Reactome: A Curated Pathway Database

Attributes of class 'Polymer'

Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
authored 1 INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
cellType 1 INSTANCE CellType PhysicalEntity ALL INTEGER(10) UNSIGNED
compartment + INSTANCE EntityCompartment PhysicalEntity   INTEGER(10) UNSIGNED
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
crossReference + INSTANCE DatabaseIdentifier PhysicalEntity   INTEGER(10) UNSIGNED
definition 1 TEXT N/A PhysicalEntity   TEXT
disease + INSTANCE Disease PhysicalEntity   INTEGER(10) UNSIGNED
edited + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
figure + INSTANCE Figure PhysicalEntity   INTEGER(10) UNSIGNED
goCellularComponent 1 INSTANCE GO_CellularComponent PhysicalEntity   INTEGER(10) UNSIGNED
inferredFrom + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
inferredProt 1 TEXT N/A Polymer   TEXT
inferredTo + INSTANCE PhysicalEntity PhysicalEntity   INTEGER(10) UNSIGNED
literatureReference + INSTANCE Publication PhysicalEntity   INTEGER(10) UNSIGNED
maxHomologues 1 TEXT N/A Polymer   TEXT
maxUnitCount 1 INTEGER N/A Polymer   INTEGER(10)
minUnitCount 1 INTEGER N/A Polymer   INTEGER(10)
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
name + TEXT N/A PhysicalEntity   TEXT
repeatedUnit + INSTANCE PhysicalEntity Polymer ALL INTEGER(10) UNSIGNED
reviewed + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
revised + INSTANCE InstanceEdit PhysicalEntity   INTEGER(10) UNSIGNED
species + INSTANCE Species Polymer   INTEGER(10) UNSIGNED
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED
summation + INSTANCE Summation PhysicalEntity   INTEGER(10) UNSIGNED
systematicName 1 TEXT N/A PhysicalEntity   TEXT
totalProt 1 TEXT N/A Polymer   TEXT

Referers of class 'Polymer' instances

Class name Attribute name Cardinality
Complex hasComponent +
_Deleted replacementInstances +
EntityFunctionalStatus physicalEntity 1
CatalystActivity physicalEntity 1
Reaction entityOnOtherCell +
Complex entityOnOtherCell +
BlackBoxEvent entityOnOtherCell +
Polymerisation entityOnOtherCell +
FailedReaction entityOnOtherCell +
ReactionlikeEvent entityOnOtherCell +
Depolymerisation entityOnOtherCell +
VertexSearchableTerm termProvider +
OpenSet hasMember +
DefinedSet hasMember +
EntitySet hasMember +
CandidateSet hasMember +
PositiveRegulation regulator 1
Regulation regulator 1
NegativeGeneExpressionRegulation regulator 1
PositiveGeneExpressionRegulation regulator 1
Requirement regulator 1
NegativeRegulation regulator 1
ReactionlikeEvent input +
Depolymerisation input +
BlackBoxEvent input +
Polymerisation input +
FailedReaction input +
Reaction input +
PositiveGeneExpressionRegulation activeUnit +
NegativeGeneExpressionRegulation activeUnit +
Regulation activeUnit +
PositiveRegulation activeUnit +
NegativeRegulation activeUnit +
Requirement activeUnit +
CatalystActivity activeUnit +
EntityVertex representedInstance 1
CandidateSet hasCandidate +
Reaction requiredInputComponent +
BlackBoxEvent requiredInputComponent +
Polymerisation requiredInputComponent +
FailedReaction requiredInputComponent +
Depolymerisation requiredInputComponent +
ReactionlikeEvent requiredInputComponent +
ConcurrentEventSet focusEntity +
IntraChainCrosslinkedResidue modification 1
CrosslinkedResidue modification 1
GroupModifiedResidue modification 1
InterChainCrosslinkedResidue modification 1
OpenSet inferredTo +
PhysicalEntity inferredTo +
RNADrug inferredTo +
DefinedSet inferredTo +
Polymer inferredTo +
EntitySet inferredTo +
SimpleEntity inferredTo +
GenomeEncodedEntity inferredTo +
EntityWithAccessionedSequence inferredTo +
ProteinDrug inferredTo +
ChemicalDrug inferredTo +
Drug inferredTo +
OtherEntity inferredTo +
CandidateSet inferredTo +
Complex inferredTo +
FailedReaction output +
Polymerisation output +
BlackBoxEvent output +
ReactionlikeEvent output +
Depolymerisation output +
Reaction output +
Polymer repeatedUnit +
EntityWithAccessionedSequence inferredFrom +
ProteinDrug inferredFrom +
ChemicalDrug inferredFrom +
Drug inferredFrom +
OtherEntity inferredFrom +
CandidateSet inferredFrom +
Complex inferredFrom +
OpenSet inferredFrom +
PhysicalEntity inferredFrom +
RNADrug inferredFrom +
DefinedSet inferredFrom +
Polymer inferredFrom +
EntitySet inferredFrom +
SimpleEntity inferredFrom +
GenomeEncodedEntity inferredFrom +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.