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Short day regulated expression of florigens

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authored	[InstanceEdit:8854459] Gupta, Parul, 2016-01-27
compartment	[Compartment:7660] nucleoplasm
created	[InstanceEdit:8934132] Jaiswal, Pankaj, 2016-08-08
dbId	8934108
displayName	Short day regulated expression of florigens
eventOf	[Pathway:R-OSA-8934088] Inflorescence development - Oryza sativa
goBiologicalProcess	[GO_BiologicalProcess:160894] inflorescence development
hasDiagram	true
hasEvent	[BlackBoxEvent:R-OSA-8934277] Expression of Hd3a under short day photoperiod - Oryza sativa [BlackBoxEvent:R-OSA-8934243] Expression of RFT1 under short day photoperiod - Oryza sativa [BlackBoxEvent:R-OSA-8933998] Expression of Ehd1 under short day photoperiod - Oryza sativa [BlackBoxEvent:R-OSA-8934215] Expression of Hd1 under short day photoperiod - Oryza sativa [BlackBoxEvent:R-OSA-8934125] Expression of MADS51 under short day photoperiod - Oryza sativa [BlackBoxEvent:R-OSA-8934273] Expression of Ghd8 under short day photoperiod - Oryza sativa [BlackBoxEvent:R-OSA-8934180] Expression of COL13 - Oryza sativa [BlackBoxEvent:R-OSA-8934134] Expression of COL4 - Oryza sativa [Reaction:R-OSA-9920313] Binding of HAF1 to Hd1 - Oryza sativa [BlackBoxEvent:R-OSA-9920348] Expression of LF - Oryza sativa [Reaction:R-OSA-9920368] Formation of LC2:VIL2 complex - Oryza sativa [Reaction:R-OSA-9920335] Homodimerization of HAF1 - Oryza sativa [Reaction:R-OSA-9920280] Homodimerization of phosphorylated Ehd1 - Oryza sativa [BlackBoxEvent:R-OSA-9920321] Phosphorylation of Ehd1 - Oryza sativa [BlackBoxEvent:R-OSA-9920299] Phosphorylation of RR1 - Oryza sativa [Reaction:R-OSA-9920343] Ubiquitin mediated degradation of Hd1 - Oryza sativa [Reaction:R-OSA-9920264] heterodimerization of phosphorylated Ehd1 and RR1 - Oryza sativa [BlackBoxEvent:R-OSA-9928950] Expression of MADS50 (ABA-independent) - Oryza sativa
isInDisease	false
isInferred	false
literatureReference	[LiteratureReference:8934261] Both Hd1 and Ehd1 are important for artificial selection of flowering time in cultivated rice [LiteratureReference:8934154] A major QTL, Ghd8, plays pleiotropic roles in regulating grain productivity, plant height, and heading date in rice [LiteratureReference:8934016] Combinations of the Ghd7, Ghd8 and Hd1 genes largely define the ecogeographical adaptation and yield potential of cultivated rice [LiteratureReference:8934030] Comparative genomics of flowering time pathways using Brachypodium distachyon as a model for the temperate grasses [LiteratureReference:8934118] DTH8 suppresses flowering in rice, influencing plant height and yield potential simultaneously [LiteratureReference:8934040] Ectopic expression of OsLFL1 in rice represses Ehd1 by binding on its promoter [LiteratureReference:8934226] Ehd2, a rice ortholog of the maize INDETERMINATE1 gene, promotes flowering by up-regulating Ehd1 [LiteratureReference:8934234] Ehd3, encoding a plant homeodomain finger-containing protein, is a critical promoter of rice flowering [LiteratureReference:8934086] Genetic interactions between diverged alleles of Early heading date 1 (Ehd1) and Heading date 3a (Hd3a)/ RICE FLOWERING LOCUS T1 (RFT1) control differential heading and contribute to regional adaptation in rice (Oryza sativa) [LiteratureReference:8934089] Hd6, a rice quantitative trait locus involved in photoperiod sensitivity, encodes the alpha subunit of protein kinase CK2 [LiteratureReference:8933993] Homodimerization of Ehd1 is required to induce flowering in rice [LiteratureReference:8934246] LHD1, an allele of DTH8/Ghd8, controls late heading date in common wild rice (Oryza rufipogon) [LiteratureReference:8934076] OsCO3, a CONSTANS-LIKE gene, controls flowering by negatively regulating the expression of FT-like genes under SD conditions in rice [LiteratureReference:8934218] OsCOL10, a CONSTANS-Like Gene, Functions as a Flowering Time Repressor Downstream of Ghd7 in Rice [LiteratureReference:8934143] OsELF3 is involved in circadian clock regulation for promoting flowering under long-day conditions in rice [LiteratureReference:8934138] OsHAL3, a Blue Light-Responsive Protein, Interacts with the Floral Regulator Hd1 to Activate Flowering in Rice [LiteratureReference:8934240] OsMADS50 and OsMADS56 function antagonistically in regulating long day (LD)-dependent flowering in rice [LiteratureReference:8934266] OsMADS51 is a short-day flowering promoter that functions upstream of Ehd1, OsMADS14, and Hd3a [LiteratureReference:8934271] OsPhyA modulates rice flowering time mainly through OsGI under short days and Ghd7 under long days in the absence of phytochrome B [LiteratureReference:8934182] Overexpression of transcription factor OsLFL1 delays flowering time in Oryza sativa [LiteratureReference:8934262] Phytochrome B regulates Heading date 1 (Hd1)-mediated expression of rice florigen Hd3a and critical day length in rice [LiteratureReference:8934087] Validation and characterization of Ghd7.1, a major quantitative trait locus with pleiotropic effects on spikelets per panicle, plant height, and heading date in rice (Oryza sativa L.) [LiteratureReference:8934272] Casein kinases I and 2? phosphorylate oryza sativa pseudo-response regulator 37 (OsPRR37) in photoperiodic flowering in rice [LiteratureReference:8934163] A CONSTANS-like transcriptional activator, OsCOL13, functions as a negative regulator of flowering downstream of OsphyB and upstream of Ehd1 in rice [LiteratureReference:8934270] OsCOL4 is a constitutive flowering repressor upstream of Ehd1 and downstream of OsphyB [LiteratureReference:9920305] Ef-cd locus shortens rice maturity duration without yield penalty [LiteratureReference:9920328] An atypical HLH protein OsLF in rice regulates flowering time and interacts with OsPIL13 and OsPIL15 [LiteratureReference:9920286] Ehd4 encodes a novel and Oryza-genus-specific regulator of photoperiodic flowering in rice [LiteratureReference:9920359] LC2 and OsVIL2 promote rice flowering by photoperoid-induced epigenetic silencing of OsLF [LiteratureReference:9920363] OsHAL3 mediates a new pathway in the light-regulated growth of rice [LiteratureReference:9920333] OsVIL2 functions with PRC2 to induce flowering by repressing OsLFL1 in rice [LiteratureReference:9920325] The RING-Finger Ubiquitin Ligase HAF1 Mediates Heading date 1 Degradation during Photoperiodic Flowering in Rice [LiteratureReference:9920275] Transcriptional and post-transcriptional regulation of heading date in rice
modified	[InstanceEdit:11540225] Elser, Justin, 2025-03-27
name	Short day regulated expression of florigens
orthologousEvent	[Pathway:R-BOL-8934108] Short day regulated expression of florigens - Brassica oleracea [Pathway:R-ACH-8934108] Short day regulated expression of florigens - Actinidia chinensis [Pathway:R-ECG-8934108] Short day regulated expression of florigens - Echinochloa crus-galli [Pathway:R-SCR-8934108] Short day regulated expression of florigens - Secale cereale [Pathway:R-CLA-8934108] Short day regulated expression of florigens - Citrullus lanatus [Pathway:R-CST-8934108] Short day regulated expression of florigens - Camelina sativa [Pathway:R-SVI-8934108] Short day regulated expression of florigens - Setaria viridis [Pathway:R-FVE-8934108] Short day regulated expression of florigens - Fragaria vesca [Pathway:R-ZJA-8934108] Short day regulated expression of florigens - Zoysia japonica [Pathway:R-OKA-8934108] Short day regulated expression of florigens - Oryza sativa aus subgroup [Pathway:R-TUR-8934108] Short day regulated expression of florigens - Triticum urartu [Pathway:R-OEU-8934108] Short day regulated expression of florigens - Olea europaea [Pathway:R-SLY-8934108] Short day regulated expression of florigens - Solanum lycopersicum [Pathway:R-BVU-8934108] Short day regulated expression of florigens - Beta vulgaris [Pathway:R-ATA-8934108] Short day regulated expression of florigens - Aegilops tauschii [Pathway:R-VUN-8934108] Short day regulated expression of florigens - Vigna unguiculata [Pathway:R-QSU-8934108] Short day regulated expression of florigens - Quercus suber [Pathway:R-AHY-8934108] Short day regulated expression of florigens - Arachis hypogaea [Pathway:R-CSA-8934108] Short day regulated expression of florigens - Cucumis sativus [Pathway:R-CAN-8934108] Short day regulated expression of florigens - Capsicum annuum [Pathway:R-SMO-8934108] Short day regulated expression of florigens - Selaginella moellendorffii [Pathway:R-PHA-8934108] Short day regulated expression of florigens - Panicum hallii ("FIL2") [Pathway:R-NCO-8934108] Short day regulated expression of florigens - Nymphaea colorata [Pathway:R-VFA-8934108] Short day regulated expression of florigens - Vicia faba var. faba [Pathway:R-GMA-8934108] Short day regulated expression of florigens - Glycine max [Pathway:R-CRU-8934108] Short day regulated expression of florigens - Capsella rubella [Pathway:R-HLP-8934108] Short day regulated expression of florigens - Humulus lupulus var. lupulus [Pathway:R-PVU-8934108] Short day regulated expression of florigens - Phaseolus vulgaris [Pathway:R-GSO-8934108] Short day regulated expression of florigens - Glycine soja [Pathway:R-CCA-8934108] Short day regulated expression of florigens - Cajanus cajan [Pathway:R-LPR-8934108] Short day regulated expression of florigens - Lolium perenne [Pathway:R-PTA-8934108] Short day regulated expression of florigens - Pinus taeda [Pathway:R-FCR-8934108] Short day regulated expression of florigens - Ficus carica [Pathway:R-AHA-8934108] Short day regulated expression of florigens - Arabidopsis halleri [Pathway:R-LPE-8934108] Short day regulated expression of florigens - Leersia perrieri [Pathway:R-TTU-8934108] Short day regulated expression of florigens - Triticum turgidum [Pathway:R-MDO-8934108] Short day regulated expression of florigens - Malus domestica [Pathway:R-TSP-8934108] Short day regulated expression of florigens - Triticum spelta subsp. spelta [Pathway:R-TAE-8934108] Short day regulated expression of florigens - Triticum aestivum [Pathway:R-CCL-8934108] Short day regulated expression of florigens - Citrus clementina [Pathway:R-NNU-8934108] Short day regulated expression of florigens - Nelumbo nucifera [Pathway:R-OBA-8934108] Short day regulated expression of florigens - Oryza barthii [Pathway:R-SBI-8934108] Short day regulated expression of florigens - Sorghum bicolor [Pathway:R-TDI-8934108] Short day regulated expression of florigens - Triticum dicoccoides [Pathway:R-LST-8934108] Short day regulated expression of florigens - Lathyrus sativus [Pathway:R-CSK-8934108] Short day regulated expression of florigens - Cannabis sativa subsp. indica [Pathway:R-ALY-8934108] Short day regulated expression of florigens - Arabidopsis lyrata [Pathway:R-HAN-8934108] Short day regulated expression of florigens - Helianthus annuus [Pathway:R-MAC-8934108] Short day regulated expression of florigens - Musa acuminata [Pathway:R-MPO-8934108] Short day regulated expression of florigens - Marchantia polymorpha [Pathway:R-TPR-8934108] Short day regulated expression of florigens - Trifolium pratense [Pathway:R-PVE-8934108] Short day regulated expression of florigens - Pistacia vera [Pathway:R-VVN-8934108] Short day regulated expression of florigens - Vitis vinifera [Pathway:R-OME-8934108] Short day regulated expression of florigens - Oryza meridionalis [Pathway:R-BJU-8934108] Short day regulated expression of florigens - Brassica juncea [Pathway:R-ORU-8934108] Short day regulated expression of florigens - Oryza rufipogon [Pathway:R-PAV-8934108] Short day regulated expression of florigens - Prunus avium [Pathway:R-BNA-8934108] Short day regulated expression of florigens - Brassica napus [Pathway:R-TCA-8934108] Short day regulated expression of florigens - Theobroma cacao [Pathway:R-LSA-8934108] Short day regulated expression of florigens - Lactuca sativa [Pathway:R-PPA-8934108] Short day regulated expression of florigens - Physcomitrella patens [Pathway:R-OGL-8934108] Short day regulated expression of florigens - Oryza glaberrima [Pathway:R-FEX-8934108] Short day regulated expression of florigens - Fraxinus excelsior (European ash) [Pathway:R-MTR-8934108] Short day regulated expression of florigens - Medicago truncatula [Pathway:R-DCA-8934108] Short day regulated expression of florigens - Daucus carota [Pathway:R-HVU-8934108] Short day regulated expression of florigens - Hordeum vulgare [Pathway:R-GRA-8934108] Short day regulated expression of florigens - Gossypium raimondii [Pathway:R-DRO-8934108] Short day regulated expression of florigens - Dioscorea rotundata [Pathway:R-AUM-8934108] Short day regulated expression of florigens - Aegilops umbellulata [Pathway:R-NAT-8934108] Short day regulated expression of florigens - Nicotiana attenuata [Pathway:R-ATH-8934108] Short day regulated expression of florigens - Arabidopsis thaliana [Pathway:R-PSO-8934108] Short day regulated expression of florigens - Papaver somniferum [Pathway:R-SHI-8934108] Short day regulated expression of florigens - Salvia hispanica [Pathway:R-OPU-8934108] Short day regulated expression of florigens - Oryza punctata [Pathway:R-OGU-8934108] Short day regulated expression of florigens - Oryza glumaepatula [Pathway:R-PPE-8934108] Short day regulated expression of florigens - Prunus persica [Pathway:R-SIN-8934108] Short day regulated expression of florigens - Sesamum indicum [Pathway:R-CBA-8934108] Short day regulated expression of florigens - Chara braunii [Pathway:R-ACO-8934108] Short day regulated expression of florigens - Ananas comosus [Pathway:R-OOF-8934108] Short day regulated expression of florigens - Oryza officinalis [Pathway:R-VAN-8934108] Short day regulated expression of florigens - Vigna angularis [Pathway:R-ECU-8934108] Short day regulated expression of florigens - Eragrostis curvula [Pathway:R-CAR-8934108] Short day regulated expression of florigens - Cicer arietinum [Pathway:R-ITR-8934108] Short day regulated expression of florigens - Ipomoea triloba [Pathway:R-OBR-8934108] Short day regulated expression of florigens - Oryza brachyantha [Pathway:R-BDI-8934108] Short day regulated expression of florigens - Brachypodium distachyon [Pathway:R-PTI-8934108] Short day regulated expression of florigens - Populus trichocarpa [Pathway:R-QLO-8934108] Short day regulated expression of florigens - Quercus lobata [Pathway:R-CML-8934108] Short day regulated expression of florigens - Cucumis melo [Pathway:R-OAU-8934108] Short day regulated expression of florigens - Oryza australiensis [Pathway:R-CSC-8934108] Short day regulated expression of florigens - Cannabis sativa [Pathway:R-MES-8934108] Short day regulated expression of florigens - Manihot esculenta [Pathway:R-ASA-8934108] Short day regulated expression of florigens - Avena sativa [Pathway:R-JRE-8934108] Short day regulated expression of florigens - Juglans regia [Pathway:R-MGU-8934108] Short day regulated expression of florigens - Erythranthe guttata [Pathway:R-CSI-8934108] Short day regulated expression of florigens - Citrus sinensis [Pathway:R-PDA-8934108] Short day regulated expression of florigens - Phoenix dactylifera [Pathway:R-OGR-8934108] Short day regulated expression of florigens - Oryza meyeriana var. granulata [Pathway:R-STU-8934108] Short day regulated expression of florigens - Solanum tuberosum [Pathway:R-OMI-8934108] Short day regulated expression of florigens - Oryza minuta [Pathway:R-VRA-8934108] Short day regulated expression of florigens - Vigna radiata [Pathway:R-PED-8934108] Short day regulated expression of florigens - Phyllostachys edulis [Pathway:R-SIT-8934108] Short day regulated expression of florigens - Setaria italica [Pathway:R-ADU-8934108] Short day regulated expression of florigens - Arachis duranensis [Pathway:R-CCI-8934108] Short day regulated expression of florigens - Corymbia citriodora [Pathway:R-EGR-8934108] Short day regulated expression of florigens - Eucalyptus grandis [Pathway:R-CCD-8934108] Short day regulated expression of florigens - Cynara cardunculus var. scolymus [Pathway:R-CCN-8934108] Short day regulated expression of florigens - Coffea canephora [Pathway:R-PSA-8934108] Short day regulated expression of florigens - Pisum sativum [Pathway:R-PHH-8934108] Short day regulated expression of florigens - Panicum hallii var. hallii ("HAL2") [Pathway:R-ZMA-8934108] Short day regulated expression of florigens - Zea mays [Pathway:R-LAN-8934108] Short day regulated expression of florigens - Lupinus angustifolius [Pathway:R-ONI-8934108] Short day regulated expression of florigens - Oryza nivara [Pathway:R-OSI-8934108] Short day regulated expression of florigens - Oryza sativa Indica Group [Pathway:R-TTI-8934108] Short day regulated expression of florigens - Triticum timopheevii subsp. timopheevii [Pathway:R-RCH-8934108] Short day regulated expression of florigens - Rosa chinensis [Pathway:R-PAB-8934108] Short day regulated expression of florigens - Picea abies [Pathway:R-BRA-8934108] Short day regulated expression of florigens - Brassica rapa [Pathway:R-COL-8934108] Short day regulated expression of florigens - Corchorus olitorius [Pathway:R-CQI-8934108] Short day regulated expression of florigens - Chenopodium quinoa [Pathway:R-ETE-8934108] Short day regulated expression of florigens - Eragrostis tef [Pathway:R-SSP-8934108] Short day regulated expression of florigens - Saccharum spontaneum [Pathway:R-AOF-8934108] Short day regulated expression of florigens - Asparagus officinalis [Pathway:R-OLO-8934108] Short day regulated expression of florigens - Oryza longistaminata [Pathway:R-AIP-8934108] Short day regulated expression of florigens - Arachis ipaensis [Pathway:R-OES-8934108] Short day regulated expression of florigens - Olea europaea var. sylvestris [Pathway:R-ATR-8934108] Short day regulated expression of florigens - Amborella trichopoda [Pathway:R-JCU-8934108] Short day regulated expression of florigens - Jatropha curcas [Pathway:R-DEX-8934108] Short day regulated expression of florigens - Digitaria exilis [Pathway:R-CCP-8934108] Short day regulated expression of florigens - Corchorus capsularis [Pathway:R-HLH-8934108] Short day regulated expression of florigens - Humulus lupulus [Pathway:R-ZMY-8934108] Short day regulated expression of florigens - Zea mays ver5
releaseDate	2025-03-20
releaseStatus	NEW
schemaClass	Pathway
species	[Species:186860] Oryza sativa
stId	R-OSA-8934108
summation	[Summation:8934220] Rice has more complex and unique flowering pathway compared ...

Referrals

(hasEvent)

[Pathway:R-OSA-8934088] Inflorescence development - Oryza sativa