triticum timopheevii subsp. timopheevii [Pathway:R-VVN-9608575] Reproductive meristem phase change - Vitis vinifera [Pathway:R-AHA-9608575] Reproductive meristem phase change - Arabidopsis halleri [Pathway:R-PSA-9608575] Reproductive meristem phase change - Pisum sativum [Pathway:R-CML-9608575] Reproductive meristem phase change - Cucumis melo [Pathway:R-PDA-9608575] Reproductive meristem phase change - Phoenix dactylifera [Pathway:R-BDI-9608575] Reproductive meristem phase change - Brachypodium distachyon [Pathway:R-CSI-9608575] Reproductive meristem phase change - Citrus sinensis [Pathway:R-TPR-9608575] Reproductive meristem phase change - Trifolium pratense [Pathway:R-ECU-9608575] Reproductive meristem phase change - Eragrostis curvula [Pathway:R-NCO-9608575] Reproductive meristem phase change - Nymphaea colorata [Pathway:R-LPE-9608575] Reproductive meristem phase change - Leersia perrieri [Pathway:R-PED-9608575] Reproductive meristem phase change - Phyllostachys edulis [Pathway:R-TDI-9608575] Reproductive meristem phase change - Triticum dicoccoides [Pathway:R-CAR-9608575] Reproductive meristem phase change - Cicer arietinum [Pathway:R-ACO-9608575] Reproductive meristem phase change - Ananas comosus [Pathway:R-OBR-9608575] Reproductive meristem phase change - Oryza brachyantha [Pathway:R-TTU-9608575] Reproductive meristem phase change - Triticum turgidum [Pathway:R-PAB-9608575] Reproductive meristem phase change - Picea abies [Pathway:R-BVU-9608575] Reproductive meristem phase change - Beta vulgaris [Pathway:R-QSU-9608575] Reproductive meristem phase change - Quercus suber [Pathway:R-MGU-9608575] Reproductive meristem phase change - Erythranthe guttata [Pathway:R-ZJA-9608575] Reproductive meristem phase change - Zoysia japonica [Pathway:R-ACH-9608575] Reproductive meristem phase change - Actinidia chinensis [Pathway:R-GSO-9608575] Reproductive meristem phase change - Glycine soja [Pathway:R-ORU-9608575] Reproductive meristem phase change - Oryza rufipogon [Pathway:R-JRE-9608575] Reproductive meristem phase change - Juglans regia [Pathway:R-CSA-9608575] Reproductive meristem phase change - Cucumis sativus [Pathway:R-PPA-9608575] Reproductive meristem phase change - Physcomitrella patens [Pathway:R-AHY-9608575] Reproductive meristem phase change - Arachis hypogaea [Pathway:R-DCA-9608575] Reproductive meristem phase change - Daucus carota [Pathway:R-ATH-9608575] Reproductive meristem phase change - Arabidopsis thaliana [Pathway:R-QLO-9608575] Reproductive meristem phase change - Quercus lobata [Pathway:R-SVI-9608575] Reproductive meristem phase change - Setaria viridis [Pathway:R-LST-9608575] Reproductive meristem phase change - Lathyrus sativus [Pathway:R-OOF-9608575] Reproductive meristem phase change - Oryza officinalis [Pathway:R-OGU-9608575] Reproductive meristem phase change - Oryza glumaepatula [Pathway:R-TCA-9608575] Reproductive meristem phase change - Theobroma cacao [Pathway:R-PPE-9608575] Reproductive meristem phase change - Prunus persica [Pathway:R-SHI-9608575] Reproductive meristem phase change - Salvia hispanica [Pathway:R-LAN-9608575] Reproductive meristem phase change - Lupinus angustifolius [Pathway:R-DRO-9608575] Reproductive meristem phase change - Dioscorea rotundata [Pathway:R-OME-9608575] Reproductive meristem phase change - Oryza meridionalis [Pathway:R-ZMA-9608575] Reproductive meristem phase change - Zea mays [Pathway:R-CSK-9608575] Reproductive meristem phase change - Cannabis sativa subsp. indica [Pathway:R-JCU-9608575] Reproductive meristem phase change - Jatropha curcas [Pathway:R-OBA-9608575] Reproductive meristem phase change - Oryza barthii [Pathway:R-HVU-9608575] Reproductive meristem phase change - Hordeum vulgare [Pathway:R-CCD-9608575] Reproductive meristem phase change - Cynara cardunculus var. scolymus [Pathway:R-SSP-9608575] Reproductive meristem phase change - Saccharum spontaneum [Pathway:R-PVU-9608575] Reproductive meristem phase change - Phaseolus vulgaris [Pathway:R-OSI-9608575] Reproductive meristem phase change - Oryza sativa Indica Group [Pathway:R-HLH-9608575] Reproductive meristem phase change - Humulus lupulus [Pathway:R-AUM-9608575] Reproductive meristem phase change - Aegilops umbellulata [Pathway:R-OPU-9608575] Reproductive meristem phase change - Oryza punctata [Pathway:R-OLO-9608575] Reproductive meristem phase change - Oryza longistaminata [Pathway:R-DEX-9608575] Reproductive meristem phase change - Digitaria exilis [Pathway:R-CCL-9608575] Reproductive meristem phase change - Citrus clementina [Pathway:R-PAV-9608575] Reproductive meristem phase change - Prunus avium [Pathway:R-ZMY-9608575] Reproductive meristem phase change - Zea mays ver5 [Pathway:R-MTR-9608575] Reproductive meristem phase change - Medicago truncatula [Pathway:R-BNA-9608575] Reproductive meristem phase change - Brassica napus [Pathway:R-LPR-9608575] Reproductive meristem phase change - Lolium perenne [Pathway:R-CRU-9608575] Reproductive meristem phase change - Capsella rubella [Pathway:R-BJU-9608575] Reproductive meristem phase change - Brassica juncea [Pathway:R-ETE-9608575] Reproductive meristem phase change - Eragrostis tef [Pathway:R-COL-9608575] Reproductive meristem phase change - Corchorus olitorius [Pathway:R-TSP-9608575] Reproductive meristem phase change - Triticum spelta subsp. spelta [Pathway:R-FVE-9608575] Reproductive meristem phase change - Fragaria vesca [Pathway:R-PVE-9608575] Reproductive meristem phase change - Pistacia vera [Pathway:R-VAN-9608575] Reproductive meristem phase change - Vigna angularis [Pathway:R-CCP-9608575] Reproductive meristem phase change - Corchorus capsularis [Pathway:R-PTA-9608575] Reproductive meristem phase change - Pinus taeda [Pathway:R-VUN-9608575] Reproductive meristem phase change - Vigna unguiculata [Pathway:R-ASA-9608575] Reproductive meristem phase change - Avena sativa [Pathway:R-ITR-9608575] Reproductive meristem phase change - Ipomoea triloba [Pathway:R-AIP-9608575] Reproductive meristem phase change - Arachis ipaensis [Pathway:R-HLP-9608575] Reproductive meristem phase change - Humulus lupulus var. lupulus [Pathway:R-MES-9608575] Reproductive meristem phase change - Manihot esculenta [Pathway:R-OAU-9608575] Reproductive meristem phase change - Oryza australiensis [Pathway:R-ALY-9608575] Reproductive meristem phase change - Arabidopsis lyrata [Pathway:R-OGR-9608575] Reproductive meristem phase change - Oryza meyeriana var. granulata [Pathway:R-HAN-9608575] Reproductive meristem phase change - Helianthus annuus [Pathway:R-CCN-9608575] Reproductive meristem phase change - Coffea canephora [Pathway:R-OMI-9608575] Reproductive meristem phase change - Oryza minuta [Pathway:R-PHH-9608575] Reproductive meristem phase change - Panicum hallii var. hallii ("HAL2") [Pathway:R-SIN-9608575] Reproductive meristem phase change - Sesamum indicum [Pathway:R-EGR-9608575] Reproductive meristem phase change - Eucalyptus grandis [Pathway:R-RCH-9608575] Reproductive meristem phase change - Rosa chinensis [Pathway:R-ADU-9608575] Reproductive meristem phase change - Arachis duranensis [Pathway:R-GRA-9608575] Reproductive meristem phase change - Gossypium raimondii [Pathway:R-ATA-9608575] Reproductive meristem phase change - Aegilops tauschii [Pathway:R-FEX-9608575] Reproductive meristem phase change - Fraxinus excelsior (European ash) [Pathway:R-PHA-9608575] Reproductive meristem phase change - Panicum hallii ("FIL2") [Pathway:R-OLU-9608575] Reproductive meristem phase change - Ostreococcus lucimarinus [Pathway:R-FCR-9608575] Reproductive meristem phase change - Ficus carica [Pathway:R-CCI-9608575] Reproductive meristem phase change - Corymbia citriodora [Pathway:R-NAT-9608575] Reproductive meristem phase change - Nicotiana attenuata [Pathway:R-PTI-9608575] Reproductive meristem phase change - Populus trichocarpa [Pathway:R-ECG-9608575] Reproductive meristem phase change - Echinochloa crus-galli [Pathway:R-VFA-9608575] Reproductive meristem phase change - Vicia faba var. faba [Pathway:R-BOL-9608575] Reproductive meristem phase change - Brassica oleracea [Pathway:R-SMO-9608575] Reproductive meristem phase change - Selaginella moellendorffii [Pathway:R-OGL-9608575] Reproductive meristem phase change - Oryza glaberrima [Pathway:R-CAN-9608575] Reproductive meristem phase change - Capsicum annuum
revised	[InstanceEdit:9658831] Gupta, Parul, 2019-08-20
schemaClass	Pathway
species	[Species:186860] Oryza sativa
stId	R-OSA-9608575
summation	[Summation:9608580] After transition to the reproductive phase, normal shoot api...

Referrals

(hasEvent)

[Pathway:R-OSA-9031669] Reproductive structure development - Oryza sativa