Reactome: A Curated Pathway Database

Attributes of class 'DatabaseIdentifier'

Attribute name Cardinality Value type Allowed classes Attribute origin Value defines instance Db column type
DB_ID 1 INTERNAL_ID N/A DatabaseObject   INTEGER(10) UNSIGNED
_displayName 1 TEXT N/A DatabaseObject   TEXT
_timestamp 1 OTHER N/A DatabaseObject   TIMESTAMP
created 1 INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
crossReference + INSTANCE DatabaseIdentifier DatabaseIdentifier   INTEGER(10) UNSIGNED
identifier 1 TEXT N/A DatabaseIdentifier ALL varchar(20)
modified + INSTANCE InstanceEdit DatabaseObject   INTEGER(10) UNSIGNED
referenceDatabase 1 INSTANCE ReferenceDatabase DatabaseIdentifier ALL INTEGER(10) UNSIGNED
stableIdentifier 1 INSTANCE StableIdentifier DatabaseObject   INTEGER(10) UNSIGNED

Referers of class 'DatabaseIdentifier' instances

Class name Attribute name Cardinality
ReferenceDNASequence crossReference +
CandidateSet crossReference +
ReferenceIsoform crossReference +
Taxon crossReference +
Polymerisation crossReference +
ReferenceGroup crossReference +
EntitySet crossReference +
Reaction crossReference +
Depolymerisation crossReference +
BlackBoxEvent crossReference +
OtherEntity crossReference +
FailedReaction crossReference +
OpenSet crossReference +
Species crossReference +
SimpleEntity crossReference +
Pathway crossReference +
Event crossReference +
Polymer crossReference +
ReactionlikeEvent crossReference +
ReferenceGeneProduct crossReference +
ReferenceEntity crossReference +
ReferenceRNASequence crossReference +
ReferenceSequence crossReference +
ReferenceMolecule crossReference +
PhysicalEntity crossReference +
Complex crossReference +
Person crossReference +
DatabaseIdentifier crossReference +
DefinedSet crossReference +
GenomeEncodedEntity crossReference +
EntityWithAccessionedSequence crossReference +
VertexSearchableTerm termProvider +

You can find documentation for the Reactome data model here.

Sidebar on the left shows the hierarchy of Reactome classes. The number of instances of this class is shown in square brackets and is hyperlinked to a page listing all instances in this class.

The main panel shows attributes of the selected class. Own attributes, i.e. the ones which are not inherited from a parent class are indicated in colour.

'+' in 'Cardinality' column indicates that this is a multi-value attribute.

'Value defines instance' column indicates the attributes the values of which determine instance identity and are used to check if an identical instance has been stored in the database already. 'ALL' indicates that that all of the values of a given attribute must be identical while 'ANY' shows that identity of any single value of a given attribute is enough. Of course, if the identity is defined by multiple attributes each of them has to match.