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Spermidine biosynthesis

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created	[InstanceEdit:1164949] Wu, Guanming, 2010-12-11
crossReference	[DatabaseIdentifier:1140617] RiceCyc:BSUBPOLYAMSYN-PWY
dbId	1119343
displayName	Spermidine biosynthesis
eventOf	[Pathway:R-OSA-5096066] Amine and polyamine biosynthesis - Oryza sativa
goBiologicalProcess	[GO_BiologicalProcess:9861] spermidine biosynthetic process
hasDiagram	true
hasEvent	[Reaction:R-OSA-1121644] Adenosylmethionine decarboxylase - Oryza sativa [Reaction:R-OSA-1121445] Spermidine synthase - Oryza sativa
isInDisease	false
isInferred	false
modified	[InstanceEdit:11540225] Elser, Justin, 2025-03-27
name	Spermidine biosynthesis Arginine degradation to spermidine pathway100152
orthologousEvent	[Pathway:R-PAV-1119343] Spermidine biosynthesis - Prunus avium [Pathway:R-OEU-1119343] Spermidine biosynthesis - Olea europaea [Pathway:R-FVE-1119343] Spermidine biosynthesis - Fragaria vesca [Pathway:R-PPA-1119343] Spermidine biosynthesis - Physcomitrella patens [Pathway:R-OGL-1119343] Spermidine biosynthesis - Oryza glaberrima [Pathway:R-BNA-1119343] Spermidine biosynthesis - Brassica napus [Pathway:R-TCA-1119343] Spermidine biosynthesis - Theobroma cacao [Pathway:R-ECG-1119343] Spermidine biosynthesis - Echinochloa crus-galli [Pathway:R-CAN-1119343] Spermidine biosynthesis - Capsicum annuum [Pathway:R-DRO-1119343] Spermidine biosynthesis - Dioscorea rotundata [Pathway:R-ATR-1119343] Spermidine biosynthesis - Amborella trichopoda [Pathway:R-AHY-1119343] Spermidine biosynthesis - Arachis hypogaea [Pathway:R-FEX-1119343] Spermidine biosynthesis - Fraxinus excelsior (European ash) [Pathway:R-PSO-1119343] Spermidine biosynthesis - Papaver somniferum [Pathway:R-QLO-1119343] Spermidine biosynthesis - Quercus lobata [Pathway:R-ACH-1119343] Spermidine biosynthesis - Actinidia chinensis [Pathway:R-BVU-1119343] Spermidine biosynthesis - Beta vulgaris [Pathway:R-LST-1119343] Spermidine biosynthesis - Lathyrus sativus [Pathway:R-OME-1119343] Spermidine biosynthesis - Oryza meridionalis [Pathway:R-QSU-1119343] Spermidine biosynthesis - Quercus suber [Pathway:R-ATA-1119343] Spermidine biosynthesis - Aegilops tauschii [Pathway:R-LPE-1119343] Spermidine biosynthesis - Leersia perrieri [Pathway:R-PPE-1119343] Spermidine biosynthesis - Prunus persica [Pathway:R-SHI-1119343] Spermidine biosynthesis - Salvia hispanica [Pathway:R-TAE-1119343] Spermidine biosynthesis - Triticum aestivum [Pathway:R-ATH-1119343] Spermidine biosynthesis - Arabidopsis thaliana [Pathway:R-TTU-1119343] Spermidine biosynthesis - Triticum turgidum [Pathway:R-NAT-1119343] Spermidine biosynthesis - Nicotiana attenuata [Pathway:R-OBR-1119343] Spermidine biosynthesis - Oryza brachyantha [Pathway:R-ZJA-1119343] Spermidine biosynthesis - Zoysia japonica [Pathway:R-CCN-1119343] Spermidine biosynthesis - Coffea canephora [Pathway:R-SCR-1119343] Spermidine biosynthesis - Secale cereale [Pathway:R-OKA-1119343] Spermidine biosynthesis - Oryza sativa aus subgroup [Pathway:R-CRU-1119343] Spermidine biosynthesis - Capsella rubella [Pathway:R-CSI-1119343] Spermidine biosynthesis - Citrus sinensis [Pathway:R-CML-1119343] Spermidine biosynthesis - Cucumis melo [Pathway:R-PDA-1119343] Spermidine biosynthesis - Phoenix dactylifera [Pathway:R-JRE-1119343] Spermidine biosynthesis - Juglans regia [Pathway:R-GMA-1119343] Spermidine biosynthesis - Glycine max [Pathway:R-ITR-1119343] Spermidine biosynthesis - Ipomoea triloba [Pathway:R-OMI-1119343] Spermidine biosynthesis - Oryza minuta [Pathway:R-ASA-1119343] Spermidine biosynthesis - Avena sativa [Pathway:R-AIP-1119343] Spermidine biosynthesis - Arachis ipaensis [Pathway:R-FCR-1119343] Spermidine biosynthesis - Ficus carica [Pathway:R-VRA-1119343] Spermidine biosynthesis - Vigna radiata [Pathway:R-TDI-1119343] Spermidine biosynthesis - Triticum dicoccoides [Pathway:R-PED-1119343] Spermidine biosynthesis - Phyllostachys edulis [Pathway:R-MES-1119343] Spermidine biosynthesis - Manihot esculenta [Pathway:R-CRE-1119343] Spermidine biosynthesis - Chlamydomonas reinhardtii [Pathway:R-BJU-1119343] Spermidine biosynthesis - Brassica juncea [Pathway:R-PVU-1119343] Spermidine biosynthesis - Phaseolus vulgaris [Pathway:R-OAU-1119343] Spermidine biosynthesis - Oryza australiensis [Pathway:R-VUN-1119343] Spermidine biosynthesis - Vigna unguiculata [Pathway:R-CQI-1119343] Spermidine biosynthesis - Chenopodium quinoa [Pathway:R-BDI-1119343] Spermidine biosynthesis - Brachypodium distachyon [Pathway:R-HLH-1119343] Spermidine biosynthesis - Humulus lupulus [Pathway:R-CAR-1119343] Spermidine biosynthesis - Cicer arietinum [Pathway:R-NNU-1119343] Spermidine biosynthesis - Nelumbo nucifera [Pathway:R-ZMY-1119343] Spermidine biosynthesis - Zea mays ver5 [Pathway:R-ACO-1119343] Spermidine biosynthesis - Ananas comosus [Pathway:R-CCL-1119343] Spermidine biosynthesis - Citrus clementina [Pathway:R-OSI-1119343] Spermidine biosynthesis - Oryza sativa Indica Group [Pathway:R-CBA-1119343] Spermidine biosynthesis - Chara braunii [Pathway:R-VVN-1119343] Spermidine biosynthesis - Vitis vinifera [Pathway:R-ALY-1119343] Spermidine biosynthesis - Arabidopsis lyrata [Pathway:R-LAN-1119343] Spermidine biosynthesis - Lupinus angustifolius [Pathway:R-PVE-1119343] Spermidine biosynthesis - Pistacia vera [Pathway:R-COL-1119343] Spermidine biosynthesis - Corchorus olitorius [Pathway:R-CCD-1119343] Spermidine biosynthesis - Cynara cardunculus var. scolymus [Pathway:R-TUR-1119343] Spermidine biosynthesis - Triticum urartu [Pathway:R-TSP-1119343] Spermidine biosynthesis - Triticum spelta subsp. spelta [Pathway:R-BRA-1119343] Spermidine biosynthesis - Brassica rapa [Pathway:R-ZMA-1119343] Spermidine biosynthesis - Zea mays [Pathway:R-CST-1119343] Spermidine biosynthesis - Camelina sativa [Pathway:R-LSA-1119343] Spermidine biosynthesis - Lactuca sativa [Pathway:R-OLO-1119343] Spermidine biosynthesis - Oryza longistaminata [Pathway:R-BOL-1119343] Spermidine biosynthesis - Brassica oleracea [Pathway:R-CLA-1119343] Spermidine biosynthesis - Citrullus lanatus [Pathway:R-ORU-1119343] Spermidine biosynthesis - Oryza rufipogon [Pathway:R-DEX-1119343] Spermidine biosynthesis - Digitaria exilis [Pathway:R-CSA-1119343] Spermidine biosynthesis - Cucumis sativus [Pathway:R-SLY-1119343] Spermidine biosynthesis - Solanum lycopersicum [Pathway:R-DCA-1119343] Spermidine biosynthesis - Daucus carota [Pathway:R-CSC-1119343] Spermidine biosynthesis - Cannabis sativa [Pathway:R-PTI-1119343] Spermidine biosynthesis - Populus trichocarpa [Pathway:R-SSP-1119343] Spermidine biosynthesis - Saccharum spontaneum [Pathway:R-OBA-1119343] Spermidine biosynthesis - Oryza barthii [Pathway:R-PAB-1119343] Spermidine biosynthesis - Picea abies [Pathway:R-MGU-1119343] Spermidine biosynthesis - Erythranthe guttata [Pathway:R-OGU-1119343] Spermidine biosynthesis - Oryza glumaepatula [Pathway:R-CCR-1119343] Spermidine biosynthesis - Chondrus crispus [Pathway:R-SBI-1119343] Spermidine biosynthesis - Sorghum bicolor [Pathway:R-SIN-1119343] Spermidine biosynthesis - Sesamum indicum [Pathway:R-SMO-1119343] Spermidine biosynthesis - Selaginella moellendorffii [Pathway:R-PHH-1119343] Spermidine biosynthesis - Panicum hallii var. hallii ("HAL2") [Pathway:R-GRA-1119343] Spermidine biosynthesis - Gossypium raimondii [Pathway:R-CME-1119343] Spermidine biosynthesis - Cyanidioschyzon merolae [Pathway:R-RCH-1119343] Spermidine biosynthesis - Rosa chinensis [Pathway:R-GSO-1119343] Spermidine biosynthesis - Glycine soja [Pathway:R-VAN-1119343] Spermidine biosynthesis - Vigna angularis [Pathway:R-NCO-1119343] Spermidine biosynthesis - Nymphaea colorata [Pathway:R-HLP-1119343] Spermidine biosynthesis - Humulus lupulus var. lupulus [Pathway:R-EGR-1119343] Spermidine biosynthesis - Eucalyptus grandis [Pathway:R-LPR-1119343] Spermidine biosynthesis - Lolium perenne [Pathway:R-STU-1119343] Spermidine biosynthesis - Solanum tuberosum [Pathway:R-VFA-1119343] Spermidine biosynthesis - Vicia faba var. faba [Pathway:R-CCP-1119343] Spermidine biosynthesis - Corchorus capsularis [Pathway:R-OGR-1119343] Spermidine biosynthesis - Oryza meyeriana var. granulata [Pathway:R-MAC-1119343] Spermidine biosynthesis - Musa acuminata [Pathway:R-AHA-1119343] Spermidine biosynthesis - Arabidopsis halleri [Pathway:R-MPO-1119343] Spermidine biosynthesis - Marchantia polymorpha [Pathway:R-CCI-1119343] Spermidine biosynthesis - Corymbia citriodora [Pathway:R-CCA-1119343] Spermidine biosynthesis - Cajanus cajan [Pathway:R-PHA-1119343] Spermidine biosynthesis - Panicum hallii ("FIL2") [Pathway:R-ECU-1119343] Spermidine biosynthesis - Eragrostis curvula [Pathway:R-OLU-1119343] Spermidine biosynthesis - Ostreococcus lucimarinus [Pathway:R-TPR-1119343] Spermidine biosynthesis - Trifolium pratense [Pathway:R-HAN-1119343] Spermidine biosynthesis - Helianthus annuus [Pathway:R-ADU-1119343] Spermidine biosynthesis - Arachis duranensis [Pathway:R-ONI-1119343] Spermidine biosynthesis - Oryza nivara [Pathway:R-AUM-1119343] Spermidine biosynthesis - Aegilops umbellulata [Pathway:R-CSK-1119343] Spermidine biosynthesis - Cannabis sativa subsp. indica [Pathway:R-JCU-1119343] Spermidine biosynthesis - Jatropha curcas [Pathway:R-OOF-1119343] Spermidine biosynthesis - Oryza officinalis [Pathway:R-MDO-1119343] Spermidine biosynthesis - Malus domestica [Pathway:R-AOF-1119343] Spermidine biosynthesis - Asparagus officinalis [Pathway:R-OES-1119343] Spermidine biosynthesis - Olea europaea var. sylvestris [Pathway:R-SIT-1119343] Spermidine biosynthesis - Setaria italica [Pathway:R-PTA-1119343] Spermidine biosynthesis - Pinus taeda [Pathway:R-ETE-1119343] Spermidine biosynthesis - Eragrostis tef [Pathway:R-TTI-1119343] Spermidine biosynthesis - Triticum timopheevii subsp. timopheevii [Pathway:R-PSA-1119343] Spermidine biosynthesis - Pisum sativum [Pathway:R-SVI-1119343] Spermidine biosynthesis - Setaria viridis [Pathway:R-OPU-1119343] Spermidine biosynthesis - Oryza punctata [Pathway:R-MTR-1119343] Spermidine biosynthesis - Medicago truncatula [Pathway:R-HVU-1119343] Spermidine biosynthesis - Hordeum vulgare
revised	[InstanceEdit:5138192] Amarasinghe, V, 2013-10-02
schemaClass	Pathway
species	[Species:186860] Oryza sativa
stId	R-OSA-1119343
summation	[Summation:2850146] Developed by Gramene.org

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(hasEvent)

[Pathway:R-OSA-5096066] Amine and polyamine biosynthesis - Oryza sativa

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