Reactome: A Curated Pathway Database

Attributes of class 'StableIdentifier'

Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
identifier 1 TEXT N/A StableIdentifier   TEXT
identifierVersion 1 TEXT N/A StableIdentifier   TEXT
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
oldIdentifier 1 TEXT N/A StableIdentifier   TEXT
oldIdentifierVersion 1 TEXT N/A StableIdentifier   TEXT
released 1 OTHER N/A StableIdentifier   ENUM('TRUE','FALSE')
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'StableIdentifier' instances

Class name Attribute name Cardinality
Publication stableIdentifier 1
EntityFunctionalStatus stableIdentifier 1
OpenSet stableIdentifier 1
EntitySet stableIdentifier 1
GO_MolecularFunction stableIdentifier 1
EntityWithAccessionedSequence stableIdentifier 1
ReferenceEntity stableIdentifier 1
PathwayDiagramItem stableIdentifier 1
IntraChainCrosslinkedResidue stableIdentifier 1
ReferenceRNASequence stableIdentifier 1
ConcurrentEventSet stableIdentifier 1
ReferenceIsoform stableIdentifier 1
ReactionlikeEvent stableIdentifier 1
OtherEntity stableIdentifier 1
Depolymerisation stableIdentifier 1
FailedReaction stableIdentifier 1
ReferenceDNASequence stableIdentifier 1
Taxon stableIdentifier 1
EntityCompartment stableIdentifier 1
ReferenceMolecule stableIdentifier 1
Disease stableIdentifier 1
FragmentInsertionModification stableIdentifier 1
SequenceOntology stableIdentifier 1
Edge stableIdentifier 1
Person stableIdentifier 1
ChemicalDrug stableIdentifier 1
TranslationalModification stableIdentifier 1
_Release stableIdentifier 1
EntityVertex stableIdentifier 1
GO_BiologicalProcess stableIdentifier 1
CellType stableIdentifier 1
Figure stableIdentifier 1
PathwayCoordinates stableIdentifier 1
GeneticallyModifiedResidue stableIdentifier 1
FragmentModification stableIdentifier 1
CandidateSet stableIdentifier 1
URL stableIdentifier 1
Drug stableIdentifier 1
Regulation stableIdentifier 1
DatabaseIdentifier stableIdentifier 1
GenomeEncodedEntity stableIdentifier 1
Compartment stableIdentifier 1
PositiveRegulation stableIdentifier 1
ReferenceSequence stableIdentifier 1
DeletedControlledVocabulary stableIdentifier 1
DefinedSet stableIdentifier 1
ProteinDrug stableIdentifier 1
InterChainCrosslinkedResidue stableIdentifier 1
EvidenceType stableIdentifier 1
FunctionalStatus stableIdentifier 1
RNADrug stableIdentifier 1
ExternalOntology stableIdentifier 1
CrosslinkedResidue stableIdentifier 1
NegativeRegulation stableIdentifier 1
Affiliation stableIdentifier 1
BlackBoxEvent stableIdentifier 1
GO_CellularComponent stableIdentifier 1
ReferenceGroup stableIdentifier 1
GroupModifiedResidue stableIdentifier 1
StableIdentifier stableIdentifier 1
ReferenceGeneProduct stableIdentifier 1
Species stableIdentifier 1
PathwayDiagram stableIdentifier 1
ReplacedResidue stableIdentifier 1
PhysicalEntity stableIdentifier 1
Complex stableIdentifier 1
Event stableIdentifier 1
CatalystActivity stableIdentifier 1
FragmentReplacedModification stableIdentifier 1
FrontPage stableIdentifier 1
PositiveGeneExpressionRegulation stableIdentifier 1
Vertex stableIdentifier 1
Requirement stableIdentifier 1
DatabaseObject stableIdentifier 1
PsiMod stableIdentifier 1
_AttributeValueBeforeChange stableIdentifier 1
VertexSearchableTerm stableIdentifier 1
Summation stableIdentifier 1
Book stableIdentifier 1
InstanceEdit stableIdentifier 1
AbstractModifiedResidue stableIdentifier 1
ModifiedResidue stableIdentifier 1
Reaction stableIdentifier 1
SimpleEntity stableIdentifier 1
ControlledVocabulary stableIdentifier 1
PathwayVertex stableIdentifier 1
ReferenceTherapeutic stableIdentifier 1
_InstanceBeforeChange stableIdentifier 1
ReactionVertex stableIdentifier 1
FragmentDeletionModification stableIdentifier 1
FunctionalStatusType stableIdentifier 1
Polymerisation stableIdentifier 1
NegativeGeneExpressionRegulation stableIdentifier 1
Pathway stableIdentifier 1
_Deleted stableIdentifier 1
Polymer stableIdentifier 1
LiteratureReference stableIdentifier 1
ReactionCoordinates stableIdentifier 1
ReferenceDatabase stableIdentifier 1

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.