Reactome: A Curated Pathway Database

Attributes of class 'ProteinDrug'

Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
authored 1 INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
cellType 1 INSTANCE CellType PhysicalEntity ALL INTEGER(10) UNSIGNED
compartment + INSTANCE EntityCompartment PhysicalEntity ALL INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
crossReference + INSTANCE DatabaseIdentifier PhysicalEntity   INTEGER(10) UNSIGNED
definition 1 TEXT N/A PhysicalEntity   TEXT
disease + INSTANCE Disease PhysicalEntity ALL INTEGER(10) UNSIGNED
edited + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
figure + INSTANCE Figure PhysicalEntity   INTEGER(10) UNSIGNED
goCellularComponent 1 INSTANCE GO_CellularComponent PhysicalEntity   INTEGER(10) UNSIGNED
inferredFrom + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
inferredTo + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
literatureReference + INSTANCE Publication PhysicalEntity   INTEGER(10) UNSIGNED
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
name + TEXT N/A PhysicalEntity   TEXT
referenceEntity 1 INSTANCE ReferenceGeneProduct ProteinDrug ALL INTEGER(10) UNSIGNED
referenceTherapeutic 1 INSTANCE ReferenceTherapeutic Drug ALL INTEGER(10) UNSIGNED
reviewed + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
revised + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED
summation + INSTANCE Summation PhysicalEntity   INTEGER(10) UNSIGNED
systematicName 1 TEXT N/A PhysicalEntity   TEXT

Referers of class 'ProteinDrug' instances

Class name Attribute name Cardinality
CandidateSet hasCandidate +
Complex inferredTo +
Drug inferredTo +
EntitySet inferredTo +
EntityWithAccessionedSequence inferredTo +
SimpleEntity inferredTo +
ProteinDrug inferredTo +
Polymer inferredTo +
DefinedSet inferredTo +
CandidateSet inferredTo +
RNADrug inferredTo +
OpenSet inferredTo +
PhysicalEntity inferredTo +
OtherEntity inferredTo +
GenomeEncodedEntity inferredTo +
ChemicalDrug inferredTo +
FailedReaction output +
Reaction output +
Polymerisation output +
ReactionlikeEvent output +
BlackBoxEvent output +
Depolymerisation output +
NegativeGeneExpressionRegulation activeUnit +
PositiveGeneExpressionRegulation activeUnit +
NegativeRegulation activeUnit +
Requirement activeUnit +
Regulation activeUnit +
CatalystActivity activeUnit +
PositiveRegulation activeUnit +
FailedReaction input +
Polymerisation input +
Reaction input +
Depolymerisation input +
BlackBoxEvent input +
ReactionlikeEvent input +
CatalystActivity physicalEntity 1
EntityFunctionalStatus physicalEntity 1
ConcurrentEventSet focusEntity +
EntityVertex representedInstance 1
VertexSearchableTerm termProvider +
NegativeGeneExpressionRegulation regulator 1
NegativeRegulation regulator 1
PositiveGeneExpressionRegulation regulator 1
Requirement regulator 1
PositiveRegulation regulator 1
Regulation regulator 1
Polymer repeatedUnit +
Reaction entityOnOtherCell +
Polymerisation entityOnOtherCell +
FailedReaction entityOnOtherCell +
BlackBoxEvent entityOnOtherCell +
ReactionlikeEvent entityOnOtherCell +
Depolymerisation entityOnOtherCell +
Complex entityOnOtherCell +
_Deleted replacementInstances +
Complex hasComponent +
FailedReaction requiredInputComponent +
Reaction requiredInputComponent +
Polymerisation requiredInputComponent +
Depolymerisation requiredInputComponent +
ReactionlikeEvent requiredInputComponent +
BlackBoxEvent requiredInputComponent +
CandidateSet inferredFrom +
DefinedSet inferredFrom +
Polymer inferredFrom +
EntityWithAccessionedSequence inferredFrom +
SimpleEntity inferredFrom +
ProteinDrug inferredFrom +
Drug inferredFrom +
Complex inferredFrom +
EntitySet inferredFrom +
GenomeEncodedEntity inferredFrom +
PhysicalEntity inferredFrom +
OtherEntity inferredFrom +
ChemicalDrug inferredFrom +
OpenSet inferredFrom +
RNADrug inferredFrom +
OpenSet hasMember +
EntitySet hasMember +
CandidateSet hasMember +
DefinedSet hasMember +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.