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Calvin cycle

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compartment	[Compartment:1141] plastid stroma
created	[InstanceEdit:1164949] Wu, Guanming, 2010-12-11
crossReference	[DatabaseIdentifier:1134024] RiceCyc:CALVIN-PWY
dbId	1119519
displayName	Calvin cycle
edited	[InstanceEdit:3230578] Beorchia, Dylan, 2013-01-04
eventOf	[Pathway:R-OSA-2883407] Carbohydrate metabolism - Oryza sativa
goBiologicalProcess	[GO_BiologicalProcess:8750] reductive pentose-phosphate cycle
hasDiagram	true
hasEvent	[Reaction:R-OSA-5149666] ribulose phosphate 3-epimerase - Oryza sativa [Reaction:R-OSA-5149665] Transketolase - Oryza sativa [Reaction:R-OSA-5149647] Ribose 5-phosphate epimerase - Oryza sativa [Reaction:R-OSA-5149692] Phosphoribulokinase - Oryza sativa [Reaction:R-OSA-5149664] Ribulose-bisphosphate carboxylase - Oryza sativa [Reaction:R-OSA-5149656] 1,3-bisphospho-D-glycerate + ADP <=> 3-phosphoglycerate + ATP - Oryza sativa [Reaction:R-OSA-5149634] Glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) (phosphorylating) - Oryza sativa [Reaction:R-OSA-5149641] D-glyceraldehyde 3-phosphate <=> dihydroxyacetone phosphate - Oryza sativa [Reaction:R-OSA-5149667] Fructose 1,6-bisphosphate <=> dihydroxyacetone phosphate + glyceraldehyde 3-phosphate - Oryza sativa [Reaction:R-OSA-5149652] dihydroxy-acetone-phosphate+D-erythrose-4-phosphate->D-sedoheptulose-1,7-bisphosphate - Oryza sativa [Reaction:R-OSA-5149638] Fructose-bisphosphatase - Oryza sativa [Reaction:R-OSA-5149642] Transketolase - Oryza sativa [Reaction:R-OSA-5149654] Sedoheptulose-bisphosphatase - Oryza sativa
isInDisease	false
isInferred	false
modified	[InstanceEdit:11540225] Elser, Justin, 2025-03-27
name	Calvin cycle photosynthetic dark reactions photosynthetic CO₂ fixation reductive pentose phosphate pathway Calvin-Benson-Bassham cycle photosynthesis - dark reaction carbon fixation Calvin-Benson cycle pathway101753
orthologousEvent	[Pathway:R-MES-1119519] Calvin cycle - Manihot esculenta [Pathway:R-CCP-1119519] Calvin cycle - Corchorus capsularis [Pathway:R-HAN-1119519] Calvin cycle - Helianthus annuus [Pathway:R-TDI-1119519] Calvin cycle - Triticum dicoccoides [Pathway:R-ITR-1119519] Calvin cycle - Ipomoea triloba [Pathway:R-AIP-1119519] Calvin cycle - Arachis ipaensis [Pathway:R-VAN-1119519] Calvin cycle - Vigna angularis [Pathway:R-CCR-1119519] Calvin cycle - Chondrus crispus [Pathway:R-STU-1119519] Calvin cycle - Solanum tuberosum [Pathway:R-ZMY-1119519] Calvin cycle - Zea mays ver5 [Pathway:R-NCO-1119519] Calvin cycle - Nymphaea colorata [Pathway:R-CSI-1119519] Calvin cycle - Citrus sinensis [Pathway:R-CCL-1119519] Calvin cycle - Citrus clementina [Pathway:R-JRE-1119519] Calvin cycle - Juglans regia [Pathway:R-EGR-1119519] Calvin cycle - Eucalyptus grandis [Pathway:R-ECU-1119519] Calvin cycle - Eragrostis curvula [Pathway:R-BDI-1119519] Calvin cycle - Brachypodium distachyon [Pathway:R-SPC-1119519] Calvin cycle - Synechocystis sp. PCC 6803 [Pathway:R-OBA-1119519] Calvin cycle - Oryza barthii [Pathway:R-TPR-1119519] Calvin cycle - Trifolium pratense [Pathway:R-CML-1119519] Calvin cycle - Cucumis melo [Pathway:R-JCU-1119519] Calvin cycle - Jatropha curcas [Pathway:R-PDA-1119519] Calvin cycle - Phoenix dactylifera [Pathway:R-OME-1119519] Calvin cycle - Oryza meridionalis [Pathway:R-PTI-1119519] Calvin cycle - Populus trichocarpa [Pathway:R-SSP-1119519] Calvin cycle - Saccharum spontaneum [Pathway:R-CCA-1119519] Calvin cycle - Cajanus cajan [Pathway:R-SMO-1119519] Calvin cycle - Selaginella moellendorffii [Pathway:R-GRA-1119519] Calvin cycle - Gossypium raimondii [Pathway:R-OKA-1119519] Calvin cycle - Oryza sativa aus subgroup [Pathway:R-ZJA-1119519] Calvin cycle - Zoysia japonica [Pathway:R-CAN-1119519] Calvin cycle - Capsicum annuum [Pathway:R-PAB-1119519] Calvin cycle - Picea abies [Pathway:R-LSA-1119519] Calvin cycle - Lactuca sativa [Pathway:R-SHI-1119519] Calvin cycle - Salvia hispanica [Pathway:R-OGL-1119519] Calvin cycle - Oryza glaberrima [Pathway:R-PHH-1119519] Calvin cycle - Panicum hallii var. hallii ("HAL2") [Pathway:R-LPE-1119519] Calvin cycle - Leersia perrieri [Pathway:R-CCN-1119519] Calvin cycle - Coffea canephora [Pathway:R-NAT-1119519] Calvin cycle - Nicotiana attenuata [Pathway:R-CME-1119519] Calvin cycle - Cyanidioschyzon merolae [Pathway:R-ETE-1119519] Calvin cycle - Eragrostis tef [Pathway:R-SVI-1119519] Calvin cycle - Setaria viridis [Pathway:R-PPA-1119519] Calvin cycle - Physcomitrella patens [Pathway:R-CLA-1119519] Calvin cycle - Citrullus lanatus [Pathway:R-DRO-1119519] Calvin cycle - Dioscorea rotundata [Pathway:R-BNA-1119519] Calvin cycle - Brassica napus [Pathway:R-ONI-1119519] Calvin cycle - Oryza nivara [Pathway:R-TCA-1119519] Calvin cycle - Theobroma cacao [Pathway:R-LST-1119519] Calvin cycle - Lathyrus sativus [Pathway:R-ACH-1119519] Calvin cycle - Actinidia chinensis [Pathway:R-MGU-1119519] Calvin cycle - Erythranthe guttata [Pathway:R-AHY-1119519] Calvin cycle - Arachis hypogaea [Pathway:R-HLH-1119519] Calvin cycle - Humulus lupulus [Pathway:R-LAN-1119519] Calvin cycle - Lupinus angustifolius [Pathway:R-ATA-1119519] Calvin cycle - Aegilops tauschii [Pathway:R-BJU-1119519] Calvin cycle - Brassica juncea [Pathway:R-CCI-1119519] Calvin cycle - Corymbia citriodora [Pathway:R-PSO-1119519] Calvin cycle - Papaver somniferum [Pathway:R-ATR-1119519] Calvin cycle - Amborella trichopoda [Pathway:R-FCR-1119519] Calvin cycle - Ficus carica [Pathway:R-CSK-1119519] Calvin cycle - Cannabis sativa subsp. indica [Pathway:R-PAV-1119519] Calvin cycle - Prunus avium [Pathway:R-MTR-1119519] Calvin cycle - Medicago truncatula [Pathway:R-CRU-1119519] Calvin cycle - Capsella rubella [Pathway:R-BRA-1119519] Calvin cycle - Brassica rapa [Pathway:R-HLP-1119519] Calvin cycle - Humulus lupulus var. lupulus [Pathway:R-OPU-1119519] Calvin cycle - Oryza punctata [Pathway:R-HVU-1119519] Calvin cycle - Hordeum vulgare [Pathway:R-TUR-1119519] Calvin cycle - Triticum urartu [Pathway:R-ALY-1119519] Calvin cycle - Arabidopsis lyrata [Pathway:R-AHA-1119519] Calvin cycle - Arabidopsis halleri [Pathway:R-VUN-1119519] Calvin cycle - Vigna unguiculata [Pathway:R-ASA-1119519] Calvin cycle - Avena sativa [Pathway:R-PTA-1119519] Calvin cycle - Pinus taeda [Pathway:R-CAR-1119519] Calvin cycle - Cicer arietinum [Pathway:R-GSU-1119519] Calvin cycle - Galdieria sulphuraria [Pathway:R-RCH-1119519] Calvin cycle - Rosa chinensis [Pathway:R-TTI-1119519] Calvin cycle - Triticum timopheevii subsp. timopheevii [Pathway:R-NNU-1119519] Calvin cycle - Nelumbo nucifera [Pathway:R-VFA-1119519] Calvin cycle - Vicia faba var. faba [Pathway:R-QSU-1119519] Calvin cycle - Quercus suber [Pathway:R-PVU-1119519] Calvin cycle - Phaseolus vulgaris [Pathway:R-BVU-1119519] Calvin cycle - Beta vulgaris [Pathway:R-OAU-1119519] Calvin cycle - Oryza australiensis [Pathway:R-PHA-1119519] Calvin cycle - Panicum hallii ("FIL2") [Pathway:R-OBR-1119519] Calvin cycle - Oryza brachyantha [Pathway:R-CRE-1119519] Calvin cycle - Chlamydomonas reinhardtii [Pathway:R-VRA-1119519] Calvin cycle - Vigna radiata [Pathway:R-ADU-1119519] Calvin cycle - Arachis duranensis [Pathway:R-TTU-1119519] Calvin cycle - Triticum turgidum [Pathway:R-SLY-1119519] Calvin cycle - Solanum lycopersicum [Pathway:R-SBI-1119519] Calvin cycle - Sorghum bicolor [Pathway:R-ECG-1119519] Calvin cycle - Echinochloa crus-galli [Pathway:R-OGU-1119519] Calvin cycle - Oryza glumaepatula [Pathway:R-PPE-1119519] Calvin cycle - Prunus persica [Pathway:R-SIN-1119519] Calvin cycle - Sesamum indicum [Pathway:R-SCR-1119519] Calvin cycle - Secale cereale [Pathway:R-GSO-1119519] Calvin cycle - Glycine soja [Pathway:R-DCA-1119519] Calvin cycle - Daucus carota [Pathway:R-CSC-1119519] Calvin cycle - Cannabis sativa [Pathway:R-CSA-1119519] Calvin cycle - Cucumis sativus [Pathway:R-FVE-1119519] Calvin cycle - Fragaria vesca [Pathway:R-TAE-1119519] Calvin cycle - Triticum aestivum [Pathway:R-COL-1119519] Calvin cycle - Corchorus olitorius [Pathway:R-TSP-1119519] Calvin cycle - Triticum spelta subsp. spelta [Pathway:R-ATH-1119519] Calvin cycle - Arabidopsis thaliana [Pathway:R-OSI-1119519] Calvin cycle - Oryza sativa Indica Group [Pathway:R-MDO-1119519] Calvin cycle - Malus domestica [Pathway:R-OLO-1119519] Calvin cycle - Oryza longistaminata [Pathway:R-ORU-1119519] Calvin cycle - Oryza rufipogon [Pathway:R-BOL-1119519] Calvin cycle - Brassica oleracea [Pathway:R-DEX-1119519] Calvin cycle - Digitaria exilis [Pathway:R-QLO-1119519] Calvin cycle - Quercus lobata [Pathway:R-CQI-1119519] Calvin cycle - Chenopodium quinoa [Pathway:R-CCD-1119519] Calvin cycle - Cynara cardunculus var. scolymus [Pathway:R-MPO-1119519] Calvin cycle - Marchantia polymorpha [Pathway:R-OES-1119519] Calvin cycle - Olea europaea var. sylvestris [Pathway:R-FEX-1119519] Calvin cycle - Fraxinus excelsior (European ash) [Pathway:R-OLU-1119519] Calvin cycle - Ostreococcus lucimarinus [Pathway:R-MAC-1119519] Calvin cycle - Musa acuminata [Pathway:R-PED-1119519] Calvin cycle - Phyllostachys edulis [Pathway:R-SIT-1119519] Calvin cycle - Setaria italica [Pathway:R-ACO-1119519] Calvin cycle - Ananas comosus [Pathway:R-VVN-1119519] Calvin cycle - Vitis vinifera [Pathway:R-OMI-1119519] Calvin cycle - Oryza minuta [Pathway:R-GMA-1119519] Calvin cycle - Glycine max [Pathway:R-PVE-1119519] Calvin cycle - Pistacia vera [Pathway:R-AOF-1119519] Calvin cycle - Asparagus officinalis [Pathway:R-CBA-1119519] Calvin cycle - Chara braunii [Pathway:R-OEU-1119519] Calvin cycle - Olea europaea [Pathway:R-OOF-1119519] Calvin cycle - Oryza officinalis [Pathway:R-OGR-1119519] Calvin cycle - Oryza meyeriana var. granulata [Pathway:R-CST-1119519] Calvin cycle - Camelina sativa [Pathway:R-LPR-1119519] Calvin cycle - Lolium perenne [Pathway:R-AUM-1119519] Calvin cycle - Aegilops umbellulata [Pathway:R-PSA-1119519] Calvin cycle - Pisum sativum [Pathway:R-ZMA-1119519] Calvin cycle - Zea mays
revised	[InstanceEdit:5149688] Amarasinghe, V, 2013-01-04 [InstanceEdit:3230580] Amarasinghe, V, 2013-01-04
schemaClass	Pathway
species	[Species:186860] Oryza sativa
stId	R-OSA-1119519
summation	[Summation:3230583] Calvin Cycle [Summation:2850146] Developed by Gramene.org [Summation:1119236] Data source: RiceCyc

Referrals

(hasEvent)

[Pathway:R-OSA-2883407] Carbohydrate metabolism - Oryza sativa