Reactome: A Curated Pathway Database

Attributes of class 'ProteinDrug'

Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
authored 1 INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
cellType 1 INSTANCE CellType PhysicalEntity ALL INTEGER(10) UNSIGNED
compartment + INSTANCE EntityCompartment PhysicalEntity ALL INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
crossReference + INSTANCE DatabaseIdentifier PhysicalEntity   INTEGER(10) UNSIGNED
definition 1 TEXT N/A PhysicalEntity   TEXT
disease + INSTANCE Disease PhysicalEntity ALL INTEGER(10) UNSIGNED
edited + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
figure + INSTANCE Figure PhysicalEntity   INTEGER(10) UNSIGNED
goCellularComponent 1 INSTANCE GO_CellularComponent PhysicalEntity   INTEGER(10) UNSIGNED
inferredFrom + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
inferredTo + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
literatureReference + INSTANCE Publication PhysicalEntity   INTEGER(10) UNSIGNED
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
name + TEXT N/A PhysicalEntity   TEXT
referenceEntity 1 INSTANCE ReferenceGeneProduct ProteinDrug ALL INTEGER(10) UNSIGNED
referenceTherapeutic 1 INSTANCE ReferenceTherapeutic Drug ALL INTEGER(10) UNSIGNED
reviewed + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
revised + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED
summation + INSTANCE Summation PhysicalEntity   INTEGER(10) UNSIGNED
systematicName 1 TEXT N/A PhysicalEntity   TEXT

Referers of class 'ProteinDrug' instances

Class name Attribute name Cardinality
ReactionlikeEvent input +
Polymerisation input +
Depolymerisation input +
Reaction input +
BlackBoxEvent input +
FailedReaction input +
Polymer repeatedUnit +
Complex hasComponent +
VertexSearchableTerm termProvider +
ConcurrentEventSet focusEntity +
_Deleted replacementInstances +
RNADrug inferredTo +
EntityWithAccessionedSequence inferredTo +
OtherEntity inferredTo +
Complex inferredTo +
PhysicalEntity inferredTo +
Polymer inferredTo +
ChemicalDrug inferredTo +
OpenSet inferredTo +
ProteinDrug inferredTo +
EntitySet inferredTo +
DefinedSet inferredTo +
Drug inferredTo +
CandidateSet inferredTo +
SimpleEntity inferredTo +
GenomeEncodedEntity inferredTo +
OpenSet hasMember +
EntitySet hasMember +
DefinedSet hasMember +
CandidateSet hasMember +
EntitySet inferredFrom +
Drug inferredFrom +
DefinedSet inferredFrom +
SimpleEntity inferredFrom +
GenomeEncodedEntity inferredFrom +
CandidateSet inferredFrom +
OpenSet inferredFrom +
ProteinDrug inferredFrom +
ChemicalDrug inferredFrom +
Complex inferredFrom +
PhysicalEntity inferredFrom +
Polymer inferredFrom +
RNADrug inferredFrom +
EntityWithAccessionedSequence inferredFrom +
OtherEntity inferredFrom +
ReactionlikeEvent requiredInputComponent +
Polymerisation requiredInputComponent +
Depolymerisation requiredInputComponent +
Reaction requiredInputComponent +
BlackBoxEvent requiredInputComponent +
FailedReaction requiredInputComponent +
CatalystActivity physicalEntity 1
EntityFunctionalStatus physicalEntity 1
ReactionlikeEvent output +
Polymerisation output +
Depolymerisation output +
Reaction output +
BlackBoxEvent output +
FailedReaction output +
EntityVertex representedInstance 1
CandidateSet hasCandidate +
FailedReaction entityOnOtherCell +
BlackBoxEvent entityOnOtherCell +
Reaction entityOnOtherCell +
Complex entityOnOtherCell +
Polymerisation entityOnOtherCell +
Depolymerisation entityOnOtherCell +
ReactionlikeEvent entityOnOtherCell +
Requirement regulator 1
PositiveRegulation regulator 1
NegativeRegulation regulator 1
Regulation regulator 1
NegativeGeneExpressionRegulation regulator 1
PositiveGeneExpressionRegulation regulator 1
NegativeRegulation activeUnit +
Regulation activeUnit +
PositiveGeneExpressionRegulation activeUnit +
NegativeGeneExpressionRegulation activeUnit +
Requirement activeUnit +
CatalystActivity activeUnit +
PositiveRegulation activeUnit +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.