Plant Reactome Pathway Database

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 Plant Reactome Pathway Database

  • About
    • What is Plant Reactome ?
    • Team
    • Scientific Advisory Board
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    • Data Schema
    • Release Summary
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Schema > Pathway > Entries

Xylose degradation

Go to Details
compartment
  • [Compartment:70101] cytosol
created [InstanceEdit:10774846] Elser, Justin, 2025-03-25
dbId 10784511
displayName Xylose degradation
eventOf
  • [Pathway:R-OBA-2883407] Carbohydrate metabolism - Oryza barthii
evidenceType [EvidenceType:9939645] inferred by electronic annotation
hasDiagram true
hasEvent
  • [Reaction:R-OBA-1121296] Xylose isomerase - Oryza barthii
  • [Reaction:R-OBA-1121240] Xylulokinase - Oryza barthii
inferredFrom
  • [Pathway:R-OSA-1119451] Xylose degradation - Oryza sativa
isInDisease false
isInferred true
name
  • Xylose degradation
  • Xylose catabolism
  • pathway99348
releaseDate 2025-02-15
schemaClass Pathway
species
  • [Species:9030142] Oryza barthii
stId R-OBA-1119451
summation
  • [Summation:9939644] This event has been computationally inferred from an event that has been demonstrated in another species.

    The inference is based on the homology mappings from Ensembl Compara. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 1% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.

    More details and caveats of the event inference in Reactome.

Referrals

(hasEvent)
  • [Pathway:R-OBA-2883407] Carbohydrate metabolism - Oryza barthii
(inferredTo)
  • [Pathway:R-OSA-1119451] Xylose degradation - Oryza sativa
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