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Lateral root initiation

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created	[InstanceEdit:9030610] Gupta, Parul, 2017-11-28
dbId	9030557
displayName	Lateral root initiation
eventOf	[Pathway:R-OSA-9030693] Lateral root development - Oryza sativa
followingEvent	[Pathway:R-OSA-9675304] Lateral root emergence - Oryza sativa
goBiologicalProcess	[GO_BiologicalProcess:161317] lateral root development
hasDiagram	true
hasEvent	[Reaction:R-OSA-9675358] Interaction of cis-trans OsIAA11 conformer with the TIR1 - Oryza sativa [Reaction:R-OSA-9675463] Ubiquitination and degradation of cis-trans OsIAA11 conformer - Oryza sativa [Reaction:R-OSA-9675265] peptidyl-prolyl cis/trans isomerization of OsIAA11 - Oryza sativa [Reaction:R-OSA-9675299] Interaction of CYP2 with ZFP - Oryza sativa [Reaction:R-OSA-9675489] Interaction of CYP2 with IAA11 - Oryza sativa [Reaction:R-OSA-9675525] Interaction of CYP2 with IAA13 - Oryza sativa
isInDisease	false
isInferred	false
literatureReference	[LiteratureReference:9675421] Peptidyl-prolyl isomerization targets rice Aux/IAAs for proteasomal degradation during auxin signalling [LiteratureReference:9675441] A zinc finger protein, interacted with cyclophilin, affects root development via IAA pathway in rice
modified	[InstanceEdit:11540225] Elser, Justin, 2025-03-27
name	Lateral root initiation
orthologousEvent	[Pathway:R-CCP-9030557] Lateral root initiation - Corchorus capsularis [Pathway:R-VUN-9030557] Lateral root initiation - Vigna unguiculata [Pathway:R-OAU-9030557] Lateral root initiation - Oryza australiensis [Pathway:R-VAN-9030557] Lateral root initiation - Vigna angularis [Pathway:R-CAR-9030557] Lateral root initiation - Cicer arietinum [Pathway:R-ALY-9030557] Lateral root initiation - Arabidopsis lyrata [Pathway:R-HLP-9030557] Lateral root initiation - Humulus lupulus var. lupulus [Pathway:R-BDI-9030557] Lateral root initiation - Brachypodium distachyon [Pathway:R-LPR-9030557] Lateral root initiation - Lolium perenne [Pathway:R-PTA-9030557] Lateral root initiation - Pinus taeda [Pathway:R-ECU-9030557] Lateral root initiation - Eragrostis curvula [Pathway:R-MPO-9030557] Lateral root initiation - Marchantia polymorpha [Pathway:R-JRE-9030557] Lateral root initiation - Juglans regia [Pathway:R-HAN-9030557] Lateral root initiation - Helianthus annuus [Pathway:R-CSK-9030557] Lateral root initiation - Cannabis sativa subsp. indica [Pathway:R-PVU-9030557] Lateral root initiation - Phaseolus vulgaris [Pathway:R-PHA-9030557] Lateral root initiation - Panicum hallii ("FIL2") [Pathway:R-MAC-9030557] Lateral root initiation - Musa acuminata [Pathway:R-BRA-9030557] Lateral root initiation - Brassica rapa [Pathway:R-ATA-9030557] Lateral root initiation - Aegilops tauschii [Pathway:R-ZMA-9030557] Lateral root initiation - Zea mays [Pathway:R-AOF-9030557] Lateral root initiation - Asparagus officinalis [Pathway:R-QSU-9030557] Lateral root initiation - Quercus suber [Pathway:R-SIT-9030557] Lateral root initiation - Setaria italica [Pathway:R-VVN-9030557] Lateral root initiation - Vitis vinifera [Pathway:R-BVU-9030557] Lateral root initiation - Beta vulgaris [Pathway:R-LAN-9030557] Lateral root initiation - Lupinus angustifolius [Pathway:R-PVE-9030557] Lateral root initiation - Pistacia vera [Pathway:R-PSO-9030557] Lateral root initiation - Papaver somniferum [Pathway:R-OEU-9030557] Lateral root initiation - Olea europaea [Pathway:R-MTR-9030557] Lateral root initiation - Medicago truncatula [Pathway:R-OMI-9030557] Lateral root initiation - Oryza minuta [Pathway:R-AUM-9030557] Lateral root initiation - Aegilops umbellulata [Pathway:R-AHY-9030557] Lateral root initiation - Arachis hypogaea [Pathway:R-SHI-9030557] Lateral root initiation - Salvia hispanica [Pathway:R-SCR-9030557] Lateral root initiation - Secale cereale [Pathway:R-TSP-9030557] Lateral root initiation - Triticum spelta subsp. spelta [Pathway:R-ETE-9030557] Lateral root initiation - Eragrostis tef [Pathway:R-SVI-9030557] Lateral root initiation - Setaria viridis [Pathway:R-ATH-9030557] Lateral root initiation - Arabidopsis thaliana [Pathway:R-ONI-9030557] Lateral root initiation - Oryza nivara [Pathway:R-BNA-9030557] Lateral root initiation - Brassica napus [Pathway:R-OSI-9030557] Lateral root initiation - Oryza sativa Indica Group [Pathway:R-OBA-9030557] Lateral root initiation - Oryza barthii [Pathway:R-ZJA-9030557] Lateral root initiation - Zoysia japonica [Pathway:R-CQI-9030557] Lateral root initiation - Chenopodium quinoa [Pathway:R-OME-9030557] Lateral root initiation - Oryza meridionalis [Pathway:R-VRA-9030557] Lateral root initiation - Vigna radiata [Pathway:R-GRA-9030557] Lateral root initiation - Gossypium raimondii [Pathway:R-PAB-9030557] Lateral root initiation - Picea abies [Pathway:R-CAN-9030557] Lateral root initiation - Capsicum annuum [Pathway:R-TCA-9030557] Lateral root initiation - Theobroma cacao [Pathway:R-PPA-9030557] Lateral root initiation - Physcomitrella patens [Pathway:R-LPE-9030557] Lateral root initiation - Leersia perrieri [Pathway:R-PPE-9030557] Lateral root initiation - Prunus persica [Pathway:R-OGU-9030557] Lateral root initiation - Oryza glumaepatula [Pathway:R-NAT-9030557] Lateral root initiation - Nicotiana attenuata [Pathway:R-MES-9030557] Lateral root initiation - Manihot esculenta [Pathway:R-AHA-9030557] Lateral root initiation - Arabidopsis halleri [Pathway:R-ITR-9030557] Lateral root initiation - Ipomoea triloba [Pathway:R-AIP-9030557] Lateral root initiation - Arachis ipaensis [Pathway:R-ASA-9030557] Lateral root initiation - Avena sativa [Pathway:R-RCH-9030557] Lateral root initiation - Rosa chinensis [Pathway:R-TDI-9030557] Lateral root initiation - Triticum dicoccoides [Pathway:R-EGR-9030557] Lateral root initiation - Eucalyptus grandis [Pathway:R-TTI-9030557] Lateral root initiation - Triticum timopheevii subsp. timopheevii [Pathway:R-CCL-9030557] Lateral root initiation - Citrus clementina [Pathway:R-NNU-9030557] Lateral root initiation - Nelumbo nucifera [Pathway:R-PDA-9030557] Lateral root initiation - Phoenix dactylifera [Pathway:R-STU-9030557] Lateral root initiation - Solanum tuberosum [Pathway:R-TPR-9030557] Lateral root initiation - Trifolium pratense [Pathway:R-CML-9030557] Lateral root initiation - Cucumis melo [Pathway:R-ZMY-9030557] Lateral root initiation - Zea mays ver5 [Pathway:R-VFA-9030557] Lateral root initiation - Vicia faba var. faba [Pathway:R-PTI-9030557] Lateral root initiation - Populus trichocarpa [Pathway:R-CSI-9030557] Lateral root initiation - Citrus sinensis [Pathway:R-OES-9030557] Lateral root initiation - Olea europaea var. sylvestris [Pathway:R-FEX-9030557] Lateral root initiation - Fraxinus excelsior (European ash) [Pathway:R-CCI-9030557] Lateral root initiation - Corymbia citriodora [Pathway:R-CCD-9030557] Lateral root initiation - Cynara cardunculus var. scolymus [Pathway:R-JCU-9030557] Lateral root initiation - Jatropha curcas [Pathway:R-OPU-9030557] Lateral root initiation - Oryza punctata [Pathway:R-BJU-9030557] Lateral root initiation - Brassica juncea [Pathway:R-HVU-9030557] Lateral root initiation - Hordeum vulgare [Pathway:R-ACO-9030557] Lateral root initiation - Ananas comosus [Pathway:R-PED-9030557] Lateral root initiation - Phyllostachys edulis [Pathway:R-GMA-9030557] Lateral root initiation - Glycine max [Pathway:R-FCR-9030557] Lateral root initiation - Ficus carica [Pathway:R-PAV-9030557] Lateral root initiation - Prunus avium [Pathway:R-OGR-9030557] Lateral root initiation - Oryza meyeriana var. granulata [Pathway:R-CRU-9030557] Lateral root initiation - Capsella rubella [Pathway:R-CST-9030557] Lateral root initiation - Camelina sativa [Pathway:R-PSA-9030557] Lateral root initiation - Pisum sativum [Pathway:R-TUR-9030557] Lateral root initiation - Triticum urartu [Pathway:R-DCA-9030557] Lateral root initiation - Daucus carota [Pathway:R-DRO-9030557] Lateral root initiation - Dioscorea rotundata [Pathway:R-CLA-9030557] Lateral root initiation - Citrullus lanatus [Pathway:R-CSC-9030557] Lateral root initiation - Cannabis sativa [Pathway:R-COL-9030557] Lateral root initiation - Corchorus olitorius [Pathway:R-OOF-9030557] Lateral root initiation - Oryza officinalis [Pathway:R-OGL-9030557] Lateral root initiation - Oryza glaberrima [Pathway:R-ECG-9030557] Lateral root initiation - Echinochloa crus-galli [Pathway:R-DEX-9030557] Lateral root initiation - Digitaria exilis [Pathway:R-BOL-9030557] Lateral root initiation - Brassica oleracea [Pathway:R-FVE-9030557] Lateral root initiation - Fragaria vesca [Pathway:R-OLO-9030557] Lateral root initiation - Oryza longistaminata [Pathway:R-CSA-9030557] Lateral root initiation - Cucumis sativus [Pathway:R-MDO-9030557] Lateral root initiation - Malus domestica [Pathway:R-ACH-9030557] Lateral root initiation - Actinidia chinensis [Pathway:R-LST-9030557] Lateral root initiation - Lathyrus sativus [Pathway:R-ORU-9030557] Lateral root initiation - Oryza rufipogon [Pathway:R-MGU-9030557] Lateral root initiation - Erythranthe guttata [Pathway:R-QLO-9030557] Lateral root initiation - Quercus lobata [Pathway:R-SSP-9030557] Lateral root initiation - Saccharum spontaneum [Pathway:R-TTU-9030557] Lateral root initiation - Triticum turgidum [Pathway:R-CCA-9030557] Lateral root initiation - Cajanus cajan [Pathway:R-SBI-9030557] Lateral root initiation - Sorghum bicolor [Pathway:R-HLH-9030557] Lateral root initiation - Humulus lupulus [Pathway:R-LSA-9030557] Lateral root initiation - Lactuca sativa [Pathway:R-SLY-9030557] Lateral root initiation - Solanum lycopersicum [Pathway:R-OBR-9030557] Lateral root initiation - Oryza brachyantha [Pathway:R-ADU-9030557] Lateral root initiation - Arachis duranensis [Pathway:R-PHH-9030557] Lateral root initiation - Panicum hallii var. hallii ("HAL2") [Pathway:R-SMO-9030557] Lateral root initiation - Selaginella moellendorffii [Pathway:R-TAE-9030557] Lateral root initiation - Triticum aestivum [Pathway:R-SIN-9030557] Lateral root initiation - Sesamum indicum [Pathway:R-GSO-9030557] Lateral root initiation - Glycine soja [Pathway:R-CCN-9030557] Lateral root initiation - Coffea canephora
revised	[InstanceEdit:9659485] Gupta, Parul, 2019-08-27
schemaClass	Pathway
species	[Species:186860] Oryza sativa
stId	R-OSA-9030557

Referrals

(hasEvent)	[Pathway:R-OSA-9030693] Lateral root development - Oryza sativa
(precedingEvent)	[Pathway:R-OSA-9675304] Lateral root emergence - Oryza sativa

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